No.
Definition
Score (bits)
E Value
1 ref|NM_001057680.1| Oryza sativa (japonica cultivar-group) Os03g...
581
e-162
2 dbj|AK099970.1| Oryza sativa (japonica cultivar-group) cDNA clon...
581
e-162
3 dbj|AK068717.1| Oryza sativa (japonica cultivar-group) cDNA clon...
581
e-162
4 emb|CT831245.1| Oryza sativa (indica cultivar-group) cDNA clone:...
377
e-101
5 gb|AY109821.1| Zea mays CL36095_1 mRNA sequence
319
1e-83
6 gb|AC135956.6| Oryza sativa (japonica cultivar-group) chromosome...
226
2e-55
7 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
226
2e-55
8 dbj|AB236150.1| Achaearanea tepidariorum At-sim mRNA for Single ...
46
0.33
9 emb|CR391994.10| Zebrafish DNA sequence from clone DKEY-239B22, ...
46
0.33
10 emb|CR339063.8| Zebrafish DNA sequence from clone CH211-247J10 i...
46
0.33
11 emb|AL928723.5| Zebrafish DNA sequence from clone DKEY-252I9 in ...
46
0.33
12 emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in ...
46
0.33
13 gb|CP000454.1| Arthrobacter sp. FB24, complete genome
44
1.3
14 gb|AC111028.10| Mus musculus chromosome 8, clone RP23-221P20, co...
44
1.3
15 gb|AC131921.9| Mus musculus chromosome 12, clone RP24-231P11, co...
44
1.3
16 ref|NM_001002973.1| Canis familiaris basic helix-loop-helix doma...
44
1.3
17 gb|AY204567.1| Canis familiaris SHARP1 protein (SHARP1) gene, co...
44
1.3
18 gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence
44
1.3
19 emb|AL160155.19| Human DNA sequence from clone RP11-461N23 on ch...
44
1.3
20 emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ...
44
1.3
21 gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Pa...
44
1.3
22 emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chro...
44
1.3
23 emb|CT832255.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
5.1
24 emb|CT832254.1| Oryza sativa (indica cultivar-group) cDNA clone:...
42
5.1
25 ref|NM_001070316.1| Oryza sativa (japonica cultivar-group) Os09g...
42
5.1
26 ref|NM_001066169.1| Oryza sativa (japonica cultivar-group) Os07g...
42
5.1
27 ref|NM_001062036.1| Oryza sativa (japonica cultivar-group) Os05g...
42
5.1
28 ref|NM_001055748.1| Oryza sativa (japonica cultivar-group) Os03g...
42
5.1
29 ref|XM_520805.2| PREDICTED: Pan troglodytes basic helix-loop-hel...
42
5.1
30 ref|XM_001098355.1| PREDICTED: Macaca mulatta similar to basic h...
42
5.1
31 gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
42
5.1
32 gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
42
5.1
33 gb|AY665466.1| Homo sapiens clone A10-B11 basic helix-loop-helix...
42
5.1
34 gb|AY665467.1| Homo sapiens clone D11-G10 basic helix-loop-helix...
42
5.1
35 gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome...
42
5.1
36 gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, comp...
42
5.1
37 ref|NM_001030484.1| Xenopus tropicalis heat shock 90kDa protein ...
42
5.1
38 ref|XM_754756.1| Ustilago maydis 521 hypothetical protein (UM037...
42
5.1
39 gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
42
5.1
40 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
41 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
42 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
43 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
44 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
45 emb|AL591543.22| Human DNA sequence from clone RP13-198D9 on chr...
42
5.1
46 dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
47 emb|BX571885.7| Mouse DNA sequence from clone RP23-17O21 on chro...
42
5.1
48 gb|AF274582.1|AF274582 Giardia intestinalis heat shock protein 7...
42
5.1
49 gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, comple...
42
5.1
50 dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
51 dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
52 dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
53 gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete s...
42
5.1
54 gb|AC022509.21|AC022509 Homo sapiens 12 BAC RP11-283G6 (Roswell ...
42
5.1
55 emb|CR615693.1| full-length cDNA clone CS0DE013YK10 of Placenta ...
42
5.1
56 gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, comple...
42
5.1
57 dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic D...
42
5.1
58 dbj|AK120117.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.1
59 dbj|AK108282.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.1
60 dbj|AK105352.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.1
61 dbj|AK104169.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.1
62 dbj|AK099324.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.1
63 dbj|AK071730.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
5.1
64 gb|AY106384.1| Zea mays PCO086002 mRNA sequence
42
5.1
65 gb|AC166329.3| Pan troglodytes BAC clone CH251-143I6 from chromo...
42
5.1
66 emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769...
42
5.1
67 gb|BC025968.1| Homo sapiens basic helix-loop-helix domain contai...
42
5.1
68 ref|XM_762032.1| Giardia lamblia ATCC 50803 heat shock protein 7...
42
5.1
69 dbj|AB067649.1| Giardia intestinalis dnaK mRNA for mitochondrial...
42
5.1
70 dbj|AB056659.1| Giardia intestinalis gene for mitochondrial type...
42
5.1
71 gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome...
42
5.1
72 ref|NM_030762.1| Homo sapiens basic helix-loop-helix domain cont...
42
5.1
>ref|NM_001057680.1 | Oryza sativa (japonica cultivar-group) Os03g0728100 (Os03g0728100)
mRNA, complete cds
Length = 1528
Score = 581 bits (293), Expect = e-162
Identities = 565/655 (86%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 305 gcggccttccaaggcctgggggctgctcgtcttcggcctcgtcggcgccgccgccgcgac 364
|||||| |||||||| |||||| | ||| ||||||||||| |||||||| || |||| ||
Sbjct: 484 gcggccgtccaaggcgtgggggatcctcatcttcggcctcatcggcgccaccaccgccac 543
Query: 365 cctcgcggttgcccacgttcggaaaagtgttgattggttctacactcagctgaataaggt 424
| |||||||||| || ||||| | ||||||||||||| |||||| |||| | |||||| |
Sbjct: 544 cttcgcggttgctcaagttcgcagaagtgttgattgggtctacagtcagttcaataagat 603
Query: 425 gcagacaacagcatcttggaggaaggcaagtaaaagctccaccggtggaacttttagtga 484
|||||||||| ||||||||||| |||||||| ||||| | | |||||| ||| |||||
Sbjct: 604 gcagacaaca---tcttggaggaatgcaagtaacagctctaaccgtggaagtttcagtga 660
Query: 485 cgatgccaggagaagatattatcaacgtatgcagcaggaatttgaggatgaacaggaaag 544
||||| |||||||||||||| ||||||||||| ||||||| |||||| ||||| || ||
Sbjct: 661 ggatgctaggagaagatattaccaacgtatgcaacaggaatatgaggaggaacaagagag 720
Query: 545 agttcaaagaataaggcacatgcaaagtgttttcaaccgagagaggaacaaattcaggaa 604
||||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 721 agttcaaagaataagacacatgcaaagtgttttcaacagagagaggaacaagtttaggag 780
Query: 605 aagttatgaaagttggaaggagaatgggcccccaggtggatataattacatcccgcggga 664
|||||||||| ||||| ||||||||| || ||||||||||||||||| |||| |||||
Sbjct: 781 aagttatgaagcttggagggagaatggccctccaggtggatataattatgtcccacggga 840
Query: 665 tgactggtattggcagacagatacgcctaactcggaaaataaaaataggcggacatatac 724
|||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 841 cgactggtactggcagacagatacatcacactcggaacataaaaataggcggacatatac 900
Query: 725 tccggcaggacctaggggttaccctatgtcacatcattacaccgttcttggtcttgatag 784
||| ||||||||||||| || ||||||||||||| || || || |||||||| ||||
Sbjct: 901 tcctgcaggacctagggtgtattctatgtcacatcactatacagtccttggtctcaatag 960
Query: 785 atcacgagggactccatacacagatgcagaagtaaagagtgcttttagaacaaaagcaat 844
||||| || |||||||| || |||||||| |||| |||||||||||||||||||||
Sbjct: 961 gtcacggacaacaccatacaccgacgcagaagtcaagaatgcttttagaacaaaagcaat 1020
Query: 845 ggaggtccaccctgaccaaaatcaagataatagagagactgctgaagaagagttcaagga 904
|||||| |||||||| ||||||||||||||||||||| |||| ||||| ||| |||||
Sbjct: 1021 ggaggttcaccctgatcaaaatcaagataatagagaggctgcagaagagaggtttaagga 1080
Query: 905 ggttgtcaaatcttacgaggcaataaaactggagaggaaaaataatgcaagttga 959
|||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 1081 ggttgtcaaatcatacgaagcaataaaactggagagaaaaaatgatgcaagttga 1135
Score = 61.9 bits (31), Expect = 6e-06
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 1124 tgggagcacacgtccctgatgtagaagtaggatattgtcgacaaagatacaaaag 1178
|||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||
Sbjct: 1294 tgggagcacacggccctgatgtag-actaggatattgtcgacaaaggtgcaaaag 1347
Score = 46.1 bits (23), Expect = 0.33
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 169 ggggaagcatgagcctggcctcccgcggcccccggcgtcgagctcgaatcg 219
|||||||||||||| ||||||||| || || | ||||||||||||||||
Sbjct: 327 ggggaagcatgagcttggcctcccacgcgcctagccgtcgagctcgaatcg 377
>dbj|AK099970.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013127L17, full
insert sequence
Length = 1439
Score = 581 bits (293), Expect = e-162
Identities = 565/655 (86%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 305 gcggccttccaaggcctgggggctgctcgtcttcggcctcgtcggcgccgccgccgcgac 364
|||||| |||||||| |||||| | ||| ||||||||||| |||||||| || |||| ||
Sbjct: 449 gcggccgtccaaggcgtgggggatcctcatcttcggcctcatcggcgccaccaccgccac 508
Query: 365 cctcgcggttgcccacgttcggaaaagtgttgattggttctacactcagctgaataaggt 424
| |||||||||| || ||||| | ||||||||||||| |||||| |||| | |||||| |
Sbjct: 509 cttcgcggttgctcaagttcgcagaagtgttgattgggtctacagtcagttcaataagat 568
Query: 425 gcagacaacagcatcttggaggaaggcaagtaaaagctccaccggtggaacttttagtga 484
|||||||||| ||||||||||| |||||||| ||||| | | |||||| ||| |||||
Sbjct: 569 gcagacaaca---tcttggaggaatgcaagtaacagctctaaccgtggaagtttcagtga 625
Query: 485 cgatgccaggagaagatattatcaacgtatgcagcaggaatttgaggatgaacaggaaag 544
||||| |||||||||||||| ||||||||||| ||||||| |||||| ||||| || ||
Sbjct: 626 ggatgctaggagaagatattaccaacgtatgcaacaggaatatgaggaggaacaagagag 685
Query: 545 agttcaaagaataaggcacatgcaaagtgttttcaaccgagagaggaacaaattcaggaa 604
||||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 686 agttcaaagaataagacacatgcaaagtgttttcaacagagagaggaacaagtttaggag 745
Query: 605 aagttatgaaagttggaaggagaatgggcccccaggtggatataattacatcccgcggga 664
|||||||||| ||||| ||||||||| || ||||||||||||||||| |||| |||||
Sbjct: 746 aagttatgaagcttggagggagaatggccctccaggtggatataattatgtcccacggga 805
Query: 665 tgactggtattggcagacagatacgcctaactcggaaaataaaaataggcggacatatac 724
|||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 806 cgactggtactggcagacagatacatcacactcggaacataaaaataggcggacatatac 865
Query: 725 tccggcaggacctaggggttaccctatgtcacatcattacaccgttcttggtcttgatag 784
||| ||||||||||||| || ||||||||||||| || || || |||||||| ||||
Sbjct: 866 tcctgcaggacctagggtgtattctatgtcacatcactatacagtccttggtctcaatag 925
Query: 785 atcacgagggactccatacacagatgcagaagtaaagagtgcttttagaacaaaagcaat 844
||||| || |||||||| || |||||||| |||| |||||||||||||||||||||
Sbjct: 926 gtcacggacaacaccatacaccgacgcagaagtcaagaatgcttttagaacaaaagcaat 985
Query: 845 ggaggtccaccctgaccaaaatcaagataatagagagactgctgaagaagagttcaagga 904
|||||| |||||||| ||||||||||||||||||||| |||| ||||| ||| |||||
Sbjct: 986 ggaggttcaccctgatcaaaatcaagataatagagaggctgcagaagagaggtttaagga 1045
Query: 905 ggttgtcaaatcttacgaggcaataaaactggagaggaaaaataatgcaagttga 959
|||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 1046 ggttgtcaaatcatacgaagcaataaaactggagagaaaaaatgatgcaagttga 1100
Score = 61.9 bits (31), Expect = 6e-06
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 1124 tgggagcacacgtccctgatgtagaagtaggatattgtcgacaaagatacaaaag 1178
|||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||
Sbjct: 1260 tgggagcacacggccctgatgtag-actaggatattgtcgacaaaggtgcaaaag 1313
Score = 46.1 bits (23), Expect = 0.33
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 169 ggggaagcatgagcctggcctcccgcggcccccggcgtcgagctcgaatcg 219
|||||||||||||| ||||||||| || || | ||||||||||||||||
Sbjct: 292 ggggaagcatgagcttggcctcccacgcgcctagccgtcgagctcgaatcg 342
>dbj|AK068717.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013163H12, full
insert sequence
Length = 1528
Score = 581 bits (293), Expect = e-162
Identities = 565/655 (86%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 305 gcggccttccaaggcctgggggctgctcgtcttcggcctcgtcggcgccgccgccgcgac 364
|||||| |||||||| |||||| | ||| ||||||||||| |||||||| || |||| ||
Sbjct: 485 gcggccgtccaaggcgtgggggatcctcatcttcggcctcatcggcgccaccaccgccac 544
Query: 365 cctcgcggttgcccacgttcggaaaagtgttgattggttctacactcagctgaataaggt 424
| |||||||||| || ||||| | ||||||||||||| |||||| |||| | |||||| |
Sbjct: 545 cttcgcggttgctcaagttcgcagaagtgttgattgggtctacagtcagttcaataagat 604
Query: 425 gcagacaacagcatcttggaggaaggcaagtaaaagctccaccggtggaacttttagtga 484
|||||||||| ||||||||||| |||||||| ||||| | | |||||| ||| |||||
Sbjct: 605 gcagacaaca---tcttggaggaatgcaagtaacagctctaaccgtggaagtttcagtga 661
Query: 485 cgatgccaggagaagatattatcaacgtatgcagcaggaatttgaggatgaacaggaaag 544
||||| |||||||||||||| ||||||||||| ||||||| |||||| ||||| || ||
Sbjct: 662 ggatgctaggagaagatattaccaacgtatgcaacaggaatatgaggaggaacaagagag 721
Query: 545 agttcaaagaataaggcacatgcaaagtgttttcaaccgagagaggaacaaattcaggaa 604
||||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||
Sbjct: 722 agttcaaagaataagacacatgcaaagtgttttcaacagagagaggaacaagtttaggag 781
Query: 605 aagttatgaaagttggaaggagaatgggcccccaggtggatataattacatcccgcggga 664
|||||||||| ||||| ||||||||| || ||||||||||||||||| |||| |||||
Sbjct: 782 aagttatgaagcttggagggagaatggccctccaggtggatataattatgtcccacggga 841
Query: 665 tgactggtattggcagacagatacgcctaactcggaaaataaaaataggcggacatatac 724
|||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 842 cgactggtactggcagacagatacatcacactcggaacataaaaataggcggacatatac 901
Query: 725 tccggcaggacctaggggttaccctatgtcacatcattacaccgttcttggtcttgatag 784
||| ||||||||||||| || ||||||||||||| || || || |||||||| ||||
Sbjct: 902 tcctgcaggacctagggtgtattctatgtcacatcactatacagtccttggtctcaatag 961
Query: 785 atcacgagggactccatacacagatgcagaagtaaagagtgcttttagaacaaaagcaat 844
||||| || |||||||| || |||||||| |||| |||||||||||||||||||||
Sbjct: 962 gtcacggacaacaccatacaccgacgcagaagtcaagaatgcttttagaacaaaagcaat 1021
Query: 845 ggaggtccaccctgaccaaaatcaagataatagagagactgctgaagaagagttcaagga 904
|||||| |||||||| ||||||||||||||||||||| |||| ||||| ||| |||||
Sbjct: 1022 ggaggttcaccctgatcaaaatcaagataatagagaggctgcagaagagaggtttaagga 1081
Query: 905 ggttgtcaaatcttacgaggcaataaaactggagaggaaaaataatgcaagttga 959
|||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 1082 ggttgtcaaatcatacgaagcaataaaactggagagaaaaaatgatgcaagttga 1136
Score = 61.9 bits (31), Expect = 6e-06
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 1124 tgggagcacacgtccctgatgtagaagtaggatattgtcgacaaagatacaaaag 1178
|||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||
Sbjct: 1294 tgggagcacacggccctgatgtag-actaggatattgtcgacaaaggtgcaaaag 1347
Score = 46.1 bits (23), Expect = 0.33
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 169 ggggaagcatgagcctggcctcccgcggcccccggcgtcgagctcgaatcg 219
|||||||||||||| ||||||||| || || | ||||||||||||||||
Sbjct: 328 ggggaagcatgagcttggcctcccacgcgcctagccgtcgagctcgaatcg 378
>gb|AC135956.6 | Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0005H20, complete sequence
Length = 135560
Score = 226 bits (114), Expect = 2e-55
Identities = 201/230 (87%)
Strand = Plus / Minus
Query: 549 caaagaataaggcacatgcaaagtgttttcaaccgagagaggaacaaattcaggaaaagt 608
||||||||||| ||||||||||||||||||||| ||||||||||||| || |||| ||||
Sbjct: 52560 caaagaataagacacatgcaaagtgttttcaacagagagaggaacaagtttaggagaagt 52501
Query: 609 tatgaaagttggaaggagaatgggcccccaggtggatataattacatcccgcgggatgac 668
|||||| ||||| ||||||||| || ||||||||||||||||| |||| ||||| |||
Sbjct: 52500 tatgaagcttggagggagaatggccctccaggtggatataattatgtcccacgggacgac 52441
Query: 669 tggtattggcagacagatacgcctaactcggaaaataaaaataggcggacatatactccg 728
||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||
Sbjct: 52440 tggtactggcagacagatacatcacactcggaacataaaaataggcggacatatactcct 52381
Query: 729 gcaggacctaggggttaccctatgtcacatcattacaccgttcttggtct 778
||||||||||||| || ||||||||||||| || || || ||||||||
Sbjct: 52380 gcaggacctagggtgtattctatgtcacatcactatacagtccttggtct 52331
Score = 107 bits (54), Expect = 1e-19
Identities = 113/132 (85%), Gaps = 3/132 (2%)
Strand = Plus / Minus
Query: 417 aataaggtgcagacaacagcatcttggaggaaggcaagtaaaagctccaccggtggaact 476
|||||| ||||||||||| ||||||||||| |||||||| ||||| | | |||||| |
Sbjct: 52980 aataagatgcagacaaca---tcttggaggaatgcaagtaacagctctaaccgtggaagt 52924
Query: 477 tttagtgacgatgccaggagaagatattatcaacgtatgcagcaggaatttgaggatgaa 536
|| ||||| ||||| |||||||||||||| ||||||||||| ||||||| |||||| |||
Sbjct: 52923 ttcagtgaggatgctaggagaagatattaccaacgtatgcaacaggaatatgaggaggaa 52864
Query: 537 caggaaagagtt 548
|| || ||||||
Sbjct: 52863 caagagagagtt 52852
Score = 95.6 bits (48), Expect = 4e-16
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 824 tgcttttagaacaaaagcaatggaggtccaccctgaccaaaatcaagataatagag 879
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 50338 tgcttttagaacaaaagcaatggaggttcaccctgatcaaaatcaagataatagag 50283
Score = 87.7 bits (44), Expect = 1e-13
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 900 aaggaggttgtcaaatcttacgaggcaataaaactggagaggaaaaataatgcaagttga 959
||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 50163 aaggaggttgtcaaatcatacgaagcaataaaactggagagaaaaaatgatgcaagttga 50104
Score = 61.9 bits (31), Expect = 6e-06
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 1124 tgggagcacacgtccctgatgtagaagtaggatattgtcgacaaagatacaaaag 1178
|||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||
Sbjct: 49945 tgggagcacacggccctgatgtag-actaggatattgtcgacaaaggtgcaaaag 49892
Score = 58.0 bits (29), Expect = 9e-05
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 305 gcggccttccaaggcctgggggctgctcgtcttcggcctcgtcggcgccgccgccgcgac 364
|||||| |||||||| |||||| | ||| ||||||||||| |||||||| || |||| ||
Sbjct: 54844 gcggccgtccaaggcgtgggggatcctcatcttcggcctcatcggcgccaccaccgccac 54785
Query: 365 cctcgcggt 373
| |||||||
Sbjct: 54784 cttcgcggt 54776
Score = 46.1 bits (23), Expect = 0.33
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 169 ggggaagcatgagcctggcctcccgcggcccccggcgtcgagctcgaatcg 219
|||||||||||||| ||||||||| || || | ||||||||||||||||
Sbjct: 55001 ggggaagcatgagcttggcctcccacgcgcctagccgtcgagctcgaatcg 54951
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
Length = 36192742
Score = 226 bits (114), Expect = 2e-55
Identities = 201/230 (87%)
Strand = Plus / Plus
Query: 549 caaagaataaggcacatgcaaagtgttttcaaccgagagaggaacaaattcaggaaaagt 608
||||||||||| ||||||||||||||||||||| ||||||||||||| || |||| ||||
Sbjct: 29524832 caaagaataagacacatgcaaagtgttttcaacagagagaggaacaagtttaggagaagt 29524891
Query: 609 tatgaaagttggaaggagaatgggcccccaggtggatataattacatcccgcgggatgac 668
|||||| ||||| ||||||||| || ||||||||||||||||| |||| ||||| |||
Sbjct: 29524892 tatgaagcttggagggagaatggccctccaggtggatataattatgtcccacgggacgac 29524951
Query: 669 tggtattggcagacagatacgcctaactcggaaaataaaaataggcggacatatactccg 728
||||| |||||||||||||| | |||||||| |||||||||||||||||||||||||
Sbjct: 29524952 tggtactggcagacagatacatcacactcggaacataaaaataggcggacatatactcct 29525011
Query: 729 gcaggacctaggggttaccctatgtcacatcattacaccgttcttggtct 778
||||||||||||| || ||||||||||||| || || || ||||||||
Sbjct: 29525012 gcaggacctagggtgtattctatgtcacatcactatacagtccttggtct 29525061
Score = 107 bits (54), Expect = 1e-19
Identities = 113/132 (85%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 417 aataaggtgcagacaacagcatcttggaggaaggcaagtaaaagctccaccggtggaact 476
|||||| ||||||||||| ||||||||||| |||||||| ||||| | | |||||| |
Sbjct: 29524412 aataagatgcagacaaca---tcttggaggaatgcaagtaacagctctaaccgtggaagt 29524468
Query: 477 tttagtgacgatgccaggagaagatattatcaacgtatgcagcaggaatttgaggatgaa 536
|| ||||| ||||| |||||||||||||| ||||||||||| ||||||| |||||| |||
Sbjct: 29524469 ttcagtgaggatgctaggagaagatattaccaacgtatgcaacaggaatatgaggaggaa 29524528
Query: 537 caggaaagagtt 548
|| || ||||||
Sbjct: 29524529 caagagagagtt 29524540
Score = 95.6 bits (48), Expect = 4e-16
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 824 tgcttttagaacaaaagcaatggaggtccaccctgaccaaaatcaagataatagag 879
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 29527054 tgcttttagaacaaaagcaatggaggttcaccctgatcaaaatcaagataatagag 29527109
Score = 87.7 bits (44), Expect = 1e-13
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 900 aaggaggttgtcaaatcttacgaggcaataaaactggagaggaaaaataatgcaagttga 959
||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 29527229 aaggaggttgtcaaatcatacgaagcaataaaactggagagaaaaaatgatgcaagttga 29527288
Score = 61.9 bits (31), Expect = 6e-06
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 1124 tgggagcacacgtccctgatgtagaagtaggatattgtcgacaaagatacaaaag 1178
|||||||||||| ||||||||||| | ||||||||||||||||||| | ||||||
Sbjct: 29527447 tgggagcacacggccctgatgtag-actaggatattgtcgacaaaggtgcaaaag 29527500
Score = 58.0 bits (29), Expect = 9e-05
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 305 gcggccttccaaggcctgggggctgctcgtcttcggcctcgtcggcgccgccgccgcgac 364
|||||| |||||||| |||||| | ||| ||||||||||| |||||||| || |||| ||
Sbjct: 29522548 gcggccgtccaaggcgtgggggatcctcatcttcggcctcatcggcgccaccaccgccac 29522607
Query: 365 cctcgcggt 373
| |||||||
Sbjct: 29522608 cttcgcggt 29522616
Score = 46.1 bits (23), Expect = 0.33
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 169 ggggaagcatgagcctggcctcccgcggcccccggcgtcgagctcgaatcg 219
|||||||||||||| ||||||||| || || | ||||||||||||||||
Sbjct: 29522391 ggggaagcatgagcttggcctcccacgcgcctagccgtcgagctcgaatcg 29522441
Score = 42.1 bits (21), Expect = 5.1
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 340 gcctcgtcggcgccgccgccg 360
|||||||||||||||||||||
Sbjct: 4581761 gcctcgtcggcgccgccgccg 4581741
>emb|AL160155.19 | Human DNA sequence from clone RP11-461N23 on chromosome 13 Contains
part of a novel gene (FLJ30001), a H2A histone family,
pseudogene, the GPR18 gene for G protein-coupled receptor
18, the EBI2 gene for Epstein-Barr virus induced gene 2
(lymphocyte-specific G protein-coupled receptor), two
novel genes and a CpG island, complete sequence
Length = 149478
Score = 44.1 bits (22), Expect = 1.3
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1027 agcaggccatgccatcaggtgg 1048
||||||||||||||||||||||
Sbjct: 57459 agcaggccatgccatcaggtgg 57438
>ref|NM_030762.1 | Homo sapiens basic helix-loop-helix domain containing, class B, 3
(BHLHB3), mRNA
dbj|AB044088.1| Homo sapiens mRNA for bHLH protein DEC2, complete cds
Length = 3641
Score = 42.1 bits (21), Expect = 5.1
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 348 ggcgccgccgccgcgaccctc 368
|||||||||||||||||||||
Sbjct: 1413 ggcgccgccgccgcgaccctc 1433
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 244,900,032
Number of extensions: 14338145
Number of successful extensions: 297699
Number of sequences better than 10.0: 72
Number of HSP's gapped: 297676
Number of HSP's successfully gapped: 93
Length of query: 1351
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1328
Effective length of database: 18,503,978,556
Effective search space: 24573283522368
Effective search space used: 24573283522368
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)