ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf146p01 |
|---|---|
| Clone Library Name | barley_pub |
>Q7T046:RVXX_VIPLE Coagulation factor X-activating enzyme heavy chain precursor -| Vipera lebetina (Elephant snake) (Leventine viper) Length = 612 Score = 33.1 bits (74), Expect = 1.0 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = -2 Query: 361 HCFACTASCPALAYHTSRTPLLNRHRCGSIYHPGAPVAYRLCIWYFHKEST 209 HC +A CPA +H + P N + G Y+ P+ + CI F +T Sbjct: 473 HCTGQSAECPADGFHANGQPCQNNN--GYCYNGDCPIMTKQCISLFGSRAT 521
>P18563:ITB6_CAVPO Integrin beta-6 - Cavia porcellus (Guinea pig)| Length = 577 Score = 33.1 bits (74), Expect = 1.0 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 13/99 (13%) Frame = +1 Query: 244 CKQQVHQDGKYCHTC--AYSKGVCAM----------CGKQVLDTKLYKQSNV*VGCHGIA 387 C+++V + CH +Y GVCA CG+ L T K++ C G Sbjct: 315 CQKEVEVNSSKCHNGNGSYQCGVCACNPGHMGPHCECGEDTLSTDSCKETPDHPSCSGRG 374 Query: 388 SSYCQG*SCS-GPMFNM*FHNIMCSRYCCGKRWLYLCSE 501 YC C P N+ C + C + LC + Sbjct: 375 DCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGD 413
>Q68FU5:CI085_RAT Uncharacterized protein C9orf85 homolog - Rattus norvegicus (Rat)| Length = 155 Score = 33.1 bits (74), Expect = 1.0 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = +1 Query: 199 KKSRWTPYGNTK-CIICKQQVHQDGKY--CHTCAYSKGVCAMCGKQ 327 K S++ P K C+ C Q+ +D + C CA VCA CGK+ Sbjct: 57 KYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACKLEVCAKCGKE 102
>Q8WHX1:YCF1_PSINU Putative membrane protein ycf1 - Psilotum nudum (Whisk fern)| Length = 1703 Score = 32.7 bits (73), Expect = 1.3 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +1 Query: 115 IVPDKWKEGASNTFEGGGRKINEN---KLLSKKSRWTPYGNTKCIICKQQVHQDGKYC 279 IVP KWK ++ K+++N K L K+++++ Y + KQ+++ YC Sbjct: 1251 IVPQKWKNEVKKRWKSNTNKLDKNKEYKTLEKENKYSLYETNNML--KQRINNRNNYC 1306
>P60413:KR10C_HUMAN Keratin-associated protein 10-12 - Homo sapiens (Human)| Length = 245 Score = 32.7 bits (73), Expect = 1.3 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 6/88 (6%) Frame = +2 Query: 245 VSNRCTRMVNTATPVPIQKGCAR------CVVSKCWTRSCTSKAMCE*DAMALPARTVKD 406 VS+ C R+ T P P Q GC C S C CTS + + + +TV Sbjct: 58 VSSPCCRV--TCEPSPCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKTVCC 115 Query: 407 NHVVVLCLTCNFITSCARDIAVEKDGCI 490 V + + C +SC + + + CI Sbjct: 116 KPVCCMPVCCGPSSSCCQQSSCQPACCI 143
>Q9CQ90:CI085_MOUSE Uncharacterized protein C9orf85 homolog - Mus musculus (Mouse)| Length = 155 Score = 32.7 bits (73), Expect = 1.3 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = +1 Query: 199 KKSRWTPYGNTK-CIICKQQVHQDGKY--CHTCAYSKGVCAMCGKQ 327 K S++ P K C+ C Q+ +D + C CA VCA CGK+ Sbjct: 57 KYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102
>Q96MD7:CI085_HUMAN Uncharacterized protein C9orf85 - Homo sapiens (Human)| Length = 179 Score = 32.7 bits (73), Expect = 1.3 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Frame = +1 Query: 199 KKSRWTPYGNTK-CIICKQQVHQDGKY--CHTCAYSKGVCAMCGKQ 327 K S++ P K C+ C Q+ +D + C CA VCA CGK+ Sbjct: 57 KYSKYKPLSKPKKCVKCLQKTVKDSYHIMCRPCACELEVCAKCGKK 102
>Q9W6M5:ACLE_AGKAC Acutolysin-E precursor - Agkistrodon acutus (Hundred-pace snake)| (Deinagkistrodon acutus) Length = 609 Score = 32.7 bits (73), Expect = 1.3 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -2 Query: 361 HCFACTASCPALAYHTSRTPLLNRHRCGSIYHPGAPVAYRLCIWYFHKE 215 HC ++ CPA +H + P L+ + G Y+ P+ Y C F E Sbjct: 471 HCTGQSSECPADVFHKNGEPCLDNY--GYCYNGNCPIMYHQCYALFGAE 517
>P10354:CMGA_RAT Chromogranin-A precursor - Rattus norvegicus (Rat)| Length = 466 Score = 32.3 bits (72), Expect = 1.7 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Frame = +3 Query: 12 VKKDPDHQDLKE---------KPITSGGGGDGVHQMREEAGESDRAGQVEG----GRQQH 152 ++KD D Q + + + S G G+ H +EE GE AG +G G+ Q Sbjct: 278 IQKDDDGQSESQAVNGKTGASEAVPSEGKGELEHSQQEEDGEEAMAGPPQGLFPGGKGQE 337 Query: 153 LRGRRPQDQ*E*APLQEEQVDSLW 224 L ++ +++ E L E D W Sbjct: 338 LERKQQEEEEEEERLSREWEDKRW 361
>P30431:DISJ_BOTJA Venom metalloproteinase jararhagin precursor - Bothrops jararaca| (Jararaca) Length = 571 Score = 32.0 bits (71), Expect = 2.3 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -2 Query: 361 HCFACTASCPALAYHTSRTPLLNRHRCGSIYHPGAPVAYRLCIWYF 224 HC ++ CPA +H + P L+ + G Y+ P+ Y C F Sbjct: 433 HCTGQSSECPADVFHKNGQPCLDNY--GYCYNGNCPIMYHQCYALF 476
>Q5W8W0:TAAR6_PANTR Trace amine-associated receptor 6 - Pan troglodytes (Chimpanzee)| Length = 345 Score = 31.2 bits (69), Expect = 3.9 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +3 Query: 555 TLEQCGF*GLAFCCPGTLC---FCYPELFGLVFL 647 T+E C + G +FC T C FCY LF L F+ Sbjct: 93 TVESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFI 126
>Q96RI8:TAAR6_HUMAN Trace amine-associated receptor 6 - Homo sapiens (Human)| Length = 345 Score = 31.2 bits (69), Expect = 3.9 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +3 Query: 555 TLEQCGF*GLAFCCPGTLC---FCYPELFGLVFL 647 T+E C + G +FC T C FCY LF L F+ Sbjct: 93 TVESCWYFGRSFCTFHTCCDVAFCYSSLFHLCFI 126
>P18564:ITB6_HUMAN Integrin beta-6 precursor - Homo sapiens (Human)| Length = 788 Score = 31.2 bits (69), Expect = 3.9 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 13/97 (13%) Frame = +1 Query: 244 CKQQVHQDGKYCH--TCAYSKGVCAM----------CGKQVLDTKLYKQSNV*VGCHGIA 387 C+++V + CH ++ GVCA CG+ +L T K++ C G Sbjct: 456 CQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRG 515 Query: 388 SSYCQG*SCS-GPMFNM*FHNIMCSRYCCGKRWLYLC 495 YC C P N+ C + C + LC Sbjct: 516 DCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLC 552
>Q64NJ8:RPOC_BACFR DNA-directed RNA polymerase beta' chain - Bacteroides fragilis| Length = 1427 Score = 30.4 bits (67), Expect = 6.6 Identities = 27/99 (27%), Positives = 41/99 (41%) Frame = +1 Query: 76 MVCTKCEKKLGKVIVPDKWKEGASNTFEGGGRKINENKLLSKKSRWTPYGNTKCIICKQQ 255 ++ T E+ LG+V V D GG +I E+ ++KK + +P + + Sbjct: 832 VIATLYERILGRVSVHDIIHPQTGELLVAGGEEITED--IAKKIQESPIESVEI------ 883 Query: 256 VHQDGKYCHTCAYSKGVCAMCGKQVLDTKLYKQSNV*VG 372 + TC KGVCA C + L T Q VG Sbjct: 884 -----RSVLTCESKKGVCAKCYGRNLATNHMVQKGEAVG 917
>Q5L898:RPOC_BACFN DNA-directed RNA polymerase beta' chain - Bacteroides fragilis| (strain ATCC 25285 / NCTC 9343) Length = 1427 Score = 30.4 bits (67), Expect = 6.6 Identities = 27/99 (27%), Positives = 41/99 (41%) Frame = +1 Query: 76 MVCTKCEKKLGKVIVPDKWKEGASNTFEGGGRKINENKLLSKKSRWTPYGNTKCIICKQQ 255 ++ T E+ LG+V V D GG +I E+ ++KK + +P + + Sbjct: 832 VIATLYERILGRVSVHDIIHPQTGELLVAGGEEITED--IAKKIQESPIESVEI------ 883 Query: 256 VHQDGKYCHTCAYSKGVCAMCGKQVLDTKLYKQSNV*VG 372 + TC KGVCA C + L T Q VG Sbjct: 884 -----RSVLTCESKKGVCAKCYGRNLATNHMVQKGEAVG 917
>P41820:BFR1_SCHPO Brefeldin A resistance protein - Schizosaccharomyces pombe (Fission| yeast) Length = 1530 Score = 30.4 bits (67), Expect = 6.6 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -2 Query: 355 FACTASCPALAYHTSRTPLLNRHRCGSIYHPGAPVAYRLCI 233 F S +A S+ P++ +HR ++YHP A V L + Sbjct: 582 FCALQSLSEIANMFSQRPIIAKHRASALYHPAADVISSLIV 622
>Q8WWR8:NEUR4_HUMAN Sialidase-4 - Homo sapiens (Human)| Length = 484 Score = 30.0 bits (66), Expect = 8.6 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +3 Query: 72 GDGVHQMREEAGESDRAGQVEGGRQQHLRGR 164 G GVH+ EEA R GQV GG L+ R Sbjct: 310 GPGVHEPPEEAAVDPRGGQVPGGPFSRLQPR 340
>O14686:MLL2_HUMAN Myeloid/lymphoid or mixed-lineage leukemia protein 2 - Homo sapiens| (Human) Length = 5262 Score = 30.0 bits (66), Expect = 8.6 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = -2 Query: 379 HGILLTHCFACTASCPALAYHTSRTPLLNRHRCGSIYHPGAPVAYRLCIWYFHKESTC 206 H LLT C C T T NR RC ++YH G + + C+++ K C Sbjct: 4810 HRGLLTKCSLCQ--------RTGATSSCNRMRCPNVYHFGCAIRAK-CMFFKDKTMLC 4858
>Q6AYF4:ITB6_RAT Integrin beta-6 precursor - Rattus norvegicus (Rat)| Length = 787 Score = 30.0 bits (66), Expect = 8.6 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 13/99 (13%) Frame = +1 Query: 244 CKQQVHQDGKYCH--TCAYSKGVCAM----------CGKQVLDTKLYKQSNV*VGCHGIA 387 C+++V + CH ++ GVCA CG+ ++ T K+S C G Sbjct: 456 CQREVEANSSKCHHGNGSFQCGVCACNPGHMGPRCECGEDMVSTDSCKESPGHPSCSGRG 515 Query: 388 SSYCQG*SCS-GPMFNM*FHNIMCSRYCCGKRWLYLCSE 501 YC C P ++ C + C + LC + Sbjct: 516 DCYCGQCVCHLSPYGSIYGPYCQCDNFSCLRHKGLLCGD 554
>P26339:CMGA_MOUSE Chromogranin-A precursor - Mus musculus (Mouse)| Length = 463 Score = 30.0 bits (66), Expect = 8.6 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +3 Query: 21 DPDHQDLKEKPITSGGGGDGVHQMREEAGESDRAGQVEGGRQQHLRGRRPQDQ*E*APLQ 200 D D + + + S G G+ H +EE GE G +G Q +GR + + E + Sbjct: 286 DGDGKTEASEALPSEGKGELEHSQQEEDGEEAMVGTPQGLFPQGGKGRELEHKQEEEEEE 345 Query: 201 EEQVDSLWK 227 EE++ W+ Sbjct: 346 EERLSREWE 354 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 126,912,989 Number of extensions: 2914370 Number of successful extensions: 7448 Number of sequences better than 10.0: 20 Number of HSP's gapped: 7435 Number of HSP's successfully gapped: 20 Length of query: 229 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 120 Effective length of database: 70,788,284 Effective search space: 8494594080 Effective search space used: 8494594080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
