ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf149i01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066948:Os03g0117800 513 e-145
2AB109892:Os03g0309200 30 5.2
3Os05g0436100:Os05g0436100 29 8.9

>AK066948:Os03g0117800 |
          Length = 342
 Score =  513 bits (1320), Expect = e-145
 Identities = 245/294 (83%), Positives = 264/294 (89%)
 Frame = +3

Query: 279  MSDDPIKEWILTEGKATQXXXXXXXXXXCINAAQRYDTDAGSFFVKTNRRIGPAMFEGEA 458
            + +DPI++WILTEGKAT+          CIN+AQ Y TDA SFFVKTN RIGP+MFEGEA
Sbjct: 49   LGEDPIRQWILTEGKATKITGVSSIGGGCINSAQCYKTDASSFFVKTNGRIGPSMFEGEA 108

Query: 459  LGLKAMYDTKSIRVPLPYKVGSLPTGGSFIIMEFIQFGRSRGDQSALGRKLAEMHKAAKS 638
            LGLKAMYDT SIRVPLPYKVGSLPTGGSFIIMEFI+FG SRGDQSALGRKLAEMHKAAKS
Sbjct: 109  LGLKAMYDTNSIRVPLPYKVGSLPTGGSFIIMEFIEFGCSRGDQSALGRKLAEMHKAAKS 168

Query: 639  DKGYGFYVENTIGSTPQINTWTADWIEFYSKHRLGYQLKLISQRFGDSAIYEKGQRLIDN 818
            DKGYGFYV+NTIGSTPQINTWTADWIEFYSKHRLG+QL+LI+QRFGDSAIY+KGQRLI+N
Sbjct: 169  DKGYGFYVDNTIGSTPQINTWTADWIEFYSKHRLGFQLELITQRFGDSAIYDKGQRLIEN 228

Query: 819  IHPLFEGAVIEPCLLHGDLWSGNISSDTNGDPVILDPACYYGHNEAEFGMSWCAGFGGDF 998
            +HPLFEGAV+EPCLLHGDLWSGNISSDTNG+PVILDPACYYGHNEAEFGMSWCAGFGG+F
Sbjct: 229  MHPLFEGAVMEPCLLHGDLWSGNISSDTNGEPVILDPACYYGHNEAEFGMSWCAGFGGEF 288

Query: 999  YSSYFEVMPKQPGFEKRRDXXXXXXXXXXXXXFGSGYRSSAMSIIEDYLRMLKA 1160
            YSSYFEVMPKQPGFEKRRD             FGSGYRSSAMSII+DYLRMLKA
Sbjct: 289  YSSYFEVMPKQPGFEKRRDLYLLYHYLNHYNLFGSGYRSSAMSIIDDYLRMLKA 342



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>AB109892:Os03g0309200 |
          Length = 1171

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 8  RPGQPQHPFHHSQS*PVATAMATAGG 85
          RP  P+H  HHSQS   +T+ A  GG
Sbjct: 17 RPAAPRHQHHHSQSSGGSTSRAGGGG 42



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>Os05g0436100:Os05g0436100 |
          Length = 538

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = +3

Query: 381 RYDTDAGSFFVKTNRRIGPAMFEGEALGLKAMYDTKSIRV 500
           R+  +AG+ F+K    +G A+ +G++LG   +Y ++ + +
Sbjct: 105 RHYLEAGATFLKEGGGVGGAVVDGDSLGGSTVYGSQRVHI 144


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 39,544,580
Number of extensions: 932521
Number of successful extensions: 2608
Number of sequences better than 10.0: 3
Number of HSP's gapped: 2608
Number of HSP's successfully gapped: 3
Length of query: 457
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 353
Effective length of database: 11,235,591
Effective search space: 3966163623
Effective search space used: 3966163623
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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