| Clone Name | FLbaf149i01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055303.1| Oryza sativa (japonica cultivar-group) Os03g0117800 (Os03g0117800) mRNA, complete cds Length = 1333 Score = 759 bits (383), Expect = 0.0 Identities = 731/847 (86%) Strand = Plus / Plus Query: 318 gggaaggccacacagattacagggaccagctccatcgggggtggctgcatcaacgccgcc 377 ||||||||||| |||| || ||| ||| |||||||| ||||||||||| ||| | || Sbjct: 251 gggaaggccacgaagatcaccggggtcagttccatcggcggtggctgcattaactctgct 310 Query: 378 cagcgctacgacaccgatgccggctccttttttgtgaagaccaacaggcgcatcggtcca 437 ||| ||||| | ||||||||| | ||||| |||||||||||||| |||| || |||||| Sbjct: 311 cagtgctacaagaccgatgccagttccttctttgtgaagaccaatgggcgtattggtcca 370 Query: 438 gctatgtttgaaggggaggctctgggcttgaaggcaatgtatgataccaagtcaattcgt 497 |||||||||||||||||||||| || |||||||| |||||||| || || ||||| ||| Sbjct: 371 tctatgtttgaaggggaggctcttggtttgaaggccatgtatgacacaaattcaatccgt 430 Query: 498 gttcctttgccgtacaaggttggttcgttaccaactggcggttcttttatcatcatggag 557 ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 431 gttccattgccatacaaggttgggtcattaccaactggtggttcttttataatcatggag 490 Query: 558 tttattcagtttggtcgttctaggggtgaccagtcagctctagggaggaaactcgctgaa 617 |||||| | || ||| | ||||| ||||||||||||||| | || |||||||| |||||| Sbjct: 491 tttattgaattcggttgctctagaggtgaccagtcagctttgggaaggaaactagctgaa 550 Query: 618 atgcataaagctgcaaaatctgataagggctatggtttctacgttgaaaataccattgga 677 |||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct: 551 atgcataaagctgccaaatctgacaagggctatggtttctatgttgacaatacaattgga 610 Query: 678 agcactccacaaatcaacacttggactgctgactggattgagttttactcgaagcataga 737 |||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 611 agcactccgcaaattaacacttggactgccgactggattgagttttattcaaagcataga 670 Query: 738 ctgggataccagttgaagttgatatcacagcggttcggagattcagctatatatgaaaaa 797 |||| | ||| || |||||||| | || || || |||||||| || |||||||| ||| Sbjct: 671 ttgggcttccaattagagttgataacccaacgatttggagattcggcaatatatgataaa 730 Query: 798 ggtcagcgattgattgacaatatccatccactgtttgagggtgctgtaattgaaccatgc 857 |||||||||||||| || ||||| |||||||| ||||| || ||||| || || |||||| Sbjct: 731 ggtcagcgattgatcgagaatatgcatccactttttgaaggcgctgttatggagccatgc 790 Query: 858 ctgcttcatggagatttatggagtggaaatataagctccgatactaatggagatcctgta 917 |||||||||| ||| ||||||||||||| ||||| || ||||||||||| || ||||| Sbjct: 791 ttgcttcatggggatctatggagtggaaacataagttctgatactaatggtgaacctgtt 850 Query: 918 atattggatccagcatgctactatggacacaatgaagcagagtttgggatgtcatggtgc 977 |||||||| ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||| Sbjct: 851 atattggacccagcttgctactatggccacaacgaagcggagtttggtatgtcatggtgc 910 Query: 978 gctggattcggaggggatttctacagctcctatttcgaggtgatgccgaaacagccaggc 1037 |||||||| || ||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 911 gctggatttgggggggaattctatagctcctattttgaggtgatgccgaaacagccaggc 970 Query: 1038 tttgagaaaaggagggacctgtatttactctaccactacctgaatcactacaaccttttc 1097 |||||||| ||||||||||||||| | || |||||||| ||||| |||||||| ||||| Sbjct: 971 tttgagaagaggagggacctgtatcttctgtaccactatctgaaccactacaatcttttt 1030 Query: 1098 ggctctgggtaccgctcgtcagccatgtccataatcgaagactacctgcggatgctcaag 1157 ||||| ||||||||||| ||||| |||||||| ||||| |||||| || ||||||| ||| Sbjct: 1031 ggctccgggtaccgctcatcagctatgtccattatcgatgactacttgaggatgctgaag 1090 Query: 1158 gcatagc 1164 || |||| Sbjct: 1091 gcttagc 1097
>dbj|AK066948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089A07, full insert sequence Length = 1335 Score = 759 bits (383), Expect = 0.0 Identities = 731/847 (86%) Strand = Plus / Plus Query: 318 gggaaggccacacagattacagggaccagctccatcgggggtggctgcatcaacgccgcc 377 ||||||||||| |||| || ||| ||| |||||||| ||||||||||| ||| | || Sbjct: 253 gggaaggccacgaagatcaccggggtcagttccatcggcggtggctgcattaactctgct 312 Query: 378 cagcgctacgacaccgatgccggctccttttttgtgaagaccaacaggcgcatcggtcca 437 ||| ||||| | ||||||||| | ||||| |||||||||||||| |||| || |||||| Sbjct: 313 cagtgctacaagaccgatgccagttccttctttgtgaagaccaatgggcgtattggtcca 372 Query: 438 gctatgtttgaaggggaggctctgggcttgaaggcaatgtatgataccaagtcaattcgt 497 |||||||||||||||||||||| || |||||||| |||||||| || || ||||| ||| Sbjct: 373 tctatgtttgaaggggaggctcttggtttgaaggccatgtatgacacaaattcaatccgt 432 Query: 498 gttcctttgccgtacaaggttggttcgttaccaactggcggttcttttatcatcatggag 557 ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 433 gttccattgccatacaaggttgggtcattaccaactggtggttcttttataatcatggag 492 Query: 558 tttattcagtttggtcgttctaggggtgaccagtcagctctagggaggaaactcgctgaa 617 |||||| | || ||| | ||||| ||||||||||||||| | || |||||||| |||||| Sbjct: 493 tttattgaattcggttgctctagaggtgaccagtcagctttgggaaggaaactagctgaa 552 Query: 618 atgcataaagctgcaaaatctgataagggctatggtttctacgttgaaaataccattgga 677 |||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct: 553 atgcataaagctgccaaatctgacaagggctatggtttctatgttgacaatacaattgga 612 Query: 678 agcactccacaaatcaacacttggactgctgactggattgagttttactcgaagcataga 737 |||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 613 agcactccgcaaattaacacttggactgccgactggattgagttttattcaaagcataga 672 Query: 738 ctgggataccagttgaagttgatatcacagcggttcggagattcagctatatatgaaaaa 797 |||| | ||| || |||||||| | || || || |||||||| || |||||||| ||| Sbjct: 673 ttgggcttccaattagagttgataacccaacgatttggagattcggcaatatatgataaa 732 Query: 798 ggtcagcgattgattgacaatatccatccactgtttgagggtgctgtaattgaaccatgc 857 |||||||||||||| || ||||| |||||||| ||||| || ||||| || || |||||| Sbjct: 733 ggtcagcgattgatcgagaatatgcatccactttttgaaggcgctgttatggagccatgc 792 Query: 858 ctgcttcatggagatttatggagtggaaatataagctccgatactaatggagatcctgta 917 |||||||||| ||| ||||||||||||| ||||| || ||||||||||| || ||||| Sbjct: 793 ttgcttcatggggatctatggagtggaaacataagttctgatactaatggtgaacctgtt 852 Query: 918 atattggatccagcatgctactatggacacaatgaagcagagtttgggatgtcatggtgc 977 |||||||| ||||| ||||||||||| ||||| ||||| |||||||| |||||||||||| Sbjct: 853 atattggacccagcttgctactatggccacaacgaagcggagtttggtatgtcatggtgc 912 Query: 978 gctggattcggaggggatttctacagctcctatttcgaggtgatgccgaaacagccaggc 1037 |||||||| || ||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 913 gctggatttgggggggaattctatagctcctattttgaggtgatgccgaaacagccaggc 972 Query: 1038 tttgagaaaaggagggacctgtatttactctaccactacctgaatcactacaaccttttc 1097 |||||||| ||||||||||||||| | || |||||||| ||||| |||||||| ||||| Sbjct: 973 tttgagaagaggagggacctgtatcttctgtaccactatctgaaccactacaatcttttt 1032 Query: 1098 ggctctgggtaccgctcgtcagccatgtccataatcgaagactacctgcggatgctcaag 1157 ||||| ||||||||||| ||||| |||||||| ||||| |||||| || ||||||| ||| Sbjct: 1033 ggctccgggtaccgctcatcagctatgtccattatcgatgactacttgaggatgctgaag 1092 Query: 1158 gcatagc 1164 || |||| Sbjct: 1093 gcttagc 1099
>gb|AY110314.1| Zea mays CL24410_-1 mRNA sequence Length = 616 Score = 224 bits (113), Expect = 7e-55 Identities = 182/205 (88%) Strand = Plus / Minus Query: 940 atggacacaatgaagcagagtttgggatgtcatggtgcgctggattcggaggggatttct 999 |||||||||| || ||||||||||||||||| ||||| |||||||| || ||||| |||| Sbjct: 293 atggacacaacgaggcagagtttgggatgtcctggtgtgctggatttggtggggacttct 234 Query: 1000 acagctcctatttcgaggtgatgccgaaacagccaggctttgagaaaaggagggacctgt 1059 ||| | ||||||| |||||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 233 acaacgcctattttcaggtgatgccgaaacagccagggtttgagaagaggagggacctct 174 Query: 1060 atttactctaccactacctgaatcactacaaccttttcggctctgggtaccgctcgtcag 1119 || | |||||||||||||||||||||||||| || || |||||||| ||||| || |||| Sbjct: 173 atctcctctaccactacctgaatcactacaatctctttggctctggctaccgttcatcag 114 Query: 1120 ccatgtccataatcgaagactacct 1144 | ||||||||||||||||||||||| Sbjct: 113 ctatgtccataatcgaagactacct 89 Score = 75.8 bits (38), Expect = 4e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 846 attgaaccatgcctgcttcatggagatttatggagtggaaatataagctccgatactaat 905 ||||| || ||| |||||||||| ||| | ||||| ||||| |||||||| |||| ||| Sbjct: 487 attgagccgtgcttgcttcatggtgatctgtggagcggaaacataagctctgatagcaat 428 Query: 906 ggagatcctgtaatattggatccagcatgctact 939 || |||||||||||||||||||| || ||||||| Sbjct: 427 ggggatcctgtaatattggatcctgcttgctact 394 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Minus Query: 717 gagttttactcgaagcatagactgggataccagttgaagttg 758 ||||||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 616 gagttttactccaagcatagattgggttaccagttggagttg 575
>gb|AF354659.1| Triticum aestivum isolate GCTG/CTC2 scab resistance-linked AFLP fragment gene sequence Length = 307 Score = 218 bits (110), Expect = 4e-53 Identities = 149/162 (91%) Strand = Plus / Minus Query: 1015 aggtgatgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccact 1074 ||||||||||||| ||||||||||||||||| ||||||||||||||| | || ||||||| Sbjct: 212 aggtgatgccgaagcagccaggctttgagaagaggagggacctgtatctcctataccact 153 Query: 1075 acctgaatcactacaaccttttcggctctgggtaccgctcgtcagccatgtccataatcg 1134 |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 152 acctgaatcactacaacctttttggctctgggtaccgctcctcagctatgtccataatcg 93 Query: 1135 aagactacctgcggatgctcaaggcatagccacatcttctct 1176 ||||||||||| ||||||| ||||| ||||| | |||||||| Sbjct: 92 aagactacctggggatgctgaaggcgtagcctcgtcttctct 51
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 163 bits (82), Expect = 2e-36 Identities = 133/150 (88%) Strand = Plus / Plus Query: 1015 aggtgatgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccact 1074 ||||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||| Sbjct: 112909 aggtgatgccgaaacagccaggctttgagaagaggagggacctgtatcttctgtaccact 112968 Query: 1075 acctgaatcactacaaccttttcggctctgggtaccgctcgtcagccatgtccataatcg 1134 | ||||| |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 112969 atctgaaccactacaatctttttggctccgggtaccgctcatcagctatgtccattatcg 113028 Query: 1135 aagactacctgcggatgctcaaggcatagc 1164 | |||||| || ||||||| ||||| |||| Sbjct: 113029 atgactacttgaggatgctgaaggcttagc 113058 Score = 125 bits (63), Expect = 5e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 797 aggtcagcgattgattgacaatatccatccactgtttgagggtgctgtaattgaaccatg 856 ||||||||||||||| || ||||| |||||||| ||||| || ||||| || || ||||| Sbjct: 111535 aggtcagcgattgatcgagaatatgcatccactttttgaaggcgctgttatggagccatg 111594 Query: 857 cctgcttcatggagatttatggagtggaaatataagctccgatactaatggagatcctgt 916 | |||||||||| ||| ||||||||||||| ||||| || ||||||||||| || ||||| Sbjct: 111595 cttgcttcatggggatctatggagtggaaacataagttctgatactaatggtgaacctgt 111654 Query: 917 aatattggatccagcatgctact 939 |||||||| ||||| ||||||| Sbjct: 111655 tatattggacccagcttgctact 111677 Score = 111 bits (56), Expect = 7e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 588 cagtcagctctagggaggaaactcgctgaaatgcataaagctgcaaaatctgataagggc 647 ||||||||| | || |||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 111080 cagtcagctttgggaaggaaactagctgaaatgcataaagctgccaaatctgacaagggc 111139 Query: 648 tatggtttctacgttgaaaataccattggaag 679 ||||||||||| ||||| ||||| |||||||| Sbjct: 111140 tatggtttctatgttgacaatacaattggaag 111171 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 422 caggcgcatcggtccagctatgtttgaaggggaggctctgggcttgaaggcaatgtatga 481 |||||| || |||||| |||||||||||||||||||||| || |||||||| |||||||| Sbjct: 110337 caggcgtattggtccatctatgtttgaaggggaggctcttggtttgaaggccatgtatga 110396 Query: 482 taccaagtcaattcgtgttcctttgccgtacaaggtt 518 || || ||||| |||||||| ||||| ||||||||| Sbjct: 110397 cacaaattcaatccgtgttccattgccatacaaggtt 110433 Score = 93.7 bits (47), Expect = 2e-15 Identities = 104/123 (84%) Strand = Plus / Plus Query: 678 agcactccacaaatcaacacttggactgctgactggattgagttttactcgaagcataga 737 |||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 111281 agcactccgcaaattaacacttggactgccgactggattgagttttattcaaagcataga 111340 Query: 738 ctgggataccagttgaagttgatatcacagcggttcggagattcagctatatatgaaaaa 797 |||| | ||| || |||||||| | || || || |||||||| || |||||||| ||| Sbjct: 111341 ttgggcttccaattagagttgataacccaacgatttggagattcggcaatatatgataaa 111400 Query: 798 ggt 800 ||| Sbjct: 111401 ggt 111403 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 940 atggacacaatgaagcagagtttgggatgtcatggtgcgctggattcggaggggatttct 999 |||| ||||| ||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 112016 atggccacaacgaagcggagtttggtatgtcatggtgcgctggatttgggggggaattct 112075 Query: 1000 acagctcctatttcgaggt 1018 | ||||||||||| ||||| Sbjct: 112076 atagctcctattttgaggt 112094 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 514 aggttggttcgttaccaactggcggttcttttatcatcatggagtttattcagtttggtc 573 ||||||| || ||||||||||| ||||||||||| ||||||||||||||| | || ||| Sbjct: 110929 aggttgggtcattaccaactggtggttcttttataatcatggagtttattgaattcggtt 110988 Query: 574 gttctaggggtgaccag 590 | ||||| ||||||||| Sbjct: 110989 gctctagaggtgaccag 111005 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 318 gggaaggccacacagattacagggaccagctccatcgggggtggctgcatcaacgccgcc 377 ||||||||||| |||| || ||| ||| |||||||| ||||||||||| ||| | || Sbjct: 110123 gggaaggccacgaagatcaccggggtcagttccatcggcggtggctgcattaactctgct 110182 Query: 378 cagcgctacgacaccgatgccggctccttttttgtgaagaccaa 421 ||| ||||| | ||||||||| | ||||| |||||||||||||| Sbjct: 110183 cagtgctacaagaccgatgccagttccttctttgtgaagaccaa 110226
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 163 bits (82), Expect = 2e-36 Identities = 133/150 (88%) Strand = Plus / Plus Query: 1015 aggtgatgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccact 1074 ||||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||| Sbjct: 957710 aggtgatgccgaaacagccaggctttgagaagaggagggacctgtatcttctgtaccact 957769 Query: 1075 acctgaatcactacaaccttttcggctctgggtaccgctcgtcagccatgtccataatcg 1134 | ||||| |||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct: 957770 atctgaaccactacaatctttttggctccgggtaccgctcatcagctatgtccattatcg 957829 Query: 1135 aagactacctgcggatgctcaaggcatagc 1164 | |||||| || ||||||| ||||| |||| Sbjct: 957830 atgactacttgaggatgctgaaggcttagc 957859 Score = 125 bits (63), Expect = 5e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 797 aggtcagcgattgattgacaatatccatccactgtttgagggtgctgtaattgaaccatg 856 ||||||||||||||| || ||||| |||||||| ||||| || ||||| || || ||||| Sbjct: 956336 aggtcagcgattgatcgagaatatgcatccactttttgaaggcgctgttatggagccatg 956395 Query: 857 cctgcttcatggagatttatggagtggaaatataagctccgatactaatggagatcctgt 916 | |||||||||| ||| ||||||||||||| ||||| || ||||||||||| || ||||| Sbjct: 956396 cttgcttcatggggatctatggagtggaaacataagttctgatactaatggtgaacctgt 956455 Query: 917 aatattggatccagcatgctact 939 |||||||| ||||| ||||||| Sbjct: 956456 tatattggacccagcttgctact 956478 Score = 111 bits (56), Expect = 7e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 588 cagtcagctctagggaggaaactcgctgaaatgcataaagctgcaaaatctgataagggc 647 ||||||||| | || |||||||| |||||||||||||||||||| |||||||| |||||| Sbjct: 955881 cagtcagctttgggaaggaaactagctgaaatgcataaagctgccaaatctgacaagggc 955940 Query: 648 tatggtttctacgttgaaaataccattggaag 679 ||||||||||| ||||| ||||| |||||||| Sbjct: 955941 tatggtttctatgttgacaatacaattggaag 955972 Score = 97.6 bits (49), Expect = 1e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 422 caggcgcatcggtccagctatgtttgaaggggaggctctgggcttgaaggcaatgtatga 481 |||||| || |||||| |||||||||||||||||||||| || |||||||| |||||||| Sbjct: 955138 caggcgtattggtccatctatgtttgaaggggaggctcttggtttgaaggccatgtatga 955197 Query: 482 taccaagtcaattcgtgttcctttgccgtacaaggtt 518 || || ||||| |||||||| ||||| ||||||||| Sbjct: 955198 cacaaattcaatccgtgttccattgccatacaaggtt 955234 Score = 93.7 bits (47), Expect = 2e-15 Identities = 104/123 (84%) Strand = Plus / Plus Query: 678 agcactccacaaatcaacacttggactgctgactggattgagttttactcgaagcataga 737 |||||||| ||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 956082 agcactccgcaaattaacacttggactgccgactggattgagttttattcaaagcataga 956141 Query: 738 ctgggataccagttgaagttgatatcacagcggttcggagattcagctatatatgaaaaa 797 |||| | ||| || |||||||| | || || || |||||||| || |||||||| ||| Sbjct: 956142 ttgggcttccaattagagttgataacccaacgatttggagattcggcaatatatgataaa 956201 Query: 798 ggt 800 ||| Sbjct: 956202 ggt 956204 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 940 atggacacaatgaagcagagtttgggatgtcatggtgcgctggattcggaggggatttct 999 |||| ||||| ||||| |||||||| |||||||||||||||||||| || ||||| |||| Sbjct: 956817 atggccacaacgaagcggagtttggtatgtcatggtgcgctggatttgggggggaattct 956876 Query: 1000 acagctcctatttcgaggt 1018 | ||||||||||| ||||| Sbjct: 956877 atagctcctattttgaggt 956895 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 514 aggttggttcgttaccaactggcggttcttttatcatcatggagtttattcagtttggtc 573 ||||||| || ||||||||||| ||||||||||| ||||||||||||||| | || ||| Sbjct: 955730 aggttgggtcattaccaactggtggttcttttataatcatggagtttattgaattcggtt 955789 Query: 574 gttctaggggtgaccag 590 | ||||| ||||||||| Sbjct: 955790 gctctagaggtgaccag 955806 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Plus Query: 318 gggaaggccacacagattacagggaccagctccatcgggggtggctgcatcaacgccgcc 377 ||||||||||| |||| || ||| ||| |||||||| ||||||||||| ||| | || Sbjct: 954924 gggaaggccacgaagatcaccggggtcagttccatcggcggtggctgcattaactctgct 954983 Query: 378 cagcgctacgacaccgatgccggctccttttttgtgaagaccaa 421 ||| ||||| | ||||||||| | ||||| |||||||||||||| Sbjct: 954984 cagtgctacaagaccgatgccagttccttctttgtgaagaccaa 955027 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 18315609 gccacggcgatggcgacggcg 18315589
>gb|AC183426.2| Populus trichocarpa clone Pop1-45L17, complete sequence Length = 50019 Score = 73.8 bits (37), Expect = 1e-09 Identities = 70/81 (86%) Strand = Plus / Minus Query: 596 tctagggaggaaactcgctgaaatgcataaagctgcaaaatctgataagggctatggttt 655 ||||||||| || || ||||||||||||||||||| |||||||| || |||| |||||| Sbjct: 12646 tctagggagaaagcttgctgaaatgcataaagctgggaaatctgaaaaaggctttggttt 12587 Query: 656 ctacgttgaaaataccattgg 676 | | ||||| ||||||||||| Sbjct: 12586 cgatgttgataataccattgg 12566 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 1015 aggtgatgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccact 1074 |||||||||| ||||| |||||||||||||| ||||| || | ||||| || || |||| Sbjct: 10853 aggtgatgcccaaacaaccaggctttgagaagaggagagagatctatttgctgtatcact 10794 Query: 1075 acctgaatcactacaa 1090 |||||||||| ||||| Sbjct: 10793 acctgaatcattacaa 10778 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 940 atggacacaatgaagcagagtttgggatgtcatggtgcgctggattcggagg 991 ||||||||||||||||||| ||||| ||||||||||| ||||| || ||||| Sbjct: 11307 atggacacaatgaagcagaatttggaatgtcatggtgtgctggttttggagg 11256 Score = 42.1 bits (21), Expect = 5.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 681 actccacaaatcaacacttggactgctgactggattgagttttac 725 |||||||| || ||||||||||| | |||||||| ||||||||| Sbjct: 12422 actccacagataaacacttggacatcagactggatagagttttac 12378
>ref|NM_115972.3| Arabidopsis thaliana kinase (AT3G61080) mRNA, complete cds Length = 1219 Score = 58.0 bits (29), Expect = 9e-05 Identities = 155/197 (78%) Strand = Plus / Plus Query: 960 tttgggatgtcatggtgcgctggattcggaggggatttctacagctcctatttcgaggtg 1019 ||||| ||||| |||||||| ||||| |||| |||||||| |||||||| |||| Sbjct: 800 tttggaatgtcgtggtgcgcaggatttggagaatctttctacaatgcctatttcaaggta 859 Query: 1020 atgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccactacctg 1079 ||||| ||||| | || | |||||| |||||||| |||||||| ||||| || ||| || Sbjct: 860 atgccaaaacaagcgggatatgagaagaggagggatctgtatttgctctatcattacttg 919 Query: 1080 aatcactacaaccttttcggctctgggtaccgctcgtcagccatgtccataatcgaagac 1139 || || || ||||| || ||||| || ||||| || || || ||||| || ||||| || Sbjct: 920 aaccattataacctgtttggctcgggctaccgatcatctgcgatgtcaatcatcgatgat 979 Query: 1140 tacctgcggatgctcaa 1156 || || ||||||||||| Sbjct: 980 tatctacggatgctcaa 996
>gb|AY117356.1| Arabidopsis thaliana unknown protein (At3g61080) mRNA, complete cds Length = 1012 Score = 58.0 bits (29), Expect = 9e-05 Identities = 155/197 (78%) Strand = Plus / Plus Query: 960 tttgggatgtcatggtgcgctggattcggaggggatttctacagctcctatttcgaggtg 1019 ||||| ||||| |||||||| ||||| |||| |||||||| |||||||| |||| Sbjct: 778 tttggaatgtcgtggtgcgcaggatttggagaatctttctacaatgcctatttcaaggta 837 Query: 1020 atgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccactacctg 1079 ||||| ||||| | || | |||||| |||||||| |||||||| ||||| || ||| || Sbjct: 838 atgccaaaacaagcgggatatgagaagaggagggatctgtatttgctctatcattacttg 897 Query: 1080 aatcactacaaccttttcggctctgggtaccgctcgtcagccatgtccataatcgaagac 1139 || || || ||||| || ||||| || ||||| || || || ||||| || ||||| || Sbjct: 898 aaccattataacctgtttggctcgggctaccgatcatctgcgatgtcaatcatcgatgat 957 Query: 1140 tacctgcggatgctcaa 1156 || || ||||||||||| Sbjct: 958 tatctacggatgctcaa 974
>gb|AY070080.1| Arabidopsis thaliana unknown protein (At3g61080) mRNA, complete cds Length = 1234 Score = 58.0 bits (29), Expect = 9e-05 Identities = 155/197 (78%) Strand = Plus / Plus Query: 960 tttgggatgtcatggtgcgctggattcggaggggatttctacagctcctatttcgaggtg 1019 ||||| ||||| |||||||| ||||| |||| |||||||| |||||||| |||| Sbjct: 799 tttggaatgtcgtggtgcgcaggatttggagaatctttctacaatgcctatttcaaggta 858 Query: 1020 atgccgaaacagccaggctttgagaaaaggagggacctgtatttactctaccactacctg 1079 ||||| ||||| | || | |||||| |||||||| |||||||| ||||| || ||| || Sbjct: 859 atgccaaaacaagcgggatatgagaagaggagggatctgtatttgctctatcattacttg 918 Query: 1080 aatcactacaaccttttcggctctgggtaccgctcgtcagccatgtccataatcgaagac 1139 || || || ||||| || ||||| || ||||| || || || ||||| || ||||| || Sbjct: 919 aaccattataacctgtttggctcgggctaccgatcatctgcgatgtcaatcatcgatgat 978 Query: 1140 tacctgcggatgctcaa 1156 || || ||||||||||| Sbjct: 979 tatctacggatgctcaa 995
>emb|AL358732.1|ATT27I15 Arabidopsis thaliana DNA chromosome 3, BAC clone T27I15 Length = 112584 Score = 50.1 bits (25), Expect = 0.021 Identities = 94/117 (80%) Strand = Plus / Plus Query: 1040 tgagaaaaggagggacctgtatttactctaccactacctgaatcactacaaccttttcgg 1099 |||||| |||||||| |||||||| ||||| || ||| |||| || || ||||| || || Sbjct: 106556 tgagaagaggagggatctgtatttgctctatcattacttgaaccattataacctgtttgg 106615 Query: 1100 ctctgggtaccgctcgtcagccatgtccataatcgaagactacctgcggatgctcaa 1156 ||| || ||||| || || || ||||| || ||||| || || || ||||||||||| Sbjct: 106616 ctcgggctaccgatcatctgcgatgtcaatcatcgatgattatctacggatgctcaa 106672
>gb|AC017004.4| Homo sapiens BAC clone RP11-88C6 from 2, complete sequence Length = 184850 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 543 tttatcatcatggagtttattcagtttgg 571 |||||||||||||||| |||||||||||| Sbjct: 31425 tttatcatcatggagtatattcagtttgg 31397
>emb|BX822693.1|CNS0A5VF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 50.1 bits (25), Expect = 0.021 Identities = 94/117 (80%) Strand = Plus / Plus Query: 1040 tgagaaaaggagggacctgtatttactctaccactacctgaatcactacaaccttttcgg 1099 |||||| |||||||| |||||||| ||||| || ||| |||| || || ||||| || || Sbjct: 1034 tgagaagaggagggatctgtatttgctctatcattacttgaaccattataacctgtttgg 1093 Query: 1100 ctctgggtaccgctcgtcagccatgtccataatcgaagactacctgcggatgctcaa 1156 ||| || ||||| || || || ||||| || ||||| || || || ||||||||||| Sbjct: 1094 ctcgggctaccgatcatctgcgatgtcaatcatcgatgattatctacggatgctcaa 1150
>gb|AC136220.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075J06, complete sequence Length = 127053 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 tagccacggcgatggcgacggcg 79 ||||||||||||||||||||||| Sbjct: 115490 tagccacggcgatggcgacggcg 115512
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 tagccacggcgatggcgacggcg 79 ||||||||||||||||||||||| Sbjct: 9479760 tagccacggcgatggcgacggcg 9479782 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 2897072 gccacggcgatggcgacggcg 2897092 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 27188961 gccacggcgatggcgacggcg 27188981
>gb|AC163399.6| Mus musculus chromosome 18, clone RP24-66G13, complete sequence Length = 173868 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 315 gaggggaaggccacacagatta 336 |||||||||||||||||||||| Sbjct: 128660 gaggggaaggccacacagatta 128681
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 115 cgagctcggagaagaaggcgagcgcg 140 |||| ||||||||||||||||||||| Sbjct: 995984 cgaggtcggagaagaaggcgagcgcg 995959
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1134 gaagactacctgcggatgctca 1155 |||||||||||||||||||||| Sbjct: 26545087 gaagactacctgcggatgctca 26545066 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 5176925 gccacggcgatggcgacggcg 5176945
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 63 cggcgatggcgacggcgggcggcagc 88 ||||||||||||||||| |||||||| Sbjct: 15781911 cggcgatggcgacggcgcgcggcagc 15781886 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 92943 gccacggcgatggcgacggcg 92923 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 13153026 gccacggcgatggcgacggcg 13153046 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 26603697 gccacggcgatggcgacggcg 26603677 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 26793751 gccacggcgatggcgacggcg 26793731
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1215 ccacaatggcatgcatgtatga 1236 |||||||||||||||||||||| Sbjct: 186755 ccacaatggcatgcatgtatga 186776
>emb|AL078606.1|ATT26M18 Arabidopsis thaliana DNA chromosome 4, BAC clone T26M18 (ESSA project) Length = 90824 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1215 ccacaatggcatgcatgtatga 1236 |||||||||||||||||||||| Sbjct: 49455 ccacaatggcatgcatgtatga 49476
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 63 cggcgatggcgacggcgggcggcagc 88 ||||||||||||||||| |||||||| Sbjct: 117549 cggcgatggcgacggcgcgcggcagc 117524
>emb|AL713945.5|CNS07YPO Oryza sativa chromosome 12, . BAC OJ1727_H11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 85710 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1134 gaagactacctgcggatgctca 1155 |||||||||||||||||||||| Sbjct: 15092 gaagactacctgcggatgctca 15071
>emb|CR855218.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0106P14, complete sequence Length = 96899 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 27113 gccacggcgatggcgacggcg 27133
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 ggcgatggcgacggcgggcggcagc 88 |||||||||||||| |||||||||| Sbjct: 4538 ggcgatggcgacggggggcggcagc 4562
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 31508 gccacggcgatggcgacggcg 31528
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 133871 gccacggcgatggcgacggcg 133851 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 140511 gccacggcgatggcgacggcg 140491
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 105074 gccacggcgatggcgacggcg 105094
>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20 map near S6115, complete sequence Length = 139249 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 88069 gccacggcgatggcgacggcg 88089 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 94709 gccacggcgatggcgacggcg 94729
>gb|AC110173.11| Mus musculus chromosome 8, clone RP24-396D19, complete sequence Length = 136535 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 904 atggagatcctgtaatattggatcc 928 |||||||||||||||| |||||||| Sbjct: 133294 atggagatcctgtaattttggatcc 133270
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 67444 gccacggcgatggcgacggcg 67464
>gb|AY432028.1| Aedes aegypti ASAP ID: 34461 unknown mRNA sequence Length = 365 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1043 gaaaaggagggacctgtatttactc 1067 |||||||||||||| |||||||||| Sbjct: 143 gaaaaggagggacccgtatttactc 167
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 91683 gccacggcgatggcgacggcg 91703
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 63929 gccacggcgatggcgacggcg 63949
>gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, complete sequence Length = 224985 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 904 atggagatcctgtaatattggatcc 928 |||||||||||||||| |||||||| Sbjct: 210540 atggagatcctgtaattttggatcc 210564
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 120357 gccacggcgatggcgacggcg 120377
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 87999 gccacggcgatggcgacggcg 87979
>gb|AC144509.3| Mus musculus BAC clone RP23-394G5 from chromosome 5, complete sequence Length = 181316 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1319 tgaaacctcctattatatctgtaaa 1343 |||||||||| |||||||||||||| Sbjct: 72877 tgaaacctccaattatatctgtaaa 72853
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 156807 gccacggcgatggcgacggcg 156787
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cggcgatggcgacggcgggcg 83 ||||||||||||||||||||| Sbjct: 45644 cggcgatggcgacggcgggcg 45624
>gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, complete sequence Length = 189047 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ccaggcctgggcagccgcagc 26 ||||||||||||||||||||| Sbjct: 61190 ccaggcctgggcagccgcagc 61170
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 11789811 gccacggcgatggcgacggcg 11789791 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 12027443 gccacggcgatggcgacggcg 12027463 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 12034083 gccacggcgatggcgacggcg 12034103 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 22184491 gccacggcgatggcgacggcg 22184511
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cggcgatggcgacggcgggcg 83 ||||||||||||||||||||| Sbjct: 2480445 cggcgatggcgacggcgggcg 2480425 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 12436731 gccacggcgatggcgacggcg 12436711
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 14559661 gccacggcgatggcgacggcg 14559681 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 25778258 gccacggcgatggcgacggcg 25778238
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 3555753 gccacggcgatggcgacggcg 3555773 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 24055867 gccacggcgatggcgacggcg 24055887
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 6030364 gccacggcgatggcgacggcg 6030344 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 19177124 gccacggcgatggcgacggcg 19177104 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 27413337 gccacggcgatggcgacggcg 27413357 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 28008226 gccacggcgatggcgacggcg 28008206
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 5803819 gccacggcgatggcgacggcg 5803799 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 13091480 gccacggcgatggcgacggcg 13091460 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gatggcgacggcgggcggcag 87 ||||||||||||||||||||| Sbjct: 18218630 gatggcgacggcgggcggcag 18218650 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 25167737 gccacggcgatggcgacggcg 25167717
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cggcgatggcgacggcgggcg 83 ||||||||||||||||||||| Sbjct: 137177 cggcgatggcgacggcgggcg 137157
>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0043E10, complete sequence Length = 124591 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 10213 gccacggcgatggcgacggcg 10193
>gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-424E9, complete sequence Length = 162773 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ccaggcctgggcagccgcagc 26 ||||||||||||||||||||| Sbjct: 2480 ccaggcctgggcagccgcagc 2500
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 64491 gccacggcgatggcgacggcg 64511
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 15451 gccacggcgatggcgacggcg 15431
>gb|AC068042.5| Homo sapiens BAC clone RP11-535B12 from 2, complete sequence Length = 172617 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 630 gcaaaatctgataagggctat 650 ||||||||||||||||||||| Sbjct: 72816 gcaaaatctgataagggctat 72796
>dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1174_G05 Length = 111202 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 97475 gccacggcgatggcgacggcg 97495
>dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1075D06 Length = 130528 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 gatggcgacggcgggcggcag 87 ||||||||||||||||||||| Sbjct: 70075 gatggcgacggcgggcggcag 70095
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 7560 gccacggcgatggcgacggcg 7540
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 128521 gccacggcgatggcgacggcg 128501
>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1460A05 Length = 143371 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 92943 gccacggcgatggcgacggcg 92923
>dbj|AP003220.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0035I14 Length = 117919 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 33746 gccacggcgatggcgacggcg 33726
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 70214 gccacggcgatggcgacggcg 70234
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 67201 gccacggcgatggcgacggcg 67181
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 48377 gccacggcgatggcgacggcg 48357
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 137350 gccacggcgatggcgacggcg 137330
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 20127 gccacggcgatggcgacggcg 20107
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 50469 gccacggcgatggcgacggcg 50449
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 25070 gccacggcgatggcgacggcg 25090
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 93703 gccacggcgatggcgacggcg 93723
>dbj|AP004652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0002F11 Length = 135446 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 63135 gccacggcgatggcgacggcg 63155
>gb|AC096554.1| Homo sapiens BAC clone RP11-76I14 from 2, complete sequence Length = 144683 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1241 catggtctatgtgtaccactt 1261 ||||||||||||||||||||| Sbjct: 90872 catggtctatgtgtaccactt 90852
>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13, complete sequence Length = 137572 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 53761 gccacggcgatggcgacggcg 53741
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 127599 gccacggcgatggcgacggcg 127619
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 110645 gccacggcgatggcgacggcg 110625
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 gccacggcgatggcgacggcg 79 ||||||||||||||||||||| Sbjct: 86674 gccacggcgatggcgacggcg 86654 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 221,691,465 Number of extensions: 11413350 Number of successful extensions: 231122 Number of sequences better than 10.0: 73 Number of HSP's gapped: 231122 Number of HSP's successfully gapped: 114 Length of query: 1371 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1348 Effective length of database: 18,503,978,556 Effective search space: 24943363093488 Effective search space used: 24943363093488 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)