| Clone Name | FLbaf141o06 |
|---|---|
| Clone Library Name | barley_pub |
>Q6CXZ7:PALI1_KLULA pH-response regulator palI/RIM9 homolog 1 - Kluyveromyces lactis| (Yeast) (Candida sphaerica) Length = 220 Score = 36.6 bits (83), Expect = 0.25 Identities = 27/107 (25%), Positives = 51/107 (47%) Frame = +1 Query: 451 VYAPRKAKIFTAKIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWICVGFSVCVFVAPLS 630 ++ P AK +K+ LL+++ F + V LFA ++ + W+ SV +F S Sbjct: 76 LHLPNHAKYALSKL-LLVHVLSFVCVLVFWLFAI-----LICIKWLNTSKSVLLFAVGWS 129 Query: 631 IIGRVIKTKSVEYMPFSLSLTLTLSAIVWFLYGLLIKDKYVALPNIL 771 ++ T V + F + + + S + W + +L+ +VAL IL Sbjct: 130 MV-----TFMVSLLGFLIDVLMFASHVTWSSWLMLVSAFFVALSGIL 171
>O86233:Y112B_HAEIN Uncharacterized membrane protein HI1126.1 - Haemophilus influenzae| Length = 371 Score = 35.0 bits (79), Expect = 0.74 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 13/103 (12%) Frame = +1 Query: 346 MLWIFYALVKTGEGLLITINAAGCVIETVYII-------MYLV-----YAPR-KAKIFTA 486 MLW F+ + L+I G +IE +++I Y V Y P K KI+ Sbjct: 6 MLWFFFCVTV----LIIGYFIYGKIIEKIFVINPKRQTPAYQVNDGVDYMPMSKTKIW-- 59 Query: 487 KIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWICVGFSVCVF 615 ++ LLNIAG G IF L A +G V++ WI +G C+F Sbjct: 60 -LIQLLNIAGTGPIFGPILGALYGP---VAMLWIVIG---CIF 95
>Q5T848:GP158_HUMAN Probable G-protein coupled receptor 158 precursor - Homo sapiens| (Human) Length = 1215 Score = 33.9 bits (76), Expect = 1.6 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%) Frame = +1 Query: 433 YIIMYLVYAPRKAKIFTAKIVLLLNIAGFG---LIFVLTLFAFHGET-RVVSLGWI-CVG 597 ++ M +VY RKAK A ++LL FG L F + + F T R + L W +G Sbjct: 432 FVSMLVVYHFRKAKSIRASGLILLETILFGSLLLYFPVVILYFEPSTFRCILLRWARLLG 491 Query: 598 FSVCVFVAPLSI--IGRVIKTKSVEYMPFSLS------LTLTLSAIVWFLYG 729 F+ L + + +V +++ + +P+ L + L + WFL G Sbjct: 492 FATVYGTVTLKLHRVLKVFLSRTAQRIPYMTGGRVMRMLAVILLVVFWFLIG 543
>O78937:CYB_TAXTA Cytochrome b - Taxidea taxus (Badger)| Length = 379 Score = 33.1 bits (74), Expect = 2.8 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = +1 Query: 136 FFASISLLYIFVTMGGLSMEHPWAFTFGLLGNVISFSSLLAPIPT 270 F+ ++ L I +GG +EHP+ T G L +++ F+ LLA +PT Sbjct: 325 FWLLVADLLILTWIGGQPVEHPY-ITIGQLASILYFTILLALMPT 368
>Q58770:Y1375_METJA Uncharacterized membrane protein MJ1375 - Methanococcus jannaschii| Length = 415 Score = 32.7 bits (73), Expect = 3.7 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 18/161 (11%) Frame = +1 Query: 424 ETVYIIMYLVYAPRKAKIFTAKIVLLLNIAGFGLI-------FVLTLF----------AF 552 +++YI+M +Y+ A +F LL FG++ LT+F F Sbjct: 6 DSIYILMSNLYSKGMAYLFYFITAFLLGTEAFGILKGLMPIADTLTIFFSSGIPPAIAKF 65 Query: 553 HGETRVVSLGWICVGFSVCVFVAPLSIIGRVIKTKSVEYMPFSL-SLTLTLSAIVWFLYG 729 E + V + + + LS++G ++ Y+ + L L L I++F G Sbjct: 66 LAEEKEVDINKY---IPILYLMILLSVVGFIL----TPYIKYILGGHYLNLPNILYFAVG 118 Query: 730 LLIKDKYVALPNILGFTFGMIQMVLYMFYMNATPVVATDAK 852 L V ++ F+ G++Q +L M Y++ T +V AK Sbjct: 119 LC-----VVASTVIAFSRGILQGLLKMKYLSLTWIVEYTAK 154
>Q9PR97:Y048_UREPA Uncharacterized protein UU048 - Ureaplasma parvum (Ureaplasma| urealyticum biotype 1) Length = 496 Score = 32.7 bits (73), Expect = 3.7 Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 12/155 (7%) Frame = +1 Query: 322 YVVALFSAM-LWIFYAL--------VKTGEGLLITINAAGCVIETVYIIMYLVYAPRKAK 474 +++ LFSA+ +W+ + G L+ + + +I+Y+V+ +K Sbjct: 287 FILLLFSAIFIWLLRVFAYKHENENLPVGNNHLLWVYILQSFFAIIILILYMVFTLKKRL 346 Query: 475 IFTAKIVLLLNIAGFGLIFVLTLF--AFHGETRVVSLGWICVGFSVCVFVAPLSII-GRV 645 + + LLN+ I L+LF VVSL + + +V + V + I + Sbjct: 347 SVKSSLNTLLNLVVTQTILSLSLFLVTLFNSKSVVSLINVFITITVQMSVFGIYIFQNKN 406 Query: 646 IKTKSVEYMPFSLSLTLTLSAIVWFLYGLLIKDKY 750 I TK + + + L + +AIV F Y LL D + Sbjct: 407 ISTKLLVLLKVIMILIILTAAIVGFDY-LLTSDHH 440
>Q8C419:GP158_MOUSE Probable G-protein coupled receptor 158 precursor - Mus musculus| (Mouse) Length = 1200 Score = 32.7 bits (73), Expect = 3.7 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 13/112 (11%) Frame = +1 Query: 433 YIIMYLVYAPRKAKIFTAKIVLLLNIAGFG---LIFVLTLFAFHGET-RVVSLGWI-CVG 597 ++ M +VY RKAK A ++LL FG L F + + F T R + L W +G Sbjct: 432 FVSMLVVYHFRKAKSIRASGLILLETILFGSLLLYFPVVILYFEPSTFRCILLRWARLLG 491 Query: 598 FSVCVFVAPLSI--IGRVIKTKSVEYMPFSLS------LTLTLSAIVWFLYG 729 F+ L + + +V +++ + +P+ L + + + WFL G Sbjct: 492 FATVYGTVTLKLHRVLKVFLSRTAQRIPYMTGGRVMRMLAVIVLVVFWFLVG 543
>Q49HI0:TS1R2_CANFA Taste receptor type 1 member 2 precursor - Canis familiaris (Dog)| Length = 836 Score = 32.3 bits (72), Expect = 4.8 Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 1/165 (0%) Frame = +1 Query: 319 PYVVALFSAMLWIFYALVKTGEGLLITINAAGCVIETVYIIMYLVYAPRKAKIFTAKIVL 498 PYV F A + ++ G L T N IM L R+A +F + L Sbjct: 677 PYV---FVASFMVLKVVIVAGNVLATTANPTARPDPDDPNIMVLSCNYRRALLFNTSLDL 733 Query: 499 LLNIAGFGLIFV-LTLFAFHGETRVVSLGWICVGFSVCVFVAPLSIIGRVIKTKSVEYMP 675 LL++AGF ++ L + E + ++L C+ F Y Sbjct: 734 LLSVAGFSFAYMGKELPTNYNEAKFITL---CMTF----------------------YFT 768 Query: 676 FSLSLTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGMIQMVLYM 810 S+SL +S L +L D + + N+LG +FG YM Sbjct: 769 SSVSLCTFMSVYDGVLVTIL--DLLITVLNLLGISFGYFGPKCYM 811
>Q8N139:ABCA6_HUMAN ATP-binding cassette sub-family A member 6 - Homo sapiens (Human)| Length = 1617 Score = 32.3 bits (72), Expect = 4.8 Identities = 28/144 (19%), Positives = 61/144 (42%), Gaps = 10/144 (6%) Frame = +1 Query: 232 VISFSSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAA 411 ++ F +P+ F + +K + +++ ++ L + W+ + L+ G +I+I Sbjct: 224 ILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQDSAFWLSWGLIYAGFIFIISIFVT 283 Query: 412 GCVIET----------VYIIMYLVYAPRKAKIFTAKIVLLLNIAGFGLIFVLTLFAFHGE 561 + T ++I+ +L A +F ++L + ++F+LTLF Sbjct: 284 IIITFTQIIVMTGFMVIFILFFLYGLSLVALVFLMSVLLKKAVLTNLVVFLLTLF----- 338 Query: 562 TRVVSLGWICVGFSVCVFVAPLSI 633 W C+GF+V P S+ Sbjct: 339 -------WGCLGFTVFYEQLPSSL 355
>A1AW91:UPPP_RUTMC Undecaprenyl-diphosphatase - Ruthia magnifica subsp. Calyptogena| magnifica Length = 266 Score = 32.0 bits (71), Expect = 6.2 Identities = 25/91 (27%), Positives = 44/91 (48%) Frame = +1 Query: 448 LVYAPRKAKIFTAKIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWICVGFSVCVFVAPL 627 LV RK I + LL+I L +L L + + ++V++ + +GF V A + Sbjct: 177 LVGLSRKLSI---QFAFLLSIPVISLSLILILIDLYHQAQLVNVSLLAMGFVVAAISAYV 233 Query: 628 SIIGRVIKTKSVEYMPFSLSLTLTLSAIVWF 720 +I+ + +V MPF + LTL ++F Sbjct: 234 TIVFFIKLIDAVGMMPFVI-YRLTLGIFLFF 263
>O43869:OR2T1_HUMAN Olfactory receptor 2T1 - Homo sapiens (Human)| Length = 311 Score = 32.0 bits (71), Expect = 6.2 Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 2/144 (1%) Frame = +1 Query: 385 GLLITINAAGCVIETVYIIMYLVYAPRKAKIFTAKIVLLLNIAGFGLIFVLTLFAFHGET 564 GL +G + + II + IF + L L+ + L+ L+L Sbjct: 15 GLFNRKETSGLIFAIISIIFFTALMANGVMIFLIQTDLRLHTPMYFLLSHLSL------- 67 Query: 565 RVVSLGWICVGFSVCVFVAPLSIIGRVIKTKSVEYMPFSLS--LTLTLSAIVWFLYGLLI 738 + + +I + P ++ ++ +++ ++ + L LTL +FL GL+ Sbjct: 68 --IDMMYIST-------IVPKMLVNYLLDQRTISFVGCTAQHFLYLTLVGAEFFLLGLMA 118 Query: 739 KDKYVALPNILGFTFGMIQMVLYM 810 D+YVA+ N L + M + V +M Sbjct: 119 YDRYVAICNPLRYPVLMSRRVCWM 142
>Q8NH04:O2T27_HUMAN Olfactory receptor 2T27 - Homo sapiens (Human)| Length = 317 Score = 32.0 bits (71), Expect = 6.2 Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +1 Query: 616 VAPLSIIGRVIKTKSVEYMPFSLS--LTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGM 789 + P ++ +V+ +++ + + L LTL+ +FL GL+ D+YVA+ N L + M Sbjct: 77 IVPKMLVDQVMSQRAISFAGCTAQHFLYLTLAGAEFFLLGLMSYDRYVAICNPLHYPVLM 136 Query: 790 IQMVLYM 810 + + ++ Sbjct: 137 SRKICWL 143
>P48280:FTSW_CYAPA Cell division protein ftsW homolog - Cyanophora paradoxa| Length = 397 Score = 31.6 bits (70), Expect = 8.1 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 8/157 (5%) Frame = +1 Query: 142 ASISLLYIFVTMGGLSMEHPWAFTFG--LLGNVISFSSL------LAPIPTFYRIFKSKS 297 ++ SLL I + + GL PW + G +G ++ +S+ L+ I +F +K Sbjct: 194 STASLLGITLWLMGLCANFPWKYLLGTVFVGLSMAITSISLKPYQLSRITSFLDPWKDPR 253 Query: 298 TEGFQSVPYVVALFSAMLWIFYALVKTGEGLLITINAAGCVIETVYIIMYLVYAPRKAKI 477 +G+Q V ++ + S ++ G G I++ G + ++ VY I Sbjct: 254 GKGYQLVQSLITIGSGGIF--------GTGYGISLQKTGYLPIHYTDFIFAVYIEEFGFI 305 Query: 478 FTAKIVLLLNIAGFGLIFVLTLFAFHGETRVVSLGWI 588 ++LL+ I F L+ + L H R+V G I Sbjct: 306 GAVSLLLLI-IFYFLLVITVILKTNHPVLRLVGCGAI 341
>O54069:COX1_RICPR Probable cytochrome c oxidase subunit 1 - Rickettsia prowazekii| Length = 534 Score = 31.6 bits (70), Expect = 8.1 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%) Frame = +1 Query: 202 WA---FTFGLLGNVISF---SSLLAPIPTFYRIFKSKSTEGFQSVPYVVALFSAMLWIFY 363 WA FT GL N + + +++ +PT +IF +T S+ + + A+ +I Sbjct: 307 WAHHMFTVGLSYNALIYFTAGTMIIAVPTGIKIFSWIATMWGGSITFPTPMLFAIGFIIL 366 Query: 364 ALVKTGEGLLITINAAGCVI-ETVYIIMYLVYAPRKAKIFTA 486 + G++++ +A V+ +T Y++ + Y +FTA Sbjct: 367 FTIGGVTGIILSNSALDRVLHDTYYVVAHFHYTMSLGALFTA 408 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 198,280,407 Number of extensions: 4130185 Number of successful extensions: 13202 Number of sequences better than 10.0: 14 Number of HSP's gapped: 13194 Number of HSP's successfully gapped: 14 Length of query: 458 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 341 Effective length of database: 68,593,924 Effective search space: 23390528084 Effective search space used: 23390528084 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)