>Q8BI69:ZN784_MOUSE Zinc finger protein 784 - Mus musculus (Mouse)|
          Length = 297
 Score = 31.6 bits (70), Expect = 3.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 216 VSSSTPDLKLPPDSARKRTDPSNPDLWPSHDATMTYGRPVTPPHD 350
           ++++ PD  +P    R+   P  PDL       +  GRPVTPP D
Sbjct: 1   MAAARPDPPIPSSPTRESPSPEPPDL-----VLVPDGRPVTPPGD 40

>O70165:FCN1_MOUSE Ficolin-1 precursor - Mus musculus (Mouse)|
          Length = 334

 Score = 25.4 bits (54), Expect(2) = 3.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 295 HRSGLDGSVRFLAESGGSLRSGVLELTGCGHGFMWHLPEKRER 167
           H+S L+G  R+L+ S  S   G+   TG GH + + + E + R
Sbjct: 292 HQSNLNG--RYLSGSHESYADGINWGTGQGHHYSYKVAEMKIR 332



 Score = 24.6 bits (52), Expect(2) = 3.7
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 453 GGSLARWR-LGFDQHHQRQEPNAVVGSRRRSGAWWRH 346
           G SL +   + F  H Q  + N++  +    GAWW H
Sbjct: 253 GDSLTKHNNMSFTTHDQDNDANSMNCAALFHGAWWYH 289

>P14780:MMP9_HUMAN Matrix metalloproteinase-9 precursor - Homo sapiens (Human)|
          Length = 707

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 18  PRVPPSASPTQPPLGAPSTAS 80
           P  PPSA PT PP   PSTA+
Sbjct: 485 PTGPPSAGPTGPPTAGPSTAT 505

>Q98Q24:RPOC_MYCPU DNA-directed RNA polymerase beta' chain - Mycoplasma pulmonis|
          Length = 1426

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 234 DLKLPPDSARKRTDPSNPDLWPSHDATMTYGRPV 335
           ++ L   SARK  D  NP +WP H A +  GRPV
Sbjct: 463 EITLSVKSARKLIDNLNPIIWP-HVAKVIQGRPV 495

>Q5R7S4:FA40A_PONPY Protein FAM40A - Pongo pygmaeus (Orangutan)|
          Length = 837

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   QPWPRVPPSASPTQPPLGAPSTASELQQAG 98
           QP P  PP  +  QPP GAP  A+ L   G
Sbjct: 17  QPQPPPPPPPATAQPPPGAPRAAAGLLPGG 46

>Q5VSL9:FA40A_HUMAN Protein FAM40A - Homo sapiens (Human)|
          Length = 837

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 9   QPWPRVPPSASPTQPPLGAPSTASELQQAG 98
           QP P  PP  +  QPP GAP  A+ L   G
Sbjct: 17  QPQPPPPPPPAAAQPPPGAPRAAAGLLPGG 46

>Q8C079:FA40A_MOUSE Protein FAM40A - Mus musculus (Mouse)|
          Length = 837

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +3

Query: 9   QPWPRVPPSASPTQPPLGAPSTASELQQAG 98
           QP P  PP  +  QPP GAP  A  L   G
Sbjct: 17  QPQPPPPPPPATAQPPPGAPRAAGGLLPGG 46


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 113,183,399
Number of extensions: 2278472
Number of successful extensions: 8115
Number of sequences better than 10.0: 7
Number of HSP's gapped: 8072
Number of HSP's successfully gapped: 8
Length of query: 239
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 129
Effective length of database: 70,513,989
Effective search space: 9096304581
Effective search space used: 9096304581
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)