ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf141n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC084466.1|AC084466 Caenorhabditis briggsae cosmid CB041P18, ... 48 0.044
2gb|AC021517.9| Homo sapiens chromosome 18, clone RP11-309E23, co... 44 0.68
3emb|CU207366.1| Gramella forsetii KT0803 complete genome 42 2.7
4gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 42 2.7
5gb|U39745.1| Caenorhabditis elegans cosmid F41C6, complete sequence 42 2.7
6gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 2.7
7emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 i... 42 2.7
8emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ... 42 2.7
9gb|AC120113.2| Homo sapiens chromosome 5 clone CTD-2324F19, comp... 42 2.7
10gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 42 2.7
11gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 2.7
12gb|M80241.1|CELUNC6A Caenorhabditis elegans unc-6 gene, complete... 42 2.7

>gb|AC084466.1|AC084466 Caenorhabditis briggsae cosmid CB041P18, complete sequence
          Length = 74747
 Score = 48.1 bits (24), Expect = 0.044
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 614   ttttattataaaaaggcaaaatga 637
             ||||||||||||||||||||||||
Sbjct: 24112 ttttattataaaaaggcaaaatga 24135



to top

>gb|AC021517.9| Homo sapiens chromosome 18, clone RP11-309E23, complete sequence
          Length = 160904

 Score = 44.1 bits (22), Expect = 0.68
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 682    ataaaactggagattttttttt 703
              ||||||||||||||||||||||
Sbjct: 106106 ataaaactggagattttttttt 106127



to top

>emb|CU207366.1| Gramella forsetii KT0803 complete genome
          Length = 3798465

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 608     caggggttttattataaaaag 628
               |||||||||||||||||||||
Sbjct: 2425080 caggggttttattataaaaag 2425100



to top

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 23     cgtgccgcccagcgcctcgccgacc 47
              |||||||||||||||| ||||||||
Sbjct: 190501 cgtgccgcccagcgccacgccgacc 190525



to top

>gb|U39745.1| Caenorhabditis elegans cosmid F41C6, complete sequence
          Length = 30847

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 681   cataaaactggagatttttttttgc 705
             |||||||||||||| ||||||||||
Sbjct: 19795 cataaaactggagaattttttttgc 19771



to top

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 15      tggcctcgcgtgccgcccagc 35
               |||||||||||||||||||||
Sbjct: 1829101 tggcctcgcgtgccgcccagc 1829081



to top

>emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 in linkage group 5,
              complete sequence
          Length = 166407

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 614    ttttattataaaaaggcaaaa 634
              |||||||||||||||||||||
Sbjct: 108721 ttttattataaaaaggcaaaa 108741



to top

>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16,
             complete sequence
          Length = 92059

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 683   taaaactggagattttttttt 703
             |||||||||||||||||||||
Sbjct: 74983 taaaactggagattttttttt 74963



to top

>gb|AC120113.2| Homo sapiens chromosome 5 clone CTD-2324F19, complete sequence
          Length = 129346

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 616   ttattataaaaaggcaaaatg 636
             |||||||||||||||||||||
Sbjct: 94447 ttattataaaaaggcaaaatg 94427



to top

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 23      cgtgccgcccagcgcctcgcc 43
               |||||||||||||||||||||
Sbjct: 2565075 cgtgccgcccagcgcctcgcc 2565095



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 26      gccgcccagcgcctcgccgacccag 50
               |||||||||| ||||||||||||||
Sbjct: 2184902 gccgcccagctcctcgccgacccag 2184878



to top

>gb|M80241.1|CELUNC6A Caenorhabditis elegans unc-6 gene, complete cds
          Length = 11123

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 681 cataaaactggagatttttttttgc 705
           |||||||||||||| ||||||||||
Sbjct: 922 cataaaactggagaattttttttgc 898


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 99,771,771
Number of extensions: 5276047
Number of successful extensions: 97272
Number of sequences better than 10.0: 12
Number of HSP's gapped: 97272
Number of HSP's successfully gapped: 12
Length of query: 719
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 697
Effective length of database: 18,508,616,841
Effective search space: 12900505938177
Effective search space used: 12900505938177
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top