ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf141m19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064108:Os09g0498100 87 6e-18
2AK064304:Os08g0517900 84 5e-17
3AK072520:Os10g0503100 28 5.4
4AK103731:Os08g0528900 28 5.5
5AK065800:Os08g0528900 28 5.5
6Os10g0568600:Os10g0568600 27 7.1
7AK110287: 27 9.2

>AK064108:Os09g0498100 |
          Length = 136
 Score = 87.4 bits (215), Expect = 6e-18
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = +3

Query: 180 MVVRIRLTRFGCRNRPFYRVMAADSRWLRDGKHLEVLGYYNPLP 311
           MVVRIRL RFGCRNRPFYRVMAADSR  RDGKHLEVLGYYNPLP
Sbjct: 1   MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLP 44



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>AK064304:Os08g0517900 |
          Length = 137

 Score = 84.3 bits (207), Expect = 5e-17
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +3

Query: 180 MVVRIRLTRFGCRNRPFYRVMAADSRWLRDGKHLEVLGYYNPLP 311
           MVVRIRL RFGCRNRPFYR+MAADSR  RDGKHLEVLGYY+PLP
Sbjct: 1   MVVRIRLARFGCRNRPFYRLMAADSRSPRDGKHLEVLGYYDPLP 44



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>AK072520:Os10g0503100 |
          Length = 224

 Score = 27.7 bits (60), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 263 QPAAVGSHHPVEGPVAAAEPREPDPD 186
           +PA+  + + VE  VA AEP + DP+
Sbjct: 171 KPASAAAENTVESEVAVAEPAKEDPE 196



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>AK103731:Os08g0528900 |
          Length = 343

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 78  WESLVGDEGDEIGSGEVQSGGWLG 7
           +E   G EGDEIG+G  +SGG  G
Sbjct: 167 FEGDYGREGDEIGNGISESGGMRG 190



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>AK065800:Os08g0528900 |
          Length = 343

 Score = 27.7 bits (60), Expect = 5.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 78  WESLVGDEGDEIGSGEVQSGGWLG 7
           +E   G EGDEIG+G  +SGG  G
Sbjct: 167 FEGDYGREGDEIGNGISESGGMRG 190



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>Os10g0568600:Os10g0568600 |
          Length = 691

 Score = 27.3 bits (59), Expect = 7.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 317 NIGERVVVAQDLEVLAVAQPAAVGSHH 237
           N G R++V   +E +A A   A+G HH
Sbjct: 53  NRGSRIIVTTRIEAVAKACSPAIGGHH 79



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>AK110287: |
          Length = 856

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 341 CDET*MKANIGERVVVAQDLEVLAVAQPAAVGSHHPVEGPVAA 213
           CDE      + E+ V +QD +  A AQPAA G+ +  +G   A
Sbjct: 803 CDE------VHEKPVFSQDTQPAAAAQPAAGGAGNGNKGAATA 839


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,192,417
Number of extensions: 301712
Number of successful extensions: 1025
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1025
Number of HSP's successfully gapped: 7
Length of query: 189
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 94
Effective length of database: 11,595,960
Effective search space: 1090020240
Effective search space used: 1090020240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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