ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf141l08 |
|---|---|
| Clone Library Name | barley_pub |
>AK059562:Os05g0292800 | Length = 112 Score = 130 bits (328), Expect = 5e-31 Identities = 59/73 (80%), Positives = 71/73 (97%) Frame = +3 Query: 213 RVRAAKLPAGVQVPRAQPKLSEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEI 392 ++RAAKLPAGV+VPR QPKLSEPFLGFT+TAE+WNSRACM+GLIGTFIVEL+L+KG+L++ Sbjct: 40 KIRAAKLPAGVEVPRKQPKLSEPFLGFTRTAEIWNSRACMIGLIGTFIVELVLNKGILQM 99 Query: 393 IGFEVGKGLDIPL 431 IG EVGKGLD+PL Sbjct: 100 IGVEVGKGLDLPL 112
>AK120556:Os12g0480100 | Length = 113 Score = 127 bits (319), Expect = 5e-30 Identities = 69/103 (66%), Positives = 75/103 (72%), Gaps = 4/103 (3%) Frame = +3 Query: 135 PSLLAVQTFRGQ----KXXXXXXXXXXXXFRVRAAKLPAGVQVPRAQPKLSEPFLGFTKT 302 PSLLA+Q Q K R RAA+LPAGV VPR QPKLSEPFLGFTKT Sbjct: 11 PSLLAIQFQPLQNNRFKRNNPAISARARTVRARAAELPAGVVVPREQPKLSEPFLGFTKT 70 Query: 303 AEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL 431 AEVWNSRACM+GLIG FIVEL+L KGVL+ IG EVGKGLD+PL Sbjct: 71 AEVWNSRACMIGLIGVFIVELVLSKGVLQTIGLEVGKGLDLPL 113
>AK104275:Os01g0869800 | Length = 268 Score = 35.0 bits (79), Expect = 0.036 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +3 Query: 285 LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*SALPCL 452 +GFTK E++ R M+G + + E I KG+L + E G IP+ A P L Sbjct: 86 IGFTKENELFVGRVAMLGFAASILGEAITGKGILAQLNLETG----IPIYEAEPLL 137
>AK071827:Os01g0869800 | Length = 268 Score = 35.0 bits (79), Expect = 0.036 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +3 Query: 285 LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*SALPCL 452 +GFTK E++ R M+G + + E I KG+L + E G IP+ A P L Sbjct: 86 IGFTKENELFVGRVAMLGFAASILGEAITGKGILAQLNLETG----IPIYEAEPLL 137
>AK058284:Os01g0869800 | Length = 268 Score = 35.0 bits (79), Expect = 0.036 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = +3 Query: 285 LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*SALPCL 452 +GFTK E++ R M+G + + E I KG+L + E G IP+ A P L Sbjct: 86 IGFTKENELFVGRVAMLGFAASILGEAITGKGILAQLNLETG----IPIYEAEPLL 137
>AB007120:Os05g0361200 | Length = 491 Score = 34.7 bits (78), Expect = 0.047 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +3 Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386 G+TK+AE WN RA M+ ++ ++E+ +G L Sbjct: 449 GWTKSAETWNGRAAMLAVLALLVLEVTTGEGFL 481
>D84392:Os04g0690800 | Length = 254 Score = 34.7 bits (78), Expect = 0.047 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +3 Query: 285 LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*SALPCL 452 +GFTK E++ R M+G + + E + KG+L + E G IP+ A P L Sbjct: 73 IGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETG----IPIYEAEPLL 124
>AK073873:Os05g0361200 | Length = 526 Score = 34.7 bits (78), Expect = 0.047 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +3 Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386 G+TK+AE WN RA M+ ++ ++E+ +G L Sbjct: 484 GWTKSAETWNGRAAMLAVLALLVLEVTTGEGFL 516
>AK071638:Os04g0690800 | Length = 254 Score = 34.7 bits (78), Expect = 0.047 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +3 Query: 285 LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*SALPCL 452 +GFTK E++ R M+G + + E + KG+L + E G IP+ A P L Sbjct: 73 IGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETG----IPIYEAEPLL 124
>AK062212:Os05g0361200 | Length = 125 Score = 34.7 bits (78), Expect = 0.047 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +3 Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386 G+TK+AE WN RA M+ ++ ++E+ +G L Sbjct: 83 GWTKSAETWNGRAAMLAVLALLVLEVTTGEGFL 115
>AK062972:Os01g0246400 | Length = 202 Score = 30.0 bits (66), Expect = 1.2 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 210 FRVRAAKLPAGVQVPRAQPKLSEPFLG--FTKTAEVWNSRACMMGLIGTFIVELI 368 F AA L A VP + + +E G + AE+WN R M+GL+ E + Sbjct: 140 FAATAAVLSAASLVPLLRGETAEARSGGVMSADAELWNGRFAMLGLVALAFTEFL 194
>Os07g0178700:Os07g0178700 | Length = 200 Score = 29.6 bits (65), Expect = 1.5 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 210 FRVRAAKLPAGVQVPRAQPKLSEPFLG--FTKTAEVWNSRACMMGLIGTFIVELI 368 F AA L A VP + + +E G + AE+WN R M+GL+ E + Sbjct: 138 FAATAAVLSAASLVPLLRGESAEARSGGVMSADAELWNGRFAMLGLVALAFTEFL 192
>AK105206:Os02g0724200 | Length = 121 Score = 29.6 bits (65), Expect = 1.5 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -1 Query: 83 ATGSWQGRRKSRPGLQCNNGWEGRERP 3 AT +W+GRR+ R GW R P Sbjct: 46 ATAAWRGRRRRRCSTTARGGWRRRSSP 72
>AB071296:Os06g0702600 | Length = 1123 Score = 28.1 bits (61), Expect = 4.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 400 KPIISRTPLCNISSTMKVPMSPIMQALEFQTSAVLVNPR 284 +PI+ R C++ +T KVP S ++ AV PR Sbjct: 762 QPILGRNKHCSMINTEKVPQSAAPMSVPSSLEAVTATPR 800
>AF017356:Os07g0178800 | Length = 192 Score = 28.1 bits (61), Expect = 4.4 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = +3 Query: 210 FRVRAAKLPAGVQVPRAQPKLSEPFLG--FTKTAEVWNSRACMMGLIGTFIVELI 368 F A L A VP + + +E G + AE+WN R M+GL+ E + Sbjct: 130 FAATATVLSAASLVPLLRGESAEARSGGVMSADAELWNGRFAMLGLVALAFTEFL 184
>Os04g0509400:Os04g0509400 | Length = 323 Score = 27.7 bits (60), Expect = 5.7 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -1 Query: 329 AGPGVPDLGGLGEPEERLTQLGLRPWHLDSGRKLGCP 219 AGP + PE RL QLG++ W K GCP Sbjct: 83 AGPSLSITVEKNPPEARLLQLGIKSW-----PKWGCP 114
>Os03g0770700:Os03g0770700 | Length = 635 Score = 27.7 bits (60), Expect = 5.7 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +2 Query: 188 PLTESGRFQSPGSQASCRSPGATGAAQAE*AVPRVHQDRRGLELQGLHDGTHR 346 PLT S S GSQ+SC + A A + A+ V + R G + G HR Sbjct: 243 PLTLS--MSSAGSQSSCVTVQAAAAGEPYMAMDAVSKKRGGADRAGQKQPVHR 293
>AJ575227:Os01g0825700 | Length = 234 Score = 27.7 bits (60), Expect = 5.7 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 79 VAPWLISVQQWPWPPWFMHRLS*QSRPSADRRMLPLTAHRERP 207 VAPW S Q +P PPW + PS + ++E+P Sbjct: 125 VAPWAQSGQYYPAPPW-------AAPPSVNSNPFQSATYQEQP 160
>AK120176:Os12g0435200 | Length = 576 Score = 27.7 bits (60), Expect = 5.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 469 HQHLIGRQGRADYRGISRPFPTSKPI 392 HQ +GR+ R Y G+S P P K I Sbjct: 450 HQGYVGRKNRYGYFGVSGPLPKIKGI 475
>AK070492:Os01g0825700 | Length = 597 Score = 27.7 bits (60), Expect = 5.7 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 79 VAPWLISVQQWPWPPWFMHRLS*QSRPSADRRMLPLTAHRERP 207 VAPW S Q +P PPW + PS + ++E+P Sbjct: 453 VAPWAQSGQYYPAPPW-------AAPPSVNSNPFQSATYQEQP 488
>AK068931:Os02g0148500 | Length = 328 Score = 27.7 bits (60), Expect = 5.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -1 Query: 449 AGESRLQRNIEAFPHFETDYLKNTFVQYQLHDEGPDESHHAGPGVP 312 A E+ + +EA +E + +Y+ +EG +E + G GVP Sbjct: 29 ADEAEAEAEVEAMERYEQEQ------EYEEGEEGEEEEYEGGEGVP 68
>AY151044:Os10g0561400 | Length = 318 Score = 27.3 bits (59), Expect = 7.5 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%) Frame = -2 Query: 472 EHQH-LIGRQ--GRADYRGISRPFPTSKPIISRTP 377 EH+ L+G Q G+ D+RGISR F ++SRTP Sbjct: 100 EHRRFLLGLQKLGKGDWRGISRNF-----VVSRTP 129
>AK101062:Os10g0561400 | Length = 318 Score = 27.3 bits (59), Expect = 7.5 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%) Frame = -2 Query: 472 EHQH-LIGRQ--GRADYRGISRPFPTSKPIISRTP 377 EH+ L+G Q G+ D+RGISR F ++SRTP Sbjct: 100 EHRRFLLGLQKLGKGDWRGISRNF-----VVSRTP 129
>AK066961:Os10g0561400 | Length = 234 Score = 27.3 bits (59), Expect = 7.5 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%) Frame = -2 Query: 472 EHQH-LIGRQ--GRADYRGISRPFPTSKPIISRTP 377 EH+ L+G Q G+ D+RGISR F ++SRTP Sbjct: 16 EHRRFLLGLQKLGKGDWRGISRNF-----VVSRTP 45
>AK059716:Os10g0561400 | Length = 235 Score = 27.3 bits (59), Expect = 7.5 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 3/35 (8%) Frame = -2 Query: 472 EHQH-LIGRQ--GRADYRGISRPFPTSKPIISRTP 377 EH+ L+G Q G+ D+RGISR F ++SRTP Sbjct: 17 EHRRFLLGLQKLGKGDWRGISRNF-----VVSRTP 46
>Os03g0306200:Os03g0306200 | Length = 1613 Score = 26.9 bits (58), Expect = 9.7 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 368 YQLHDEGPDESHHAGPGVPDLG-GLGEPEERLTQL-GLRPWHLDSGR 234 + LHDEG + H G+ + L E ++ T L + WHLD + Sbjct: 1175 HMLHDEGSALNQHTNDGILTVSKSLPERTDKSTSLDDSKKWHLDPAK 1221
>Os02g0577300:Os02g0577300 | Length = 728 Score = 26.9 bits (58), Expect = 9.7 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = +1 Query: 64 PCQLPVAPWLISVQQWP---WPPW 126 P + P + W IS ++WP +PPW Sbjct: 611 PHRNPESKWYISPEEWPEEKYPPW 634
>AB110202:Os07g0301200 | Length = 408 Score = 26.9 bits (58), Expect = 9.7 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 484 LSSPEHQHLIGRQGRADYRGISRPFPTSK 398 L++ ++ H IGR GRA +G++ F T + Sbjct: 317 LTTEDYVHRIGRTGRAGKKGVAHTFFTQE 345
>AK120993: | Length = 340 Score = 26.9 bits (58), Expect = 9.7 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 157 PSADRRMLPLTAHRERPLSESGQPS 231 PS+ R LPL++HR P S PS Sbjct: 40 PSSRRCRLPLSSHRRAPPSSPADPS 64
>AK102570:Os07g0301200 | Length = 270 Score = 26.9 bits (58), Expect = 9.7 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 484 LSSPEHQHLIGRQGRADYRGISRPFPTSK 398 L++ ++ H IGR GRA +G++ F T + Sbjct: 179 LTTEDYVHRIGRTGRAGKKGVAHTFFTQE 207
>AK073463:Os07g0301200 | Length = 512 Score = 26.9 bits (58), Expect = 9.7 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 484 LSSPEHQHLIGRQGRADYRGISRPFPTSK 398 L++ ++ H IGR GRA +G++ F T + Sbjct: 421 LTTEDYVHRIGRTGRAGKKGVAHTFFTQE 449 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,901,042 Number of extensions: 423020 Number of successful extensions: 1343 Number of sequences better than 10.0: 31 Number of HSP's gapped: 1343 Number of HSP's successfully gapped: 31 Length of query: 193 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 98 Effective length of database: 11,595,960 Effective search space: 1136404080 Effective search space used: 1136404080 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
