>P51355:YCF17_PORPU Uncharacterized protein ycf17 - Porphyra purpurea|
          Length = 48
 Score = 41.2 bits (95), Expect = 0.003
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 282 FLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           F GFT +AE WN R  M+G +    +EL+  KG+L + G
Sbjct: 7   FWGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSG 45

>Q1XDD2:YCF17_PORYE Uncharacterized protein ycf17 - Porphyra yezoensis|
          Length = 48

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           GFT +AE WN R  M+G I    +E++  +G+L +IG
Sbjct: 9   GFTDSAETWNGRFAMIGFISVIFIEVVTGQGLLYLIG 45

>Q9SMB4:PSBS_TOBAC Photosystem II 22 kDa protein, chloroplast precursor - Nicotiana|
           tabacum (Common tobacco)
          Length = 274

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +3

Query: 225 AKLPAGVQVPRAQPKLSEPF------LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386
           AK PA   VP+ + K+ +        +GFTK  E++  R  M+G   + + E I  KG+L
Sbjct: 65  AKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGIL 124

Query: 387 EIIGFEVGKGLDIPL*SALPCL 452
             +  E G    IP+  A P L
Sbjct: 125 AQLNLETG----IPIYEAEPLL 142

>Q8YQR8:HEMH_ANASP Ferrochelatase - Anabaena sp. (strain PCC 7120)|
          Length = 388

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 18/37 (48%), Positives = 25/37 (67%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           G T +AEVWN R  M+G I   I+EL+  +G+L +IG
Sbjct: 350 GMTSSAEVWNGRIAMLGFI-ALIIELVTGQGLLHMIG 385

>Q9FPP4:PSBS_SOLSG Photosystem II 22 kDa protein, chloroplast precursor - Solanum|
           sogarandinum
          Length = 276

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = +3

Query: 210 FRVRAAKLPAGVQVPRAQPKLSEPF------LGFTKTAEVWNSRACMMGLIGTFIVELIL 371
           F+ +A   P  V  P+ + K+ +        +GFTK  E++  R  M+G   + + E I 
Sbjct: 62  FKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT 121

Query: 372 HKGVLEIIGFEVGKGLDIPL*SALPCL 452
            KG+L  +  E G    IP+  A P L
Sbjct: 122 GKGILAQLNLETG----IPIYEAEPLL 144

>P54773:PSBS_SOLLC Photosystem II 22 kDa protein, chloroplast precursor - Solanum|
           lycopersicum (Tomato) (Lycopersicon esculentum)
          Length = 276

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = +3

Query: 210 FRVRAAKLPAGVQVPRAQPKLSEPF------LGFTKTAEVWNSRACMMGLIGTFIVELIL 371
           F+ +A   P  V  P+ + K+ +        +GFTK  E++  R  M+G   + + E I 
Sbjct: 62  FKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT 121

Query: 372 HKGVLEIIGFEVGKGLDIPL*SALPCL 452
            KG+L  +  E G    IP+  A P L
Sbjct: 122 GKGILAQLNLETG----IPIYEAEPLL 144

>P48367:YCF17_CYAPA Uncharacterized protein ycf17 - Cyanophora paradoxa|
          Length = 49

 Score = 36.2 bits (82), Expect = 0.087
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           GFT  AE WN R  M+G I   + E +  +G L  +G
Sbjct: 11  GFTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLG 47

>P54225:HEMH_SYNY3 Ferrochelatase - Synechocystis sp. (strain PCC 6803)|
          Length = 387

 Score = 36.2 bits (82), Expect = 0.087
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           G T  AEVWN R  M+G I   +VELI  +G L  +G
Sbjct: 350 GLTTAAEVWNGRLAMLGFI-ALLVELISGQGPLHFVG 385

>O04921:HEMH2_ARATH Ferrochelatase-2, chloroplast precursor - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 512

 Score = 36.2 bits (82), Expect = 0.087
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386
           G+TK+AE WN RA M+ ++   ++E+   KG L
Sbjct: 471 GWTKSAETWNGRAAMLAVLALLVLEVTTGKGFL 503

>Q0DIV0:HEMH_ORYSJ Ferrochelatase-2, chloroplast precursor - Oryza sativa subsp.|
           japonica (Rice)
          Length = 526

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386
           G+TK+AE WN RA M+ ++   ++E+   +G L
Sbjct: 484 GWTKSAETWNGRAAMLAVLALLVLEVTTGEGFL 516

>A2Y3Q5:HEMH_ORYSI Ferrochelatase-2, chloroplast precursor - Oryza sativa subsp.|
           indica (Rice)
          Length = 526

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVL 386
           G+TK+AE WN RA M+ ++   ++E+   +G L
Sbjct: 484 GWTKSAETWNGRAAMLAVLALLVLEVTTGEGFL 516

>Q02060:PSBS_SPIOL Photosystem II 22 kDa protein, chloroplast precursor - Spinacia|
           oleracea (Spinach)
          Length = 274

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +3

Query: 225 AKLPAGVQVPRAQPKL----SEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEI 392
           AK P  V+ P+ + +     +   +GFTK  E++  R  M+G   + + E I  KG+L  
Sbjct: 68  AKAPKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQ 127

Query: 393 IGFEVGKGLDIPL*SALPCL 452
           +  E G    IP+  A P L
Sbjct: 128 LNLETG----IPIYEAEPLL 143

>Q9XF91:PSBS_ARATH Photosystem II 22 kDa protein, chloroplast precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = +3

Query: 285 LGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVGKGLDIPL*SALPCL 452
           +GFTK  E++  R  M+G   + + E +  KG+L  +  E G    IP+  A P L
Sbjct: 83  IGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETG----IPIYEAEPLL 134

>Q5N2B2:HEMH_SYNP6 Ferrochelatase - Synechococcus sp. (strain ATCC 27144 / PCC 6301 /|
           SAUG 1402/1) (Anacystis nidulans)
          Length = 387

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           G T  AEVWN R  M+G +   +VEL+  +G L  +G
Sbjct: 350 GITLNAEVWNGRIAMLGFL-ALLVELLTGRGPLHALG 385

>Q05546:TENR_RAT Tenascin-R precursor - Rattus norvegicus (Rat)|
          Length = 1356

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -1

Query: 257 PWHLDSGRKLGCPDSESGRSR*AVSGSILLSA--EGLDC*ERRCMNH-GGHGHC 105
           P+  +  R+L CP   SG+ + A +G+ L      G DC +RRC+N   G GHC
Sbjct: 255 PYTGEDCRELRCPGDCSGKGQCA-NGTCLCQEGYAGEDCSQRRCLNACSGRGHC 307

>Q8BYI9:TENR_MOUSE Tenascin-R precursor - Mus musculus (Mouse)|
          Length = 1358

 Score = 33.5 bits (75), Expect = 0.56
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -1

Query: 257 PWHLDSGRKLGCPDSESGRSR*AVSGSILLSA--EGLDC*ERRCMNH-GGHGHC 105
           P+  +  R+L CP   SG+ + A +G+ L      G DC +RRC+N   G GHC
Sbjct: 255 PYTGEDCRELRCPGDCSGKGQCA-NGTCLCQEGYAGEDCSQRRCLNACSGRGHC 307

>Q7U5G0:HEMH_SYNPX Ferrochelatase - Synechococcus sp. (strain WH8102)|
          Length = 391

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           G+  ++EVWN R  M+G    F++ELI   G L  +G
Sbjct: 354 GWNNSSEVWNGRLAMLG-FSAFLLELISGHGPLHALG 389

>Q8DGU6:HEMH_SYNEL Ferrochelatase - Synechococcus elongatus (Thermosynechococcus|
           elongatus)
          Length = 388

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           G T  AE WN R  M+G +   ++ELI  +G L ++G
Sbjct: 351 GMTSAAERWNGRLAMLGFL-ALMIELISGQGPLHMLG 386

>O78425:YCF17_GUITH Uncharacterized protein ycf17 - Guillardia theta (Cryptomonas phi)|
          Length = 53

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEII 395
           GF   AE WN R  M+  +    VE I +K VL+++
Sbjct: 15  GFNVYAENWNGRLAMISFLLIICVEFITNKNVLDLV 50

>Q7VD58:HEMH_PROMA Ferrochelatase - Prochlorococcus marinus|
          Length = 391

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 24/59 (40%), Positives = 30/59 (50%)
 Frame = +3

Query: 222 AAKLPAGVQVPRAQPKLSEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           AAKLP  V++   Q K      G+  +AEVWN R  M   I  F  EL++  G L  IG
Sbjct: 336 AAKLPEKVKL-YPQEKWQ---WGWNNSAEVWNGRVAMFVFIICFF-ELVIGNGPLHYIG 389

>Q83CY0:PYRD_COXBU Dihydroorotate dehydrogenase - Coxiella burnetii|
          Length = 347

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 231 LPAGVQVPRAQPKLSEPFLGFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIGFEVG 410
           +  G   P+ QP  S+P +     A    +R     L   ++VE +  + V  I+G  +G
Sbjct: 82  IEVGAVTPKPQPGNSKPRIFRLPQARALINRMGFNNLGVDYLVEQLKRRKVKGIVGVNIG 141

Query: 411 KGLDIPL 431
           K L  PL
Sbjct: 142 KNLTTPL 148

>Q7V6C6:HEMH_PROMM Ferrochelatase - Prochlorococcus marinus (strain MIT 9313)|
          Length = 391

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 288 GFTKTAEVWNSRACMMGLIGTFIVELILHKGVLEIIG 398
           G   ++E WN R  M+G    F++ELI   G L  IG
Sbjct: 354 GLNTSSEAWNGRIAMLG-FAAFLLELISGHGPLHAIG 389

>Q6A8I8:SYA_PROAC Alanyl-tRNA synthetase - Propionibacterium acnes|
          Length = 892

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 1   GGLSLPSQPLLHCSPGLLFLLPCQLPVAPWLISVQQWPW 117
           G   +PS  LL+  P LLF+    +P  P+L+  +  PW
Sbjct: 18  GHTVVPSASLLYNDPTLLFVNAGMVPFKPYLMGTEPSPW 56

>Q57794:Y348_METJA Uncharacterized protein MJ0348 - Methanococcus jannaschii|
          Length = 795

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +1

Query: 28  LLHCSPGLLFLLPCQLPVAPWLISVQQWPWPPWFMH 135
           LL C P +++  PC++P+      + +W W P+  +
Sbjct: 373 LLTCVPLIVYFRPCEVPLG----DINKWGWQPYIYY 404

>Q9UKE5:TNIK_HUMAN TRAF2 and NCK-interacting protein kinase - Homo sapiens (Human)|
          Length = 1360

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +2

Query: 125 GSCTVSPSSPDLPRTEECCR*PLTESGRFQSPGSQASCRSPGATGAAQ 268
           GS  +  S+PDL RTE     PL  +    S  S      P + G +Q
Sbjct: 700 GSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQGGSQ 747

>Q9Z2H4:LGR4_RAT Leucine-rich repeat-containing G-protein coupled receptor 4|
           precursor - Rattus norvegicus (Rat)
          Length = 951

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 19  SQPLLHCSPGLLFLLPCQLPVAPWLISVQQW 111
           SQ ++HC+P      PC+  +  W+I +  W
Sbjct: 516 SQIIIHCTPSTGAFKPCEYLLGSWMIRLTVW 546

>Q9BXB1:LGR4_HUMAN Leucine-rich repeat-containing G-protein coupled receptor 4|
           precursor - Homo sapiens (Human)
          Length = 951

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 19  SQPLLHCSPGLLFLLPCQLPVAPWLISVQQW 111
           SQ ++HC+P      PC+  +  W+I +  W
Sbjct: 516 SQIIIHCTPSTGAFKPCEYLLGSWMIRLTVW 546

>Q9BZE3:BARH1_HUMAN BarH-like 1 homeobox protein - Homo sapiens (Human)|
          Length = 327

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +2

Query: 104 SNGRGLHGSCTVSPSSPDLPRTEEC---CR*PLTESGRFQSPGSQASCRSPGATGAAQAE 274
           SNG G+    +    SP LP+ +     CR PL  S R +   S + C SP + G    E
Sbjct: 4   SNGFGIDSILSHRAGSPALPKGDPLLGDCRSPLELSPRSE---SSSDCSSPASPGRDCLE 60

Query: 275 *AVPR 289
              PR
Sbjct: 61  TGTPR 65


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 102,762,253
Number of extensions: 2458020
Number of successful extensions: 6625
Number of sequences better than 10.0: 28
Number of HSP's gapped: 6622
Number of HSP's successfully gapped: 28
Length of query: 193
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 86
Effective length of database: 71,336,874
Effective search space: 6134971164
Effective search space used: 6134971164
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)