ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf144f15 |
|---|---|
| Clone Library Name | barley_pub |
>AK102314:Os08g0500900 | Length = 290 Score = 231 bits (590), Expect = 4e-61 Identities = 129/187 (68%), Positives = 142/187 (75%), Gaps = 2/187 (1%) Frame = +3 Query: 129 LRCSLNPAPSQH--RRGARVGLAAKRQQCCAVACGRFLLRPNARVYTXXXXXXXXXXXXX 302 LRCS NP P Q RR ARVG ++ + AV C R P+AR Y Sbjct: 12 LRCSPNPMPKQQHERRSARVGFVSQPRPR-AVRCERSP-HPDARAYAAVAVGVVAKGREV 69 Query: 303 XXXXXVRRKRLAVFVSGGGSNFRSIHGAALGGKVNGDVVALVTDKPGCGGAEYARCNGIP 482 V R+RLAVFVSGGGSNFR+IH AALGG+VNGDVVALVTDKPGCGGAE+AR NGIP Sbjct: 70 GGVG-VERRRLAVFVSGGGSNFRAIHDAALGGEVNGDVVALVTDKPGCGGAEHARGNGIP 128 Query: 483 VVVFPKSKSAPEGVSTDELLNALRDLKVDFILLAGYLKLIPGELVQAFPRSMLNIHPSLL 662 VVVFPKSKSAPEGVS DELLNALR+L+VDFILLAGYLKLIP ELVQ +P+S+LNIHPSLL Sbjct: 129 VVVFPKSKSAPEGVSIDELLNALRELRVDFILLAGYLKLIPVELVQEYPKSILNIHPSLL 188 Query: 663 PAFGGKG 683 PAFGGKG Sbjct: 189 PAFGGKG 195 Score = 80.1 bits (196), Expect = 2e-15 Identities = 36/45 (80%), Positives = 41/45 (91%) Frame = +1 Query: 670 LEARVLHEENQVYVEAVAALCEDRIVWRDDGVPLVRSQANPNAYT 804 L ARVLHEE+QVYVEAVAALC+DRIVWR+DGVPL+RS NP+ YT Sbjct: 246 LAARVLHEEHQVYVEAVAALCDDRIVWREDGVPLIRSHTNPDEYT 290
>Os05g0270800:Os05g0270800 | Length = 238 Score = 211 bits (538), Expect = 5e-55 Identities = 106/122 (86%), Positives = 113/122 (92%) Frame = +3 Query: 318 VRRKRLAVFVSGGGSNFRSIHGAALGGKVNGDVVALVTDKPGCGGAEYARCNGIPVVVFP 497 V RKRL VFVSGGGSNFR+IH AALGG VNG VVALVTDKPGCGGAE+AR NGIPVVVFP Sbjct: 22 VERKRLVVFVSGGGSNFRAIHDAALGGDVNGVVVALVTDKPGCGGAEHARGNGIPVVVFP 81 Query: 498 KSKSAPEGVSTDELLNALRDLKVDFILLAGYLKLIPGELVQAFPRSMLNIHPSLLPAFGG 677 K KSAPEGVSTDELLN LR+L+VDFILLAGYLKLIP ELVQA+P+S+LNIHPSLLPAFGG Sbjct: 82 KLKSAPEGVSTDELLNGLRELRVDFILLAGYLKLIPVELVQAYPKSILNIHPSLLPAFGG 141 Query: 678 KG 683 KG Sbjct: 142 KG 143 Score = 79.7 bits (195), Expect = 3e-15 Identities = 35/45 (77%), Positives = 40/45 (88%) Frame = +1 Query: 670 LEARVLHEENQVYVEAVAALCEDRIVWRDDGVPLVRSQANPNAYT 804 L RVLHEE+QVYVEAV ALCEDRIVWR+DG+PL+RSQ NP+ YT Sbjct: 194 LATRVLHEEHQVYVEAVTALCEDRIVWREDGIPLIRSQTNPDEYT 238
>AK104164:Os03g0102100 | Length = 303 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +3 Query: 471 NGIPVVVFPKSKSAPEGVSTDELLNALRDLKVDFILLAGYLKLIPGELVQAFPRSMLNIH 650 +GIP P S P E+L ++ DF++LA Y++++ ++A+ + ++NIH Sbjct: 157 HGIPYHYLPTS---PGNKREQEILELVQG--TDFVVLARYMQILSEGFLKAYGKDIINIH 211 Query: 651 PSLLPAFGGKGSS 689 LLP+F G S Sbjct: 212 HGLLPSFKGGNPS 224
>AK071358:Os03g0102100 | Length = 288 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +3 Query: 471 NGIPVVVFPKSKSAPEGVSTDELLNALRDLKVDFILLAGYLKLIPGELVQAFPRSMLNIH 650 +GIP P S P E+L ++ DF++LA Y++++ ++A+ + ++NIH Sbjct: 142 HGIPYHYLPTS---PGNKREQEILELVQG--TDFVVLARYMQILSEGFLKAYGKDIINIH 196 Query: 651 PSLLPAFGGKGSS 689 LLP+F G S Sbjct: 197 HGLLPSFKGGNPS 209
>AK060329:Os03g0102100 | Length = 303 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +3 Query: 471 NGIPVVVFPKSKSAPEGVSTDELLNALRDLKVDFILLAGYLKLIPGELVQAFPRSMLNIH 650 +GIP P S P E+L ++ DF++LA Y++++ ++A+ + ++NIH Sbjct: 157 HGIPYHYLPTS---PGNKREQEILELVQG--TDFVVLARYMQILSEGFLKAYGKDIINIH 211 Query: 651 PSLLPAFGGKGSS 689 LLP+F G S Sbjct: 212 HGLLPSFKGGNPS 224
>AK069185:Os01g0687500 | Length = 362 Score = 39.7 bits (91), Expect = 0.003 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = +3 Query: 513 PEGVSTDELLNALRDLKVDFILLAGYLKLIPGELVQAFPRSMLNIHPSLLPAFGG 677 PE + L+ L++++ + + A Y ++P + P +NIHPSLLP + G Sbjct: 103 PERAGEEAFLSDLKEVRPELCITAAYGNILPQRFLDIPPYGTVNIHPSLLPLYRG 157
>AK073513:Os02g0266100 | Length = 228 Score = 32.3 bits (72), Expect = 0.52 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 431 GDERNHIPVHLPTQGGPVDRPEV-GAPAGHEHREPLPPHPGVP 306 G R +P+ LPT G P+ P+V GAP R P+ P PG+P Sbjct: 80 GVPRPRLPI-LPTPGMPLGVPQVPGAPLMPGVRPPILPAPGIP 121
>AK060957:Os02g0266100 | Length = 228 Score = 32.3 bits (72), Expect = 0.52 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 431 GDERNHIPVHLPTQGGPVDRPEV-GAPAGHEHREPLPPHPGVP 306 G R +P+ LPT G P+ P+V GAP R P+ P PG+P Sbjct: 80 GVPRPRLPI-LPTPGMPLGVPQVPGAPLMPGVRPPILPAPGIP 121
>AK106440:Os03g0318400 | Length = 434 Score = 32.0 bits (71), Expect = 0.67 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 574 MKSTFRSLRAFRSSSVETPSGADFDLGNTTTGMPLHLAYSAPPQP 440 ++S R+ R SS+ S +D G TT +HLA PPQP Sbjct: 50 LRSKARAARRLSSSASAPVSPGTYDNGVPTTEYLVHLAIGTPPQP 94
>AK072871:Os05g0269500 | Length = 722 Score = 32.0 bits (71), Expect = 0.67 Identities = 20/62 (32%), Positives = 27/62 (43%) Frame = -3 Query: 882 GENWHLVGTLGTSLIFRRSQDRDHELGIRIGVCLTSDKWDTIVSPHNSILAQGSNCLNVN 703 G+ +H+ G SL F IR+ V S WD +V P N + G N L V Sbjct: 193 GDWFHVFGIGAWSLRF----------SIRVQVKKGSSVWDVVVGPENKTVVSGDNFLRVK 242 Query: 702 LV 697 +V Sbjct: 243 VV 244
>Os04g0100300:Os04g0100300 | Length = 906 Score = 31.2 bits (69), Expect = 1.2 Identities = 27/97 (27%), Positives = 32/97 (32%), Gaps = 3/97 (3%) Frame = -1 Query: 479 NAIAPCILGATAAWLIGDERNHIPVHLPTQGGPVDRPEVGAPAGHEH---REPLPPHPGV 309 + IAP A A G + +P P GP P H H P PPHP Sbjct: 253 STIAPSAAAAAVASAGGGQ---VPAAPPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLP 309 Query: 308 PSSASHHXXXXXXXXRVYASVGAKQKPPASDGAALLP 198 P + + A GA PPA A P Sbjct: 310 PGAGAG------------AGTGAPPPPPAHPAAPAPP 334
>Os11g0446000:Os11g0446000 | Length = 481 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 Query: 416 HIPVHLPTQGGPVDRPEVGAPAGHEHREPLPPHPGVPSSASH 291 H P LP P+ P G A H P+PP PG SH Sbjct: 268 HAPPQLPPGASPLFPP--GPAAFHPSSRPMPPFPGGGKDESH 307
>AK106232:Os01g0765200 | Length = 431 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -1 Query: 425 ERNHIPVHLPTQGGPVDRPEVG-APAGHEHREPLPPHPGVP 306 +R + VH+P+ P P APA R P+PP PGVP Sbjct: 11 KRRLVEVHVPS---PAPSPSSSSAPAPASPRSPVPPPPGVP 48
>AK099686:Os02g0593700 | Length = 845 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = -1 Query: 491 HDHGNAIAPCILGATAAWLIGDE---RNHIPVHLPTQGGPVDR 372 H++G+ + P LG W+ GD+ + ++P+ +P G PVD+ Sbjct: 531 HNNGSIMWP--LGTQLIWVGGDQFALQTYVPLEIPVDGFPVDQ 571
>AK072838:Os02g0593700 | Length = 845 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = -1 Query: 491 HDHGNAIAPCILGATAAWLIGDE---RNHIPVHLPTQGGPVDR 372 H++G+ + P LG W+ GD+ + ++P+ +P G PVD+ Sbjct: 531 HNNGSIMWP--LGTQLIWVGGDQFALQTYVPLEIPVDGFPVDQ 571
>AK071429:Os02g0593700 | Length = 561 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = -1 Query: 491 HDHGNAIAPCILGATAAWLIGDE---RNHIPVHLPTQGGPVDR 372 H++G+ + P LG W+ GD+ + ++P+ +P G PVD+ Sbjct: 247 HNNGSIMWP--LGTQLIWVGGDQFALQTYVPLEIPVDGFPVDQ 287
>AK111374:Os01g0648700 | Length = 253 Score = 30.0 bits (66), Expect = 2.6 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Frame = -1 Query: 356 PAGHEHREPLPPH--PGVPSSASHHXXXXXXXXRVYASVGAKQKPPASDGAALLPLGR*A 183 P R PLPP PG P+ HH AS G PA G ALL G+ Sbjct: 17 PRPKRRRSPLPPPAPPGFPTERKHHLPELQPPAVAAASPGV-AGVPADLGDALLRCGKLL 75 Query: 182 D 180 D Sbjct: 76 D 76
>Os04g0468100:Os04g0468100 | Length = 390 Score = 29.6 bits (65), Expect = 3.3 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -1 Query: 410 PVHLPTQGGPVDRP-EVGAPAGHEHREPLPPHPGVPSSASHHXXXXXXXXRVYASVGAKQ 234 P+HLP R G P G R+ LP P ++A H + + Sbjct: 119 PLHLPRIPLQAARACRGGRPPGRRRRQRLPA-PVARAAAPLHTAPPSSPSSSPRPRHSAR 177 Query: 233 KPPASDGAALLPLGR 189 KPP+ G ALLPL R Sbjct: 178 KPPSDGGRALLPLPR 192
>Os03g0722600:Os03g0722600 | Length = 492 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 398 PTQGGPVDRPEVGAPAGHEHREPLPPHPGVPSS 300 P G PV +P+ APA PP P +PS+ Sbjct: 220 PVGGAPVSQPKATAPAPKAPGAKAPPPPALPSA 252
>AK119581:Os09g0498600 | Length = 398 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -1 Query: 398 PTQGGPVDRPEVGAPAGHEHREPLPPHP--GVP 306 P G P P AP H +EP PPHP G+P Sbjct: 193 PGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMP 225
>AK107224:Os10g0548100 | Length = 277 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -1 Query: 398 PTQGGPVDRPEVGAPAGHEHREPLPPHPGVPSSASHH 288 PT GG + P GAP PL P P P++ HH Sbjct: 7 PTCGGGITLPSTGAPL-----PPLHPTPTSPTARPHH 38
>AK107089:Os01g0758500 | Length = 195 Score = 29.6 bits (65), Expect = 3.3 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 597 LIPGELVQAFPRSMLNIHPSLLPAFGGKG 683 ++ GE+++A+P+ +L PS PA GG G Sbjct: 36 VLAGEIMKAYPKHVLRKPPSTCPADGGGG 64
>AK071683:Os08g0561500 | Length = 421 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -2 Query: 769 VGHHRLATQFDPRTRQQLPQRKLGSPHEEP 680 V HHR PRTRQ LP +L P P Sbjct: 93 VRHHRQPGLLPPRTRQHLPDLRLRHPELRP 122
>AK066995:Os09g0498600 | Length = 616 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -1 Query: 398 PTQGGPVDRPEVGAPAGHEHREPLPPHP--GVP 306 P G P P AP H +EP PPHP G+P Sbjct: 411 PGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMP 443
>Os04g0685700:Os04g0685700 | Length = 281 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -1 Query: 422 RNHIPVHLPTQGGPVDRPEVGAPAGHEHREPLPPHPG 312 R+ + V + GP++RP +P+ PLPP PG Sbjct: 232 RDAVTVGFRSLVGPIERPAKKSPSPSPSPPPLPPTPG 268
>Os12g0577700:Os12g0577700 | Length = 772 Score = 28.9 bits (63), Expect = 5.7 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 10/64 (15%) Frame = -1 Query: 452 ATAAWLIGDERN-----HIPVHLPTQGGP-----VDRPEVGAPAGHEHREPLPPHPGVPS 303 ATAA ++ +R+ H LP G VD V A H +P PP P P Sbjct: 492 ATAAAVVASQRHGHGHVHAEESLPRANGGEARLFVDMQPVPVIASKRHDDPTPPPPPPPM 551 Query: 302 SASH 291 S S+ Sbjct: 552 SRSY 555
>AK107912:Os06g0616900 | Length = 137 Score = 28.9 bits (63), Expect = 5.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 531 LWRPPLVRISTWETRPRECHCTLHTRRHRSL 439 +W PP ++ + PR C C R HRSL Sbjct: 102 VWMPPSPSVAVADPMPRRCRC--RPRHHRSL 130
>AK067892:Os06g0103800 | Length = 752 Score = 28.9 bits (63), Expect = 5.7 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 20/99 (20%) Frame = -2 Query: 715 PQRKLGSPHEEPL-PPNAGSSEGCIFSMDLGNA*TSSPGMSFK*---------------- 587 P++ P +EPL P S+ G S++ A S G+S + Sbjct: 347 PKKTDAGPEKEPLLPDKQDSNNGSASSVEGSTASVHSHGISVQQQESKRPLPAESSSQLQ 406 Query: 586 PASRMKSTFRSLRAFRSSSVETPSGADFDL---GNTTTG 479 P++ K F ++ SSSVE PS + + G T TG Sbjct: 407 PSNTKKEDFGTVSFSGSSSVEAPSSSSASIINPGQTATG 445
>Os01g0255700:Os01g0255700 | Length = 450 Score = 28.5 bits (62), Expect = 7.5 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -1 Query: 503 RLGKHDHGNAIAPCILGATAAWLIGDERNHIPVHLPTQGGPVDRPEVGAP 354 R G HDH + G AWL G ER P+ L + + P +G P Sbjct: 217 RGGVHDHEVLVLGMFRGDWCAWLTGAER-MAPIFLGIESDRLPSPFLGRP 265
>AK109487:Os01g0265800 | Length = 490 Score = 28.5 bits (62), Expect = 7.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 351 GGGSNFRSIHGAALGGKVNGDVVALVTDKPGCGG 452 G G++ S+ GAA+GG V V+ +T PG G Sbjct: 371 GYGAHSHSLPGAAVGGHVMPSPVSSLTSLPGVAG 404
>AK099896:Os01g0265800 | Length = 490 Score = 28.5 bits (62), Expect = 7.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 351 GGGSNFRSIHGAALGGKVNGDVVALVTDKPGCGG 452 G G++ S+ GAA+GG V V+ +T PG G Sbjct: 371 GYGAHSHSLPGAAVGGHVMPSPVSSLTSLPGVAG 404
>AK069528:Os12g0456200 | Length = 260 Score = 28.5 bits (62), Expect = 7.5 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -1 Query: 407 VHLPTQGGPVDRPEVGAPAGHEHREPLPPHPGVPSSAS 294 +HL G R G R PLPP P VPSS+S Sbjct: 10 LHLAAAAGAAGR-------GARRRNPLPPVPTVPSSSS 40
>AK110431: | Length = 773 Score = 28.1 bits (61), Expect = 9.7 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = -2 Query: 736 PRTRQQLPQRKL---GSPHEEPLPPNA 665 P + QQ+PQ++ +PH P+PPN+ Sbjct: 28 PTSHQQIPQQQQHHSNTPHPPPIPPNS 54
>AK106010:Os07g0599500 | Length = 208 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Frame = -1 Query: 395 TQGGPVDRPEVGAPAGHEH-----REPLPPHPGVPSSASH 291 T G R EV PA H + LPPHP VP H Sbjct: 18 TMGNAARRLEVEYPAAHPAVPELPKPELPPHPVVPELPKH 57
>AK068696:Os07g0599500 | Length = 208 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Frame = -1 Query: 395 TQGGPVDRPEVGAPAGHEH-----REPLPPHPGVPSSASH 291 T G R EV PA H + LPPHP VP H Sbjct: 18 TMGNAARRLEVEYPAAHPAVPELPKPELPPHPVVPELPKH 57 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,185,237 Number of extensions: 708204 Number of successful extensions: 2639 Number of sequences better than 10.0: 35 Number of HSP's gapped: 2631 Number of HSP's successfully gapped: 37 Length of query: 324 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 223 Effective length of database: 11,355,714 Effective search space: 2532324222 Effective search space used: 2532324222 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
