ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf149g19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056549.1| Oryza sativa (japonica cultivar-group) Os03g0332000 (Os03g0332000) mRNA, complete cds Length = 1314 Score = 676 bits (341), Expect = 0.0 Identities = 629/725 (86%) Strand = Plus / Plus Query: 398 atggggaacgtggtgttccttcacgtgagccggccagacgtggtccgggacatcaacctc 457 ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1 atggggaacgtcgtgttccttcacgtgagccggcctgacgtggttcgggacatcaacctc 60 Query: 458 tgcgtctcgctggacctcggcaagagctcctacctaaaggccacgcacgagccgctgttc 517 ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 61 tgcgtgtcgctggacctgggcaagagctcctacctcaaggcgacgcacgagcccctgttc 120 Query: 518 ggcagaggcatcctcaaatccaacggggaggcatgggcccaccagaggaagatcattgcg 577 || | |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 121 ggtgggggcatcctcaaatccaacggagaggcgtgggcacaccagagaaagatcattgcc 180 Query: 578 cctgagttctttctcgacaaggtcaagggaatggtggatctgatggtagattccgcacaa 637 | ||||||||| || |||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 181 cgtgagttcttcctggacaaggtcaagggcatggtggatctgatggtagattctgcgcaa 240 Query: 638 acgctgctcgagccatgggaagcgagggtcgacaaaagtggcggcactgtagacatcaag 697 || ||||| || ||||||||| | | ||||||| |||||| || ||||||| ||| Sbjct: 241 acactgcttaagtcatgggaagaaggaatagacaaaaatggcgggaccatagacataaag 300 Query: 698 attgacgacgacattcgagcctactccgcagatgtcatctccaggacatgcttcggaagc 757 ||||| || ||||| | || ||||| ||||| || ||||| || |||||||| |||||| Sbjct: 301 attgatgatgacataagggcttactctgcagacgttatctctagaacatgctttggaagc 360 Query: 758 agctacgtcaaaggaaagaaaatcttcctgaagctcagagaactgcagaaggccgtgtcc 817 |||||| ||||||||||||| || || | ||| |||||||||| || ||||| |||||| Sbjct: 361 agctacatcaaaggaaagaatatatttttaaagatcagagaactacaaaaggctgtgtcc 420 Query: 818 aagccaaatgtgctggctgaaatgaccggcctacggttctttcctacaaagaagaacagg 877 ||||||||||| || ||||||||||| |||||| |||| ||||| | ||||| ||||| | Sbjct: 421 aagccaaatgtactagctgaaatgactggcctaaggttttttcccataaagaggaacaag 480 Query: 878 caggcgtgggggcttcacaaacaagtgcacagactgatactagagatcgtcaaggaaagc 937 || ||||||| |||||||||||||||||||| ||| |||||||| || || ||||||||| Sbjct: 481 caagcgtgggagcttcacaaacaagtgcacaaactaatactagaaattgtgaaggaaagc 540 Query: 938 ggagaggacaagaatttactgcgtgccattcttcacagcgcaagcagcagcaaggtgggg 997 ||||| || | ||| ||||| ||||| ||||||| || ||||||||||| ||||||| | Sbjct: 541 ggagaagaaaggaacttactacgtgcaattcttcttagtgcaagcagcagtaaggtggag 600 Query: 998 ctgggcgaggcagagaactttatagtggacaactgcaagagcatatattttgcaggatac 1057 || | ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 601 ctcgctgaggcagagaactttatagtggataactgcaagagtatatattttgcaggatat 660 Query: 1058 gagagcacagctgtaacagctgcctggtgtctaatgctccttggactgcacccagaatgg 1117 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||| Sbjct: 661 gagagcacagctgtcacagctgcctggtgtctaatgctccttggactacatccagagtgg 720 Query: 1118 cagga 1122 ||||| Sbjct: 721 cagga 725 Score = 220 bits (111), Expect = 1e-53 Identities = 303/367 (82%) Strand = Plus / Plus Query: 1200 tgacgatggtgattcaggaaactctgaggctgtacccagcaggcgcgtttgtgtcaagga 1259 |||| |||||||| ||||| ||| || | |||||||||| ||||| ||||| |||||| Sbjct: 752 tgacaatggtgatccaggagactttgcgtttgtacccagctggcgcctttgtatcaaggc 811 Query: 1260 tggcccttcaggaactgaagctggggggcgtacacatacctaaaggtgtcaacatctaca 1319 ||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 812 aggcccttcaggaactgaagtttgggggtgtacatataccaaaaggtgtcaacatctaca 871 Query: 1320 tccctgtctccaccatgcaccttgaccccaagctgtggggtcctgatgccaaggagttca 1379 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||| || || |||| Sbjct: 872 tccctgtttccacaatgcaccttgatcccaacctgtggggtccagatgtgaaagaattca 931 Query: 1380 acccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatttggcgccg 1439 |||| | ||||||||| | || | ||||||||| || |||||||||||||||||||| | Sbjct: 932 acccagagcgcttctccaatgcacaaccccagctacattcctacttgccatttggcgctg 991 Query: 1440 gcgctcggacctgcctcggccaagggttcgccacggcggagctcaagatactcatatctc 1499 | ||||| || ||||| || || || || || | ||| || ||||| | || || || | Sbjct: 992 gtgctcgaacttgccttggtcagggctttgctatggctgaactcaaaaccctaatttccc 1051 Query: 1500 tcatcatctccaagtttgcgctcaggctctcgccactctatcagcattctccagcactca 1559 |||||||||||||||||| | | |||||||||| |||| ||||||||||| |||| | Sbjct: 1052 tcatcatctccaagtttgtattgaagctctcgccaaactatgagcattctccaacactga 1111 Query: 1560 aactcat 1566 ||||||| Sbjct: 1112 aactcat 1118
>gb|AC132215.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0076E06, from chromosome 3, complete sequence Length = 126323 Score = 283 bits (143), Expect = 1e-72 Identities = 296/347 (85%) Strand = Plus / Minus Query: 852 ggttctttcctacaaagaagaacaggcaggcgtgggggcttcacaaacaagtgcacagac 911 |||| ||||| | ||||| ||||| ||| ||||||| |||||||||||||||||||| || Sbjct: 102228 ggttttttcccataaagaggaacaagcaagcgtgggagcttcacaaacaagtgcacaaac 102169 Query: 912 tgatactagagatcgtcaaggaaagcggagaggacaagaatttactgcgtgccattcttc 971 | |||||||| || || |||||||||||||| || | ||| ||||| ||||| ||||||| Sbjct: 102168 taatactagaaattgtgaaggaaagcggagaagaaaggaacttactacgtgcaattcttc 102109 Query: 972 acagcgcaagcagcagcaaggtggggctgggcgaggcagagaactttatagtggacaact 1031 || ||||||||||| ||||||| ||| | ||||||||||||||||||||||| |||| Sbjct: 102108 ttagtgcaagcagcagtaaggtggagctcgctgaggcagagaactttatagtggataact 102049 Query: 1032 gcaagagcatatattttgcaggatacgagagcacagctgtaacagctgcctggtgtctaa 1091 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 102048 gcaagagtatatattttgcaggatatgagagcacagctgtcacagctgcctggtgtctaa 101989 Query: 1092 tgctccttggactgcacccagaatggcaggaccgggtccggcaagaggtcctggaggtct 1151 ||||||||||||| || ||||| |||||||| |||| ||| |||| || | |||||||| Sbjct: 101988 tgctccttggactacatccagagtggcaggatagggtacgggaagaagtgcaggaggtct 101929 Query: 1152 gcgggggccgtccgctagactcccaatcactgcagaaaatgaagaat 1198 | | |||| || ||||||| || || || ||||||||||||||| Sbjct: 101928 gtgcaggccagccagtagactctcagtcccttcagaaaatgaagaat 101882 Score = 280 bits (141), Expect = 2e-71 Identities = 207/229 (90%) Strand = Plus / Minus Query: 377 ggtccagtgttcacttactcgatggggaacgtggtgttccttcacgtgagccggccagac 436 |||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 103503 ggtccaatattcacttactccatggggaacgtcgtgttccttcacgtgagccggcctgac 103444 Query: 437 gtggtccgggacatcaacctctgcgtctcgctggacctcggcaagagctcctacctaaag 496 ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 103443 gtggttcgggacatcaacctctgcgtgtcgctggacctgggcaagagctcctacctcaag 103384 Query: 497 gccacgcacgagccgctgttcggcagaggcatcctcaaatccaacggggaggcatgggcc 556 || ||||||||||| |||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 103383 gcgacgcacgagcccctgttcggtgggggcatcctcaaatccaacggagaggcgtgggca 103324 Query: 557 caccagaggaagatcattgcgcctgagttctttctcgacaaggtcaagg 605 |||||||| ||||||||||| | ||||||||| || ||||||||||||| Sbjct: 103323 caccagagaaagatcattgcccgtgagttcttcctggacaaggtcaagg 103275 Score = 220 bits (111), Expect = 1e-53 Identities = 303/367 (82%) Strand = Plus / Minus Query: 1200 tgacgatggtgattcaggaaactctgaggctgtacccagcaggcgcgtttgtgtcaagga 1259 |||| |||||||| ||||| ||| || | |||||||||| ||||| ||||| |||||| Sbjct: 101706 tgacaatggtgatccaggagactttgcgtttgtacccagctggcgcctttgtatcaaggc 101647 Query: 1260 tggcccttcaggaactgaagctggggggcgtacacatacctaaaggtgtcaacatctaca 1319 ||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 101646 aggcccttcaggaactgaagtttgggggtgtacatataccaaaaggtgtcaacatctaca 101587 Query: 1320 tccctgtctccaccatgcaccttgaccccaagctgtggggtcctgatgccaaggagttca 1379 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||| || || |||| Sbjct: 101586 tccctgtttccacaatgcaccttgatcccaacctgtggggtccagatgtgaaagaattca 101527 Query: 1380 acccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatttggcgccg 1439 |||| | ||||||||| | || | ||||||||| || |||||||||||||||||||| | Sbjct: 101526 acccagagcgcttctccaatgcacaaccccagctacattcctacttgccatttggcgctg 101467 Query: 1440 gcgctcggacctgcctcggccaagggttcgccacggcggagctcaagatactcatatctc 1499 | ||||| || ||||| || || || || || | ||| || ||||| | || || || | Sbjct: 101466 gtgctcgaacttgccttggtcagggctttgctatggctgaactcaaaaccctaatttccc 101407 Query: 1500 tcatcatctccaagtttgcgctcaggctctcgccactctatcagcattctccagcactca 1559 |||||||||||||||||| | | |||||||||| |||| ||||||||||| |||| | Sbjct: 101406 tcatcatctccaagtttgtattgaagctctcgccaaactatgagcattctccaacactga 101347 Query: 1560 aactcat 1566 ||||||| Sbjct: 101346 aactcat 101340 Score = 153 bits (77), Expect = 3e-33 Identities = 209/253 (82%) Strand = Plus / Minus Query: 603 agggaatggtggatctgatggtagattccgcacaaacgctgctcgagccatgggaagcga 662 |||| ||||||||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 102603 agggcatggtggatctgatggtagattctgcgcaaacactgcttaagtcatgggaagaag 102544 Query: 663 gggtcgacaaaagtggcggcactgtagacatcaagattgacgacgacattcgagcctact 722 | | ||||||| |||||| || ||||||| |||||||| || ||||| | || |||| Sbjct: 102543 gaatagacaaaaatggcgggaccatagacataaagattgatgatgacataagggcttact 102484 Query: 723 ccgcagatgtcatctccaggacatgcttcggaagcagctacgtcaaaggaaagaaaatct 782 | ||||| || ||||| || |||||||| |||||||||||| ||||||||||||| || | Sbjct: 102483 ctgcagacgttatctctagaacatgctttggaagcagctacatcaaaggaaagaatatat 102424 Query: 783 tcctgaagctcagagaactgcagaaggccgtgtccaagccaaatgtgctggctgaaatga 842 | | ||| |||||||||| || ||||| ||||||||||||||||| || |||||||||| Sbjct: 102423 ttttaaagatcagagaactacaaaaggctgtgtccaagccaaatgtactagctgaaatga 102364 Query: 843 ccggcctacggtt 855 | |||||| |||| Sbjct: 102363 ctggcctaaggtt 102351 Score = 115 bits (58), Expect = 6e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 125 tgcgtgggggcgtgctccctcgcgctctacctctactacaccgtgtgggtggtgccgcag 184 |||||||||||||||| ||||||| ||||| ||| | ||||||||||| ||||| | Sbjct: 115532 tgcgtgggggcgtgctgcctcgcggcgtacctgtaccgcgtcgtgtgggtggcgccgcgg 115473 Query: 185 aggcttctcgcggggttcaggaggcagggcatcggcggcccgcgcccgtctttcccttac 244 || | ||||| | |||||||||||||||||||||||| |||||||| || ||||| ||| Sbjct: 115472 cgggtgctcgccgagttcaggaggcagggcatcggcgggccgcgcccttccttcccctac 115413 Query: 245 ggcaacatggccgacatgagggaggcggtcgccgccgc 282 |||||| | ||||||||| ||||||| ||||| ||||| Sbjct: 115412 ggcaacctcgccgacatgcgggaggccgtcgcggccgc 115375 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 315 gcatcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaaga 372 ||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 115303 gcatcgtgcacgactaccgccccgccgtgctgcccttctacgagaagtggagaaaaga 115246 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gagatggaggtgggcatggtg 100 ||||||||||||||||||||| Sbjct: 115589 gagatggaggtgggcatggtg 115569
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 283 bits (143), Expect = 1e-72 Identities = 296/347 (85%) Strand = Plus / Minus Query: 852 ggttctttcctacaaagaagaacaggcaggcgtgggggcttcacaaacaagtgcacagac 911 |||| ||||| | ||||| ||||| ||| ||||||| |||||||||||||||||||| || Sbjct: 12206382 ggttttttcccataaagaggaacaagcaagcgtgggagcttcacaaacaagtgcacaaac 12206323 Query: 912 tgatactagagatcgtcaaggaaagcggagaggacaagaatttactgcgtgccattcttc 971 | |||||||| || || |||||||||||||| || | ||| ||||| ||||| ||||||| Sbjct: 12206322 taatactagaaattgtgaaggaaagcggagaagaaaggaacttactacgtgcaattcttc 12206263 Query: 972 acagcgcaagcagcagcaaggtggggctgggcgaggcagagaactttatagtggacaact 1031 || ||||||||||| ||||||| ||| | ||||||||||||||||||||||| |||| Sbjct: 12206262 ttagtgcaagcagcagtaaggtggagctcgctgaggcagagaactttatagtggataact 12206203 Query: 1032 gcaagagcatatattttgcaggatacgagagcacagctgtaacagctgcctggtgtctaa 1091 ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 12206202 gcaagagtatatattttgcaggatatgagagcacagctgtcacagctgcctggtgtctaa 12206143 Query: 1092 tgctccttggactgcacccagaatggcaggaccgggtccggcaagaggtcctggaggtct 1151 ||||||||||||| || ||||| |||||||| |||| ||| |||| || | |||||||| Sbjct: 12206142 tgctccttggactacatccagagtggcaggatagggtacgggaagaagtgcaggaggtct 12206083 Query: 1152 gcgggggccgtccgctagactcccaatcactgcagaaaatgaagaat 1198 | | |||| || ||||||| || || || ||||||||||||||| Sbjct: 12206082 gtgcaggccagccagtagactctcagtcccttcagaaaatgaagaat 12206036 Score = 280 bits (141), Expect = 2e-71 Identities = 207/229 (90%) Strand = Plus / Minus Query: 377 ggtccagtgttcacttactcgatggggaacgtggtgttccttcacgtgagccggccagac 436 |||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 12207657 ggtccaatattcacttactccatggggaacgtcgtgttccttcacgtgagccggcctgac 12207598 Query: 437 gtggtccgggacatcaacctctgcgtctcgctggacctcggcaagagctcctacctaaag 496 ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct: 12207597 gtggttcgggacatcaacctctgcgtgtcgctggacctgggcaagagctcctacctcaag 12207538 Query: 497 gccacgcacgagccgctgttcggcagaggcatcctcaaatccaacggggaggcatgggcc 556 || ||||||||||| |||||||| | |||||||||||||||||||| ||||| ||||| Sbjct: 12207537 gcgacgcacgagcccctgttcggtgggggcatcctcaaatccaacggagaggcgtgggca 12207478 Query: 557 caccagaggaagatcattgcgcctgagttctttctcgacaaggtcaagg 605 |||||||| ||||||||||| | ||||||||| || ||||||||||||| Sbjct: 12207477 caccagagaaagatcattgcccgtgagttcttcctggacaaggtcaagg 12207429 Score = 220 bits (111), Expect = 1e-53 Identities = 303/367 (82%) Strand = Plus / Minus Query: 1200 tgacgatggtgattcaggaaactctgaggctgtacccagcaggcgcgtttgtgtcaagga 1259 |||| |||||||| ||||| ||| || | |||||||||| ||||| ||||| |||||| Sbjct: 12205860 tgacaatggtgatccaggagactttgcgtttgtacccagctggcgcctttgtatcaaggc 12205801 Query: 1260 tggcccttcaggaactgaagctggggggcgtacacatacctaaaggtgtcaacatctaca 1319 ||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 12205800 aggcccttcaggaactgaagtttgggggtgtacatataccaaaaggtgtcaacatctaca 12205741 Query: 1320 tccctgtctccaccatgcaccttgaccccaagctgtggggtcctgatgccaaggagttca 1379 ||||||| ||||| ||||||||||| ||||| ||||||||||| |||| || || |||| Sbjct: 12205740 tccctgtttccacaatgcaccttgatcccaacctgtggggtccagatgtgaaagaattca 12205681 Query: 1380 acccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatttggcgccg 1439 |||| | ||||||||| | || | ||||||||| || |||||||||||||||||||| | Sbjct: 12205680 acccagagcgcttctccaatgcacaaccccagctacattcctacttgccatttggcgctg 12205621 Query: 1440 gcgctcggacctgcctcggccaagggttcgccacggcggagctcaagatactcatatctc 1499 | ||||| || ||||| || || || || || | ||| || ||||| | || || || | Sbjct: 12205620 gtgctcgaacttgccttggtcagggctttgctatggctgaactcaaaaccctaatttccc 12205561 Query: 1500 tcatcatctccaagtttgcgctcaggctctcgccactctatcagcattctccagcactca 1559 |||||||||||||||||| | | |||||||||| |||| ||||||||||| |||| | Sbjct: 12205560 tcatcatctccaagtttgtattgaagctctcgccaaactatgagcattctccaacactga 12205501 Query: 1560 aactcat 1566 ||||||| Sbjct: 12205500 aactcat 12205494 Score = 153 bits (77), Expect = 3e-33 Identities = 209/253 (82%) Strand = Plus / Minus Query: 603 agggaatggtggatctgatggtagattccgcacaaacgctgctcgagccatgggaagcga 662 |||| ||||||||||||||||||||||| || ||||| ||||| || ||||||||| Sbjct: 12206757 agggcatggtggatctgatggtagattctgcgcaaacactgcttaagtcatgggaagaag 12206698 Query: 663 gggtcgacaaaagtggcggcactgtagacatcaagattgacgacgacattcgagcctact 722 | | ||||||| |||||| || ||||||| |||||||| || ||||| | || |||| Sbjct: 12206697 gaatagacaaaaatggcgggaccatagacataaagattgatgatgacataagggcttact 12206638 Query: 723 ccgcagatgtcatctccaggacatgcttcggaagcagctacgtcaaaggaaagaaaatct 782 | ||||| || ||||| || |||||||| |||||||||||| ||||||||||||| || | Sbjct: 12206637 ctgcagacgttatctctagaacatgctttggaagcagctacatcaaaggaaagaatatat 12206578 Query: 783 tcctgaagctcagagaactgcagaaggccgtgtccaagccaaatgtgctggctgaaatga 842 | | ||| |||||||||| || ||||| ||||||||||||||||| || |||||||||| Sbjct: 12206577 ttttaaagatcagagaactacaaaaggctgtgtccaagccaaatgtactagctgaaatga 12206518 Query: 843 ccggcctacggtt 855 | |||||| |||| Sbjct: 12206517 ctggcctaaggtt 12206505 Score = 115 bits (58), Expect = 6e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 125 tgcgtgggggcgtgctccctcgcgctctacctctactacaccgtgtgggtggtgccgcag 184 |||||||||||||||| ||||||| ||||| ||| | ||||||||||| ||||| | Sbjct: 12219686 tgcgtgggggcgtgctgcctcgcggcgtacctgtaccgcgtcgtgtgggtggcgccgcgg 12219627 Query: 185 aggcttctcgcggggttcaggaggcagggcatcggcggcccgcgcccgtctttcccttac 244 || | ||||| | |||||||||||||||||||||||| |||||||| || ||||| ||| Sbjct: 12219626 cgggtgctcgccgagttcaggaggcagggcatcggcgggccgcgcccttccttcccctac 12219567 Query: 245 ggcaacatggccgacatgagggaggcggtcgccgccgc 282 |||||| | ||||||||| ||||||| ||||| ||||| Sbjct: 12219566 ggcaacctcgccgacatgcgggaggccgtcgcggccgc 12219529 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 315 gcatcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaaga 372 ||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 12219457 gcatcgtgcacgactaccgccccgccgtgctgcccttctacgagaagtggagaaaaga 12219400 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gagatggaggtgggcatggtg 100 ||||||||||||||||||||| Sbjct: 12219743 gagatggaggtgggcatggtg 12219723
>gb|AY111832.1| Zea mays CL27480_1 mRNA sequence Length = 739 Score = 250 bits (126), Expect = 1e-62 Identities = 340/412 (82%) Strand = Plus / Minus Query: 1200 tgacgatggtgattcaggaaactctgaggctgtacccagcaggcgcgtttgtgtcaagga 1259 |||| |||||||| |||||||| ||||| ||||||||||||| || ||||| |||||| Sbjct: 633 tgacaatggtgatccaggaaaccttgaggttgtacccagcaggtgcctttgtttcaaggc 574 Query: 1260 tggcccttcaggaactgaagctggggggcgtacacatacctaaaggtgtcaacatctaca 1319 |||||| |||||||||||||| || |||||||| ||||| ||||||||||||||||||| Sbjct: 573 aggccctccaggaactgaagctcggtggcgtacatataccaaaaggtgtcaacatctaca 514 Query: 1320 tccctgtctccaccatgcaccttgaccccaagctgtggggtcctgatgccaaggagttca 1379 ||||||||||||| ||||| |||||||| |||| | | ||||||| || ||||||| Sbjct: 513 tccctgtctccacaatgcatcttgacccagagctatnngaacctgatgtgaaagagttca 454 Query: 1380 acccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatttggcgccg 1439 |||| | |||||||| || | |||||||||||| || || |||||||||||||| || | Sbjct: 453 acccagagcgcttctctgatgttcgaccccagctacattcatacttgccatttggtgctg 394 Query: 1440 gcgctcggacctgcctcggccaagggttcgccacggcggagctcaagatactcatatctc 1499 | || || |||||||| || || || || || | ||| ||||||||||| ||||| |||| Sbjct: 393 gggcccgaacctgcctagggcagggatttgctatggctgagctcaagatcctcatctctc 334 Query: 1500 tcatcatctccaagtttgcgctcaggctctcgccactctatcagcattctccagcactca 1559 ||||| | |||||||||| | | |||||| |||| ||| |||||||||||| |||| | Sbjct: 333 tcatcgtttccaagtttgttttgaagctctcaccacactaccagcattctccaacactga 274 Query: 1560 aactcatagtcgagccagagttcggcgtcgacatcaccttaaccaaagtgca 1611 ||||||| || |||||||| | || || ||| |||||||||| |||||||| Sbjct: 273 aactcattgtggagccagaacttggtgtagacctcaccttaacgaaagtgca 222 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1099 tggactgcacccagaatggcag 1120 |||||||||||||||||||||| Sbjct: 734 tggactgcacccagaatggcag 713
>ref|NM_001067187.1| Oryza sativa (japonica cultivar-group) Os07g0681300 (Os07g0681300) mRNA, complete cds Length = 1581 Score = 192 bits (97), Expect = 3e-45 Identities = 256/309 (82%) Strand = Plus / Plus Query: 316 catcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaagagca 375 |||||| ||||||||||| | ||||| || |||||||||||||| ||||||||| | | Sbjct: 210 catcgtgcacgactaccggcaggccgtcttccccttctacgagaattggagaaaacaata 269 Query: 376 tggtccagtgttcacttactcgatggggaacgtggtgttccttcacgtgagccggccaga 435 || || || ||||| || || | |||||| |||||||||| |||||||||||||| || Sbjct: 270 cggcccggtattcacgtattcagtagggaacatggtgttcctgcacgtgagccggccgga 329 Query: 436 cgtggtccgggacatcaacctctgcgtctcgctggacctcggcaagagctcctacctaaa 495 | | |||||||| | | ||| ||||| ||||||||||||||||||||||| ||| | || Sbjct: 330 catagtccgggagctgagcctgtgcgtgtcgctggacctcggcaagagctcgtacatgaa 389 Query: 496 ggccacgcacgagccgctgttcggcagaggcatcctcaaatccaacggggaggcatgggc 555 |||||||||| |||| || |||||| ||||||||||| |||||||| | || ||||| Sbjct: 390 ggccacgcaccagcctctcttcggcgagggcatcctcaagtccaacggcaacgcctgggc 449 Query: 556 ccaccagaggaagatcattgcgcctgagttctttctcgacaaggtcaagggaatggtgga 615 |||||||| ||| ||||||| || |||||||| | ||||||||||||||| ||||| || Sbjct: 450 tcaccagagaaagctcattgcccccgagttcttccccgacaaggtcaagggtatggtcga 509 Query: 616 tctgatggt 624 ||||||||| Sbjct: 510 tctgatggt 518 Score = 71.9 bits (36), Expect = 8e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 697 gattgacgacgacattcgagcctactccgcagatgtcatctccaggacatgcttcggaag 756 ||||||||| ||||| | || ||||| || ||||| |||||||||||||||||||| || Sbjct: 594 gattgacgatgacatcagggcatactctgctgatgtgatctccaggacatgcttcggtag 653 Query: 757 cagctacgtcaaaggaaagaaaatcttc 784 ||||||||| ||||| ||| | |||||| Sbjct: 654 cagctacgtgaaaggcaagcagatcttc 681 Score = 71.9 bits (36), Expect = 8e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1179 cactgcagaaaatgaagaatctgacgatggtgattcaggaaactctgaggctgtacccag 1238 |||||||||| |||||||| |||||||||||||| ||||| || ||| |||||||||| | Sbjct: 1112 cactgcagaagatgaagaacctgacgatggtgatccaggagacgctgcggctgtacccgg 1171 Query: 1239 caggcgcg 1246 | |||||| Sbjct: 1172 cgggcgcg 1179 Score = 61.9 bits (31), Expect = 7e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 1372 ggagttcaacccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatt 1431 ||||||| ||||||| || ||| ||||||| || || | ||||||| | ||| |||| || Sbjct: 1311 ggagttcgacccggcgcggttcgccgacgcccggccgccgctgcacgcgtacctgccgtt 1370 Query: 1432 tggcgccggcgctcggacctgcctcggccaagggttcgccacggcggagctcaag 1486 ||||||||||| || |||||||||||||| ||||||| ||| ||||||||| Sbjct: 1371 cggcgccggcgcgcgcacctgcctcggccagaccttcgccatggcagagctcaag 1425 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 215 atcggcggcccgcgcccgtctttcccttacggcaacatggccgacatgagg 265 ||||||||||| |||||| ||||||||||||||| | |||||||||||| Sbjct: 100 atcggcggcccaaccccgtccttcccttacggcaacctcgccgacatgagg 150
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 153 bits (77), Expect = 3e-33 Identities = 173/205 (84%) Strand = Plus / Plus Query: 401 gggaacgtggtgttccttcacgtgagccggccagacgtggtccgggacatcaacctctgc 460 |||||| |||||||||| |||||||||||||| ||| | |||||||| | | ||| ||| Sbjct: 28831245 gggaacatggtgttcctgcacgtgagccggccggacatagtccgggagctgagcctgtgc 28831304 Query: 461 gtctcgctggacctcggcaagagctcctacctaaaggccacgcacgagccgctgttcggc 520 || ||||||||||||||||||||||| ||| | |||||||||||| |||| || |||||| Sbjct: 28831305 gtgtcgctggacctcggcaagagctcgtacatgaaggccacgcaccagcctctcttcggc 28831364 Query: 521 agaggcatcctcaaatccaacggggaggcatgggcccaccagaggaagatcattgcgcct 580 ||||||||||| |||||||| | || ||||| |||||||| ||| ||||||| || Sbjct: 28831365 gagggcatcctcaagtccaacggcaacgcctgggctcaccagagaaagctcattgccccc 28831424 Query: 581 gagttctttctcgacaaggtcaagg 605 |||||||| | |||||||||||||| Sbjct: 28831425 gagttcttccccgacaaggtcaagg 28831449 Score = 71.9 bits (36), Expect = 8e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 697 gattgacgacgacattcgagcctactccgcagatgtcatctccaggacatgcttcggaag 756 ||||||||| ||||| | || ||||| || ||||| |||||||||||||||||||| || Sbjct: 28831696 gattgacgatgacatcagggcatactctgctgatgtgatctccaggacatgcttcggtag 28831755 Query: 757 cagctacgtcaaaggaaagaaaatcttc 784 ||||||||| ||||| ||| | |||||| Sbjct: 28831756 cagctacgtgaaaggcaagcagatcttc 28831783 Score = 61.9 bits (31), Expect = 7e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 1372 ggagttcaacccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatt 1431 ||||||| ||||||| || ||| ||||||| || || | ||||||| | ||| |||| || Sbjct: 28832490 ggagttcgacccggcgcggttcgccgacgcccggccgccgctgcacgcgtacctgccgtt 28832549 Query: 1432 tggcgccggcgctcggacctgcctcggccaagggttcgccacggcggagctcaag 1486 ||||||||||| || |||||||||||||| ||||||| ||| ||||||||| Sbjct: 28832550 cggcgccggcgcgcgcacctgcctcggccagaccttcgccatggcagagctcaag 28832604 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 215 atcggcggcccgcgcccgtctttcccttacggcaacatggccgacatgagg 265 ||||||||||| |||||| ||||||||||||||| | |||||||||||| Sbjct: 28828734 atcggcggcccaaccccgtccttcccttacggcaacctcgccgacatgagg 28828784 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 316 catcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaa 370 |||||| ||||||||||| | ||||| || |||||||||||||| ||||||||| Sbjct: 28828844 catcgtgcacgactaccggcaggccgtcttccccttctacgagaattggagaaaa 28828898 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 1199 ctgacgatggtgattcaggaaactctgaggctgtacccagcaggcgcg 1246 |||||||||||||| ||||| || ||| |||||||||| || |||||| Sbjct: 28832311 ctgacgatggtgatccaggagacgctgcggctgtacccggcgggcgcg 28832358
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 153 bits (77), Expect = 3e-33 Identities = 173/205 (84%) Strand = Plus / Plus Query: 401 gggaacgtggtgttccttcacgtgagccggccagacgtggtccgggacatcaacctctgc 460 |||||| |||||||||| |||||||||||||| ||| | |||||||| | | ||| ||| Sbjct: 88931 gggaacatggtgttcctgcacgtgagccggccggacatagtccgggagctgagcctgtgc 88990 Query: 461 gtctcgctggacctcggcaagagctcctacctaaaggccacgcacgagccgctgttcggc 520 || ||||||||||||||||||||||| ||| | |||||||||||| |||| || |||||| Sbjct: 88991 gtgtcgctggacctcggcaagagctcgtacatgaaggccacgcaccagcctctcttcggc 89050 Query: 521 agaggcatcctcaaatccaacggggaggcatgggcccaccagaggaagatcattgcgcct 580 ||||||||||| |||||||| | || ||||| |||||||| ||| ||||||| || Sbjct: 89051 gagggcatcctcaagtccaacggcaacgcctgggctcaccagagaaagctcattgccccc 89110 Query: 581 gagttctttctcgacaaggtcaagg 605 |||||||| | |||||||||||||| Sbjct: 89111 gagttcttccccgacaaggtcaagg 89135 Score = 71.9 bits (36), Expect = 8e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 697 gattgacgacgacattcgagcctactccgcagatgtcatctccaggacatgcttcggaag 756 ||||||||| ||||| | || ||||| || ||||| |||||||||||||||||||| || Sbjct: 89382 gattgacgatgacatcagggcatactctgctgatgtgatctccaggacatgcttcggtag 89441 Query: 757 cagctacgtcaaaggaaagaaaatcttc 784 ||||||||| ||||| ||| | |||||| Sbjct: 89442 cagctacgtgaaaggcaagcagatcttc 89469 Score = 61.9 bits (31), Expect = 7e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 1372 ggagttcaacccggcacgcttctccgacgctcgaccccagctgcactcctacttgccatt 1431 ||||||| ||||||| || ||| ||||||| || || | ||||||| | ||| |||| || Sbjct: 90176 ggagttcgacccggcgcggttcgccgacgcccggccgccgctgcacgcgtacctgccgtt 90235 Query: 1432 tggcgccggcgctcggacctgcctcggccaagggttcgccacggcggagctcaag 1486 ||||||||||| || |||||||||||||| ||||||| ||| ||||||||| Sbjct: 90236 cggcgccggcgcgcgcacctgcctcggccagaccttcgccatggcagagctcaag 90290 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 215 atcggcggcccgcgcccgtctttcccttacggcaacatggccgacatgagg 265 ||||||||||| |||||| ||||||||||||||| | |||||||||||| Sbjct: 86420 atcggcggcccaaccccgtccttcccttacggcaacctcgccgacatgagg 86470 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 316 catcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaa 370 |||||| ||||||||||| | ||||| || |||||||||||||| ||||||||| Sbjct: 86530 catcgtgcacgactaccggcaggccgtcttccccttctacgagaattggagaaaa 86584 Score = 48.1 bits (24), Expect = 0.11 Identities = 42/48 (87%) Strand = Plus / Plus Query: 1199 ctgacgatggtgattcaggaaactctgaggctgtacccagcaggcgcg 1246 |||||||||||||| ||||| || ||| |||||||||| || |||||| Sbjct: 89997 ctgacgatggtgatccaggagacgctgcggctgtacccggcgggcgcg 90044
>emb|CT835253.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN034O04, full insert sequence Length = 908 Score = 115 bits (58), Expect = 6e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 125 tgcgtgggggcgtgctccctcgcgctctacctctactacaccgtgtgggtggtgccgcag 184 |||||||||||||||| ||||||| ||||| ||| | ||||||||||| ||||| | Sbjct: 351 tgcgtgggggcgtgctgcctcgcggcgtacctgtaccgcgtcgtgtgggtggcgccgcgg 292 Query: 185 aggcttctcgcggggttcaggaggcagggcatcggcggcccgcgcccgtctttcccttac 244 || | ||||| | |||||||||||||||||||||||| |||||||| || ||||| ||| Sbjct: 291 cgggtgctcgccgagttcaggaggcagggcatcggcgggccgcgcccttccttcccctac 232 Query: 245 ggcaacatggccgacatgagggaggcggtcgccgccgc 282 |||||| | ||||||||| ||||||| ||||| ||||| Sbjct: 231 ggcaacctcgccgacatgcgggaggccgtcgcggccgc 194 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 315 gcatcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaaga 372 ||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 122 gcatcgtgcacgactaccgccccgccgtgctgcccttctacgagaagtggagaaaaga 65 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gagatggaggtgggcatggtg 100 ||||||||||||||||||||| Sbjct: 408 gagatggaggtgggcatggtg 388
>ref|NM_001056550.1| Oryza sativa (japonica cultivar-group) Os03g0332100 (Os03g0332100) mRNA, complete cds Length = 408 Score = 115 bits (58), Expect = 6e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 125 tgcgtgggggcgtgctccctcgcgctctacctctactacaccgtgtgggtggtgccgcag 184 |||||||||||||||| ||||||| ||||| ||| | ||||||||||| ||||| | Sbjct: 55 tgcgtgggggcgtgctgcctcgcggcgtacctgtaccgcgtcgtgtgggtggcgccgcgg 114 Query: 185 aggcttctcgcggggttcaggaggcagggcatcggcggcccgcgcccgtctttcccttac 244 || | ||||| | |||||||||||||||||||||||| |||||||| || ||||| ||| Sbjct: 115 cgggtgctcgccgagttcaggaggcagggcatcggcgggccgcgcccttccttcccctac 174 Query: 245 ggcaacatggccgacatgagggaggcggtcgccgccgc 282 |||||| | ||||||||| ||||||| ||||| ||||| Sbjct: 175 ggcaacctcgccgacatgcgggaggccgtcgcggccgc 212 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 315 gcatcgtccacgactaccgcccagccgtgttgcccttctacgagaaatggagaaaaga 372 ||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 284 gcatcgtgcacgactaccgccccgccgtgctgcccttctacgagaagtggagaaaaga 341
>ref|NM_122400.2| Arabidopsis thaliana CYP714A1; heme binding / iron ion binding / monooxygenase/ oxygen binding (CYP714A1) mRNA, complete cds Length = 1790 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 569 atcattgcgcctgagttctttctcgacaaggtcaagggaatggtgg 614 |||||||| |||||||| || |||||||| |||||||||||||||| Sbjct: 594 atcattgcacctgagtttttcctcgacaaagtcaagggaatggtgg 639 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1022 gtggacaactgcaagagcatatattttgc 1050 |||||||| ||||||||||| |||||||| Sbjct: 1095 gtggacaattgcaagagcatctattttgc 1123
>gb|AY058060.1| Arabidopsis thaliana AT5g24910/F6A4_120 mRNA, complete cds Length = 1790 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 569 atcattgcgcctgagttctttctcgacaaggtcaagggaatggtgg 614 |||||||| |||||||| || |||||||| |||||||||||||||| Sbjct: 594 atcattgcacctgagtttttcctcgacaaagtcaagggaatggtgg 639 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1022 gtggacaactgcaagagcatatattttgc 1050 |||||||| ||||||||||| |||||||| Sbjct: 1095 gtggacaattgcaagagcatctattttgc 1123
>gb|BT002687.1| Arabidopsis thaliana At5g24910/F6A4_120 gene, complete cds Length = 1599 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 569 atcattgcgcctgagttctttctcgacaaggtcaagggaatggtgg 614 |||||||| |||||||| || |||||||| |||||||||||||||| Sbjct: 496 atcattgcacctgagtttttcctcgacaaagtcaagggaatggtgg 541 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1022 gtggacaactgcaagagcatatattttgc 1050 |||||||| ||||||||||| |||||||| Sbjct: 997 gtggacaattgcaagagcatctattttgc 1025
>emb|BX832604.1|CNS09YYG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZH09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1722 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 569 atcattgcgcctgagttctttctcgacaaggtcaagggaatggtgg 614 |||||||| |||||||| || |||||||| |||||||||||||||| Sbjct: 552 atcattgcacctgagtttttcctcgacaaagtcaagggaatggtgg 597 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1022 gtggacaactgcaagagcatatattttgc 1050 |||||||| ||||||||||| |||||||| Sbjct: 1053 gtggacaattgcaagagcatctattttgc 1081
>gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome IV, near 60.5 cM, complete sequence Length = 99123 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 569 atcattgcgcctgagttctttctcgacaaggtcaagggaatggtgg 614 |||||||| |||||||| || |||||||| |||||||||||||||| Sbjct: 44770 atcattgcacctgagtttttcctcgacaaagtcaagggaatggtgg 44815 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1022 gtggacaactgcaagagcatatattttgc 1050 |||||||| ||||||||||| |||||||| Sbjct: 45358 gtggacaattgcaagagcatctattttgc 45386
>ref|XM_001156550.1| PREDICTED: Pan troglodytes similar to KIAA1513 protein (LOC747301), mRNA Length = 6252 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1181 ctgcagaaaatgaagaatctgacg 1204 |||||||||||||||||||||||| Sbjct: 719 ctgcagaaaatgaagaatctgacg 742
>ref|XM_001086831.1| PREDICTED: Macaca mulatta similar to pogo transposable element with KRAB domain (LOC696834), mRNA Length = 2072 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1181 ctgcagaaaatgaagaatctgacg 1204 |||||||||||||||||||||||| Sbjct: 353 ctgcagaaaatgaagaatctgacg 376
>ref|NM_017542.3| Homo sapiens pogo transposable element with KRAB domain (POGK), mRNA Length = 3852 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1181 ctgcagaaaatgaagaatctgacg 1204 |||||||||||||||||||||||| Sbjct: 473 ctgcagaaaatgaagaatctgacg 496
>dbj|AK056711.1| Homo sapiens cDNA FLJ32149 fis, clone PLACE5000159 Length = 3830 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1181 ctgcagaaaatgaagaatctgacg 1204 |||||||||||||||||||||||| Sbjct: 454 ctgcagaaaatgaagaatctgacg 477
>emb|CR860735.1| Pongo pygmaeus mRNA; cDNA DKFZp459N0227 (from clone DKFZp459N0227) Length = 3136 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1181 ctgcagaaaatgaagaatctgacg 1204 |||||||||||||||||||||||| Sbjct: 469 ctgcagaaaatgaagaatctgacg 492
>dbj|AB040946.1| Homo sapiens mRNA for KIAA1513 protein, partial cds Length = 5724 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1181 ctgcagaaaatgaagaatctgacg 1204 |||||||||||||||||||||||| Sbjct: 473 ctgcagaaaatgaagaatctgacg 496
>gb|AC185979.3| Pan troglodytes BAC clone CH251-509G2 from chromosome unknown, complete sequence Length = 217358 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tgatggacatggagatggaggtg 91 ||||||||||||||||||||||| Sbjct: 73555 tgatggacatggagatggaggtg 73577
>gb|AC153794.6| Mus musculus BAC clone RP23-128I24 from chromosome 12, complete sequence Length = 208105 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 27102 gatggaggtgggcatggtgatga 27080
>gb|AC124601.5| Mus musculus BAC clone RP23-27M3 from chromosome 12, complete sequence Length = 237876 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 171428 gatggaggtgggcatggtgatga 171406
>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence Length = 227048 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 60000 gatggaggtgggcatggtgatga 59978
>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete sequence Length = 248166 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 178870 gatggaggtgggcatggtgatga 178848
>dbj|AK125927.1| Homo sapiens cDNA FLJ43939 fis, clone TESTI4014159 Length = 4652 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 869 aagaacaggcaggcgtgggggct 891 ||||||||||||||||||||||| Sbjct: 2211 aagaacaggcaggcgtgggggct 2189
>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence Length = 201397 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 tgatggacatggagatggaggtg 91 ||||||||||||||||||||||| Sbjct: 3194 tgatggacatggagatggaggtg 3172
>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence Length = 213739 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tgatggacatggagatggaggtg 91 ||||||||||||||||||||||| Sbjct: 205224 tgatggacatggagatggaggtg 205246
>gb|AC122327.5| Mus musculus BAC clone RP23-339D20 from chromosome 12, complete sequence Length = 217167 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 141128 gatggaggtgggcatggtgatga 141106
>emb|CR293509.11| Zebrafish DNA sequence from clone DKEY-224K5 in linkage group 4, complete sequence Length = 143625 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 357 agaaatggagaaaagagcatggt 379 ||||||||||||||||||||||| Sbjct: 79970 agaaatggagaaaagagcatggt 79992
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tgatggacatggagatggaggtg 91 ||||||||||||||||||||||| Sbjct: 160360 tgatggacatggagatggaggtg 160382
>gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, complete sequence Length = 179146 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 869 aagaacaggcaggcgtgggggct 891 ||||||||||||||||||||||| Sbjct: 157891 aagaacaggcaggcgtgggggct 157913
>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence Length = 94576 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tgatggacatggagatggaggtg 91 ||||||||||||||||||||||| Sbjct: 3283 tgatggacatggagatggaggtg 3305
>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete sequence Length = 177152 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tgatggacatggagatggaggtg 91 ||||||||||||||||||||||| Sbjct: 142609 tgatggacatggagatggaggtg 142631
>emb|CT030250.3| Mouse DNA sequence from clone RP23-285E4 on chromosome 12, complete sequence Length = 177784 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 142413 gatggaggtgggcatggtgatga 142391
>gb|AC126045.3| Mus musculus BAC clone RP23-71I22 from 12, complete sequence Length = 224725 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 108967 gatggaggtgggcatggtgatga 108945
>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence Length = 199499 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 82 gatggaggtgggcatggtgatga 104 ||||||||||||||||||||||| Sbjct: 109954 gatggaggtgggcatggtgatga 109932
>gb|AC186539.2| Gallus gallus BAC clone CH261-99E11 from chromosome z, complete sequence Length = 203431 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 357 agaaatggagaaaagagcatgg 378 |||||||||||||||||||||| Sbjct: 6080 agaaatggagaaaagagcatgg 6101
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1568 gtcgagccagagttcggcgtcg 1589 |||||||||||||||||||||| Sbjct: 72086 gtcgagccagagttcggcgtcg 72107
>gb|AF116520.1|AF116519S2 Mus musculus periplakin (ppl) gene, exons 2 through 14 Length = 18583 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1256 aggatggcccttcaggaactga 1277 |||||||||||||||||||||| Sbjct: 6384 aggatggcccttcaggaactga 6405
>gb|BC072587.1| Mus musculus pogo transposable element with KRAB domain, mRNA (cDNA clone MGC:99912 IMAGE:6829796), complete cds Length = 2451 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctgac 1203 |||||||||||||||||||||| Sbjct: 432 tgcagaaaatgaagaatctgac 453
>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence Length = 233527 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1256 aggatggcccttcaggaactga 1277 |||||||||||||||||||||| Sbjct: 189146 aggatggcccttcaggaactga 189167
>gb|AC124530.4| Mus musculus BAC clone RP23-286D7 from chromosome 12, complete sequence Length = 174849 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 atggaggtgggcatggtgatga 104 |||||||||||||||||||||| Sbjct: 3205 atggaggtgggcatggtgatga 3184
>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete sequence Length = 181475 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1256 aggatggcccttcaggaactga 1277 |||||||||||||||||||||| Sbjct: 113381 aggatggcccttcaggaactga 113360
>gb|AC115118.3| Mus musculus BAC clone RP23-84N24 from 5, complete sequence Length = 198448 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1182 tgcagaaaatgaagaatctgac 1203 |||||||||||||||||||||| Sbjct: 116202 tgcagaaaatgaagaatctgac 116181
>gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosome 16, complete sequence Length = 181338 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1256 aggatggcccttcaggaactga 1277 |||||||||||||||||||||| Sbjct: 161669 aggatggcccttcaggaactga 161648
>dbj|AK031716.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030496G13 product:hypothetical CENP-B protein containing protein, full insert sequence Length = 4771 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctgac 1203 |||||||||||||||||||||| Sbjct: 765 tgcagaaaatgaagaatctgac 786
>ref|NM_175170.2| Mus musculus pogo transposable element with KRAB domain (Pogk), mRNA dbj|AK053898.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130319F13 product:KIAA1513 PROTEIN (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3372 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctgac 1203 |||||||||||||||||||||| Sbjct: 789 tgcagaaaatgaagaatctgac 810
>dbj|AK048067.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130032O11 product:hypothetical CENP-B protein containing protein, full insert sequence Length = 2437 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctgac 1203 |||||||||||||||||||||| Sbjct: 771 tgcagaaaatgaagaatctgac 792
>ref|NM_001019686.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC17G6.16c), partial mRNA Length = 2328 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1186 gaaaatgaagaatctgacgatg 1207 |||||||||||||||||||||| Sbjct: 2176 gaaaatgaagaatctgacgatg 2197
>emb|Z99162.1|SPAC17G6 S.pombe chromosome I cosmid c17G6 Length = 43880 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1186 gaaaatgaagaatctgacgatg 1207 |||||||||||||||||||||| Sbjct: 34229 gaaaatgaagaatctgacgatg 34208
>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence Length = 197870 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 atggaggtgggcatggtgatga 104 |||||||||||||||||||||| Sbjct: 176442 atggaggtgggcatggtgatga 176421
>dbj|AK122520.1| Mus musculus mRNA for mKIAA1513 protein Length = 6047 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctgac 1203 |||||||||||||||||||||| Sbjct: 750 tgcagaaaatgaagaatctgac 771
>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence Length = 178133 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 atggaggtgggcatggtgatga 104 |||||||||||||||||||||| Sbjct: 134531 atggaggtgggcatggtgatga 134510
>gb|AC122351.5| Mus musculus BAC clone RP23-388H1 from 12, complete sequence Length = 201060 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 atggaggtgggcatggtgatga 104 |||||||||||||||||||||| Sbjct: 197846 atggaggtgggcatggtgatga 197867
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 260 atgagggaggcggtcgccgcc 280 ||||||||||||||||||||| Sbjct: 1214750 atgagggaggcggtcgccgcc 1214770
>ref|XM_001120478.1| PREDICTED: Apis mellifera similar to CG32499-PA (LOC725813), mRNA Length = 1916 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 767 aaaggaaagaaaatcttcctg 787 ||||||||||||||||||||| Sbjct: 1437 aaaggaaagaaaatcttcctg 1457
>ref|XM_001071841.1| PREDICTED: Rattus norvegicus pogo transposable element with KRAB domain (predicted), transcript variant 2 (Pogk_predicted), mRNA Length = 2362 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctga 1202 ||||||||||||||||||||| Sbjct: 770 tgcagaaaatgaagaatctga 790
>ref|XM_001071803.1| PREDICTED: Rattus norvegicus pogo transposable element with KRAB domain (predicted), transcript variant 1 (Pogk_predicted), mRNA Length = 2019 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctga 1202 ||||||||||||||||||||| Sbjct: 432 tgcagaaaatgaagaatctga 452
>ref|XM_222846.4| PREDICTED: Rattus norvegicus pogo transposable element with KRAB domain (predicted) (Pogk_predicted), mRNA Length = 2007 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1182 tgcagaaaatgaagaatctga 1202 ||||||||||||||||||||| Sbjct: 432 tgcagaaaatgaagaatctga 452
>ref|NM_124888.2| Arabidopsis thaliana unknown protein (AT5G55060) mRNA, complete cds Length = 2288 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 atgcttcggaagcagctacgt 765 ||||||||||||||||||||| Sbjct: 1092 atgcttcggaagcagctacgt 1072
>gb|AY521461.1| Oryctolagus cuniculus esophagal epithelial Na channel alpha subunit mRNA, complete cds Length = 2230 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1100 ggactgcacccagaatggcag 1120 ||||||||||||||||||||| Sbjct: 1124 ggactgcacccagaatggcag 1144
>ref|XM_756573.1| Ustilago maydis 521 hypothetical protein (UM05519.1) partial mRNA Length = 8223 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1360 tcctgatgccaaggagttcaa 1380 ||||||||||||||||||||| Sbjct: 2592 tcctgatgccaaggagttcaa 2612
>dbj|AK221339.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-20-B15 Length = 2295 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 atgcttcggaagcagctacgt 765 ||||||||||||||||||||| Sbjct: 1093 atgcttcggaagcagctacgt 1073
>emb|AL590302.6| Human DNA sequence from clone RP11-252P19 on chromosome 6 Contains 2 novel genes and 3 CpG islands, complete sequence Length = 105898 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 70 gatggacatggagatggaggtgggcatgg 98 ||||||||||||||||||| |||| |||| Sbjct: 88310 gatggacatggagatggagatgggaatgg 88282
>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 ccaatcactgcagaaaatgaa 1194 ||||||||||||||||||||| Sbjct: 36726 ccaatcactgcagaaaatgaa 36706
>gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216030 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 gtgggtggtgccgcagaggct 189 ||||||||||||||||||||| Sbjct: 143098 gtgggtggtgccgcagaggct 143118
>emb|AL008639.15|HS9E21 Human DNA sequence from clone RP1-9E21 on chromosome 1q24-25 Contains the 3' end of a pseudogene similar to flavin-containing monooxygenase proteins, a calponin 2 (CNN2) pseudogene, the POGK gene for pogo transposable element with KRAB domain, the 3' end of the gene for SPT3-associated factor 42 (STAF42) and a CpG island, complete sequence Length = 106977 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1184 cagaaaatgaagaatctgacg 1204 ||||||||||||||||||||| Sbjct: 83461 cagaaaatgaagaatctgacg 83481
>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis Length = 265677 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1305 gtgtcaacatctacatccctgtctccacc 1333 |||||||||||| ||||| |||||||||| Sbjct: 196616 gtgtcaacatctgcatccgtgtctccacc 196644
>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence Length = 265677 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1305 gtgtcaacatctacatccctgtctccacc 1333 |||||||||||| ||||| |||||||||| Sbjct: 196616 gtgtcaacatctgcatccgtgtctccacc 196644
>dbj|AK175185.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-60-D20 Length = 2297 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 atgcttcggaagcagctacgt 765 ||||||||||||||||||||| Sbjct: 1097 atgcttcggaagcagctacgt 1077
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 745 atgcttcggaagcagctacgt 765 ||||||||||||||||||||| Sbjct: 3124 atgcttcggaagcagctacgt 3104
>ref|NM_208245.1| Eremothecium gossypii ABL055Cp (ABL055C), mRNA Length = 1611 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1694 atcaatgaatgcagctttcttgaga 1718 |||||||| |||||||||||||||| Sbjct: 895 atcaatgactgcagctttcttgaga 919
>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105 Length = 340000 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 ccaatcactgcagaaaatgaa 1194 ||||||||||||||||||||| Sbjct: 201876 ccaatcactgcagaaaatgaa 201856
>emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-196A3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176202 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ggacatggagatggaggtggg 93 ||||||||||||||||||||| Sbjct: 44486 ggacatggagatggaggtggg 44466
>emb|AL772354.6| Mouse DNA sequence from clone RP23-54P14 on chromosome 4, complete sequence Length = 182737 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 786 tgaagctcagagaactgcagaaggc 810 |||||||||| |||||||||||||| Sbjct: 118396 tgaagctcagtgaactgcagaaggc 118372
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1694 atcaatgaatgcagctttcttgaga 1718 |||||||| |||||||||||||||| Sbjct: 296214 atcaatgactgcagctttcttgaga 296190
>dbj|AP000282.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:S340, complete sequence Length = 65970 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 ccaatcactgcagaaaatgaa 1194 ||||||||||||||||||||| Sbjct: 20313 ccaatcactgcagaaaatgaa 20293
>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 11/21, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 ccaatcactgcagaaaatgaa 1194 ||||||||||||||||||||| Sbjct: 42702 ccaatcactgcagaaaatgaa 42682
>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 11/20 Length = 100000 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 ccaatcactgcagaaaatgaa 1194 ||||||||||||||||||||| Sbjct: 42702 ccaatcactgcagaaaatgaa 42682 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 289,751,987 Number of extensions: 15233952 Number of successful extensions: 295826 Number of sequences better than 10.0: 80 Number of HSP's gapped: 295816 Number of HSP's successfully gapped: 123 Length of query: 1764 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1741 Effective length of database: 18,503,978,556 Effective search space: 32215426665996 Effective search space used: 32215426665996 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
