ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf146k07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001071846.1| Oryza sativa (japonica cultivar-group) Os10g0550000 (Os10g0550000) mRNA, complete cds Length = 3673 Score = 414 bits (209), Expect = e-112 Identities = 455/537 (84%) Strand = Plus / Plus Query: 2756 ccctgtacttcccagataacgaatcagatcttaaggtcttttgggaggacaagagtgtca 2815 ||||||||||||||||||| ||||||| | | ||||||||||||||||| |||| || || Sbjct: 2652 ccctgtacttcccagataatgaatcaggtgtaaaggtcttttgggaggataagaatgcca 2711 Query: 2816 ggttagattatataaagttggttttggagctctcggaactatgtgcagaacagaatttgg 2875 ||||||||||||||| | |||| | |||||||| ||| |||||||||| || ||||| | Sbjct: 2712 ggttagattatataatgctggtgctagagctctcagaattatgtgcagagcaaaatttag 2771 Query: 2876 aggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaatc 2935 |||| ||||||||||||||||| ||||||||||||||| |||| ||||| |||| |||| Sbjct: 2772 aggtgtggtatctagaggatgaattaatcagcccttgcatgttcgaagaactacagaatc 2831 Query: 2936 aaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaacag 2995 |||| || | |||||||||| |||| ||| ||||||| || ||||| ||||| ||||||| Sbjct: 2832 aaggggaccgaatagatgatatgaagattttgtttgattgcatctgtgaagcactaacag 2891 Query: 2996 agatccaggagagatattttagactctcttcttggttatcgtttctcaaacacgacataa 3055 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 2892 agatccaagagagatattttagactctcttcttggttatcttttgtcaaacatgacatac 2951 Query: 3056 ggccacccccaattggagaagacctcgtcgcagaagttgacaaatatgttgatgattacc 3115 || |||| || | |||||| | ||| || |||||||||||||||||||||||| ||| | Sbjct: 2952 ggacacctccggtaggagaaaaactcatctcagaagttgacaaatatgttgatggttatc 3011 Query: 3116 tccgacatagttttccgagtacattagatcatacgatcaaaaaggatttggaagttcgga 3175 || |||||| || |||||||| || || | || |||| ||||||||| |||| | Sbjct: 3012 tcaagtgtagtttcccaagtacattggaacagataattaaaagggatttggaggttcagg 3071 Query: 3176 catggatggacattcggtcgaagactgaagggatcgttgtggagatatgggagtttgtgt 3235 |||||||||||||| | || ||||| ||||| || || |||||||||||||||||||||| Sbjct: 3072 catggatggacattagatcaaagacagaaggaattgtcgtggagatatgggagtttgtgt 3131 Query: 3236 tagacgaacttatcgatgaggctgttttcgatttgtggatttgaaactctgatcaga 3292 |||| ||| | || |||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 3132 tagatgaattgatagatgaggcggtttttgatttgtggatttgaagttctgatcaga 3188 Score = 307 bits (155), Expect = 2e-79 Identities = 460/561 (81%), Gaps = 3/561 (0%) Strand = Plus / Plus Query: 1206 tgagcaacctcaagagagcaagggagaaaagctactggatggtaatggtatttctagcag 1265 ||||||| ||| |||||||||||||||| |||||||| || ||| || ||||| ||| Sbjct: 1120 tgagcaatctccagagagcaagggagaagggctactgggtgagaatagtcgttctaacag 1179 Query: 1266 cagggcagttcagtccaaggaattcaaggatgcactggaaatactgggttcaaacaagga 1325 |||||||| ||| | ||| |||||||||||||| | ||||||||| |||||||||| || Sbjct: 1180 cagggcagctcaattcaaagaattcaaggatgcggtagaaatactgagttcaaacaatga 1239 Query: 1326 actttttctgaaggtgcttcagaagcctaactcacatatgttagacaatattagaaacca 1385 |||||| |||||| ||||||||||||| || |||||||| ||||||||||| |||| | Sbjct: 1240 acttttcctgaagctgcttcagaagccaaattcacatatattagacaatatccgaaaata 1299 Query: 1386 ccaaaacagtagattgacaaccaagttagagcccaataaaaatcttggagaaactaattt 1445 |||||| || || || |||||||||||||| || | |||| ||||||| ||| | | Sbjct: 1300 ccaaaatagcaggttaacaaccaagttagaacctgacaaaagtcttggacggtctagtat 1359 Query: 1446 tgttgaagagacaagaggctcaaatcatgacttgtctgcacaggcacaggctaaggagag 1505 | ||||||||| ||| |||||||||||||| ||| || || | ||||||| ||| |||| Sbjct: 1360 tcttgaagagaaaaggggctcaaatcatgagttggctacaaaagcacagggtaaagagac 1419 Query: 1506 caaacatatgttcttctggaggaaagacaagtcaaaaataaagcagatgctgccagaagg 1565 ||| ||| ||||||||||||| || || | |||| | | |||||| | || ||||| | Sbjct: 1420 caagcatgtgttcttctggagaaaggataggtcagatagaaagcaaaagc---cagaaag 1476 Query: 1566 aatcaacagacctcagcctgttagcaaaatagttattctgaagccaaatccaggaaaagg 1625 | ||| ||||| ||||||||||||||||||||||| || |||||||||| ||||| | | Sbjct: 1477 agccaatagaccccagcctgttagcaaaatagttatactaaagccaaatcaaggaagacg 1536 Query: 1626 aattgatcagacagtgacaagcagtgcaaggtatttacatcaggaacctagtacctctca 1685 |||||| |||||| ||| | ||| |||| |||||||||||| |||| |||| || || Sbjct: 1537 gattgatgagacagagactacaagttcaagatatttacatcagcaaccatgtacatcgca 1596 Query: 1686 aactccagagtacagtgggagggaaagttcgaaattttcaatcaaagaagtcaggaggag 1745 | ||||||| | |||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 1597 agctccagaattcagtggaagggaaagctcaaaattttcaatcaaggaagtcaggaggag 1656 Query: 1746 attcagaattgtgaccggtga 1766 ||||| ||||||||| ||||| Sbjct: 1657 attcaaaattgtgactggtga 1677 Score = 204 bits (103), Expect = 2e-48 Identities = 311/377 (82%), Gaps = 5/377 (1%) Strand = Plus / Plus Query: 808 gtcaaaaaacttatggaggatgaattggggcgtgtgaatcttttgaggacagttccaaac 867 |||||||||||||||||||| ||||||||| || |||||||||| | | |||||| | Sbjct: 719 gtcaaaaaacttatggaggacgaattggggaaagtaaatcttttgaaaaaaattccaagc 778 Query: 868 aacgaggttcagagaagattagctgatttgggaaatgatctttctcttgatggaaaatca 927 || ||| |||| ||| ||||| |||| |||||| ||||| | || || |||||| ||| Sbjct: 779 aatgagattcaaagaggattacctgacttgggatatgatgtctccctagatggaggctca 838 Query: 928 gagcatacaaataatacgacaggaa-ctttaaatcacggcaaggatatctccgtgtctca 986 |||||||||||||| || | || | | |||||||| || ||| |||| || |||| | Sbjct: 839 gagcatacaaataa-accagtggcagccttaaatcagcacacggacatcttcgcgtctta 897 Query: 987 tttatctggatcagtggattctgagagttccaagagcttgaaccacact---gaatatga 1043 |||||| ||||||||| ||||| || |||||||||||||||| || || |||||||| Sbjct: 898 tttatcgggatcagtgtattctcagggttccaagagcttgaatcattctgaagaatatga 957 Query: 1044 tcttgaatctgtcttggcaagcttcttaggtgagatttataggtgccacaatgaatgtcc 1103 |||||||||||||||||||| || |||||||| |||||||||||||| |||||| || Sbjct: 958 tcttgaatctgtcttggcaaattttttaggtgaaatttataggtgccatggtgaatgccc 1017 Query: 1104 acatgacgattgcaagagtaacagtgaattgtgtccttcactgaagtccctaatccataa 1163 |||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1018 gcatggtgattgcaagaataagggtgaattgtgtccttcactgaagtccttaatccataa 1077 Query: 1164 gaagcttaatgatttaa 1180 ||||| |||||||||| Sbjct: 1078 caagctcaatgatttaa 1094 Score = 103 bits (52), Expect = 5e-18 Identities = 243/303 (80%), Gaps = 9/303 (2%) Strand = Plus / Plus Query: 2396 ttgaaggagatggcaaaatagactggtctgaaacaatctgcaacacacaatccatcccag 2455 ||||||||| ||||||| | || || || ||||||| ||||||| ||| | |||||||| Sbjct: 2295 ttgaaggagttggcaaattggattgttccaaaacaatttgcaacatacagtgcatcccag 2354 Query: 2456 cagaactatgcagagatagcccgcggccagatatgttagaggaagcagagcaaggaaacg 2515 |||||| || || ||| ||||| |||||| || ||||| | | | || |||||| | Sbjct: 2355 cagaacaatacacagacagccccttgccagaaatattagaaggaactga---aggaaaag 2411 Query: 2516 aacctgttcaaatcttgttgagctatcctgagagcattgttgaa---ttggagcagcaag 2572 ||||||||||||| || |||||| |||||||||||| |||||| |||||||| |||| Sbjct: 2412 aacctgttcaaatgttcatgagctctcctgagagcatggttgaaaatttggagcaacaag 2471 Query: 2573 aaccaggaacacctgaacgaagagcatcaatcaaatttatctcagattgttcccctgagc 2632 | ||| ||||||||||| || | ||||| |||| ||| | |||| ||| ||||||| Sbjct: 2472 atccaaaaacacctgaaccaaaatcatcac-caaaattacc--agatggttgtcctgagc 2528 Query: 2633 taagccatgacaagcaagaacagcccagtcctatatctgttcttgattcattctatgaag 2692 |||| |||| ||| |||||||||| |||||| |||| ||||||||||||||| |||||| Sbjct: 2529 aaagcaatgagaagaaagaacagccaagtcctgtatcggttcttgattcattcgatgaag 2588 Query: 2693 atg 2695 ||| Sbjct: 2589 atg 2591 Score = 91.7 bits (46), Expect = 2e-14 Identities = 93/108 (86%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 1868 aagggagcttggcagacaaatctgcatcaaattttaagaacgacatcgccagaccttcaa 1927 ||||||||||| |||||||| ||||||||||||||||||| | || || ||||||| Sbjct: 1782 aagggagcttgccagacaaagctgcatcaaattttaagaatggaat---caaaccttcag 1838 Query: 1928 ccagcagcaagcaaaagcaacaaaatggcagcgagactgaaattagtg 1975 ||||||| ||||||||||||||||||| |||| ||| |||||| |||| Sbjct: 1839 ccagcagtaagcaaaagcaacaaaatgacagccagagtgaaatcagtg 1886 Score = 63.9 bits (32), Expect = 4e-06 Identities = 101/124 (81%) Strand = Plus / Plus Query: 2072 atccaacagcccaattctcaaaatccttggaaggaatgcttttgctccctcactgcgacg 2131 |||| ||||||||| | |||||||| |||||||||||||||| | ||||| | | ||| Sbjct: 1974 atccgacagcccaagtatcaaaatctttggaaggaatgctttctcaacctcattacaacg 2033 Query: 2132 tgtcttctcctaggagtagctctagtggaaaatgccacactgatctctcacctgaagaga 2191 |||| ||||||||||| | ||| ||||||||||||| || |||||||||||||| Sbjct: 2034 tgtcacctcctaggagtgaccataggggaaaatgccacaatgccttctcacctgaagagc 2093 Query: 2192 caga 2195 |||| Sbjct: 2094 caga 2097
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 414 bits (209), Expect = e-112 Identities = 455/537 (84%) Strand = Plus / Minus Query: 2756 ccctgtacttcccagataacgaatcagatcttaaggtcttttgggaggacaagagtgtca 2815 ||||||||||||||||||| ||||||| | | ||||||||||||||||| |||| || || Sbjct: 21204 ccctgtacttcccagataatgaatcaggtgtaaaggtcttttgggaggataagaatgcca 21145 Query: 2816 ggttagattatataaagttggttttggagctctcggaactatgtgcagaacagaatttgg 2875 ||||||||||||||| | |||| | |||||||| ||| |||||||||| || ||||| | Sbjct: 21144 ggttagattatataatgctggtgctagagctctcagaattatgtgcagagcaaaatttag 21085 Query: 2876 aggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaatc 2935 |||| ||||||||||||||||| ||||||||||||||| |||| ||||| |||| |||| Sbjct: 21084 aggtgtggtatctagaggatgaattaatcagcccttgcatgttcgaagaactacagaatc 21025 Query: 2936 aaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaacag 2995 |||| || | |||||||||| |||| ||| ||||||| || ||||| ||||| ||||||| Sbjct: 21024 aaggggaccgaatagatgatatgaagattttgtttgattgcatctgtgaagcactaacag 20965 Query: 2996 agatccaggagagatattttagactctcttcttggttatcgtttctcaaacacgacataa 3055 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 20964 agatccaagagagatattttagactctcttcttggttatcttttgtcaaacatgacatac 20905 Query: 3056 ggccacccccaattggagaagacctcgtcgcagaagttgacaaatatgttgatgattacc 3115 || |||| || | |||||| | ||| || |||||||||||||||||||||||| ||| | Sbjct: 20904 ggacacctccggtaggagaaaaactcatctcagaagttgacaaatatgttgatggttatc 20845 Query: 3116 tccgacatagttttccgagtacattagatcatacgatcaaaaaggatttggaagttcgga 3175 || |||||| || |||||||| || || | || |||| ||||||||| |||| | Sbjct: 20844 tcaagtgtagtttcccaagtacattggaacagataattaaaagggatttggaggttcagg 20785 Query: 3176 catggatggacattcggtcgaagactgaagggatcgttgtggagatatgggagtttgtgt 3235 |||||||||||||| | || ||||| ||||| || || |||||||||||||||||||||| Sbjct: 20784 catggatggacattagatcaaagacagaaggaattgtcgtggagatatgggagtttgtgt 20725 Query: 3236 tagacgaacttatcgatgaggctgttttcgatttgtggatttgaaactctgatcaga 3292 |||| ||| | || |||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 20724 tagatgaattgatagatgaggcggtttttgatttgtggatttgaagttctgatcaga 20668 Score = 307 bits (155), Expect = 2e-79 Identities = 460/561 (81%), Gaps = 3/561 (0%) Strand = Plus / Minus Query: 1206 tgagcaacctcaagagagcaagggagaaaagctactggatggtaatggtatttctagcag 1265 ||||||| ||| |||||||||||||||| |||||||| || ||| || ||||| ||| Sbjct: 23032 tgagcaatctccagagagcaagggagaagggctactgggtgagaatagtcgttctaacag 22973 Query: 1266 cagggcagttcagtccaaggaattcaaggatgcactggaaatactgggttcaaacaagga 1325 |||||||| ||| | ||| |||||||||||||| | ||||||||| |||||||||| || Sbjct: 22972 cagggcagctcaattcaaagaattcaaggatgcggtagaaatactgagttcaaacaatga 22913 Query: 1326 actttttctgaaggtgcttcagaagcctaactcacatatgttagacaatattagaaacca 1385 |||||| |||||| ||||||||||||| || |||||||| ||||||||||| |||| | Sbjct: 22912 acttttcctgaagctgcttcagaagccaaattcacatatattagacaatatccgaaaata 22853 Query: 1386 ccaaaacagtagattgacaaccaagttagagcccaataaaaatcttggagaaactaattt 1445 |||||| || || || |||||||||||||| || | |||| ||||||| ||| | | Sbjct: 22852 ccaaaatagcaggttaacaaccaagttagaacctgacaaaagtcttggacggtctagtat 22793 Query: 1446 tgttgaagagacaagaggctcaaatcatgacttgtctgcacaggcacaggctaaggagag 1505 | ||||||||| ||| |||||||||||||| ||| || || | ||||||| ||| |||| Sbjct: 22792 tcttgaagagaaaaggggctcaaatcatgagttggctacaaaagcacagggtaaagagac 22733 Query: 1506 caaacatatgttcttctggaggaaagacaagtcaaaaataaagcagatgctgccagaagg 1565 ||| ||| ||||||||||||| || || | |||| | | |||||| | || ||||| | Sbjct: 22732 caagcatgtgttcttctggagaaaggataggtcagatagaaagcaaaagc---cagaaag 22676 Query: 1566 aatcaacagacctcagcctgttagcaaaatagttattctgaagccaaatccaggaaaagg 1625 | ||| ||||| ||||||||||||||||||||||| || |||||||||| ||||| | | Sbjct: 22675 agccaatagaccccagcctgttagcaaaatagttatactaaagccaaatcaaggaagacg 22616 Query: 1626 aattgatcagacagtgacaagcagtgcaaggtatttacatcaggaacctagtacctctca 1685 |||||| |||||| ||| | ||| |||| |||||||||||| |||| |||| || || Sbjct: 22615 gattgatgagacagagactacaagttcaagatatttacatcagcaaccatgtacatcgca 22556 Query: 1686 aactccagagtacagtgggagggaaagttcgaaattttcaatcaaagaagtcaggaggag 1745 | ||||||| | |||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 22555 agctccagaattcagtggaagggaaagctcaaaattttcaatcaaggaagtcaggaggag 22496 Query: 1746 attcagaattgtgaccggtga 1766 ||||| ||||||||| ||||| Sbjct: 22495 attcaaaattgtgactggtga 22475 Score = 204 bits (103), Expect = 2e-48 Identities = 311/377 (82%), Gaps = 5/377 (1%) Strand = Plus / Minus Query: 808 gtcaaaaaacttatggaggatgaattggggcgtgtgaatcttttgaggacagttccaaac 867 |||||||||||||||||||| ||||||||| || |||||||||| | | |||||| | Sbjct: 23433 gtcaaaaaacttatggaggacgaattggggaaagtaaatcttttgaaaaaaattccaagc 23374 Query: 868 aacgaggttcagagaagattagctgatttgggaaatgatctttctcttgatggaaaatca 927 || ||| |||| ||| ||||| |||| |||||| ||||| | || || |||||| ||| Sbjct: 23373 aatgagattcaaagaggattacctgacttgggatatgatgtctccctagatggaggctca 23314 Query: 928 gagcatacaaataatacgacaggaa-ctttaaatcacggcaaggatatctccgtgtctca 986 |||||||||||||| || | || | | |||||||| || ||| |||| || |||| | Sbjct: 23313 gagcatacaaataa-accagtggcagccttaaatcagcacacggacatcttcgcgtctta 23255 Query: 987 tttatctggatcagtggattctgagagttccaagagcttgaaccacact---gaatatga 1043 |||||| ||||||||| ||||| || |||||||||||||||| || || |||||||| Sbjct: 23254 tttatcgggatcagtgtattctcagggttccaagagcttgaatcattctgaagaatatga 23195 Query: 1044 tcttgaatctgtcttggcaagcttcttaggtgagatttataggtgccacaatgaatgtcc 1103 |||||||||||||||||||| || |||||||| |||||||||||||| |||||| || Sbjct: 23194 tcttgaatctgtcttggcaaattttttaggtgaaatttataggtgccatggtgaatgccc 23135 Query: 1104 acatgacgattgcaagagtaacagtgaattgtgtccttcactgaagtccctaatccataa 1163 |||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 23134 gcatggtgattgcaagaataagggtgaattgtgtccttcactgaagtccttaatccataa 23075 Query: 1164 gaagcttaatgatttaa 1180 ||||| |||||||||| Sbjct: 23074 caagctcaatgatttaa 23058 Score = 101 bits (51), Expect = 2e-17 Identities = 159/192 (82%), Gaps = 6/192 (3%) Strand = Plus / Minus Query: 2507 aaggaaacgaacctgttcaaatcttgttgagctatcctgagagcattgttgaa---ttgg 2563 ||||||| |||||||||||||| || |||||| |||||||||||| |||||| |||| Sbjct: 21579 aaggaaaagaacctgttcaaatgttcatgagctctcctgagagcatggttgaaaatttgg 21520 Query: 2564 agcagcaagaaccaggaacacctgaacgaagagcatcaatcaaatttatctcagattgtt 2623 |||| ||||| ||| ||||||||||| || | ||||| |||| ||| | |||| ||| Sbjct: 21519 agcaacaagatccaaaaacacctgaaccaaaatcatcac-caaaattacc--agatggtt 21463 Query: 2624 cccctgagctaagccatgacaagcaagaacagcccagtcctatatctgttcttgattcat 2683 ||||||| |||| |||| ||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 21462 gtcctgagcaaagcaatgagaagaaagaacagccaagtcctgtatcggttcttgattcat 21403 Query: 2684 tctatgaagatg 2695 || ||||||||| Sbjct: 21402 tcgatgaagatg 21391 Score = 91.7 bits (46), Expect = 2e-14 Identities = 93/108 (86%), Gaps = 3/108 (2%) Strand = Plus / Minus Query: 1868 aagggagcttggcagacaaatctgcatcaaattttaagaacgacatcgccagaccttcaa 1927 ||||||||||| |||||||| ||||||||||||||||||| | ||| | ||||||| Sbjct: 22370 aagggagcttgccagacaaagctgcatcaaattttaagaatggaatc---aaaccttcag 22314 Query: 1928 ccagcagcaagcaaaagcaacaaaatggcagcgagactgaaattagtg 1975 ||||||| ||||||||||||||||||| |||| ||| |||||| |||| Sbjct: 22313 ccagcagtaagcaaaagcaacaaaatgacagccagagtgaaatcagtg 22266 Score = 63.9 bits (32), Expect = 4e-06 Identities = 101/124 (81%) Strand = Plus / Minus Query: 2072 atccaacagcccaattctcaaaatccttggaaggaatgcttttgctccctcactgcgacg 2131 |||| ||||||||| | |||||||| |||||||||||||||| | ||||| | | ||| Sbjct: 22178 atccgacagcccaagtatcaaaatctttggaaggaatgctttctcaacctcattacaacg 22119 Query: 2132 tgtcttctcctaggagtagctctagtggaaaatgccacactgatctctcacctgaagaga 2191 |||| ||||||||||| | ||| ||||||||||||| || |||||||||||||| Sbjct: 22118 tgtcacctcctaggagtgaccataggggaaaatgccacaatgccttctcacctgaagagc 22059 Query: 2192 caga 2195 |||| Sbjct: 22058 caga 22055 Score = 46.1 bits (23), Expect = 0.92 Identities = 38/43 (88%) Strand = Plus / Minus Query: 2272 agcactgcacattgtactagtgtatcagttgttgatcaggtgg 2314 |||| |||| || ||||||||||| |||||| ||||||||||| Sbjct: 21981 agcaatgcatatagtactagtgtagcagttgatgatcaggtgg 21939 Score = 44.1 bits (22), Expect = 3.7 Identities = 55/66 (83%) Strand = Plus / Minus Query: 2396 ttgaaggagatggcaaaatagactggtctgaaacaatctgcaacacacaatccatcccag 2455 ||||||||| ||||||| | || || || ||||||| ||||||| ||| | |||||||| Sbjct: 21769 ttgaaggagttggcaaattggattgttccaaaacaatttgcaacatacagtgcatcccag 21710 Query: 2456 cagaac 2461 |||||| Sbjct: 21709 cagaac 21704
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 414 bits (209), Expect = e-112 Identities = 455/537 (84%) Strand = Plus / Plus Query: 2756 ccctgtacttcccagataacgaatcagatcttaaggtcttttgggaggacaagagtgtca 2815 ||||||||||||||||||| ||||||| | | ||||||||||||||||| |||| || || Sbjct: 21043187 ccctgtacttcccagataatgaatcaggtgtaaaggtcttttgggaggataagaatgcca 21043246 Query: 2816 ggttagattatataaagttggttttggagctctcggaactatgtgcagaacagaatttgg 2875 ||||||||||||||| | |||| | |||||||| ||| |||||||||| || ||||| | Sbjct: 21043247 ggttagattatataatgctggtgctagagctctcagaattatgtgcagagcaaaatttag 21043306 Query: 2876 aggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaatc 2935 |||| ||||||||||||||||| ||||||||||||||| |||| ||||| |||| |||| Sbjct: 21043307 aggtgtggtatctagaggatgaattaatcagcccttgcatgttcgaagaactacagaatc 21043366 Query: 2936 aaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaacag 2995 |||| || | |||||||||| |||| ||| ||||||| || ||||| ||||| ||||||| Sbjct: 21043367 aaggggaccgaatagatgatatgaagattttgtttgattgcatctgtgaagcactaacag 21043426 Query: 2996 agatccaggagagatattttagactctcttcttggttatcgtttctcaaacacgacataa 3055 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 21043427 agatccaagagagatattttagactctcttcttggttatcttttgtcaaacatgacatac 21043486 Query: 3056 ggccacccccaattggagaagacctcgtcgcagaagttgacaaatatgttgatgattacc 3115 || |||| || | |||||| | ||| || |||||||||||||||||||||||| ||| | Sbjct: 21043487 ggacacctccggtaggagaaaaactcatctcagaagttgacaaatatgttgatggttatc 21043546 Query: 3116 tccgacatagttttccgagtacattagatcatacgatcaaaaaggatttggaagttcgga 3175 || |||||| || |||||||| || || | || |||| ||||||||| |||| | Sbjct: 21043547 tcaagtgtagtttcccaagtacattggaacagataattaaaagggatttggaggttcagg 21043606 Query: 3176 catggatggacattcggtcgaagactgaagggatcgttgtggagatatgggagtttgtgt 3235 |||||||||||||| | || ||||| ||||| || || |||||||||||||||||||||| Sbjct: 21043607 catggatggacattagatcaaagacagaaggaattgtcgtggagatatgggagtttgtgt 21043666 Query: 3236 tagacgaacttatcgatgaggctgttttcgatttgtggatttgaaactctgatcaga 3292 |||| ||| | || |||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 21043667 tagatgaattgatagatgaggcggtttttgatttgtggatttgaagttctgatcaga 21043723 Score = 307 bits (155), Expect = 2e-79 Identities = 460/561 (81%), Gaps = 3/561 (0%) Strand = Plus / Plus Query: 1206 tgagcaacctcaagagagcaagggagaaaagctactggatggtaatggtatttctagcag 1265 ||||||| ||| |||||||||||||||| |||||||| || ||| || ||||| ||| Sbjct: 21041359 tgagcaatctccagagagcaagggagaagggctactgggtgagaatagtcgttctaacag 21041418 Query: 1266 cagggcagttcagtccaaggaattcaaggatgcactggaaatactgggttcaaacaagga 1325 |||||||| ||| | ||| |||||||||||||| | ||||||||| |||||||||| || Sbjct: 21041419 cagggcagctcaattcaaagaattcaaggatgcggtagaaatactgagttcaaacaatga 21041478 Query: 1326 actttttctgaaggtgcttcagaagcctaactcacatatgttagacaatattagaaacca 1385 |||||| |||||| ||||||||||||| || |||||||| ||||||||||| |||| | Sbjct: 21041479 acttttcctgaagctgcttcagaagccaaattcacatatattagacaatatccgaaaata 21041538 Query: 1386 ccaaaacagtagattgacaaccaagttagagcccaataaaaatcttggagaaactaattt 1445 |||||| || || || |||||||||||||| || | |||| ||||||| ||| | | Sbjct: 21041539 ccaaaatagcaggttaacaaccaagttagaacctgacaaaagtcttggacggtctagtat 21041598 Query: 1446 tgttgaagagacaagaggctcaaatcatgacttgtctgcacaggcacaggctaaggagag 1505 | ||||||||| ||| |||||||||||||| ||| || || | ||||||| ||| |||| Sbjct: 21041599 tcttgaagagaaaaggggctcaaatcatgagttggctacaaaagcacagggtaaagagac 21041658 Query: 1506 caaacatatgttcttctggaggaaagacaagtcaaaaataaagcagatgctgccagaagg 1565 ||| ||| ||||||||||||| || || | |||| | | |||||| | || ||||| | Sbjct: 21041659 caagcatgtgttcttctggagaaaggataggtcagatagaaagcaaaagc---cagaaag 21041715 Query: 1566 aatcaacagacctcagcctgttagcaaaatagttattctgaagccaaatccaggaaaagg 1625 | ||| ||||| ||||||||||||||||||||||| || |||||||||| ||||| | | Sbjct: 21041716 agccaatagaccccagcctgttagcaaaatagttatactaaagccaaatcaaggaagacg 21041775 Query: 1626 aattgatcagacagtgacaagcagtgcaaggtatttacatcaggaacctagtacctctca 1685 |||||| |||||| ||| | ||| |||| |||||||||||| |||| |||| || || Sbjct: 21041776 gattgatgagacagagactacaagttcaagatatttacatcagcaaccatgtacatcgca 21041835 Query: 1686 aactccagagtacagtgggagggaaagttcgaaattttcaatcaaagaagtcaggaggag 1745 | ||||||| | |||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 21041836 agctccagaattcagtggaagggaaagctcaaaattttcaatcaaggaagtcaggaggag 21041895 Query: 1746 attcagaattgtgaccggtga 1766 ||||| ||||||||| ||||| Sbjct: 21041896 attcaaaattgtgactggtga 21041916 Score = 204 bits (103), Expect = 2e-48 Identities = 311/377 (82%), Gaps = 5/377 (1%) Strand = Plus / Plus Query: 808 gtcaaaaaacttatggaggatgaattggggcgtgtgaatcttttgaggacagttccaaac 867 |||||||||||||||||||| ||||||||| || |||||||||| | | |||||| | Sbjct: 21040958 gtcaaaaaacttatggaggacgaattggggaaagtaaatcttttgaaaaaaattccaagc 21041017 Query: 868 aacgaggttcagagaagattagctgatttgggaaatgatctttctcttgatggaaaatca 927 || ||| |||| ||| ||||| |||| |||||| ||||| | || || |||||| ||| Sbjct: 21041018 aatgagattcaaagaggattacctgacttgggatatgatgtctccctagatggaggctca 21041077 Query: 928 gagcatacaaataatacgacaggaa-ctttaaatcacggcaaggatatctccgtgtctca 986 |||||||||||||| || | || | | |||||||| || ||| |||| || |||| | Sbjct: 21041078 gagcatacaaataa-accagtggcagccttaaatcagcacacggacatcttcgcgtctta 21041136 Query: 987 tttatctggatcagtggattctgagagttccaagagcttgaaccacact---gaatatga 1043 |||||| ||||||||| ||||| || |||||||||||||||| || || |||||||| Sbjct: 21041137 tttatcgggatcagtgtattctcagggttccaagagcttgaatcattctgaagaatatga 21041196 Query: 1044 tcttgaatctgtcttggcaagcttcttaggtgagatttataggtgccacaatgaatgtcc 1103 |||||||||||||||||||| || |||||||| |||||||||||||| |||||| || Sbjct: 21041197 tcttgaatctgtcttggcaaattttttaggtgaaatttataggtgccatggtgaatgccc 21041256 Query: 1104 acatgacgattgcaagagtaacagtgaattgtgtccttcactgaagtccctaatccataa 1163 |||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 21041257 gcatggtgattgcaagaataagggtgaattgtgtccttcactgaagtccttaatccataa 21041316 Query: 1164 gaagcttaatgatttaa 1180 ||||| |||||||||| Sbjct: 21041317 caagctcaatgatttaa 21041333 Score = 101 bits (51), Expect = 2e-17 Identities = 159/192 (82%), Gaps = 6/192 (3%) Strand = Plus / Plus Query: 2507 aaggaaacgaacctgttcaaatcttgttgagctatcctgagagcattgttgaa---ttgg 2563 ||||||| |||||||||||||| || |||||| |||||||||||| |||||| |||| Sbjct: 21042812 aaggaaaagaacctgttcaaatgttcatgagctctcctgagagcatggttgaaaatttgg 21042871 Query: 2564 agcagcaagaaccaggaacacctgaacgaagagcatcaatcaaatttatctcagattgtt 2623 |||| ||||| ||| ||||||||||| || | ||||| |||| ||| | |||| ||| Sbjct: 21042872 agcaacaagatccaaaaacacctgaaccaaaatcatcac-caaaattacc--agatggtt 21042928 Query: 2624 cccctgagctaagccatgacaagcaagaacagcccagtcctatatctgttcttgattcat 2683 ||||||| |||| |||| ||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 21042929 gtcctgagcaaagcaatgagaagaaagaacagccaagtcctgtatcggttcttgattcat 21042988 Query: 2684 tctatgaagatg 2695 || ||||||||| Sbjct: 21042989 tcgatgaagatg 21043000 Score = 91.7 bits (46), Expect = 2e-14 Identities = 93/108 (86%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 1868 aagggagcttggcagacaaatctgcatcaaattttaagaacgacatcgccagaccttcaa 1927 ||||||||||| |||||||| ||||||||||||||||||| | || || ||||||| Sbjct: 21042021 aagggagcttgccagacaaagctgcatcaaattttaagaatggaat---caaaccttcag 21042077 Query: 1928 ccagcagcaagcaaaagcaacaaaatggcagcgagactgaaattagtg 1975 ||||||| ||||||||||||||||||| |||| ||| |||||| |||| Sbjct: 21042078 ccagcagtaagcaaaagcaacaaaatgacagccagagtgaaatcagtg 21042125 Score = 63.9 bits (32), Expect = 4e-06 Identities = 101/124 (81%) Strand = Plus / Plus Query: 2072 atccaacagcccaattctcaaaatccttggaaggaatgcttttgctccctcactgcgacg 2131 |||| ||||||||| | |||||||| |||||||||||||||| | ||||| | | ||| Sbjct: 21042213 atccgacagcccaagtatcaaaatctttggaaggaatgctttctcaacctcattacaacg 21042272 Query: 2132 tgtcttctcctaggagtagctctagtggaaaatgccacactgatctctcacctgaagaga 2191 |||| ||||||||||| | ||| ||||||||||||| || |||||||||||||| Sbjct: 21042273 tgtcacctcctaggagtgaccataggggaaaatgccacaatgccttctcacctgaagagc 21042332 Query: 2192 caga 2195 |||| Sbjct: 21042333 caga 21042336 Score = 46.1 bits (23), Expect = 0.92 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2272 agcactgcacattgtactagtgtatcagttgttgatcaggtgg 2314 |||| |||| || ||||||||||| |||||| ||||||||||| Sbjct: 21042410 agcaatgcatatagtactagtgtagcagttgatgatcaggtgg 21042452 Score = 44.1 bits (22), Expect = 3.7 Identities = 55/66 (83%) Strand = Plus / Plus Query: 2396 ttgaaggagatggcaaaatagactggtctgaaacaatctgcaacacacaatccatcccag 2455 ||||||||| ||||||| | || || || ||||||| ||||||| ||| | |||||||| Sbjct: 21042622 ttgaaggagttggcaaattggattgttccaaaacaatttgcaacatacagtgcatcccag 21042681 Query: 2456 cagaac 2461 |||||| Sbjct: 21042682 cagaac 21042687
>dbj|AK065729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035P21, full insert sequence Length = 3674 Score = 414 bits (209), Expect = e-112 Identities = 455/537 (84%) Strand = Plus / Plus Query: 2756 ccctgtacttcccagataacgaatcagatcttaaggtcttttgggaggacaagagtgtca 2815 ||||||||||||||||||| ||||||| | | ||||||||||||||||| |||| || || Sbjct: 2652 ccctgtacttcccagataatgaatcaggtgtaaaggtcttttgggaggataagaatgcca 2711 Query: 2816 ggttagattatataaagttggttttggagctctcggaactatgtgcagaacagaatttgg 2875 ||||||||||||||| | |||| | |||||||| ||| |||||||||| || ||||| | Sbjct: 2712 ggttagattatataatgctggtgctagagctctcagaattatgtgcagagcaaaatttag 2771 Query: 2876 aggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaatc 2935 |||| ||||||||||||||||| ||||||||||||||| |||| ||||| |||| |||| Sbjct: 2772 aggtgtggtatctagaggatgaattaatcagcccttgcatgttcgaagaactacagaatc 2831 Query: 2936 aaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaacag 2995 |||| || | |||||||||| |||| ||| ||||||| || ||||| ||||| ||||||| Sbjct: 2832 aaggggaccgaatagatgatatgaagattttgtttgattgcatctgtgaagcactaacag 2891 Query: 2996 agatccaggagagatattttagactctcttcttggttatcgtttctcaaacacgacataa 3055 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 2892 agatccaagagagatattttagactctcttcttggttatcttttgtcaaacatgacatac 2951 Query: 3056 ggccacccccaattggagaagacctcgtcgcagaagttgacaaatatgttgatgattacc 3115 || |||| || | |||||| | ||| || |||||||||||||||||||||||| ||| | Sbjct: 2952 ggacacctccggtaggagaaaaactcatctcagaagttgacaaatatgttgatggttatc 3011 Query: 3116 tccgacatagttttccgagtacattagatcatacgatcaaaaaggatttggaagttcgga 3175 || |||||| || |||||||| || || | || |||| ||||||||| |||| | Sbjct: 3012 tcaagtgtagtttcccaagtacattggaacagataattaaaagggatttggaggttcagg 3071 Query: 3176 catggatggacattcggtcgaagactgaagggatcgttgtggagatatgggagtttgtgt 3235 |||||||||||||| | || ||||| ||||| || || |||||||||||||||||||||| Sbjct: 3072 catggatggacattagatcaaagacagaaggaattgtcgtggagatatgggagtttgtgt 3131 Query: 3236 tagacgaacttatcgatgaggctgttttcgatttgtggatttgaaactctgatcaga 3292 |||| ||| | || |||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 3132 tagatgaattgatagatgaggcggtttttgatttgtggatttgaagttctgatcaga 3188 Score = 307 bits (155), Expect = 2e-79 Identities = 460/561 (81%), Gaps = 3/561 (0%) Strand = Plus / Plus Query: 1206 tgagcaacctcaagagagcaagggagaaaagctactggatggtaatggtatttctagcag 1265 ||||||| ||| |||||||||||||||| |||||||| || ||| || ||||| ||| Sbjct: 1120 tgagcaatctccagagagcaagggagaagggctactgggtgagaatagtcgttctaacag 1179 Query: 1266 cagggcagttcagtccaaggaattcaaggatgcactggaaatactgggttcaaacaagga 1325 |||||||| ||| | ||| |||||||||||||| | ||||||||| |||||||||| || Sbjct: 1180 cagggcagctcaattcaaagaattcaaggatgcggtagaaatactgagttcaaacaatga 1239 Query: 1326 actttttctgaaggtgcttcagaagcctaactcacatatgttagacaatattagaaacca 1385 |||||| |||||| ||||||||||||| || |||||||| ||||||||||| |||| | Sbjct: 1240 acttttcctgaagctgcttcagaagccaaattcacatatattagacaatatccgaaaata 1299 Query: 1386 ccaaaacagtagattgacaaccaagttagagcccaataaaaatcttggagaaactaattt 1445 |||||| || || || |||||||||||||| || | |||| ||||||| ||| | | Sbjct: 1300 ccaaaatagcaggttaacaaccaagttagaacctgacaaaagtcttggacggtctagtat 1359 Query: 1446 tgttgaagagacaagaggctcaaatcatgacttgtctgcacaggcacaggctaaggagag 1505 | ||||||||| ||| |||||||||||||| ||| || || | ||||||| ||| |||| Sbjct: 1360 tcttgaagagaaaaggggctcaaatcatgagttggctacaaaagcacagggtaaagagac 1419 Query: 1506 caaacatatgttcttctggaggaaagacaagtcaaaaataaagcagatgctgccagaagg 1565 ||| ||| ||||||||||||| || || | |||| | | |||||| | || ||||| | Sbjct: 1420 caagcatgtgttcttctggagaaaggataggtcagatagaaagcaaaagc---cagaaag 1476 Query: 1566 aatcaacagacctcagcctgttagcaaaatagttattctgaagccaaatccaggaaaagg 1625 | ||| ||||| ||||||||||||||||||||||| || |||||||||| ||||| | | Sbjct: 1477 agccaatagaccccagcctgttagcaaaatagttatactaaagccaaatcaaggaagacg 1536 Query: 1626 aattgatcagacagtgacaagcagtgcaaggtatttacatcaggaacctagtacctctca 1685 |||||| |||||| ||| | ||| |||| |||||||||||| |||| |||| || || Sbjct: 1537 gattgatgagacagagactacaagttcaagatatttacatcagcaaccatgtacatcgca 1596 Query: 1686 aactccagagtacagtgggagggaaagttcgaaattttcaatcaaagaagtcaggaggag 1745 | ||||||| | |||||| |||||||| || |||||||||||||| |||||||||||||| Sbjct: 1597 agctccagaattcagtggaagggaaagctcaaaattttcaatcaaggaagtcaggaggag 1656 Query: 1746 attcagaattgtgaccggtga 1766 ||||| ||||||||| ||||| Sbjct: 1657 attcaaaattgtgactggtga 1677 Score = 204 bits (103), Expect = 2e-48 Identities = 311/377 (82%), Gaps = 5/377 (1%) Strand = Plus / Plus Query: 808 gtcaaaaaacttatggaggatgaattggggcgtgtgaatcttttgaggacagttccaaac 867 |||||||||||||||||||| ||||||||| || |||||||||| | | |||||| | Sbjct: 719 gtcaaaaaacttatggaggacgaattggggaaagtaaatcttttgaaaaaaattccaagc 778 Query: 868 aacgaggttcagagaagattagctgatttgggaaatgatctttctcttgatggaaaatca 927 || ||| |||| ||| ||||| |||| |||||| ||||| | || || |||||| ||| Sbjct: 779 aatgagattcaaagaggattacctgacttgggatatgatgtctccctagatggaggctca 838 Query: 928 gagcatacaaataatacgacaggaa-ctttaaatcacggcaaggatatctccgtgtctca 986 |||||||||||||| || | || | | |||||||| || ||| |||| || |||| | Sbjct: 839 gagcatacaaataa-accagtggcagccttaaatcagcacacggacatcttcgcgtctta 897 Query: 987 tttatctggatcagtggattctgagagttccaagagcttgaaccacact---gaatatga 1043 |||||| ||||||||| ||||| || |||||||||||||||| || || |||||||| Sbjct: 898 tttatcgggatcagtgtattctcagggttccaagagcttgaatcattctgaagaatatga 957 Query: 1044 tcttgaatctgtcttggcaagcttcttaggtgagatttataggtgccacaatgaatgtcc 1103 |||||||||||||||||||| || |||||||| |||||||||||||| |||||| || Sbjct: 958 tcttgaatctgtcttggcaaattttttaggtgaaatttataggtgccatggtgaatgccc 1017 Query: 1104 acatgacgattgcaagagtaacagtgaattgtgtccttcactgaagtccctaatccataa 1163 |||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1018 gcatggtgattgcaagaataagggtgaattgtgtccttcactgaagtccttaatccataa 1077 Query: 1164 gaagcttaatgatttaa 1180 ||||| |||||||||| Sbjct: 1078 caagctcaatgatttaa 1094 Score = 103 bits (52), Expect = 5e-18 Identities = 243/303 (80%), Gaps = 9/303 (2%) Strand = Plus / Plus Query: 2396 ttgaaggagatggcaaaatagactggtctgaaacaatctgcaacacacaatccatcccag 2455 ||||||||| ||||||| | || || || ||||||| ||||||| ||| | |||||||| Sbjct: 2295 ttgaaggagttggcaaattggattgttccaaaacaatttgcaacatacagtgcatcccag 2354 Query: 2456 cagaactatgcagagatagcccgcggccagatatgttagaggaagcagagcaaggaaacg 2515 |||||| || || ||| ||||| |||||| || ||||| | | | || |||||| | Sbjct: 2355 cagaacaatacacagacagccccttgccagaaatattagaaggaactga---aggaaaag 2411 Query: 2516 aacctgttcaaatcttgttgagctatcctgagagcattgttgaa---ttggagcagcaag 2572 ||||||||||||| || |||||| |||||||||||| |||||| |||||||| |||| Sbjct: 2412 aacctgttcaaatgttcatgagctctcctgagagcatggttgaaaatttggagcaacaag 2471 Query: 2573 aaccaggaacacctgaacgaagagcatcaatcaaatttatctcagattgttcccctgagc 2632 | ||| ||||||||||| || | ||||| |||| ||| | |||| ||| ||||||| Sbjct: 2472 atccaaaaacacctgaaccaaaatcatcac-caaaattacc--agatggttgtcctgagc 2528 Query: 2633 taagccatgacaagcaagaacagcccagtcctatatctgttcttgattcattctatgaag 2692 |||| |||| ||| |||||||||| |||||| |||| ||||||||||||||| |||||| Sbjct: 2529 aaagcaatgagaagaaagaacagccaagtcctgtatcggttcttgattcattcgatgaag 2588 Query: 2693 atg 2695 ||| Sbjct: 2589 atg 2591 Score = 91.7 bits (46), Expect = 2e-14 Identities = 93/108 (86%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 1868 aagggagcttggcagacaaatctgcatcaaattttaagaacgacatcgccagaccttcaa 1927 ||||||||||| |||||||| ||||||||||||||||||| | || || ||||||| Sbjct: 1782 aagggagcttgccagacaaagctgcatcaaattttaagaatggaat---caaaccttcag 1838 Query: 1928 ccagcagcaagcaaaagcaacaaaatggcagcgagactgaaattagtg 1975 ||||||| ||||||||||||||||||| |||| ||| |||||| |||| Sbjct: 1839 ccagcagtaagcaaaagcaacaaaatgacagccagagtgaaatcagtg 1886 Score = 63.9 bits (32), Expect = 4e-06 Identities = 101/124 (81%) Strand = Plus / Plus Query: 2072 atccaacagcccaattctcaaaatccttggaaggaatgcttttgctccctcactgcgacg 2131 |||| ||||||||| | |||||||| |||||||||||||||| | ||||| | | ||| Sbjct: 1974 atccgacagcccaagtatcaaaatctttggaaggaatgctttctcaacctcattacaacg 2033 Query: 2132 tgtcttctcctaggagtagctctagtggaaaatgccacactgatctctcacctgaagaga 2191 |||| ||||||||||| | ||| ||||||||||||| || |||||||||||||| Sbjct: 2034 tgtcacctcctaggagtgaccataggggaaaatgccacaatgccttctcacctgaagagc 2093 Query: 2192 caga 2195 |||| Sbjct: 2094 caga 2097
>ref|NM_001055218.1| Oryza sativa (japonica cultivar-group) Os03g0106200 (Os03g0106200) mRNA, complete cds Length = 3538 Score = 71.9 bits (36), Expect = 2e-08 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1711 agttcgaaattttcaatcaaagaagtcaggaggagattcagaattgtgaccggtga 1766 ||||| ||||||||||| || ||||||||||||||||||| ||||||||| ||||| Sbjct: 1516 agttctaaattttcaattaaggaagtcaggaggagattcaaaattgtgactggtga 1571 Score = 61.9 bits (31), Expect = 2e-05 Identities = 135/169 (79%), Gaps = 3/169 (1%) Strand = Plus / Plus Query: 2875 gaggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaat 2934 ||||| ||||||||||| ||||| || |||||||||||| || | ||||| |||| | Sbjct: 2623 gaggtgtggtatctagaagatgaattgatcagcccttgcatgattgaagaactac---ac 2679 Query: 2935 caaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaaca 2994 ||||| |||||| ||||||||| || | | ||||| |||||||| |||||| ||||| Sbjct: 2680 caaggcaatcaaacagatgatctaaagctcccttttgattgtatctgtgaagctataaca 2739 Query: 2995 gagatccaggagagatattttagactctcttcttggttatcgtttctca 3043 |||||||||| |||||||||| | || |||| ||||| ||||||| Sbjct: 2740 ataatccaggagacatattttagaaaccctccttgcttatcttttctca 2788
>gb|AC107224.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0009C08, complete sequence Length = 137033 Score = 71.9 bits (36), Expect = 2e-08 Identities = 51/56 (91%) Strand = Plus / Minus Query: 1711 agttcgaaattttcaatcaaagaagtcaggaggagattcagaattgtgaccggtga 1766 ||||| ||||||||||| || ||||||||||||||||||| ||||||||| ||||| Sbjct: 69867 agttctaaattttcaattaaggaagtcaggaggagattcaaaattgtgactggtga 69812 Score = 61.9 bits (31), Expect = 2e-05 Identities = 135/169 (79%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 2875 gaggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaat 2934 ||||| ||||||||||| ||||| || |||||||||||| || | ||||| |||| | Sbjct: 68495 gaggtgtggtatctagaagatgaattgatcagcccttgcatgattgaagaactac---ac 68439 Query: 2935 caaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaaca 2994 ||||| |||||| ||||||||| || | | ||||| |||||||| |||||| ||||| Sbjct: 68438 caaggcaatcaaacagatgatctaaagctcccttttgattgtatctgtgaagctataaca 68379 Query: 2995 gagatccaggagagatattttagactctcttcttggttatcgtttctca 3043 |||||||||| |||||||||| | || |||| ||||| ||||||| Sbjct: 68378 ataatccaggagacatattttagaaaccctccttgcttatcttttctca 68330
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 71.9 bits (36), Expect = 2e-08 Identities = 51/56 (91%) Strand = Plus / Minus Query: 1711 agttcgaaattttcaatcaaagaagtcaggaggagattcagaattgtgaccggtga 1766 ||||| ||||||||||| || ||||||||||||||||||| ||||||||| ||||| Sbjct: 342337 agttctaaattttcaattaaggaagtcaggaggagattcaaaattgtgactggtga 342282 Score = 61.9 bits (31), Expect = 2e-05 Identities = 135/169 (79%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 2875 gaggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaat 2934 ||||| ||||||||||| ||||| || |||||||||||| || | ||||| |||| | Sbjct: 340965 gaggtgtggtatctagaagatgaattgatcagcccttgcatgattgaagaactac---ac 340909 Query: 2935 caaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaaca 2994 ||||| |||||| ||||||||| || | | ||||| |||||||| |||||| ||||| Sbjct: 340908 caaggcaatcaaacagatgatctaaagctcccttttgattgtatctgtgaagctataaca 340849 Query: 2995 gagatccaggagagatattttagactctcttcttggttatcgtttctca 3043 |||||||||| |||||||||| | || |||| ||||| ||||||| Sbjct: 340848 ataatccaggagacatattttagaaaccctccttgcttatcttttctca 340800
>dbj|AK120128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026G14, full insert sequence Length = 3541 Score = 71.9 bits (36), Expect = 2e-08 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1711 agttcgaaattttcaatcaaagaagtcaggaggagattcagaattgtgaccggtga 1766 ||||| ||||||||||| || ||||||||||||||||||| ||||||||| ||||| Sbjct: 1517 agttctaaattttcaattaaggaagtcaggaggagattcaaaattgtgactggtga 1572 Score = 61.9 bits (31), Expect = 2e-05 Identities = 135/169 (79%), Gaps = 3/169 (1%) Strand = Plus / Plus Query: 2875 gaggtatggtatctagaggatgagttaatcagcccttgcctgttggaagacctaccaaat 2934 ||||| ||||||||||| ||||| || |||||||||||| || | ||||| |||| | Sbjct: 2624 gaggtgtggtatctagaagatgaattgatcagcccttgcatgattgaagaactac---ac 2680 Query: 2935 caaggtgatcaaatagatgatctgaaaattctgtttgactgtatctgcgaagctctaaca 2994 ||||| |||||| ||||||||| || | | ||||| |||||||| |||||| ||||| Sbjct: 2681 caaggcaatcaaacagatgatctaaagctcccttttgattgtatctgtgaagctataaca 2740 Query: 2995 gagatccaggagagatattttagactctcttcttggttatcgtttctca 3043 |||||||||| |||||||||| | || |||| ||||| ||||||| Sbjct: 2741 ataatccaggagacatattttagaaaccctccttgcttatcttttctca 2789
>gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromosome ul, complete sequence Length = 218983 Score = 48.1 bits (24), Expect = 0.23 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2102 aaggaatgcttttgctccctcact 2125 |||||||||||||||||||||||| Sbjct: 151714 aaggaatgcttttgctccctcact 151691
>gb|AC128703.4| Mus musculus BAC clone RP23-356E22 from 19, complete sequence Length = 221568 Score = 48.1 bits (24), Expect = 0.23 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2311 gtggttgctcaggacaaatgtagc 2334 |||||||||||||||||||||||| Sbjct: 112208 gtggttgctcaggacaaatgtagc 112231
>emb|CR589876.7| Zebrafish DNA sequence from clone DKEY-53I3 in linkage group 23, complete sequence Length = 176042 Score = 46.1 bits (23), Expect = 0.92 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3704 taacagttaacataatatatgac 3726 ||||||||||||||||||||||| Sbjct: 139788 taacagttaacataatatatgac 139766
>gb|AE011869.1| Xanthomonas axonopodis pv. citri str. 306, section 247 of 469 of the complete genome Length = 10217 Score = 44.1 bits (22), Expect = 3.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 777 catagaaaacggccctttgcag 798 |||||||||||||||||||||| Sbjct: 6254 catagaaaacggccctttgcag 6233
>emb|AL160271.19| Human DNA sequence from clone RP11-323H21 on chromosome 9q34.1-34.3 Contains the 5' end of the GRF2 gene for guanine nucleotide releasing factor 2, the 3' end of the CRSP8 gene for subunit 8 of the cofactor required for Sp1 transcriptional activation, a novel gene, an eukaryotic translation initiation factor 4A isoform 1 (EIF4A1) pseudogene and two CpG islands, complete sequence Length = 180209 Score = 44.1 bits (22), Expect = 3.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1418 ccaataaaaatcttggagaaac 1439 |||||||||||||||||||||| Sbjct: 74999 ccaataaaaatcttggagaaac 75020
>ref|XM_309119.2| Anopheles gambiae str. PEST ENSANGP00000005327 (ENSANGG00000004101), partial mRNA Length = 1446 Score = 44.1 bits (22), Expect = 3.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2116 ctccctcactgcgacgtgtctt 2137 |||||||||||||||||||||| Sbjct: 1251 ctccctcactgcgacgtgtctt 1230 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 694,844,496 Number of extensions: 38282835 Number of successful extensions: 242906 Number of sequences better than 10.0: 14 Number of HSP's gapped: 242898 Number of HSP's successfully gapped: 70 Length of query: 3760 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 3736 Effective length of database: 18,499,340,271 Effective search space: 69113535252456 Effective search space used: 69113535252456 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
