ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf149e13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK107753:Os02g0170200 145 4e-35
2AK066705:Os04g0530300 33 0.26
3Os07g0174700:Os07g0174700 29 4.9
4AK071918:Os07g0227200 28 6.4

>AK107753:Os02g0170200 |
          Length = 162
 Score =  145 bits (366), Expect = 4e-35
 Identities = 67/74 (90%), Positives = 69/74 (93%)
 Frame = +2

Query: 332 DIKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESARDIFLKFVKQWNKGKLPSQYYEG 511
           D KEISKDDYFAKNNEFATWLKEEKGK+FSDLSSESARD+F KFVK WNKGKLPSQYYEG
Sbjct: 88  DFKEISKDDYFAKNNEFATWLKEEKGKFFSDLSSESARDLFEKFVKTWNKGKLPSQYYEG 147

Query: 512 ITTGPRSAHNWNIK 553
           IT GPRSAH WNIK
Sbjct: 148 ITRGPRSAHKWNIK 161



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>AK066705:Os04g0530300 |
          Length = 357

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +2

Query: 344 ISKDDYFAKNNEFATWLKEEKGKYFSDLSSESARDIFLKFVKQWNKGKLPSQYY 505
           I + D + K  EF  WL E K      LS+   + +F +F++  N    PS+ Y
Sbjct: 201 IREVDMWNKRPEFTAWLSEVKQVNLEALSNWEEKQMFKEFMEDHNTATFPSKKY 254



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>Os07g0174700:Os07g0174700 |
          Length = 279

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 665 KRWNKSHKHLVWQFRQETTQRKAPRLQATRKTSLLMP 555
           K  ++ HK L  Q + + T+RKAP    T KT L+ P
Sbjct: 148 KYQDEEHKSLKAQHQCQDTERKAPGQCKTAKTKLITP 184



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>AK071918:Os07g0227200 |
          Length = 223

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 405 RANISPTFLQSPPVISSSSL*NNGTRGSYLHNTMRASPLGPAQRTTGTSRR----HEKAR 572
           + NISP F +  P  S S   +N   G +  +T++ +P  P + T   + +    H+ ++
Sbjct: 53  KENISPRFDRDEPSHSDSDSNSNSNVGGFYPSTIKRAPHPPPEITKSLNSQNQFAHQTSQ 112

Query: 573 LP 578
           +P
Sbjct: 113 IP 114


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,222,947
Number of extensions: 456410
Number of successful extensions: 1278
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1278
Number of HSP's successfully gapped: 4
Length of query: 291
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 191
Effective length of database: 11,395,755
Effective search space: 2176589205
Effective search space used: 2176589205
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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