| Clone Name | FLbaf149e13 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g07420:12002.t00639:unspliced-genomic splicing factor, arginine/serine-rich 12, putative, expressed| Length = 1855 Score = 177 bits (380), Expect(3) = 5e-51 Identities = 70/77 (90%), Positives = 72/77 (93%) Frame = +2 / +3 Query: 323 LKQDIKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESARDIFLKFVKQWNKGKLPSQY 502 LKQD KEISKDDYFAKNNEFATWLKEEKGK+FSDLSSESARD+F KFVK WNKGKLPSQY Sbjct: 1392 LKQDFKEISKDDYFAKNNEFATWLKEEKGKFFSDLSSESARDLFEKFVKTWNKGKLPSQY 1571 Query: 503 YEGITTGPRSAHNWNIK 553 YEGIT GPRSAH WNIK Sbjct: 1572 YEGITRGPRSAHKWNIK 1622 Score = 40.9 bits (83), Expect(3) = 5e-51 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = +3 / +3 Query: 249 KRGIQRRGVPRRKIRASEKTRM 314 +RGIQRR +PRR+ RASE TRM Sbjct: 582 QRGIQRRSIPRRRRRASESTRM 647 Score = 29.0 bits (57), Expect(3) = 5e-51 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +1 / +1 Query: 55 GGDHDGRRRGQVEEAPLFPLL 117 GG D RRGQVEEA L L+ Sbjct: 61 GGGGDDGRRGQVEEAALVTLV 123 Score = 144 bits (310), Expect(3) = 3e-42 Identities = 64/80 (80%), Positives = 67/80 (83%) Frame = -1 / -1 Query: 561 HAFLMFQLCAERGPVVMPS*YCEGSFPLFHCFTNLRKISRADSEERSEKYLPFSSFNQVA 382 H LMF LCA+RGP V+PS*Y +GSFPLF FTN SRADSEERSEK LPFSSFNQVA Sbjct: 1630 HHTLMFHLCADRGPRVIPS*YWDGSFPLFQVFTNFSNRSRADSEERSEKNLPFSSFNQVA 1451 Query: 381 NSLFFAK*SSLDISLMSCFS 322 NSLFFAK*SSLDISL SCFS Sbjct: 1450 NSLFFAK*SSLDISLKSCFS 1391 Score = 49.2 bits (101), Expect(3) = 3e-42 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = -2 / -3 Query: 314 HPCLFACSYLSPWNASPLNP 255 HPC FACS SPWNASPLNP Sbjct: 647 HPCAFACSSPSPWNASPLNP 588 Score = 23.5 bits (45), Expect(3) = 3e-42 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -1 / -2 Query: 96 FLDLASPPPIVVAA 55 FLDL SPP + AA Sbjct: 102 FLDLPSPPIVAAAA 61 Score = 95.0 bits (201), Expect(2) = 1e-22 Identities = 46/86 (53%), Positives = 58/86 (67%) Frame = +1 / +2 Query: 325 KTGHQRNIQGRLLCKEQ*VCNLVEGREGQIFLRPFFRVRP*YLPQVCETMEQGEATFTIL 504 +TG QRNIQ L KEQ*V NLVEGR+ QIFL FF V * + +VCE +EQ +A+ IL Sbjct: 1394 ETGFQRNIQR*LFRKEQ*VRNLVEGRKRQIFL*SFFGVCS*SVREVCENLEQRKASIPIL 1573 Query: 505 *GHHHWAPLSAQLEHQEGMRRLVFLV 582 *G H W+ +S Q+EHQ M+ F + Sbjct: 1574 *GDHSWSTVSTQVEHQSVMQPEAFCI 1651 Score = 35.4 bits (71), Expect(2) = 1e-22 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +1 / +1 Query: 259 FKGEAFQGER*EQAKRQG 312 FKGEAFQGE EQAK QG Sbjct: 592 FKGEAFQGEGEEQAKAQG 645 Score = 85.8 bits (181), Expect(2) = 2e-17 Identities = 44/88 (50%), Positives = 54/88 (61%) Frame = -2 / -2 Query: 590 LQATRKTSLLMPS*CSSCALSGAQW*CPHSIVKVASPCSIVSQT*GRYHGRTLKKGRRNI 411 L +K S + *CS+C L+ * PH+I A CS SQT H +T KK +R I Sbjct: 1659 LNKIQKASGCITL*CSTCVLTVDHE*SPHNIGMEAFLCSKFSQTSRTDHEQTPKKDQRKI 1480 Query: 410 CPSLPSTRLQTHCSLQSSRPWIFL*CPV 327 C LPSTRL+THCSL++S WIFL* PV Sbjct: 1479 CLFLPSTRLRTHCSLRNSHLWIFL*NPV 1396 Score = 27.2 bits (53), Expect(2) = 2e-17 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3 / -1 Query: 313 ILVFSLALIFLLGTPLL*I 257 ILV SLAL+ LLG LL*I Sbjct: 646 ILVLSLALLLLLGMLLL*I 590 Score = 87.7 bits (185), Expect = 1e-16 Identities = 44/77 (57%), Positives = 53/77 (68%) Frame = +3 / +1 Query: 324 *NRTSKKYPRTTTLQRTMSLQPG*RKRRANISPTFLQSPPVISSSSL*NNGTRGSYLHNT 503 *NR SKKYP+ T QRTMS QPG*RK++AN S FL+S VI S SL* GT+ S+ N Sbjct: 1393 *NRISKKYPKMTISQRTMSSQPG*RKKKANFSLIFLRSLLVICSRSL*KLGTKESFHPNI 1572 Query: 504 MRASPLGPAQRTTGTSR 554 MR S + Q T+GTS+ Sbjct: 1573 MRGSLVVHGQHTSGTSK 1623 Score = 57.9 bits (120), Expect = 1e-07 Identities = 30/75 (40%), Positives = 35/75 (46%) Frame = -3 / -3 Query: 550 DVPVVR*AGPSGDAXXXXXXXXXXXXLFHKLEEDITGGL*RKVGEIFALLFLQPGXXXXX 371 DVP+V * + D FHKL E IT L RK+ E FA FLQPG Sbjct: 1619 DVPLVC*PWTTSDPLIILGWKLSFVPSFHKLLEQITSRLRRKIREKFAFFFLQPGCELIV 1440 Query: 370 XXXXXXLGYFFDVLF 326 GYFF++LF Sbjct: 1439 LCEIVIFGYFFEILF 1395
>LOC_Os06g39090:12006.t03607:unspliced-genomic FAR1 family protein| Length = 9791 Score = 170 bits (365), Expect = 2e-41 Identities = 68/80 (85%), Positives = 72/80 (90%) Frame = +2 / +1 Query: 323 LKQDIKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESARDIFLKFVKQWNKGKLPSQY 502 LKQD KEISKD+YFAKNNEFATW KEEKGK+FSDLS ESARD+F KFVK WNKGKLPSQY Sbjct: 3628 LKQDFKEISKDEYFAKNNEFATWSKEEKGKFFSDLSLESARDLFEKFVKTWNKGKLPSQY 3807 Query: 503 YEGITTGPRSAHNWNIKKA* 562 YEGIT GPRSAH WNIK +* Sbjct: 3808 YEGITRGPRSAHRWNIKAS* 3867 Score = 133 bits (286), Expect = 1e-30 Identities = 59/77 (76%), Positives = 64/77 (83%) Frame = -1 / -1 Query: 552 LMFQLCAERGPVVMPS*YCEGSFPLFHCFTNLRKISRADSEERSEKYLPFSSFNQVANSL 373 LMF LCA+RGP V+PS*Y +GSFPLF FTN SRADS+ERSEK LPFSSF+QVANSL Sbjct: 3857 LMFHLCADRGPRVIPS*YWDGSFPLFQVFTNFSNRSRADSKERSEKNLPFSSFDQVANSL 3678 Query: 372 FFAK*SSLDISLMSCFS 322 FFAK SSLDISL SC S Sbjct: 3677 FFAKYSSLDISLKSCLS 3627 Score = 94.5 bits (200), Expect = 9e-19 Identities = 44/85 (51%), Positives = 57/85 (67%) Frame = +1 / +3 Query: 328 TGHQRNIQGRLLCKEQ*VCNLVEGREGQIFLRPFFRVRP*YLPQVCETMEQGEATFTIL* 507 TG QRNIQ + CKEQ V NLVEGR+ QIFL FF V * + +VCE +EQ +A+ IL* Sbjct: 3633 TGFQRNIQR*IFCKEQRVRNLVEGRKRQIFL*SFFGVCS*SV*EVCENLEQRKASIPIL* 3812 Query: 508 GHHHWAPLSAQLEHQEGMRRLVFLV 582 G H W+ +S Q+EHQ ++ F + Sbjct: 3813 GDHSWSTVSTQVEHQSVIKPEAFCI 3887 Score = 83.5 bits (176), Expect = 2e-15 Identities = 42/79 (53%), Positives = 50/79 (63%) Frame = +3 / +2 Query: 327 NRTSKKYPRTTTLQRTMSLQPG*RKRRANISPTFLQSPPVISSSSL*NNGTRGSYLHNTM 506 NR SKKYP+ LQRT S QPG RK++AN S FL S VI SL* GT+ S+ N M Sbjct: 3632 NRISKKYPKMNILQRTTSSQPGRRKKKANFSLIFLWSLLVICLRSL*KLGTKESFHPNIM 3811 Query: 507 RASPLGPAQRTTGTSRRHE 563 R S + Q T GTS+RH+ Sbjct: 3812 RGSLVVHGQHTGGTSKRHK 3868 Score = 83.5 bits (176), Expect = 2e-15 Identities = 44/88 (50%), Positives = 52/88 (59%) Frame = -2 / -2 Query: 590 LQATRKTSLLMPS*CSSCALSGAQW*CPHSIVKVASPCSIVSQT*GRYHGRTLKKGRRNI 411 L +K S M *CS+C L+ * PH+I A CS SQT H +T KK +R I Sbjct: 3895 LNKIQKASGFMTL*CSTCVLTVDHE*SPHNIGMEAFLCSKFSQTSQTDHEQTPKKDQRKI 3716 Query: 410 CPSLPSTRLQTHCSLQSSRPWIFL*CPV 327 C LPSTRL+T CSLQ+ WIFL* PV Sbjct: 3715 CLFLPSTRLRTRCSLQNIHLWIFL*NPV 3632 Score = 52.8 bits (109), Expect = 3e-06 Identities = 28/75 (37%), Positives = 34/75 (45%) Frame = -3 / -3 Query: 550 DVPVVR*AGPSGDAXXXXXXXXXXXXLFHKLEEDITGGL*RKVGEIFALLFLQPGXXXXX 371 DVP V * + D FHKL + IT L RK+ E FA FL+PG Sbjct: 3855 DVPPVC*PWTTSDPLIILGWKLSFVPSFHKLLKQITSRLQRKIREKFAFFFLRPGCELVV 3676 Query: 370 XXXXXXLGYFFDVLF 326 GYFF++LF Sbjct: 3675 LCKIFIFGYFFEILF 3631
>LOC_Os04g02300:12004.t00124:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3606 Score = 38.2 bits (77), Expect = 0.082 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +3 / +2 Query: 402 RRANISPTFLQSPPVISSSSL*NNGTRGSYLHNTMRASPLGPAQRTTGTSRRHEKARLP 578 RR+ + T++ SP V SS * +LH+ + SPL T T+R H + R P Sbjct: 1763 RRSYLPSTYILSPAVPSSLKS*LTSWPNGHLHSPLNPSPLNSLG*CTLTARGHTRGRAP 1939
>LOC_Os03g51030:12003.t04434:unspliced-genomic phytochrome A, putative, expressed| Length = 7954 Score = 35.9 bits (72), Expect = 0.40 Identities = 17/58 (29%), Positives = 25/58 (43%) Frame = -1 / -3 Query: 687 YRLRSETKKMEQVAQAFGMAVSSRNHTTQGTQAAGHKEDEPSHAFLMFQLCAERGPVV 514 YR E Q +A ++ NHT++ Q G + D P + QLC+ G V Sbjct: 353 YRAAQPVPLQETNKQQMMLAKAASNHTSEEQQRWGKRRDRPGYLLGSAQLCSSSGGAV 180
>LOC_Os03g59940:12003.t05238:unspliced-genomic hypothetical protein| Length = 510 Score = 29.5 bits (58), Expect(2) = 0.70 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 / -2 Query: 429 LQSPPVISSSSL*NNGTRGSYLHNTMRASPLGPAQRTTGTSRRHEKARLPCGLQPG 596 L P SSSS *+ + T R + P + + S RH AR P ++PG Sbjct: 311 LHRPASPSSSSR*STRPTTTPPRPTRRRASPRPTRPSRSASCRHHPARTPARIRPG 144 Score = 24.9 bits (48), Expect(2) = 0.70 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 / -1 Query: 10 FCSFPSLGDRAEETAGGD 63 F FPSLG R + GGD Sbjct: 375 FVLFPSLGRRPPQPHGGD 322
>LOC_Os05g36994:12005.t004742:unspliced-genomic expressed protein| Length = 2536 Score = 35.0 bits (70), Expect = 0.75 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 / +3 Query: 348 PRTTTLQRTMSLQPG*RKRRANISPTFLQSPPVISSSSL*NNGTRGSYLH 497 PR +R + PG R+R A SPT P+ + S++ + +RG +LH Sbjct: 66 PRFPRPRRRTAHHPGPRRRAAPSSPTSPHHAPIQAESAVGTSPSRGPHLH 215
>LOC_Os03g20970:12003.t01853:unspliced-genomic phospholipid-transporting ATPase 1, putative, expressed| Length = 5082 Score = 27.6 bits (54), Expect(2) = 0.79 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +3 / -2 Query: 477 TRGSYLHNTMRASPLGPAQRTTGTSRRHEKARLPCGLQPGC 599 TR + + R P+ A R G+SRR + PC C Sbjct: 581 TRTASWASARRRQPVAAATRRAGSSRRMTRWTRPCRSPTSC 459 Score = 24.4 bits (47), Expect(2) = 0.79 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +2 / -2 Query: 584 PAAWVPCVVWFLDETAIPNAC 646 PAAW W L A+P AC Sbjct: 365 PAAWPARRPWPLHPIAVPVAC 303
>LOC_Os02g12880:12002.t01085:unspliced-genomic calcium ion binding protein, putative, expressed| Length = 3779 Score = 34.1 bits (68), Expect = 1.4 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 / +1 Query: 261 QRRGVPRRKIRASEKTRMFHR*NRTSKKYPRTTTLQRTMSLQP 389 +RRG R +R + R HR R ++ PR QR ++QP Sbjct: 295 RRRGAARAGVRGGARPRGLHRRRRRLRRRPRRGLHQRRRAVQP 423
>LOC_Os01g63930:12001.t05761:unspliced-genomic cytochrome P450 94A2, putative, expressed| Length = 3781 Score = 31.3 bits (62), Expect(2) = 1.8 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -2 / -3 Query: 443 GRTLKKGRRNICPSLPSTRLQTHCS 369 GRT ++G R + P+ PS R +T CS Sbjct: 380 GRTSRRGCRTLPPTTPSGRPRTRCS 306 Score = 24.4 bits (47), Expect(2) = 1.8 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = -2 / -1 Query: 545 SSCALSGAQW*CPHSIVKVASPCSIVSQT*GRYHGRTLKKGRR 417 SSC S ++W H ++ A P SQ R R + RR Sbjct: 3739 SSCNSSRSKWGLTHDLIDKAHPTFRQSQQLRRRRRRHWMRRRR 3611
>LOC_Os10g33484:12010.t02649:unspliced-genomic hypothetical protein| Length = 2063 Score = 33.6 bits (67), Expect = 2.0 Identities = 27/94 (28%), Positives = 38/94 (40%) Frame = +3 / +2 Query: 576 PCGLQPGCLALCGFLTKLPYQMLVRLVPSFWFLI*VYMNNSLVSSCLELMLVLLVTFSEK 755 P L P L L +P + P+ F ++++ L SS L+L + TF Sbjct: 434 PSLLSPSRPPLLSLLPPIPLLPISHPPPNLNFSSFIFLSLLLSSSSRFLILPPISTFLLY 613 Query: 756 VLENLLLYGKELVFR*LAPPPHVHVLLTFYDGFF 857 +LLL F L PP +LL F FF Sbjct: 614 FFLSLLLLSSSSRFLILLPPISTFILLFFSPSFF 715
>LOC_Os02g10520:12002.t00900:unspliced-genomic subtilisin-like protease precursor, putative, expressed| Length = 6999 Score = 33.1 bits (66), Expect = 2.7 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 / -1 Query: 568 LVFLVACSLGALRCVVS*RNCHTKCLCDLFHLFG 669 L F A +GA RNCH + +C L+ LFG Sbjct: 747 LAFFQAAPVGAPPTPARPRNCHERVVCSLWPLFG 646
>LOC_Os07g08770:12007.t00752:unspliced-genomic YGGT family protein, expressed| Length = 4634 Score = 32.7 bits (65), Expect = 3.7 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 471 NGTRGSYLHNTMRASPLGPAQRTTGTSRRHEKARLPC 581 +G R R + LG A+R G RRH + R PC Sbjct: 217 SGRRARVWGGRRRVAGLGKARRRRGGGRRHGEVRTPC 107
>LOC_Os04g48760:12004.t04392:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed| Length = 4451 Score = 32.7 bits (65), Expect = 3.7 Identities = 19/81 (23%), Positives = 34/81 (41%) Frame = +2 / -1 Query: 416 FSDLSSESARDIFLKFVKQWNKGKLPSQYYEGITTGPRSAHNWNIKKA*EGSSSLWPAAW 595 F + + S+ + K W + +LP +Y P A + +K SS W A Sbjct: 1553 FPGVDNASSHERLPKLAGIWPENELPPRYTSLSRRRPPRAAGTSPEKRLSSRSSTWSAPH 1374 Query: 596 VPCVVWFLDETAIPNACATCS 658 +P + A+P + ++CS Sbjct: 1373 LPISAGTVPVKALPPSRSSCS 1311
>LOC_Os03g53280:12003.t04650:unspliced-genomic beige/BEACH domain containing protein, expressed| Length = 17474 Score = 32.7 bits (65), Expect = 3.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +3 / +3 Query: 663 FWFLI*VYMNNSLVSSCLELMLVLLVTFSEKVLENLL 773 FWF + V + LE++ VLLVT K++ENL+ Sbjct: 705 FWFCYAFALEAKFV*ALLEMVGVLLVTVDAKLVENLM 815
>LOC_Os02g19540:12002.t01747:unspliced-genomic F-box domain containing protein| Length = 1873 Score = 32.7 bits (65), Expect = 3.7 Identities = 18/40 (45%), Positives = 20/40 (50%) Frame = +3 / +2 Query: 264 RRGVPRRKIRASEKTRMFHR*NRTSKKYPRTTTLQRTMSL 383 RRG R SEK R R R +KK P T+ RT SL Sbjct: 23 RRGGGGRDHLRSEKRRSIRRRRRRTKKAPTTSATSRTPSL 142
>LOC_Os01g70550:12001.t06354:unspliced-genomic expressed protein| Length = 3495 Score = 32.7 bits (65), Expect = 3.7 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 / +1 Query: 785 RAGIQVISPTTTCPCSSDLL*WVF 856 R G SPT++CP SS L W+F Sbjct: 589 RRGTDATSPTSSCPSSSSSLAWLF 660
>LOC_Os03g47810:12003.t04143:unspliced-genomic nitrate and chloride transporter, putative, expressed| Length = 3463 Score = 32.7 bits (65), Expect = 3.7 Identities = 12/16 (75%), Positives = 14/16 (87%) Frame = +1 / -2 Query: 52 AGGDHDGRRRGQVEEA 99 AGG+HDGRRR V+EA Sbjct: 297 AGGEHDGRRRDLVDEA 250
>LOC_Os03g16450:12003.t01428:unspliced-genomic pentatricopeptide repeat protein PPR868-14, putative, expressed| Length = 2497 Score = 30.9 bits (61), Expect(2) = 4.0 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 / +3 Query: 549 SRRHEKARLPCGLQPGCLALCGFLTKLPYQMLVRLVPS 662 SRRHE+ R+P G +A T+L + R VPS Sbjct: 636 SRRHERRRVPAGRGHMDIARLRLCTELSVRQSTRTVPS 749 Score = 23.1 bits (44), Expect(2) = 4.0 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 / +2 Query: 2 GACSVPSLRSETEPRRRPAATT 67 G C PS + T P PAA++ Sbjct: 263 GPCPRPSAPARTSPTSPPAASS 328
>LOC_Os10g42410:12010.t03466:unspliced-genomic expressed protein| Length = 2487 Score = 27.2 bits (53), Expect(2) = 4.9 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 / +3 Query: 619 KKPHNARHPGCRPQGRRAF 563 ++P R P CRP RAF Sbjct: 1641 RRPPRRRRPPCRPSAARAF 1697 Score = 22.1 bits (42), Expect(2) = 4.9 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = -2 / +1 Query: 668 PKRWNKSHKHLVWQFRQETTQR 603 P+R + H+H + +ETT R Sbjct: 1513 PRRHRRRHRHRHRRQEEETTPR 1578
>LOC_Os03g62270:12003.t05454:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed| Length = 3545 Score = 32.2 bits (64), Expect = 5.1 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +3 / +1 Query: 507 RASPLGPAQRTTGTSRRHEKARLPCGLQPGCLALCGFLTKLP 632 R++P A RTT +SR A C P C + C T P Sbjct: 367 RSAPRRSAPRTTTSSRSRSSAPSCCSPSPRCPSRCSGFTSAP 492
>LOC_Os03g55470:12003.t04811:unspliced-genomic expressed protein| Length = 4418 Score = 32.2 bits (64), Expect = 5.1 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 / -1 Query: 22 PSLGDRAEETAGGDHDGRRRGQV 90 P G R AGGDH GR RG + Sbjct: 197 PGRGRRGRRCAGGDHGGRSRGNL 129
>LOC_Os07g07820:12007.t00660:unspliced-genomic expressed protein| Length = 6324 Score = 31.8 bits (63), Expect = 7.0 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -2 / +2 Query: 665 KRWNKSHKHLVWQFRQETTQRKAPRLQATRKTSLLMP 555 K ++ HK L Q + + T+RKAP T KT L+ P Sbjct: 5516 KYQDEEHKSLKAQHQCQDTERKAPGQCKTAKTKLITP 5626
>LOC_Os06g02780:12006.t00171:unspliced-genomic aspartic proteinase nepenthesin-2 precursor, putative, expressed| Length = 3105 Score = 31.8 bits (63), Expect = 7.0 Identities = 23/75 (30%), Positives = 29/75 (38%) Frame = +3 / +1 Query: 354 TTTLQRTMSLQPG*RKRRANISPTFLQSPPVISSSSL*NNGTRGSYLHNTMRASPLGPAQ 533 T T T S P R+RRA SPT SPP S + + + A+P G Sbjct: 1993 TITSASTASGTPTARRRRAPTSPTC*PSPPPPQSGASSSAAATACRAASASAAAPPGSWH 2172 Query: 534 RTTGTSRRHEKARLP 578 G S + R P Sbjct: 2173 SAAGRSHWCRRRRRP 2217
>LOC_Os03g18030:12003.t01577:unspliced-genomic leucoanthocyanidin dioxygenase, putative, expressed| Length = 5590 Score = 31.8 bits (63), Expect = 7.0 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +1 / +1 Query: 46 ETAGGDHDGRRRGQVEEAPLFPLL 117 E AGG GRRRG+V E L P L Sbjct: 979 EAAGGVRRGRRRGRVLEGQLLPAL 1050
>LOC_Os03g62860:12003.t05513:unspliced-genomic glucan endo-1,3-beta-glucosidase A6 precursor, putative, expressed| Length = 2477 Score = 27.6 bits (54), Expect(2) = 7.2 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -2 / -2 Query: 482 PCSIVSQT*GRYHGRTLKKGRRNICPSLPS 393 PCS S R GRT + RR PS PS Sbjct: 1273 PCSAGSTRRRRARGRTARPRRRTPPPSAPS 1184 Score = 25.4 bits (49), Expect(2) = 7.2 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 / -2 Query: 854 KPIIKGQKNMDMWWW 810 KP+ G K+M+ WW Sbjct: 2161 KPVYTGVKHMEYLWW 2117
>LOC_Os02g49332:12002.t05466:unspliced-genomic CSLE2 - cellulose synthase-like family E, expressed| Length = 5286 Score = 29.0 bits (57), Expect(2) = 7.8 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 / +2 Query: 81 SPPPIVVAAGRLLGSVSERREGTE 10 SPPP ++AAG G + RR G E Sbjct: 2369 SPPPSLLAAGFAAGELRRRRGGGE 2440 Score = 24.9 bits (48), Expect(2) = 7.8 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -3 / +1 Query: 619 KKPHNARHPGCR 584 K P +RHPGCR Sbjct: 1207 KPPRWSRHPGCR 1242
>LOC_Os12g34560:12012.t03144:unspliced-genomic hypothetical protein| Length = 395 Score = 31.3 bits (62), Expect = 9.6 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +2 / -2 Query: 428 SSESARDIFLKFVKQWNKGKLPSQYYEGITTGPRSA 535 SS+ DI ++ V+ W+ G PS+++ T+ +S+ Sbjct: 355 SSDDELDIAMEVVRDWSSGASPSEFFSRSTSFKKSS 248
>LOC_Os11g05180:12011.t00411:unspliced-genomic expressed protein| Length = 2897 Score = 31.3 bits (62), Expect = 9.6 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -3 / -1 Query: 835 RRTWTCGGGANHLNTSSFPYSNKFSRTFSLNVTSKTNINSKHDDTKLL 692 RRTW SF N+ S+N +KTN KHD T L Sbjct: 2804 RRTWPISKSKEKERAQSFS*KNRTLAHQSINTNNKTNGA*KHDYTACL 2661
>LOC_Os09g32560:12009.t02870:unspliced-genomic conserved hypothetical protein| Length = 1232 Score = 31.3 bits (62), Expect = 9.6 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 / -3 Query: 11 SVPSLRSETEPRRRPAATTMGG 76 + PS S T PRRRPAA GG Sbjct: 387 AAPSSSSSTSPRRRPAARRGGG 322
>LOC_Os06g49100:12006.t04594:unspliced-genomic LRX2, putative, expressed| Length = 1833 Score = 31.3 bits (62), Expect = 9.6 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -2 / -1 Query: 674 QKPKRWNKSHKHLVWQFRQETTQRKAPRLQATRK 573 ++ +R S +H+VWQ R +QR+A A+R+ Sbjct: 1200 RRRRRRRPSRRHVVWQRRSMRSQRRAATWAASRR 1099
>LOC_Os05g50460:12005.t04478:unspliced-genomic pentatricopeptide repeat protein PPR986-12, putative| Length = 1905 Score = 31.3 bits (62), Expect = 9.6 Identities = 13/40 (32%), Positives = 17/40 (42%) Frame = -2 / -1 Query: 377 HCSLQSSRPWIFL*CPVLAMKHPCLFACSYLSPWNASPLN 258 HC + S PW L CP+ + LF+ P P N Sbjct: 1626 HCHMCSCAPWFCLHCPLCSFLSSFLFSSGCTRPKQRCPNN 1507
>LOC_Os03g04570:12003.t00334:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 4754 Score = 31.3 bits (62), Expect = 9.6 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +3 / -2 Query: 507 RASPLGPAQRTTGTSRRHEKARLPCGLQPGCLALCG 614 RA+P P R TSRR + PCG A CG Sbjct: 3499 RAAPWRPPARPRATSRRRRRRPCPCG*TGCPAAPCG 3392
>LOC_Os02g50930:12002.t04677:unspliced-genomic RING-H2 finger protein ATL5I, putative, expressed| Length = 1346 Score = 31.3 bits (62), Expect = 9.6 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 / -3 Query: 512 ITTGPRSAHNWNIKKA*EGSSSLWPAAWVPCVVWFLD 622 + T P + HN++I +A SSSL PAA V +L+ Sbjct: 1044 LCTNPLALHNFSIDRAYASSSSLQPAAHAIFVTTWLE 934
>LOC_Os08g13270:12008.t01205:unspliced-genomic expressed protein| Length = 2182 Score = 31.3 bits (62), Expect = 9.6 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 / +2 Query: 84 ASPPPIVVAAGRLLGSVSERR 22 +SPP +V+AAGR +GS RR Sbjct: 440 SSPPQVVLAAGRRVGSAPPRR 502
>LOC_Os07g09980:12007.t00872:unspliced-genomic hypothetical protein| Length = 390 Score = 31.3 bits (62), Expect = 9.6 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +1 / +1 Query: 28 LGDRAEETAGGDHDGRRRGQVEEAPLFP 111 +GDR E G RRRG+V PL P Sbjct: 196 VGDRGGENERGGRSRRRRGRVARGPLAP 279
>LOC_Os06g12450:12006.t01121:unspliced-genomic soluble starch synthase 2-3, chloroplast precursor, putative,| expressed Length = 4979 Score = 31.3 bits (62), Expect = 9.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / -1 Query: 31 GDRAEETAGGDHDGRRRGQVEEAP 102 G+R EE G DGRR G+ EE P Sbjct: 254 GERDEERGG*RDDGRRHGRPEEPP 183 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 305,660,483 Number of extensions: 4855082 Number of successful extensions: 24041 Number of sequences better than 10.0: 36 Length of query: 291 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 242 Effective length of database: 52,856,264 Effective search space: 12791215888 Effective search space used: 12791215888 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)