ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf141k08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105037: | 198 | 5e-51 | 2 | AK120697:Os07g0529800 | 198 | 5e-51 | 3 | AF094774:Os07g0529800 | 198 | 5e-51 | 4 | AK070301:Os05g0498400 | 185 | 4e-47 | 5 | AK058219:Os05g0498400 | 185 | 4e-47 | 6 | Os01g0794500:Os01g0794500 | 164 | 9e-41 | 7 | AK108443:Os04g0627900 | 132 | 3e-31 | 8 | AK070619:Os01g0195500 | 31 | 0.95 | 9 | Os12g0240800:Os12g0240800 | 30 | 1.6 | 10 | AK119767:Os04g0535200 | 30 | 1.6 | 11 | AK101505:Os04g0535200 | 30 | 1.6 | 12 | AK060585:Os04g0535200 | 30 | 1.6 | 13 | AK107196:Os05g0536800 | 30 | 2.1 | 14 | AB028133: | 30 | 2.1 | 15 | AK120657:Os06g0595800 | 29 | 4.7 |
|---|
>AK105037: | Length = 115 Score = 198 bits (503), Expect = 5e-51 Identities = 99/115 (86%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLD+QIPTAFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>AK120697:Os07g0529800 | Length = 115 Score = 198 bits (503), Expect = 5e-51 Identities = 99/115 (86%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLD+QIPTAFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>AF094774:Os07g0529800 | Length = 115 Score = 198 bits (503), Expect = 5e-51 Identities = 99/115 (86%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLD+QIPTAFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>AK070301:Os05g0498400 | Length = 115 Score = 185 bits (469), Expect = 4e-47 Identities = 91/115 (79%), Positives = 99/115 (86%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLDVQ+P+AFDPF +KDYVHVRIQQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSDLDVQLPSAFDPFAEANAEDSGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+ FLVQAGI KK++IKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKDNIKIHGF 115
>AK058219:Os05g0498400 | Length = 115 Score = 185 bits (469), Expect = 4e-47 Identities = 91/115 (79%), Positives = 99/115 (86%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLDVQ+P+AFDPF +KDYVHVRIQQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSDLDVQLPSAFDPFAEANAEDSGAGPGAKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+ FLVQAGI KK++IKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKDNIKIHGF 115
>Os01g0794500:Os01g0794500 | Length = 105 Score = 164 bits (414), Expect = 9e-41 Identities = 81/105 (77%), Positives = 87/105 (82%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLDVQ+P+AFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSDLDVQLPSAFDPFAEANAEDSSVGAGSKDYVHVRIQQRNGRKSLTTVQGLKKEYSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIV 553 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNV+ FLVQ + Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQIAFI 105
>AK108443:Os04g0627900 | Length = 244 Score = 132 bits (332), Expect = 3e-31 Identities = 57/85 (67%), Positives = 77/85 (90%) Frame = +2 Query: 329 DYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 508 DYVHVR+QQRNGRK+LTTVQG+ E++Y+K+L+DLK+E CCNG VV+D ELG++IQLQGD Sbjct: 160 DYVHVRVQQRNGRKTLTTVQGIGGEYNYAKVLRDLKRELCCNGNVVEDKELGKIIQLQGD 219 Query: 509 QRKNVSNFLVQAGIVKKEHIKIHGF 583 R +VS+FL +AG+V+K++IK+HGF Sbjct: 220 HRNSVSDFLAKAGMVRKDNIKVHGF 244
>AK070619:Os01g0195500 | Length = 258 Score = 31.2 bits (69), Expect = 0.95 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +2 Query: 326 KDYVHVRIQQ--RNGRKSLTTVQGLKK-EFSYSKILKDLKKEFCCNGTVVQDTELGQVIQ 496 KD V I++ RN RK +T V+GL+ S K L K+F +VV+ + I Sbjct: 162 KDKQEVVIEKIVRNKRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 221 Query: 497 LQGDQRKNVSNFL 535 +QGD ++ F+ Sbjct: 222 VQGDISYDIVEFI 234
>Os12g0240800:Os12g0240800 | Length = 449 Score = 30.4 bits (67), Expect = 1.6 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -3 Query: 361 ITLLDAYMHVVL*SGSCTSVPSIRLGKGVKGSWDLNVEIRHENSW*EWQK---LHQ 203 +TL+ Y+ VV +CT +PS+R + V+G D E W W+ LHQ Sbjct: 372 VTLVSKYIWVV---ATCTILPSLRQQREVRGDGDTEEEGVGGEGWTRWKVADFLHQ 424
>AK119767:Os04g0535200 | Length = 492 Score = 30.4 bits (67), Expect = 1.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 2 GARQGTQRRPPPPVYKFLSFP 64 G R GT+R PPPP ++ LS P Sbjct: 61 GRRHGTRRAPPPPRHRQLSLP 81
>AK101505:Os04g0535200 | Length = 492 Score = 30.4 bits (67), Expect = 1.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 2 GARQGTQRRPPPPVYKFLSFP 64 G R GT+R PPPP ++ LS P Sbjct: 61 GRRHGTRRAPPPPRHRQLSLP 81
>AK060585:Os04g0535200 | Length = 492 Score = 30.4 bits (67), Expect = 1.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 2 GARQGTQRRPPPPVYKFLSFP 64 G R GT+R PPPP ++ LS P Sbjct: 61 GRRHGTRRAPPPPRHRQLSLP 81
>AK107196:Os05g0536800 | Length = 522 Score = 30.0 bits (66), Expect = 2.1 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Frame = -3 Query: 319 GSCTSVPSIRLGKG----VKGSWDLNVEIRHENSW*EWQK 212 G+CT++ + + KG KG+WD + ENSW + +K Sbjct: 460 GACTALRHVSIFKGGDLKYKGNWDWEMPRLQENSWNDKEK 499
>AB028133: | Length = 235 Score = 30.0 bits (66), Expect = 2.1 Identities = 20/45 (44%), Positives = 21/45 (46%) Frame = +1 Query: 19 PEASSSARL*IPLLPSSLYRRHQTQRGGRTPRTHYQAPLRDPNLP 153 P ASSSA P P RR T GGR+PRT P P P Sbjct: 186 PPASSSAS---PTRPPQPPRRRSTPTGGRSPRTARFDPAMHPVEP 227
>AK120657:Os06g0595800 | Length = 431 Score = 28.9 bits (63), Expect = 4.7 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 Query: 344 VHARSPLIRQLHQRPQHSPRQRGQRQLGSERRDQT*KLLVRVAKATPRTS 195 +H R PL Q + P H R+R +R+ +R D + R + P TS Sbjct: 352 LHPRPPLRPQARRPPHHPVRRRRRRRRLPQRHDAPRLITERAHRPPPPTS 401 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,114,324 Number of extensions: 657076 Number of successful extensions: 1986 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1984 Number of HSP's successfully gapped: 15 Length of query: 285 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 185 Effective length of database: 11,395,755 Effective search space: 2108214675 Effective search space used: 2108214675 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
