ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf141k08 |
|---|---|
| Clone Library Name | barley_pub |
>P56330:SUI1_MAIZE Protein translation factor SUI1 homolog - Zea mays (Maize)| Length = 115 Score = 199 bits (506), Expect = 1e-50 Identities = 100/115 (86%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLD+QIPTAFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>Q9SM41:SUI1_SPOST Protein translation factor SUI1 homolog - Sporobolus stapfianus| (Ressurection grass) Length = 115 Score = 198 bits (503), Expect = 3e-50 Identities = 99/115 (86%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLD+QIPTAFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>P33278:SUI1_ORYSA Protein translation factor SUI1 homolog - Oryza sativa (Rice)| Length = 115 Score = 198 bits (503), Expect = 3e-50 Identities = 99/115 (86%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDLD+QIPTAFDPF SKDYVHVRIQQRNGRKSLTTVQGLKKEFSY+K Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>Q94JV4:SUI12_ARATH Protein translation factor SUI1 homolog 2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 113 Score = 182 bits (463), Expect = 1e-45 Identities = 90/115 (78%), Positives = 101/115 (87%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MSDL+VQ+PTAFDPF +K+YVH+R+QQRNGRKSLTTVQGLKKE+SYSK Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSK 58 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD+ELGQVIQLQGDQRKNVS FLVQAG+VKK++IKIHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>P41568:SUI11_ARATH Protein translation factor SUI1 homolog 1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 113 Score = 179 bits (454), Expect = 1e-44 Identities = 88/115 (76%), Positives = 100/115 (86%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MS+LD Q+PTAFDPF +K+YVH+R+QQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD+ELGQVIQLQGDQRKNVS FLVQAG+VKK++IKIHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>O48650:SUI1_SALBA Protein translation factor SUI1 homolog - Salix bakko (Japanese| willow) Length = 113 Score = 177 bits (450), Expect = 4e-44 Identities = 90/115 (78%), Positives = 98/115 (85%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MS+ D IPTAFDPF +KDYVHVR+QQRNGRKSLTTVQGLKK++SY+K Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAG--TKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNK 58 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVS+FLVQAGIVKKE+IKIHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
>Q9SQF4:SUI1_BRAOL Protein translation factor SUI1 homolog - Brassica oleracea (Wild| cabbage) Length = 113 Score = 177 bits (448), Expect = 6e-44 Identities = 87/115 (75%), Positives = 99/115 (86%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 MS+LD Q+PTAFDPF +K+YVH+R+QQRNGRKSLTTVQGLKKE+SY+K Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAG--TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTK 58 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKKEFCCNGTVVQD+ELGQVIQLQGDQRKNVS FLVQAG+VKK+ I+IHGF Sbjct: 59 ILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
>O82569:SUI1_PIMBR Protein translation factor SUI1 homolog - Pimpinella brachycarpa| Length = 113 Score = 164 bits (415), Expect = 4e-40 Identities = 82/115 (71%), Positives = 91/115 (79%) Frame = +2 Query: 239 MSDLDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 418 M D D+QIPT+FDPF +K+YVH+RIQQRNGRKSLTTVQGLKKE SY K Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGS--TKEYVHIRIQQRNGRKSLTTVQGLKKELSYDK 58 Query: 419 ILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 ILKDLKK CCNGTVV D ELG+VIQLQGDQRKNVS F+VQAGIVKK+ IK+H F Sbjct: 59 ILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
>P61220:EIF1B_PIG Eukaryotic translation initiation factor 1b - Sus scrofa (Pig)| Length = 113 Score = 127 bits (320), Expect = 4e-29 Identities = 57/110 (51%), Positives = 79/110 (71%) Frame = +2 Query: 254 VQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 433 +Q +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 434 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>Q9CXU9:EIF1B_MOUSE Eukaryotic translation initiation factor 1b - Mus musculus (Mouse)| Length = 113 Score = 127 bits (320), Expect = 4e-29 Identities = 57/110 (51%), Positives = 79/110 (71%) Frame = +2 Query: 254 VQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 433 +Q +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 434 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>Q4R4X9:EIF1B_MACFA Eukaryotic translation initiation factor 1b - Macaca fascicularis| (Crab eating macaque) (Cynomolgus monkey) Length = 113 Score = 127 bits (320), Expect = 4e-29 Identities = 57/110 (51%), Positives = 79/110 (71%) Frame = +2 Query: 254 VQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 433 +Q +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 434 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>O60739:EIF1B_HUMAN Eukaryotic translation initiation factor 1b - Homo sapiens (Human)| Length = 113 Score = 127 bits (320), Expect = 4e-29 Identities = 57/110 (51%), Positives = 79/110 (71%) Frame = +2 Query: 254 VQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDL 433 +Q +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K Sbjct: 4 IQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAF 63 Query: 434 KKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 KK+F CNGTV++ E G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF Sbjct: 64 KKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>Q5RFF4:EIF1_PONPY Eukaryotic translation initiation factor 1 - Pongo pygmaeus| (Orangutan) Length = 113 Score = 124 bits (310), Expect = 6e-28 Identities = 54/105 (51%), Positives = 75/105 (71%) Frame = +2 Query: 269 AFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 448 +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 449 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 CNGTV++ E G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>P41567:EIF1_HUMAN Eukaryotic translation initiation factor 1 - Homo sapiens (Human)| Length = 113 Score = 124 bits (310), Expect = 6e-28 Identities = 54/105 (51%), Positives = 75/105 (71%) Frame = +2 Query: 269 AFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 448 +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 449 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 CNGTV++ E G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>Q5E938:EIF1_BOVIN Eukaryotic translation initiation factor 1 - Bos taurus (Bovine)| Length = 113 Score = 124 bits (310), Expect = 6e-28 Identities = 54/105 (51%), Positives = 75/105 (71%) Frame = +2 Query: 269 AFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 448 +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 449 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 CNGTV++ E G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>P48024:EIF1_MOUSE Eukaryotic translation initiation factor 1 - Mus musculus (Mouse)| Length = 113 Score = 123 bits (309), Expect = 8e-28 Identities = 53/105 (50%), Positives = 75/105 (71%) Frame = +2 Query: 269 AFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 448 +FDPF ++DY+H+RIQQRNGRK+LTTVQG+ ++ K++K KK+F Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68 Query: 449 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 CNGTV++ E G+VIQLQGDQRKN+ FL++ G+ K + +K+HGF Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
>P42678:SUI1_ANOGA Protein translation factor SUI1 homolog - Anopheles gambiae| (African malaria mosquito) Length = 110 Score = 113 bits (283), Expect = 8e-25 Identities = 54/112 (48%), Positives = 73/112 (65%) Frame = +2 Query: 248 LDVQIPTAFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILK 427 + +Q FDPF VH+RIQQRNGRK+LTTVQGL E+ KI++ Sbjct: 1 MSIQNLNTFDPFADAIKGADYDVQDG--LVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVR 58 Query: 428 DLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 KKEF CNGTV++ E G+V+QLQGDQR+N+ +L ++G+ K E +K+HGF Sbjct: 59 ACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110
>P79060:SUI1_SCHPO Protein translation factor sui1 - Schizosaccharomyces pombe| (Fission yeast) Length = 109 Score = 113 bits (282), Expect = 1e-24 Identities = 53/83 (63%), Positives = 68/83 (81%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQR 514 +H+RIQQRNGRK+LTTVQGL +EF +IL+ LKK+F CNGT+V+D +LG+VIQLQGDQR Sbjct: 27 IHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACNGTIVKDDDLGEVIQLQGDQR 86 Query: 515 KNVSNFLVQAGIVKKEHIKIHGF 583 V FL Q ++K++IKIHGF Sbjct: 87 IKVMEFLTQQLGLQKKNIKIHGF 109
>P32911:SUI1_YEAST Eukaryotic translation initiation factor eIF-1 - Saccharomyces| cerevisiae (Baker's yeast) Length = 108 Score = 112 bits (281), Expect = 1e-24 Identities = 53/105 (50%), Positives = 75/105 (71%) Frame = +2 Query: 269 AFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 448 +FDPF + +Y+H+RIQQRNGRK+LTTVQG+ +E+ +ILK LKK+F Sbjct: 8 SFDPFADTGDDETA----TSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFA 63 Query: 449 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 CNG +V+D E+G++IQLQGDQR V F++ ++K++IKIHGF Sbjct: 64 CNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108
>Q755R1:SUI1_ASHGO Protein translation factor SUI1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 108 Score = 112 bits (281), Expect = 1e-24 Identities = 54/105 (51%), Positives = 74/105 (70%) Frame = +2 Query: 269 AFDPFXXXXXXXXXXXXXSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFC 448 +FDPF S +Y+H+RIQQRNGRK+LTTVQG+ +E+ +ILK L+K+F Sbjct: 8 SFDPFADTGDDEAS----SSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFG 63 Query: 449 CNGTVVQDTELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 583 CNG +V+D E+G++IQLQGDQR V FL+ + K++IKIHGF Sbjct: 64 CNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
>Q9VZS3:SUI1_DROME Protein translation factor SUI1 homolog - Drosophila melanogaster| (Fruit fly) Length = 110 Score = 112 bits (279), Expect = 2e-24 Identities = 48/83 (57%), Positives = 65/83 (78%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQR 514 VH+RIQQRNGRK+LTTVQGL E+ KI++ KKEF CNGTV++ E G+V+QLQGDQR Sbjct: 28 VHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQR 87 Query: 515 KNVSNFLVQAGIVKKEHIKIHGF 583 +N+ +L + G+ K + +K+HGF Sbjct: 88 ENICQWLTKVGLAKPDQLKVHGF 110
>P51971:EIF1_CHICK Eukaryotic translation initiation factor 1 - Gallus gallus| (Chicken) Length = 79 Score = 105 bits (263), Expect = 2e-22 Identities = 46/79 (58%), Positives = 62/79 (78%) Frame = +2 Query: 347 IQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQRKNVS 526 IQQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ E G+VIQLQGDQRKN+ Sbjct: 1 IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60 Query: 527 NFLVQAGIVKKEHIKIHGF 583 FLV+ G+ K + +K+HGF Sbjct: 61 QFLVEIGLAKDDQLKVHGF 79
>Q5UQD7:SUI1_MIMIV Protein translation factor SUI1 homolog - Mimivirus| Length = 106 Score = 63.9 bits (154), Expect = 8e-10 Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 1/84 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQD-TELGQVIQLQGDQ 511 +H++ +QR KS+T ++ + ++ LK LK F C+G++ Q+ + + IQL GD Sbjct: 23 IHIKTKQRTKTKSITIIENIPEKIDLKLFLKKLKYTFHCSGSIQQNYDDDSKFIQLSGDH 82 Query: 512 RKNVSNFLVQAGIVKKEHIKIHGF 583 R+ V NFL++ IVK+ +I +HG+ Sbjct: 83 RELVKNFLIKNSIVKESNIVMHGY 106
>Q97BW9:SUI1_THEVO Protein translation factor SUI1 homolog - Thermoplasma volcanium| Length = 100 Score = 43.9 bits (102), Expect = 8e-04 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLKKEFS-YSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 V + + +R K +T ++G+ + KI K+LKK+ GTV + G++I+LQGD Sbjct: 26 VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELKKKVASGGTVKE----GRIIELQGDH 81 Query: 512 RKNVSNFLVQAG 547 R+ V FL G Sbjct: 82 RQEVKKFLEDMG 93
>Q5UZP9:SUI1_HALMA Protein translation factor SUI1 homolog - Haloarcula marismortui| (Halobacterium marismortui) Length = 97 Score = 42.4 bits (98), Expect = 0.002 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 +++RI +R K +T ++G K+ + DLK +F C GTV E GQ I+LQG+ Sbjct: 27 INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81 Query: 512 RKNVSNFLVQAG 547 V +FL G Sbjct: 82 TGRVEDFLRDKG 93
>Q9HME3:SUI1_HALSA Protein translation factor SUI1 homolog - Halobacterium salinarium| (Halobacterium halobium) Length = 97 Score = 42.0 bits (97), Expect = 0.003 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 + +RI +R K +T ++G K+ + DLK +F C GT V+D E I+LQG+ Sbjct: 27 IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81 Query: 512 RKNVSNFLVQAG 547 V +FL G Sbjct: 82 SGRVEDFLRNKG 93
>Q8U006:SUI1_PYRFU Protein translation factor SUI1 homolog - Pyrococcus furiosus| Length = 98 Score = 40.4 bits (93), Expect = 0.009 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +2 Query: 326 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQ 496 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I+ Sbjct: 18 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 72 Query: 497 LQGDQRKNVSNFLVQAG 547 LQGD R + LV+ G Sbjct: 73 LQGDHRDRIKKLLVELG 89
>P58193:SUI1_PYRHO Protein translation factor SUI1 homolog - Pyrococcus horikoshii| Length = 99 Score = 38.9 bits (89), Expect = 0.026 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 + V I++ K T ++G+ +KEF +I K LK + C GT I+LQGD Sbjct: 24 IKVYIERARYGKVKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IELQGDH 78 Query: 512 RKNVSNFLVQAG 547 R + L + G Sbjct: 79 RDRIKKLLAELG 90
>Q9V1U3:SUI1_PYRAB Protein translation factor SUI1 homolog - Pyrococcus abyssi| Length = 99 Score = 38.9 bits (89), Expect = 0.026 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Frame = +2 Query: 326 KDYVHVRIQQRNGR--KSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQ 496 K+ +R+ R K T ++G+ +KEF +I K LK + C GT I+ Sbjct: 19 KEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLKAKLACGGTAKNGR-----IE 73 Query: 497 LQGDQRKNVSNFLVQAG 547 LQGD R + L + G Sbjct: 74 LQGDHRDRIKKLLAELG 90
>Q5JDH7:SUI1_PYRKO Protein translation factor SUI1 homolog - Pyrococcus kodakaraensis| (Thermococcus kodakaraensis) Length = 98 Score = 38.5 bits (88), Expect = 0.034 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 + V +++ K T ++G+ +KEF I K LK + C GT I+LQGD Sbjct: 23 IRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLKAKLACGGTAKNGR-----IELQGDH 77 Query: 512 RKNVSNFLVQAG 547 R V L + G Sbjct: 78 RDRVKKLLAELG 89
>Q55397:Y546_SYNY3 Uncharacterized protein sll0546 - Synechocystis sp. (strain PCC| 6803) Length = 111 Score = 37.7 bits (86), Expect = 0.058 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Frame = +2 Query: 338 HVRIQQ-RNGRK--SLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 508 +VRIQ R+GRK ++T V GL+ + L K FC +G +++ +++QGD Sbjct: 35 NVRIQATRSGRKGKTVTVVSGLQLSAMGQQALLKALKSFCGSGGTLKE----DCVEIQGD 90 Query: 509 QRKNVSNFLVQAGIVKK 559 QR+ + +L++ G K Sbjct: 91 QREKILAYLLKQGYKAK 107
>Q8PYK3:SUI1_METMA Protein translation factor SUI1 homolog - Methanosarcina mazei| (Methanosarcina frisia) Length = 102 Score = 35.4 bits (80), Expect = 0.29 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 + V++ +R K +T V+G E ++ LK +F C GTV G ++LQG+ Sbjct: 28 ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82 Query: 512 RKNVSNFLVQAGIVKKEHIK 571 + L++ G E IK Sbjct: 83 LTRMKEVLMEKGF-SAEQIK 101
>Q8TIT3:SUI1_METAC Protein translation factor SUI1 homolog - Methanosarcina| acetivorans Length = 102 Score = 35.4 bits (80), Expect = 0.29 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 + V++ +R K +T V+G E ++ LK +F C GTV G ++LQG+ Sbjct: 28 ITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTV-----KGNTVELQGNH 82 Query: 512 RKNVSNFLVQAGIVKKEHIK 571 + L++ G E IK Sbjct: 83 LARMKEVLMEKGF-SAEQIK 101
>Q8TX33:SUI1_METKA Protein translation factor SUI1 homolog - Methanopyrus kandleri| Length = 106 Score = 33.5 bits (75), Expect = 1.1 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLKKE-FSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 + + +Q K +T ++GL ++ LK+E C GT + G++I LQGD Sbjct: 30 IKIYTEQVRPGKVVTIIEGLDDAGIDLQELASKLKRECACGGTAKE----GKII-LQGDH 84 Query: 512 RKNVSNFLVQAGIVKKEHIKI 574 R V FL++ ++ I++ Sbjct: 85 RNKVREFLIKKEGFSEDAIEV 105
>O42929:DENR_SCHPO Density-regulated protein homolog - Schizosaccharomyces pombe| (Fission yeast) Length = 190 Score = 33.5 bits (75), Expect = 1.1 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +2 Query: 335 VHVRIQQRNGRKSLTTVQGLKK-EFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGDQ 511 V ++ +R RK +TTVQGL K K L +F +V + + I +QGD Sbjct: 99 VLIKTIERTKRKRVTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDL 158 Query: 512 RKNVSNFLVQA-GIVKKEHIKI 574 ++ +F+++ V +++IKI Sbjct: 159 NYDIFDFILEKFKEVPEDNIKI 180
>P0A2G7:YCIH_SALTY Uncharacterized protein yciH - Salmonella typhimurium| Length = 108 Score = 32.7 bits (73), Expect = 1.9 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Frame = +2 Query: 341 VRIQ-QRNGRKS--LTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 508 VRIQ Q +GRK + + G++ + +K+ +LKK+ C G V + +I++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87 Query: 509 QRKNVSNFLVQAGIVKK 559 +R + + L G+ K Sbjct: 88 KRDLIKSLLEAKGMKVK 104
>P0A2G8:YCIH_SALTI Uncharacterized protein yciH - Salmonella typhi| Length = 108 Score = 32.7 bits (73), Expect = 1.9 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Frame = +2 Query: 341 VRIQ-QRNGRKS--LTTVQGLK-KEFSYSKILKDLKKEFCCNGTVVQDTELGQVIQLQGD 508 VRIQ Q +GRK + + G++ + +K+ +LKK+ C G V + +I++QGD Sbjct: 33 VRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEG-----IIEIQGD 87 Query: 509 QRKNVSNFLVQAGIVKK 559 +R + + L G+ K Sbjct: 88 KRDLIKSLLEAKGMKVK 104
>P20579:TRPE_PSEPU Anthranilate synthase component 1 - Pseudomonas putida| Length = 493 Score = 30.4 bits (67), Expect = 9.3 Identities = 21/83 (25%), Positives = 43/83 (51%) Frame = -3 Query: 538 DKEV*DVLPLITLELNDLSKFCVLDNCTIAAKLFLEVFEDLAVAELLLQTLDSGQALATI 359 DKE+ + L LI L ND+ + + + K+ +E + ++ + + + +GQ + Sbjct: 330 DKEIAEHLMLIDLGRNDVGRVSSTGSVRLTEKMVIERYSNV----MHIVSNVAGQLREGL 385 Query: 358 TLLDAYMHVVL*SGSCTSVPSIR 290 T +DA + +L +G+ + P IR Sbjct: 386 TAMDA-LRAILPAGTLSGAPKIR 407
>Q95116:TSP2_BOVIN Thrombospondin-2 precursor - Bos taurus (Bovine)| Length = 1170 Score = 30.4 bits (67), Expect = 9.4 Identities = 38/142 (26%), Positives = 51/142 (35%), Gaps = 15/142 (10%) Frame = +1 Query: 247 SRRSDPNCL*PLC----RGECWGRWCSCRIK---GLRACTHPAA*WSQEPDHCPGSEEGV 405 S R C P C R W W +C + G+R T S EP H G ++ V Sbjct: 477 SGRETKACQGPPCPVDGRWSPWSPWSACTVTCAGGIRERTRVCN--SPEPQH--GGKDCV 532 Query: 406 QLQQDPQRPQERVLLQWYSCPGHRTWTGHSTPG*SEEERLKLP--------CPGGHCEEG 561 ++ Q + SCP + PG E P CPGG G Sbjct: 533 GGAKEQQMCNRK------SCPIDGCLSNPCFPG---AECSSFPDGSWSCGSCPGGFLGNG 583 Query: 562 THQDSWFLSNCQLLIRVCMQSS 627 TH + L C ++ VC +S Sbjct: 584 THCED--LDECAVVTDVCFATS 603 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 155,396,987 Number of extensions: 3627474 Number of successful extensions: 9210 Number of sequences better than 10.0: 39 Number of HSP's gapped: 9196 Number of HSP's successfully gapped: 39 Length of query: 285 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 173 Effective length of database: 69,965,399 Effective search space: 12104014027 Effective search space used: 12104014027 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
