Clone Information

BLAST Search Result

Clone Name	FLbaf141j06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|AJ000232.1\|HVJ000232 Hordeum vulgare mRNA for expressed sequ...	595	e-166
2	dbj\|AK241960.1\| Oryza sativa (japonica cultivar-group) cDNA, clo...	281	3e-72
3	ref\|NM_001066465.1\| Oryza sativa (japonica cultivar-group) Os07g...	260	1e-65
4	gb\|AY106337.1\| Zea mays PCO081460 mRNA sequence	194	5e-46
5	gb\|DQ244335.1\| Zea mays clone 5083 mRNA sequence	163	2e-36
6	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	153	2e-33
7	dbj\|AP004401.5\| Oryza sativa (japonica cultivar-group) genomic D...	153	2e-33
8	gb\|AC125100.4\| Mus musculus BAC clone RP24-206N14 from 9, comple...	48	0.077
9	gb\|CP000463.1\| Rhodopseudomonas palustris BisA53, complete genome	46	0.30
10	gb\|BT014256.1\| Lycopersicon esculentum clone 133458F, mRNA sequence	46	0.30
11	gb\|AF401574.1\| Ictalurus punctatus ribosomal protein L19 mRNA, c...	46	0.30
12	dbj\|AP007255.1\| Magnetospirillum magneticum AMB-1 DNA, complete ...	44	1.2
13	emb\|AL935029.6\| Zebrafish DNA sequence from clone CH211-168J20 i...	44	1.2
14	gb\|AE014295.3\| Bifidobacterium longum NCC2705, complete genome	44	1.2
15	emb\|CT832999.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	42	4.7
16	emb\|CR855164.1\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	42	4.7
17	gb\|CP000416.1\| Lactobacillus brevis ATCC 367, complete genome	42	4.7
18	ref\|NM_001065141.1\| Oryza sativa (japonica cultivar-group) Os06g...	42	4.7
19	ref\|NM_001059503.1\| Oryza sativa (japonica cultivar-group) Os04g...	42	4.7
20	gb\|CP000285.1\| Chromohalobacter salexigens DSM 3043, complete ge...	42	4.7
21	gb\|AC115940.11\| Mus musculus chromosome 5, clone RP24-553D12, co...	42	4.7
22	gb\|AC127275.4\| Mus musculus BAC clone RP24-207I8 from chromosome...	42	4.7
23	gb\|AC145968.3\| Pan troglodytes BAC clone RP43-12H15 from 7, comp...	42	4.7
24	gb\|AC073330.6\| Homo sapiens BAC clone RP11-409J21 from 7, comple...	42	4.7
25	gb\|AC092999.3\| Homo sapiens 3 BAC RP11-170K4 (Roswell Park Cance...	42	4.7
26	ref\|XM_744046.1\| Aspergillus fumigatus Af293 G-patch RNA maturat...	42	4.7
27	gb\|AC093830.3\| Homo sapiens BAC clone RP11-401G24 from 4, comple...	42	4.7
28	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
29	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
30	gb\|AC091774.7\| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ...	42	4.7
31	emb\|CR380956.1\| Candida glabrata strain CBS138 chromosome J comp...	42	4.7
32	emb\|AL731584.3\|OSJN00224 Oryza sativa genomic DNA, chromosome 4,...	42	4.7
33	emb\|AL606636.4\|OSJN00075 Oryza sativa genomic DNA, chromosome 4,...	42	4.7
34	gb\|AC010984.7\| Homo sapiens BAC clone RP11-510C1 from 2, complet...	42	4.7
35	gb\|AC132479.2\| Homo sapiens BAC clone RP11-769N11 from 2, comple...	42	4.7
36	gb\|AC140481.3\| Homo sapiens BAC clone RP11-1216L17 from 2, compl...	42	4.7
37	dbj\|AP007231.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
38	dbj\|AP003769.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
39	dbj\|AP006065.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
40	gb\|AC092602.2\| Homo sapiens BAC clone RP11-134G21 from 2, comple...	42	4.7
41	gb\|AC011994.10\| Homo sapiens BAC clone RP11-50E1 from 2, complet...	42	4.7
42	dbj\|AK065178.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	4.7
43	ref\|XM_447949.1\| Candida glabrata CBS138, CAGL0J05610g partial mRNA	42	4.7
44	emb\|BX248325.7\| Zebrafish DNA sequence from clone CH211-233I11 i...	42	4.7
45	dbj\|D12936.1\|LILNORENV Louping ill virus gene for envelope glyco...	42	4.7
46	dbj\|AB010644.1\| Candida glabrata Top2 gene for TopoisomeraseII, ...	42	4.7

>emb|AJ000232.1|HVJ000232 Hordeum vulgare mRNA for expressed sequence tag
          Length = 300
 Score =  595 bits (300), Expect = e-166
 Identities = 300/300 (100%)
 Strand = Plus / Plus

                                                                        
Query: 842  cacgcttcttcccttcaaatccttttcctgctccttttggtggccctgggagtgttccac 901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    cacgcttcttcccttcaaatccttttcctgctccttttggtggccctgggagtgttccac 60

                                                                        
Query: 902  ctggtggccgttacgatccaattggcccgcccgatgttccaggatttgaaccatctcgct 961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctggtggccgttacgatccaattggcccgcccgatgttccaggatttgaaccatctcgct 120

                                                                        
Query: 962  ttgtaaggcgttcgaggcatccaggtggaagcactcacccagacctcgagttcttccagc 1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ttgtaaggcgttcgaggcatccaggtggaagcactcacccagacctcgagttcttccagc 180

                                                                        
Query: 1022 aaggcccagacttctgagactcagcttcataccaacctccacctgcaccctgcgctgaat 1081
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaggcccagacttctgagactcagcttcataccaacctccacctgcaccctgcgctgaat 240

                                                                        
Query: 1082 gactctgctttgtttctgctgtgctcctgaactttgttgcagtagaccctgcttgggaag 1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gactctgctttgtttctgctgtgctcctgaactttgttgcagtagaccctgcttgggaag 300

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>dbj|AK241960.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075093E01,
           full insert sequence
          Length = 1270

 Score =  281 bits (142), Expect = 3e-72
 Identities = 433/530 (81%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgatggtgactgacgcggccgcgttggcggtcgtgaaggccgcgcgccccgtcttccgcg 217
           |||||||||| ||||| |||||| |||| ||||||||||| |||||||| | ||||||||
Sbjct: 103 cgatggtgaccgacgccgccgcgatggccgtcgtgaaggcggcgcgcccggccttccgcg 162

                                                                       
Query: 218 gcgcccacgatggcgtcgcgtttgccacaaacgccgcgttcctcgccgctggatactctc 277
           |||||||||| || ||||| || ||| | |||||||||||||||||||| || ||||| |
Sbjct: 163 gcgcccacgacggggtcgccttcgccgccaacgccgcgttcctcgccgccggctactccc 222

                                                                       
Query: 278 tctgcgccgttggtcctgccgcgcttaccgaccccctgcccgcagttgacgatgaggtgg 337
           |||||||||| || || |||||||| |||||||||| |||| ||| ||| || |||||||
Sbjct: 223 tctgcgccgtcggccccgccgcgctcaccgaccccccgccctcaggtgaagaggaggtgg 282

                                                                       
Query: 338 gaattgatgggtggaacagtatggataattgctatgcctttttgtactccaaggaggagg 397
           | |||||||| |||||||| ||||||||||| ||||| |||||||||  |||||||||| 
Sbjct: 283 ggattgatggttggaacagcatggataattgttatgcatttttgtacatcaaggaggaga 342

                                                                       
Query: 398 agggcaagaagaagcgcattttagtgaaatgtctagtgattgatgacttccttgctattg 457
            |||||||||||| ||  | || || |||||||| ||||| | |||  ||||||| ||||
Sbjct: 343 ggggcaagaagaaacgggtattggtaaaatgtctggtgatcggtgatgtccttgccattg 402

                                                                       
Query: 458 atgcgctggatcttgaggcacaacacaaggaaccctgcaatgtccagataaatgtgaagg 517
           |||  |||||||||||| ||||  | || |  || |  ||| ||||||| ||||||||||
Sbjct: 403 atgtcctggatcttgagtcacagaataaaggcccttataatatccagatcaatgtgaagg 462

                                                                       
Query: 518 atttcttctctgaagaacagcccaagaattacaaggatatgtacaagaattttgcgggct 577
           |||||||||| || || ||||| ||||| ||   | | |||||||| || ||||| ||||
Sbjct: 463 atttcttctccgaggagcagccaaagaactatgggaacatgtacaaaaactttgcaggct 522

                                                                       
Query: 578 tcattaatacccttaactcaagcttattggttgaattggatggtaaggatgctgctgctg 637
           | ||| | ||| | |||||||    ||||    |||||||||  |||||||||| |||||
Sbjct: 523 taattgagaccatgaactcaaatgcattgagcaaattggatgagaaggatgctggtgctg 582

                                                             
Query: 638 cccagaagcctgatgttgagagcagttcatcaataaacagttctgaaaat 687
           || |||| ||||| |||||||  || ||||||||| |||| |||||||||
Sbjct: 583 ccaagaaccctgaggttgagactagctcatcaatacacagatctgaaaat 632



 Score =  262 bits (132), Expect = 3e-66
 Identities = 263/306 (85%), Gaps = 3/306 (0%)
 Strand = Plus / Plus

                                                                        
Query: 719  ctggcctgatttatcctccagtagctccgtttggtcatgatgacaccttccctgctcctg 778
            ||||| || ||||||||||| |||||||  |||||||||||||  |||||||||  ||||
Sbjct: 655  ctggcttggtttatcctccaatagctccacttggtcatgatgatgccttccctggccctg 714

                                                                        
Query: 779  gtgcaggtttctaccctcacagtggt---ggtgcgggtggtagtatgcacgttggtccaa 835
            | ||||| ||||| ||||| ||||||   |||| |||||| || ||||| ||||||||||
Sbjct: 715  gcgcaggcttctatcctcatagtggtattggtgggggtggcagcatgcatgttggtccaa 774

                                                                        
Query: 836  atgatccacgcttcttcccttcaaatccttttcctgctccttttggtggccctgggagtg 895
            | |||||||||||||| ||||| ||||| || ||||  || |||||||||||||||||||
Sbjct: 775  acgatccacgcttctttccttctaatcccttccctgtgccctttggtggccctgggagtg 834

                                                                        
Query: 896  ttccacctggtggccgttacgatccaattggcccgcccgatgttccaggatttgaaccat 955
            ||||||| ||||| ||||| ||||||||||| || || |||||||||||||||||||| |
Sbjct: 835  ttccaccaggtggtcgttatgatccaattggtccaccagatgttccaggatttgaacctt 894

                                                                        
Query: 956  ctcgctttgtaaggcgttcgaggcatccaggtggaagcactcacccagacctcgagttct 1015
            |||||||||| |||||| |||||| ||||| ||| |  |||||||||||||| |||||||
Sbjct: 895  ctcgctttgtgaggcgtccgaggcctccagctgggactactcacccagaccttgagttct 954

                  
Query: 1016 tccagc 1021
            ||||||
Sbjct: 955  tccagc 960

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>ref|NM_001066465.1| Oryza sativa (japonica cultivar-group) Os07g0548900 (Os07g0548900)
            mRNA, complete cds
          Length = 822

 Score =  260 bits (131), Expect = 1e-65
 Identities = 256/297 (86%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                        
Query: 728  tttatcctccagtagctccgtttggtcatgatgacaccttccctgctcctggtgcaggtt 787
            ||||||||||| |||||||  |||||||||||||  |||||||||  ||||| ||||| |
Sbjct: 503  tttatcctccaatagctccacttggtcatgatgatgccttccctggccctggcgcaggct 562

                                                                        
Query: 788  tctaccctcacagtggt---ggtgcgggtggtagtatgcacgttggtccaaatgatccac 844
            |||| ||||| ||||||   |||| |||||| || ||||| ||||||||||| |||||||
Sbjct: 563  tctatcctcatagtggtattggtgggggtggcagcatgcatgttggtccaaacgatccac 622

                                                                        
Query: 845  gcttcttcccttcaaatccttttcctgctccttttggtggccctgggagtgttccacctg 904
            ||||||| ||||| ||||| || ||||  || |||||||||||||||||||||||||| |
Sbjct: 623  gcttctttccttctaatcccttccctgtgccctttggtggccctgggagtgttccaccag 682

                                                                        
Query: 905  gtggccgttacgatccaattggcccgcccgatgttccaggatttgaaccatctcgctttg 964
            |||| ||||| ||||||||||| || || |||||||||||||||||||| ||||||||||
Sbjct: 683  gtggtcgttatgatccaattggtccaccagatgttccaggatttgaaccttctcgctttg 742

                                                                     
Query: 965  taaggcgttcgaggcatccaggtggaagcactcacccagacctcgagttcttccagc 1021
            | |||||| |||||| ||||| ||| |  |||||||||||||| |||||||||||||
Sbjct: 743  tgaggcgtccgaggcctccagctgggactactcacccagaccttgagttcttccagc 799



 Score =  246 bits (124), Expect = 2e-61
 Identities = 403/496 (81%)
 Strand = Plus / Plus

                                                                       
Query: 182 tggcggtcgtgaaggccgcgcgccccgtcttccgcggcgcccacgatggcgtcgcgtttg 241
           |||| ||||||||||| |||||||| | |||||||||||||||||| || ||||| || |
Sbjct: 2   tggccgtcgtgaaggcggcgcgcccggccttccgcggcgcccacgacggggtcgccttcg 61

                                                                       
Query: 242 ccacaaacgccgcgttcctcgccgctggatactctctctgcgccgttggtcctgccgcgc 301
           || | |||||||||||||||||||| || ||||| ||||||||||| || || |||||||
Sbjct: 62  ccgccaacgccgcgttcctcgccgccggctactccctctgcgccgtcggccccgccgcgc 121

                                                                       
Query: 302 ttaccgaccccctgcccgcagttgacgatgaggtgggaattgatgggtggaacagtatgg 361
           | |||||||||| |||| ||| ||| || |||||||| |||||||| |||||||| ||||
Sbjct: 122 tcaccgaccccccgccctcaggtgaagaggaggtggggattgatggttggaacagcatgg 181

                                                                       
Query: 362 ataattgctatgcctttttgtactccaaggaggaggagggcaagaagaagcgcattttag 421
           ||||||| ||||| |||||||||  ||||||||||  |||||||||||| ||  | || |
Sbjct: 182 ataattgttatgcatttttgtacatcaaggaggagaggggcaagaagaaacgggtattgg 241

                                                                       
Query: 422 tgaaatgtctagtgattgatgacttccttgctattgatgcgctggatcttgaggcacaac 481
           | |||||||| ||||| | |||  ||||||| |||||||  |||||||||||| ||||  
Sbjct: 242 taaaatgtctggtgatcggtgatgtccttgccattgatgtcctggatcttgagtcacaga 301

                                                                       
Query: 482 acaaggaaccctgcaatgtccagataaatgtgaaggatttcttctctgaagaacagccca 541
           | || |  || |  ||| ||||||| |||||||||||||||||||| || || ||||| |
Sbjct: 302 ataaaggcccttataatatccagatcaatgtgaaggatttcttctccgaggagcagccaa 361

                                                                       
Query: 542 agaattacaaggatatgtacaagaattttgcgggcttcattaatacccttaactcaagct 601
           |||| ||   | | |||||||| || ||||| ||||| ||| | ||| | |||||||   
Sbjct: 362 agaactatgggaacatgtacaaaaactttgcaggcttaattgagaccatgaactcaaatg 421

                                                                       
Query: 602 tattggttgaattggatggtaaggatgctgctgctgcccagaagcctgatgttgagagca 661
            ||||    |||||||||  |||||||||| ||||||| |||| ||||| |||||||  |
Sbjct: 422 cattgagcaaattggatgagaaggatgctggtgctgccaagaaccctgaggttgagacta 481

                           
Query: 662 gttcatcaataaacag 677
           | ||||||||| ||||
Sbjct: 482 gctcatcaatacacag 497

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>gb|AY106337.1| Zea mays PCO081460 mRNA sequence
          Length = 1287

 Score =  194 bits (98), Expect = 5e-46
 Identities = 335/414 (80%)
 Strand = Plus / Plus

                                                                       
Query: 157 acgatggtgactgacgcggccgcgttggcggtcgtgaaggccgcgcgccccgtcttccgc 216
           ||||||||||  ||||| || ||| |||| ||||||| ||| |||||||| | | |||| 
Sbjct: 144 acgatggtgaacgacgccgcggcgatggccgtcgtgagggcggcgcgcccagccctccgt 203

                                                                       
Query: 217 ggcgcccacgatggcgtcgcgtttgccacaaacgccgcgttcctcgccgctggatactct 276
           |||||||||||||||||||| || ||| |  ||||||| |||||||||| ||| ||||| 
Sbjct: 204 ggcgcccacgatggcgtcgccttcgccgcccacgccgccttcctcgccgatgggtactcg 263

                                                                       
Query: 277 ctctgcgccgttggtcctgccgcgcttaccgaccccctgcccgcagttgacgatgaggtg 336
           ||||||||||| || |||||||||||  ||||||||  ||||  || ||| || ||||||
Sbjct: 264 ctctgcgccgtcggccctgccgcgctcgccgacccctcgcccttaggtgatgaggaggtg 323

                                                                       
Query: 337 ggaattgatgggtggaacagtatggataattgctatgcctttttgtactccaaggaggag 396
           || |||||||| |||||||  ||||| ||||| || |||||||||||   ||||||||||
Sbjct: 324 gggattgatggttggaacatcatggagaattgttacgcctttttgtatagcaaggaggag 383

                                                                       
Query: 397 gagggcaagaagaagcgcattttagtgaaatgtctagtgattgatgacttccttgctatt 456
            |||||||||||||  |  |  ||||||||||||| ||||| | |||  | ||||| |||
Sbjct: 384 aagggcaagaagaaaagggtactagtgaaatgtctggtgatcggtgaagtacttgcaatt 443

                                                                       
Query: 457 gatgcgctggatcttgaggcacaacacaaggaaccctgcaatgtccagataaatgtgaag 516
           ||||   ||||||||||||||||| | ||||  || |  ||| ||||||| |||||||| 
Sbjct: 444 gatgtcttggatcttgaggcacaagataaggcgccttataatatccagattaatgtgaaa 503

                                                                 
Query: 517 gatttcttctctgaagaacagcccaagaattacaaggatatgtacaagaatttt 570
           || |||||    ||||| ||||| ||||||||   |||||||||||||||||||
Sbjct: 504 gacttctttgtcgaagagcagccaaagaattatggggatatgtacaagaatttt 557



 Score =  186 bits (94), Expect = 1e-43
 Identities = 269/326 (82%), Gaps = 6/326 (1%)
 Strand = Plus / Plus

                                                                        
Query: 721  ggcctgatttatcctccagtagctccgtttggtcatgatgacaccttccctgctcctggt 780
            ||||| |||||||||||| |||| ||| |||||  ||||||   || |||||  ||||||
Sbjct: 729  ggcctaatttatcctccaatagcaccgattggttctgatgatctctaccctgggcctggt 788

                                                                        
Query: 781  gcaggtttctaccctcacagtggtggtgcg---ggtggtagtatgcacgttggtccaaat 837
            ||||| |||||||||||||||||   || |   ||||| || ||||| |||||||| |||
Sbjct: 789  gcaggcttctaccctcacagtggcattgggagcggtggcagcatgcatgttggtcctaat 848

                                                                        
Query: 838  gatccacgcttcttcccttcaaatccttttcctgctccttttggtggccctgggagtgtt 897
            ||||| |||||||| ||||| ||||| ||  |||| || |||||||| | ||||||||||
Sbjct: 849  gatccgcgcttctttccttctaatcccttctctgccccatttggtgggcttgggagtgtt 908

                                                                        
Query: 898  ccacctggtggccgttacgatccaattggcccgcccgatgttccaggatttgaaccatct 957
            ||||| ||| | || || |||||||||||||| || || || ||||| ||||| ||||||
Sbjct: 909  ccaccaggtagtcgctatgatccaattggcccacctgacgtcccagggtttgagccatct 968

                                                                        
Query: 958  cgctttgtaaggcgttc---gaggcatccaggtggaagcactcacccagacctcgagttc 1014
             ||||||| |||||| |   | ||| |||||| || ||||| ||||| ||||||||||||
Sbjct: 969  agctttgttaggcgtccaaggcggcctccaggcgggagcacccaccccgacctcgagttc 1028

                                      
Query: 1015 ttccagcaaggcccagacttctgaga 1040
            ||||||||||||||||||||||||||
Sbjct: 1029 ttccagcaaggcccagacttctgaga 1054

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>gb|DQ244335.1| Zea mays clone 5083 mRNA sequence
          Length = 712

 Score =  163 bits (82), Expect = 2e-36
 Identities = 211/254 (83%)
 Strand = Plus / Plus

                                                                       
Query: 157 acgatggtgactgacgcggccgcgttggcggtcgtgaaggccgcgcgccccgtcttccgc 216
           ||||||||||  ||||| || ||| |||| ||||||| ||| |||||||| | | |||| 
Sbjct: 81  acgatggtgaacgacgccgcggcgatggccgtcgtgagggcggcgcgcccagccctccgt 140

                                                                       
Query: 217 ggcgcccacgatggcgtcgcgtttgccacaaacgccgcgttcctcgccgctggatactct 276
           |||||||||||||||||||| || ||| |  ||||||| |||||||||| ||| ||||| 
Sbjct: 141 ggcgcccacgatggcgtcgccttcgccgcccacgccgccttcctcgccgatgggtactcg 200

                                                                       
Query: 277 ctctgcgccgttggtcctgccgcgcttaccgaccccctgcccgcagttgacgatgaggtg 336
           ||||||||||| || |||||||||||  ||||||||  ||||  || ||| || ||||||
Sbjct: 201 ctctgcgccgtcggccctgccgcgctcgccgacccctcgcccttaggtgatgaggaggtg 260

                                                                       
Query: 337 ggaattgatgggtggaacagtatggataattgctatgcctttttgtactccaaggaggag 396
           || |||||||| |||||||  ||||| ||||| || |||||||||||   ||||||||||
Sbjct: 261 gggattgatggttggaacatcatggagaattgttacgcctttttgtatagcaaggaggag 320

                         
Query: 397 gagggcaagaagaa 410
            |||||||||||||
Sbjct: 321 aagggcaagaagaa 334

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  153 bits (77), Expect = 2e-33
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                            
Query: 158      cgatggtgactgacgcggccgcgttggcggtcgtgaaggccgcgcgccccgtcttccgcg 217
                |||||||||| ||||| |||||| |||| ||||||||||| |||||||| | ||||||||
Sbjct: 21740183 cgatggtgaccgacgccgccgcgatggccgtcgtgaaggcggcgcgcccggccttccgcg 21740124

                                                                            
Query: 218      gcgcccacgatggcgtcgcgtttgccacaaacgccgcgttcctcgccgctggatactctc 277
                |||||||||| || ||||| || ||| | |||||||||||||||||||| || ||||| |
Sbjct: 21740123 gcgcccacgacggggtcgccttcgccgccaacgccgcgttcctcgccgccggctactccc 21740064

                                                         
Query: 278      tctgcgccgttggtcctgccgcgcttaccgaccccctgccc 318
                |||||||||| || || |||||||| |||||||||| ||||
Sbjct: 21740063 tctgcgccgtcggccccgccgcgctcaccgaccccccgccc 21740023



 Score =  105 bits (53), Expect = 4e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                            
Query: 331      gaggtgggaattgatgggtggaacagtatggataattgctatgcctttttgtactccaag 390
                |||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||  ||||
Sbjct: 21738889 gaggtggggattgatggttggaacagcatggataattgttatgcatttttgtacatcaag 21738830

                                                                            
Query: 391      gaggaggagggcaagaagaagcgcattttagtgaaatgtctagtgattgatgacttcctt 450
                ||||||  |||||||||||| ||  | || || |||||||| ||||| | |||  |||||
Sbjct: 21738829 gaggagaggggcaagaagaaacgggtattggtaaaatgtctggtgatcggtgatgtcctt 21738770

                                             
Query: 451      gctattgatgcgctggatcttgaggcaca 479
                || |||||||  |||||||||||| ||||
Sbjct: 21738769 gccattgatgtcctggatcttgagtcaca 21738741



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 890      ggagtgttccacctggtggccgttacgatccaattggcccgcccgatgttccaggatttg 949
                ||||||||||||| ||||| ||||| ||||||||||| || || ||||||||||||||||
Sbjct: 21735797 ggagtgttccaccaggtggtcgttatgatccaattggtccaccagatgttccaggatttg 21735738

                                
Query: 950      aaccatctcgctttgt 965
                |||| |||||||||||
Sbjct: 21735737 aaccttctcgctttgt 21735722



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 829      ggtccaaatgatccacgcttcttcccttcaaatccttttcctgctccttttggtggccct 888
                |||||||| |||||||||||||| ||||| ||||| || ||||  || ||||||||||||
Sbjct: 21735946 ggtccaaacgatccacgcttctttccttctaatcccttccctgtgccctttggtggccct 21735887

                   
Query: 889      ggg 891
                |||
Sbjct: 21735886 ggg 21735884



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 728      tttatcctccagtagctccgtttggtcatgatgacaccttccctgctcctggtgcaggtt 787
                ||||||||||| |||||||  |||||||||||||  |||||||||  ||||| ||||| |
Sbjct: 21736216 tttatcctccaatagctccacttggtcatgatgatgccttccctggccctggcgcaggct 21736157

                          
Query: 788      tctaccctca 797
                |||| |||||
Sbjct: 21736156 tctatcctca 21736147



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 967      aggcgttcgaggcatccaggtggaagcactcacccagacctcgagttcttccagc 1021
                |||||| |||||| ||||| ||| |  |||||||||||||| |||||||||||||
Sbjct: 21735360 aggcgtccgaggcctccagctgggactactcacccagaccttgagttcttccagc 21735306

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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  153 bits (77), Expect = 2e-33
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                         
Query: 158   cgatggtgactgacgcggccgcgttggcggtcgtgaaggccgcgcgccccgtcttccgcg 217
             |||||||||| ||||| |||||| |||| ||||||||||| |||||||| | ||||||||
Sbjct: 57366 cgatggtgaccgacgccgccgcgatggccgtcgtgaaggcggcgcgcccggccttccgcg 57307

                                                                         
Query: 218   gcgcccacgatggcgtcgcgtttgccacaaacgccgcgttcctcgccgctggatactctc 277
             |||||||||| || ||||| || ||| | |||||||||||||||||||| || ||||| |
Sbjct: 57306 gcgcccacgacggggtcgccttcgccgccaacgccgcgttcctcgccgccggctactccc 57247

                                                      
Query: 278   tctgcgccgttggtcctgccgcgcttaccgaccccctgccc 318
             |||||||||| || || |||||||| |||||||||| ||||
Sbjct: 57246 tctgcgccgtcggccccgccgcgctcaccgaccccccgccc 57206



 Score =  105 bits (53), Expect = 4e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                         
Query: 331   gaggtgggaattgatgggtggaacagtatggataattgctatgcctttttgtactccaag 390
             |||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||  ||||
Sbjct: 56072 gaggtggggattgatggttggaacagcatggataattgttatgcatttttgtacatcaag 56013

                                                                         
Query: 391   gaggaggagggcaagaagaagcgcattttagtgaaatgtctagtgattgatgacttcctt 450
             ||||||  |||||||||||| ||  | || || |||||||| ||||| | |||  |||||
Sbjct: 56012 gaggagaggggcaagaagaaacgggtattggtaaaatgtctggtgatcggtgatgtcctt 55953

                                          
Query: 451   gctattgatgcgctggatcttgaggcaca 479
             || |||||||  |||||||||||| ||||
Sbjct: 55952 gccattgatgtcctggatcttgagtcaca 55924



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 890   ggagtgttccacctggtggccgttacgatccaattggcccgcccgatgttccaggatttg 949
             ||||||||||||| ||||| ||||| ||||||||||| || || ||||||||||||||||
Sbjct: 52980 ggagtgttccaccaggtggtcgttatgatccaattggtccaccagatgttccaggatttg 52921

                             
Query: 950   aaccatctcgctttgt 965
             |||| |||||||||||
Sbjct: 52920 aaccttctcgctttgt 52905



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 829   ggtccaaatgatccacgcttcttcccttcaaatccttttcctgctccttttggtggccct 888
             |||||||| |||||||||||||| ||||| ||||| || ||||  || ||||||||||||
Sbjct: 53129 ggtccaaacgatccacgcttctttccttctaatcccttccctgtgccctttggtggccct 53070

                
Query: 889   ggg 891
             |||
Sbjct: 53069 ggg 53067



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 728   tttatcctccagtagctccgtttggtcatgatgacaccttccctgctcctggtgcaggtt 787
             ||||||||||| |||||||  |||||||||||||  |||||||||  ||||| ||||| |
Sbjct: 53399 tttatcctccaatagctccacttggtcatgatgatgccttccctggccctggcgcaggct 53340

                       
Query: 788   tctaccctca 797
             |||| |||||
Sbjct: 53339 tctatcctca 53330



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 967   aggcgttcgaggcatccaggtggaagcactcacccagacctcgagttcttccagc 1021
             |||||| |||||| ||||| ||| |  |||||||||||||| |||||||||||||
Sbjct: 52543 aggcgtccgaggcctccagctgggactactcacccagaccttgagttcttccagc 52489

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>gb|AC125100.4| Mus musculus BAC clone RP24-206N14 from 9, complete sequence
          Length = 169501

 Score = 48.1 bits (24), Expect = 0.077
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 388    aaggaggaggagggcaagaagaag 411
              ||||||||||||||||||||||||
Sbjct: 127394 aaggaggaggagggcaagaagaag 127417

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>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome
          Length = 5505494

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 936     tgttccaggatttgaaccatctc 958
               |||||||||||||||||||||||
Sbjct: 5408398 tgttccaggatttgaaccatctc 5408420

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>gb|BT014256.1| Lycopersicon esculentum clone 133458F, mRNA sequence
          Length = 1088

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 893 gtgttccacctggtggccgttacgatccaattggcccgcccgatgttccaggatttgaac 952
           ||||||||||||||| |||||  ||||||  ||| || || |||||||| || |||||||
Sbjct: 791 gtgttccacctggtgcccgttttgatccatatggtccaccagatgttcctggctttgaac 850

                      
Query: 953 catctcgcttt 963
           ||  |||||||
Sbjct: 851 caggtcgcttt 861

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>gb|AF401574.1| Ictalurus punctatus ribosomal protein L19 mRNA, complete cds
          Length = 640

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 385 tccaaggaggaggagggcaagaa 407
           |||||||||||||||||||||||
Sbjct: 575 tccaaggaggaggagggcaagaa 597

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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 216     cggcgcccacgatggcgtcgcg 237
               ||||||||||||||||||||||
Sbjct: 2885459 cggcgcccacgatggcgtcgcg 2885480

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>emb|AL935029.6| Zebrafish DNA sequence from clone CH211-168J20 in linkage group 1,
             complete sequence
          Length = 157435

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 579   cattaatacccttaactcaagc 600
             ||||||||||||||||||||||
Sbjct: 50649 cattaatacccttaactcaagc 50628

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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 170     acgcggccgcgttggcggtcgtgaaggccg 199
               ||||||||||||||||| |||||| |||||
Sbjct: 1025259 acgcggccgcgttggcgatcgtgatggccg 1025230

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>emb|CT832999.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051P18, full
           insert sequence
          Length = 790

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  ccgacgacgcctccgccaccg 115
           |||||||||||||||||||||
Sbjct: 215 ccgacgacgcctccgccaccg 195

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>emb|CR855164.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete
             sequence
          Length = 111824

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ccgacgacgcctccgccaccg 115
             |||||||||||||||||||||
Sbjct: 50545 ccgacgacgcctccgccaccg 50525

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>gb|CP000416.1| Lactobacillus brevis ATCC 367, complete genome
          Length = 2291220

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1161    cttctgtgttcaccttccaga 1181
               |||||||||||||||||||||
Sbjct: 1821782 cttctgtgttcaccttccaga 1821802

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>ref|NM_001065141.1| Oryza sativa (japonica cultivar-group) Os06g0721600 (Os06g0721600)
            mRNA, complete cds
          Length = 3384

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 831  tccaaatgatccacgcttcttcccttcaaatcc 863
            ||||||||||||| ||||||| ||||| |||||
Sbjct: 3204 tccaaatgatccaagcttctttccttctaatcc 3236

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>ref|NM_001059503.1| Oryza sativa (japonica cultivar-group) Os04g0456700 (Os04g0456700)
           mRNA, complete cds
          Length = 894

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  ccgacgacgcctccgccaccg 115
           |||||||||||||||||||||
Sbjct: 215 ccgacgacgcctccgccaccg 195

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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ccgacgacgcctccgccaccg 115
             |||||||||||||||||||||
Sbjct: 15076 ccgacgacgcctccgccaccg 15056

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>gb|AC115940.11| Mus musculus chromosome 5, clone RP24-553D12, complete sequence
          Length = 189685

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    aggcatttctgcagaaacctc 46
             |||||||||||||||||||||
Sbjct: 62020 aggcatttctgcagaaacctc 62040

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>gb|AC127275.4| Mus musculus BAC clone RP24-207I8 from chromosome 5, complete sequence
          Length = 180919

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     aggcatttctgcagaaacctc 46
              |||||||||||||||||||||
Sbjct: 136952 aggcatttctgcagaaacctc 136972

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>gb|AC145968.3| Pan troglodytes BAC clone RP43-12H15 from 7, complete sequence
          Length = 192898

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 614   tggatggtaaggatgctgctgctgc 638
             |||||||| ||||||||||||||||
Sbjct: 71154 tggatggtgaggatgctgctgctgc 71130

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>gb|AC073330.6| Homo sapiens BAC clone RP11-409J21 from 7, complete sequence
          Length = 155704

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 614   tggatggtaaggatgctgctgctgc 638
             |||||||| ||||||||||||||||
Sbjct: 98159 tggatggtgaggatgctgctgctgc 98135

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>gb|AC092999.3| Homo sapiens 3 BAC RP11-170K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167084

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1031  acttctgagactcagcttcat 1051
             |||||||||||||||||||||
Sbjct: 78247 acttctgagactcagcttcat 78227

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>ref|XM_744046.1| Aspergillus fumigatus Af293 G-patch RNA maturation protein
           (Afu7g03690) partial mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 390 ggaggaggagggcaagaagaa 410
           |||||||||||||||||||||
Sbjct: 570 ggaggaggagggcaagaagaa 590

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>gb|AC093830.3| Homo sapiens BAC clone RP11-401G24 from 4, complete sequence
          Length = 153887

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1174  cttccagacaatgctttgtaa 1194
             |||||||||||||||||||||
Sbjct: 27191 cttccagacaatgctttgtaa 27171

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 831      tccaaatgatccacgcttcttcccttcaaatcc 863
                ||||||||||||| ||||||| ||||| |||||
Sbjct: 30033696 tccaaatgatccaagcttctttccttctaatcc 30033728



 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 831      tccaaatgatccacgcttcttcccttcaaatcc 863
                ||||||||||||| ||||||| ||||| |||||
Sbjct: 30129854 tccaaatgatccaagcttctttccttctaatcc 30129822



 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 831      tccaaatgatccacgcttcttcccttcaaatcc 863
                ||||||||||||| ||||||| ||||| |||||
Sbjct: 30210024 tccaaatgatccaagcttctttccttctaatcc 30209992

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 95       ccgacgacgcctccgccaccg 115
                |||||||||||||||||||||
Sbjct: 22804273 ccgacgacgcctccgccaccg 22804253

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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
              sequence
          Length = 143507

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 831    tccaaatgatccacgcttcttcccttcaaatcc 863
              ||||||||||||| ||||||| ||||| |||||
Sbjct: 114393 tccaaatgatccaagcttctttccttctaatcc 114425

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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 618    tggtaaggatgctgctgctgc 638
              |||||||||||||||||||||
Sbjct: 534067 tggtaaggatgctgctgctgc 534047

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>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
              complete sequence
          Length = 143109

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     ccgacgacgcctccgccaccg 115
              |||||||||||||||||||||
Sbjct: 141469 ccgacgacgcctccgccaccg 141449

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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ccgacgacgcctccgccaccg 115
             |||||||||||||||||||||
Sbjct: 13048 ccgacgacgcctccgccaccg 13028

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>gb|AC010984.7| Homo sapiens BAC clone RP11-510C1 from 2, complete sequence
          Length = 191540

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 562  aagaattttgcgggcttcatt 582
            |||||||||||||||||||||
Sbjct: 8148 aagaattttgcgggcttcatt 8168

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>gb|AC132479.2| Homo sapiens BAC clone RP11-769N11 from 2, complete sequence
          Length = 168824

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   aagaattttgcgggcttcatt 582
             |||||||||||||||||||||
Sbjct: 98836 aagaattttgcgggcttcatt 98816

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>gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, complete sequence
          Length = 219471

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   aagaattttgcgggcttcatt 582
             |||||||||||||||||||||
Sbjct: 91989 aagaattttgcgggcttcatt 91969

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>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0535F09
          Length = 175050

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 831   tccaaatgatccacgcttcttcccttcaaatcc 863
             ||||||||||||| ||||||| ||||| |||||
Sbjct: 76359 tccaaatgatccaagcttctttccttctaatcc 76327

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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541C02
          Length = 150660

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 831    tccaaatgatccacgcttcttcccttcaaatcc 863
              ||||||||||||| ||||||| ||||| |||||
Sbjct: 109844 tccaaatgatccaagcttctttccttctaatcc 109876

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>dbj|AP006065.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0076I16
          Length = 151711

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 831   tccaaatgatccacgcttcttcccttcaaatcc 863
             ||||||||||||| ||||||| ||||| |||||
Sbjct: 25678 tccaaatgatccaagcttctttccttctaatcc 25710



 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 831    tccaaatgatccacgcttcttcccttcaaatcc 863
              ||||||||||||| ||||||| ||||| |||||
Sbjct: 121836 tccaaatgatccaagcttctttccttctaatcc 121804

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>gb|AC092602.2| Homo sapiens BAC clone RP11-134G21 from 2, complete sequence
          Length = 166299

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    aagaattttgcgggcttcatt 582
              |||||||||||||||||||||
Sbjct: 101043 aagaattttgcgggcttcatt 101023

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>gb|AC011994.10| Homo sapiens BAC clone RP11-50E1 from 2, complete sequence
          Length = 176933

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 841   ccacgcttcttcccttcaaat 861
             |||||||||||||||||||||
Sbjct: 22705 ccacgcttcttcccttcaaat 22685

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>dbj|AK065178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D12, full
           insert sequence
          Length = 895

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  ccgacgacgcctccgccaccg 115
           |||||||||||||||||||||
Sbjct: 216 ccgacgacgcctccgccaccg 196

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>ref|XM_447949.1| Candida glabrata CBS138, CAGL0J05610g partial mRNA
          Length = 4221

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 618  tggtaaggatgctgctgctgc 638
            |||||||||||||||||||||
Sbjct: 2313 tggtaaggatgctgctgctgc 2333

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>emb|BX248325.7| Zebrafish DNA sequence from clone CH211-233I11 in linkage group 9,
              complete sequence
          Length = 157207

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 627    tgctgctgctgcccagaagcc 647
              |||||||||||||||||||||
Sbjct: 155211 tgctgctgctgcccagaagcc 155191

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>dbj|D12936.1|LILNORENV Louping ill virus gene for envelope glycoprotein, partial sequence
          Length = 1488

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 479  aacacaaggaaccctgcaatgtcca 503
            ||||||||||||||| |||||||||
Sbjct: 1408 aacacaaggaaccctacaatgtcca 1432

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>dbj|AB010644.1| Candida glabrata Top2 gene for TopoisomeraseII, complete cds
          Length = 4821

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 618  tggtaaggatgctgctgctgc 638
            |||||||||||||||||||||
Sbjct: 2663 tggtaaggatgctgctgctgc 2683


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 211,697,301
Number of extensions: 12247268
Number of successful extensions: 251327
Number of sequences better than 10.0: 46
Number of HSP's gapped: 251323
Number of HSP's successfully gapped: 66
Length of query: 1248
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1225
Effective length of database: 18,503,978,556
Effective search space: 22667373731100
Effective search space used: 22667373731100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result