ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf141j02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK062626:Os02g0651000 327 9e-90
2Os04g0481600:Os04g0481600 31 1.8
3Os05g0367800:Os05g0367800 30 3.1
4Os02g0784100:Os02g0784100 29 6.8
5AK067177:Os04g0223000 29 6.8

>AK062626:Os02g0651000 |
          Length = 188
 Score =  327 bits (838), Expect = 9e-90
 Identities = 158/188 (84%), Positives = 170/188 (90%)
 Frame = +2

Query: 440  MRRVASLVPDLYAVDADYALSELCKDEQKLEKVLLGREFHVSLGRTVGIQVHQIDSLVAM 619
            MRR AS VPDLYA+DADYALSELCKDEQKLEKVLL REFHVSLGRTV IQVHQI+SLVAM
Sbjct: 1    MRRAASFVPDLYAIDADYALSELCKDEQKLEKVLLSREFHVSLGRTVAIQVHQIESLVAM 60

Query: 620  LRQKFQSQQRYWMDLNKWEHFVNDDSTRSFLSLEVTRTGLPEISKQIHMVDEVYRLHGLP 799
            LRQKF+SQQRYWMD NKWEHFVNDD TRSFLSLEVT TGLPEISKQI MVD+VYRLHGLP
Sbjct: 61   LRQKFRSQQRYWMDFNKWEHFVNDDCTRSFLSLEVTSTGLPEISKQITMVDDVYRLHGLP 120

Query: 800  EFYKNPRPHISLAWALGDVSSKLKQATKEIEKFENSINLSKNYNLRCNFSRILCKVGKKV 979
            EFYKNPRPHISLAWALGDVS KLKQA KEIEK ++S+  S+  NLRC FS ++CK+GKKV
Sbjct: 121  EFYKNPRPHISLAWALGDVSCKLKQAIKEIEKSQSSLGTSQISNLRCKFSHVVCKIGKKV 180

Query: 980  YDICKIGD 1003
            YDICK+ D
Sbjct: 181  YDICKLAD 188



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>Os04g0481600:Os04g0481600 |
          Length = 501

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 132 AESLSRPSSW--MRRAARAMCLATGGGPAVLGEGTENKQGS 16
           ++ + RP  W  + R    +C+ATG   A  GEG  +  GS
Sbjct: 19  SDDVDRPGWWCLLMRLLPRLCMATGDSAAAAGEGDSSNSGS 59



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>Os05g0367800:Os05g0367800 |
          Length = 669

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 69  TGGGPAVLGEGTENKQGSGPGRT 1
           TGGG  ++GE  +N+  + PGRT
Sbjct: 80  TGGGERLIGEAAKNQAAANPGRT 102



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>Os02g0784100:Os02g0784100 |
          Length = 1970

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
 Frame = +2

Query: 602  DSLVAMLRQKFQSQQRYWMDLNKWEHFVNDDSTRSFLSLEVTRTGLPEISKQIHMVDEVY 781
            DSL+  LR+ F + +RY + LN  E       +   LS  V+  G+    ++I  ++ + 
Sbjct: 1288 DSLIDDLRETFDNLRRYRLMLNP-EKCTFGVPSGKLLSFLVSSRGIEANPEKIKAIENMK 1346

Query: 782  RLHGLPEFYKNPRPHISLAWALGDVSSKLKQ------ATKEIEKFENSINLSKNYN 931
                L E  K       L   +  +S K K+      AT +I  + +  NL KNY+
Sbjct: 1347 SPTRLKEVQK-------LTGCMAALSRKPKRHLLHSNATYQIPLYSSLPNLMKNYS 1395



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>AK067177:Os04g0223000 |
          Length = 601

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = +2

Query: 608 LVAMLRQKFQSQQRYWMDLNKWEHFVNDDSTRSFLSLEVTRTGLPEISKQIHMVDEVYRL 787
           +V +LRQK  S Q+ + ++       N  S             LPEI++ +H+   +   
Sbjct: 299 VVQVLRQKATSIQQDYAEVKS----TNTQSVSELKDFVKRLHSLPEIARHVHLAQHLQSF 354

Query: 788 HGLPEFY 808
            G P F+
Sbjct: 355 TGKPSFH 361


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 28,970,881
Number of extensions: 644862
Number of successful extensions: 2027
Number of sequences better than 10.0: 5
Number of HSP's gapped: 2024
Number of HSP's successfully gapped: 5
Length of query: 369
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 267
Effective length of database: 11,315,673
Effective search space: 3021284691
Effective search space used: 3021284691
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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