| Clone Name | FLbaf141i24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101084:Os01g0266500 | 429 | e-120 | 2 | Os03g0434400:Os03g0434400 | 322 | 4e-88 | 3 | Os11g0233800:Os11g0233800 | 33 | 0.42 | 4 | Os12g0511100:Os12g0511100 | 31 | 1.6 | 5 | AY224535:Os10g0546300 | 31 | 2.1 | 6 | AK103033:Os10g0546300 | 31 | 2.1 | 7 | Os12g0117800:Os12g0117800 | 30 | 2.7 | 8 | Os10g0489500:Os10g0489500 | 30 | 4.6 | 9 | AK063689:Os02g0259900 | 30 | 4.6 | 10 | Os12g0546000:Os12g0546000 | 29 | 7.8 | 11 | Os12g0130200:Os12g0130200 | 29 | 7.8 | 12 | AK110228: | 29 | 7.8 | 13 | AK111639:Os08g0520500 | 29 | 7.8 |
|---|
>AK101084:Os01g0266500 | Length = 309 Score = 429 bits (1103), Expect = e-120 Identities = 229/311 (73%), Positives = 254/311 (81%), Gaps = 14/311 (4%) Frame = +2 Query: 119 MGKRAIRYAVVDAFAAEPFKGNPAAVCLLEEEGASAAVDDRWMQSVAAEFNLSDTAFLAR 298 M K AI+YAVVDAFAAEPFKGNPAAVCLLE E A+AA D+RWMQSVAAEFNLS+TAFL R Sbjct: 1 MVKNAIQYAVVDAFAAEPFKGNPAAVCLLEGEDAAAAADERWMQSVAAEFNLSETAFLIR 60 Query: 299 D---SSGAAGAAPRFHLRWFTPVTEVDLCGHATLASAHFLFTTVLPEH-----GKLEFTT 454 D S+ AA AAPRF LRWFTPV EV+LCGHATLASAHFLFTTVL + +EF T Sbjct: 61 DPSSSAAAADAAPRFRLRWFTPVAEVNLCGHATLASAHFLFTTVLAKQQHAAAAMVEFVT 120 Query: 455 RSGTLTAKTVPAP----GNTGVPGDKQGKLFIELDFPMIGFL--DCSEMPLIPETLNGAP 616 RSG LTAK VPAP + GVPG++ KLFIELDFPMI + D +E IPETLNGA Sbjct: 121 RSGILTAKKVPAPPPPANDGGVPGEE--KLFIELDFPMIDLVEYDSAETLSIPETLNGAR 178 Query: 617 IVSVHKSATDGDLIVELSSGKEVVDILPSIDEIRNLACRGLIVTGPAPAGSGYDFFTRFF 796 +VSV KS+T GDLIVELSSGKEV DI+P+I+EI+ RG+IVTGPAPAGS YDFF+RFF Sbjct: 179 VVSVWKSSTAGDLIVELSSGKEVADIIPNINEIKKCDGRGVIVTGPAPAGSDYDFFSRFF 238 Query: 797 CPKFGIDEDPVTGSIHCVLAPYWGRKLGKQKLTAFQASPRGGTLYLQLDDANQRVQIQGE 976 CPKFGIDEDPV GS HCVLAPYWG KLGKQKLTAFQASPR GTLYL+LD N+RV+IQGE Sbjct: 239 CPKFGIDEDPVCGSAHCVLAPYWGGKLGKQKLTAFQASPRSGTLYLELDGENRRVRIQGE 298 Query: 977 ALTVMDGTLLA 1009 A+TVM GTLLA Sbjct: 299 AVTVMAGTLLA 309
>Os03g0434400:Os03g0434400 | Length = 327 Score = 322 bits (824), Expect = 4e-88 Identities = 177/329 (53%), Positives = 221/329 (67%), Gaps = 33/329 (10%) Frame = +2 Query: 119 MGKRAIRYAVVDAFAAEPFKGNPAAVCLLEEEGASAAVDDRWMQSVAAEFNLSDTAFLAR 298 M +RAI YAVVDAF EPFKGN AAVCLLEE +D++WMQSVAAEFN S TAFL R Sbjct: 1 MPERAITYAVVDAFTDEPFKGNTAAVCLLEESWEEQ-LDEQWMQSVAAEFNTSITAFLVR 59 Query: 299 DSSGAAGAAPRFHLRWFTPVTEVDLCGHATLASAHFLFTTVLPEHGKLEFTTRSGTLTAK 478 + AA P+FH+RWFTPV E +LCGH TLA+AH+L ++ L + ++F +SG LTAK Sbjct: 60 ADADAAN--PQFHIRWFTPVRESELCGHGTLAAAHYLISSGLVKCNAIDFLAKSGFLTAK 117 Query: 479 TVPA--PGNTGVPGDKQG--KLFIELDFPMIGFLDCS--EMPLIPETLNGAPIVSVHKSA 640 V +T + ++ K IELDFP+I + CS EMP IPETLNGA + +V K+ Sbjct: 118 KVVGLKQSSTLISPLQEACTKFLIELDFPLIPVVKCSPLEMPSIPETLNGASVSNVLKTV 177 Query: 641 TDG---------------------------DLIVELSSGKEVVDILPSIDEIRNLACRGL 739 +D IVEL+S +EVV++ P+I E+ A RG+ Sbjct: 178 SDSATDLIVISLTYILSVEMQPVTLKFSCVSFIVELNSSEEVVNVRPNISELVQSAGRGV 237 Query: 740 IVTGPAPAGSGYDFFTRFFCPKFGIDEDPVTGSIHCVLAPYWGRKLGKQKLTAFQASPRG 919 VTGPAP GS YDFF+RFFCPK+G++EDPV GS+HC LAPYWG+KLGKQ +TA ASPR Sbjct: 238 AVTGPAPVGSSYDFFSRFFCPKYGLNEDPVCGSVHCALAPYWGKKLGKQCMTASMASPRS 297 Query: 920 GTLYLQLDDANQRVQIQGEALTVMDGTLL 1006 GTLYLQ D+A QRVQI+GEA+TVM G +L Sbjct: 298 GTLYLQWDEAAQRVQIRGEAVTVMVGNIL 326
>Os11g0233800:Os11g0233800 | Length = 1061 Score = 33.1 bits (74), Expect = 0.42 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Frame = +2 Query: 605 NGAPIVSVHKSATDGDLIVELSSGKEVVDIL-PSIDEIRNLACRGLIVTGPAPAGSGYDF 781 + AP+V+ + A GD + L+ G V ++ + +R +CRG G P G G Sbjct: 654 SSAPVVTTRQRAAGGDFKLVLALGLLVCSVVFAAAAVLRARSCRG----GGGPDGGGAWR 709 Query: 782 FTRFFCPKFGIDE 820 FT F FGI E Sbjct: 710 FTAFHKVDFGIAE 722
>Os12g0511100:Os12g0511100 | Length = 314 Score = 31.2 bits (69), Expect = 1.6 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Frame = -3 Query: 609 PFRVSGINGISLQSRKPIMGKSSSINSFPCLSPGTPVFPGAGTVLAVRVPDLVVNSSLPC 430 P + + +++ ++G + +S P L+P P PGA V + V L +SL C Sbjct: 18 PLERPRLRRLGIRNPHEVLGLHCTASSPPLLTPPLPPRPGAPPVSEMHVHHLRRGASLHC 77 Query: 429 SGRTVV--KRKCA-EANVAWPQRSTSVTGVNH 343 VV +R+C NV P + V H Sbjct: 78 GLVVVVPGRRRCGLHHNVVVPDEIDAYRHVPH 109
>AY224535:Os10g0546300 | Length = 370 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Frame = +2 Query: 602 LNGAPIVSVHKSATDGDLIVELSSGKE--VVDILPSIDEIRN 721 +NG VS K+ DL+V + S K+ ++D+LP + E+RN Sbjct: 213 MNGRRHVSSSKNEVSRDLVVNVKSKKKQALLDVLPILTELRN 254
>AK103033:Os10g0546300 | Length = 1074 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Frame = +2 Query: 602 LNGAPIVSVHKSATDGDLIVELSSGKE--VVDILPSIDEIRN 721 +NG VS K+ DL+V + S K+ ++D+LP + E+RN Sbjct: 213 MNGRRHVSSSKNEVSRDLVVNVKSKKKQALLDVLPILTELRN 254
>Os12g0117800:Os12g0117800 | Length = 465 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +3 Query: 117 KWAKGPSDTPWWMPSRLSRSRATPPRYASSKRRAPP 224 +W WW RS A PPR + ++R APP Sbjct: 323 RWPPPRCSPVWWGRRSRRRSCAAPPRRSRARRSAPP 358
>Os10g0489500:Os10g0489500 | Length = 652 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -1 Query: 1004 GAFHPSQLELLPGFALSDLRHPVAGIVFHPWEMLEMPSIFASPAF 870 G++ L PG A S+ + G++ WE L S F+ AF Sbjct: 443 GSYKELYLRENPGLAASEAEEHMRGMIAREWEKLNRESFFSGRAF 487
>AK063689:Os02g0259900 | Length = 426 Score = 29.6 bits (65), Expect = 4.6 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 7/127 (5%) Frame = -3 Query: 741 MRPLQAKFLISSMLGRISTTSFPEESSTMRSPSVADL*TLTMGAPFRVSGINGISLQSRK 562 M PL + L S + + E SSTM SP+ AD +TM A S + +S Sbjct: 1 MEPLHDEAL-SENSNELQQCTTSERSSTMISPAAADNSMITMAA---TSVESSVSADKVS 56 Query: 561 PIMG-------KSSSINSFPCLSPGTPVFPGAGTVLAVRVPDLVVNSSLPCSGRTVVKRK 403 P+ G + + + C P T + + ++++ +L + P SG +++ Sbjct: 57 PVEGQVTEAAVEHAPVEKDQCEEPNTTIVDSGDSSVSLKNEELQDHDQAP-SGSSIMSNS 115 Query: 402 CAEANVA 382 + A Sbjct: 116 AEQPEEA 122
>Os12g0546000:Os12g0546000 | Length = 274 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -3 Query: 246 IHRSSTAAEAPSSSRRHTAAGLPLNGSAAKASTTAYRMALLPISSNKAAAA 94 IHRS T + + H AA LP+ S+ ++ + ++ PI S A+AA Sbjct: 36 IHRSRTPIASSFNQPEHAAARLPVESSSPESPSHPPEVSDPPIGSPIASAA 86
>Os12g0130200:Os12g0130200 | Length = 729 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/44 (31%), Positives = 26/44 (59%) Frame = +2 Query: 587 LIPETLNGAPIVSVHKSATDGDLIVELSSGKEVVDILPSIDEIR 718 + PE ++G PI + + G +++EL SGK V D++ D+ + Sbjct: 609 IAPEWISGLPITAKVDVYSYGVVLLELVSGKRVFDLIIGEDKTK 652
>AK110228: | Length = 1551 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -3 Query: 237 SSTAAEAPSSSRRHTAAGLPLNGSAAKASTTAYRMALLPISSNKAAA 97 S+TAA A S S+ + GS ++ + +AL+P SS A A Sbjct: 634 SNTAAAAASRSKLFASGSSTAEGSGDESDAGSQALALVPASSTSAVA 680
>AK111639:Os08g0520500 | Length = 637 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = +2 Query: 353 PVTEVDLCGHATLASAHFLFTTVLPEHGKLEFTTRSGTLTAKTVPAPGNTGVPGDKQGKL 532 PV+ V C TL ++ P+ EF + TLTA G VP ++ Sbjct: 103 PVSNVTQCDKETLLASELALKQTRPQ---TEFFCK--TLTASDTSTHGGFSVPRRAAERI 157 Query: 533 FIELDFPM 556 F LDF M Sbjct: 158 FPRLDFSM 165 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,933,426 Number of extensions: 828480 Number of successful extensions: 2826 Number of sequences better than 10.0: 13 Number of HSP's gapped: 2814 Number of HSP's successfully gapped: 13 Length of query: 411 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 308 Effective length of database: 11,275,632 Effective search space: 3472894656 Effective search space used: 3472894656 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)