ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf144c03 |
|---|---|
| Clone Library Name | barley_pub |
>Q8LJT8:TKI1_ARATH TSL-kinase interacting protein 1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 743 Score = 464 bits (1194), Expect = e-130 Identities = 305/728 (41%), Positives = 407/728 (55%), Gaps = 17/728 (2%) Frame = +3 Query: 267 PAKKATRQWAAWTRQEEESFFNALRQVGKNFEKITLRVQGKNKDQVRHYYYRLVRRMKKL 446 PAKK TRQWAAWT QEEESFF ALRQVGKNFEKIT RVQ KNKDQVRHYYYRLVRRM KL Sbjct: 47 PAKKPTRQWAAWTHQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKL 106 Query: 447 LGPGFSLDARNSKDTIAAMLRWWSLLEKFSCSASKLHLKPRRFKTFVDALGNQLLXXXXX 626 LGP SLDA+N KDT AAMLRWWSLLEK+SC ASKLHLKPRRFK F++AL +QLL Sbjct: 107 LGPDLSLDAKNPKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKLFIEALEHQLLKDRRK 166 Query: 627 XXXXXPQGGTHLSSSS----PVLTKTPGNQSFAVQLLPVDAQNGNKGASSKGVFMKRVAE 794 G +LSS+S ++ G + +L+ D QN K G + E Sbjct: 167 SIRKRTCQGENLSSASLGNISSHSRERGLDNRPFKLILSDGQNVKK--LGPGRASTKHGE 224 Query: 795 PNCNKSGVIKGDLSATRTVRQKRRXXXXXXXXXYKKWERAAMAGVSLVADAAEELERNMV 974 G K D + R RQ+R+ Y+KWE+AA+ GVSLVADAAE LER + Sbjct: 225 SLSVNLGDEKEDTAFGRGGRQRRK-------QGYRKWEKAAIDGVSLVADAAEHLERTSI 277 Query: 975 TQNLSCNAD-ATTLASSPNNVSTVDDMGTNHMKEGDLQAPSKLKLQLFPINEATRKALEK 1151 +++ D T + + ++ G + + ++Q +KLKLQLFPI+E TR++LE Sbjct: 278 DKDMDDQTDLGPTRYLTGKSPLSLCSAGDVPLSDANMQFSAKLKLQLFPIDECTRRSLEM 337 Query: 1152 DDHNPHLELTLSSRKKMSSVLEHLTRKWGNSNIACGELVLFPYCAHQEDLATYQRWTTRD 1331 D HNPHLELTLS+RKK+SSVLEHL RKWG+S+ A GEL+LFPY A +E + +QRWT Sbjct: 338 DKHNPHLELTLSNRKKISSVLEHLNRKWGSSSCATGELLLFPYNARKETVTCHQRWTHDS 397 Query: 1332 TVAVADVFLSVNSPSIFRLRYGWFSLAELEAGLSEISLTRFENC-MIPEDVQV-RFSEAC 1505 ++ A+V V SPS+FRLRYGWF + +S++ + + C + +D+ V R +E Sbjct: 398 FLSAAEVHSMVGSPSVFRLRYGWFVHDASGSIISQVPTS--DPCPSLEDDMNVDRLNEVN 455 Query: 1506 VQKDGTLPSDFTSERSSTNSKDQSALLLGTPSITGKNA----EEEPYSNT-SPSQSVDHN 1670 + + P S T S + S L+ + + A + EP S + +P + + Sbjct: 456 MLLTESGPLSVHSTAEQTTSVEPSQGLVCASGVHDRPARSRDDYEPASTSITPLEHLSGG 515 Query: 1671 QEQVPANQAFEVDPQIDYLAIPELDWADTLTDISVGYLLTEASKAANLD--CEVTSIAKN 1844 Q P +WAD+LT+IS+G LL+E + D + + Sbjct: 516 NAQSPG------------------EWADSLTNISIGDLLSEVPDDIDSDGVDPPATEGSH 557 Query: 1845 ALFHENPCSCDSFDAAVALHASRYQ---AAEQPAHTSHSTIWGAEEACDEFSFMPATARK 2015 L + P + DSFDAA+A H R+Q +A+ P + S++W EE D FSF Sbjct: 558 YLLRDVPFTSDSFDAAIAAHILRHQNKPSAQLPLTSGSSSLWDDEETRDAFSFQKNRFAN 617 Query: 2016 QEGLNTSASSPPDSDNEVHSSNSEGFHGFLQDLAGGDTPGNPCADDAKAMEELCARSLPQ 2195 L + AS P V+ S+ L + + GD DD MEE + P Sbjct: 618 STELASVAS--PKGVGRVNGEPSQ-----LVEASSGDEGSYNPHDDGDPMEE--GPADPH 668 Query: 2196 SDNDFGLRDQPLDDIFWHDSLGPLDLDIPPIRSLADEFILGDSQNSWSRMMENSMDAFRN 2375 + + G L D++W DSLGPLDLDI + D+ IL +S SR++ S+DAF+N Sbjct: 669 TMDSPGKTPCGLADVYWPDSLGPLDLDIRSSK-YTDDLILSESLGGLSRLIATSLDAFQN 727 Query: 2376 MSFFASDN 2399 S F DN Sbjct: 728 CSLFGFDN 735
>Q6PG95:CRML_MOUSE Protein cramped-like - Mus musculus (Mouse)| Length = 1285 Score = 53.5 bits (127), Expect = 4e-06 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 14/104 (13%) Frame = +3 Query: 261 EKPAKKATRQWAAWTRQEEESFFNALRQVGKNFEKITLRV------------QGKNKDQV 404 ++ KK RQW +W+ +++ +FF L + GK+FE I + KNK+QV Sbjct: 150 KEEGKKVRRQWESWSTEDKNTFFEGLYEHGKDFEAIQNNIALKYKKKGKPASMVKNKEQV 209 Query: 405 RHYYYRLVRRMKKLL--GPGFSLDARNSKDTIAAMLRWWSLLEK 530 RH+YYR ++ K + FS + S + ++ + L +K Sbjct: 210 RHFYYRTWHKITKYIDFDNVFSRGLKKSSQELYGLICYGELRKK 253 Score = 33.5 bits (75), Expect = 4.8 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = +3 Query: 1080 LQAPSKLKLQLFPINEATRKALEKDDHNPHLELTLSSRKKMSSVLEHLTRKW 1235 ++ P K+ ++L P N ++ NP L + + +K+SS++E L +KW Sbjct: 312 VRLPLKVPVELQPRNNHAWARVQSLAQNPRLRMIVELHRKVSSLIEFLKQKW 363
>Q96RY5:CRML_HUMAN Protein cramped-like - Homo sapiens (Human)| Length = 1266 Score = 53.5 bits (127), Expect = 4e-06 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 14/104 (13%) Frame = +3 Query: 261 EKPAKKATRQWAAWTRQEEESFFNALRQVGKNFEKITLRV------------QGKNKDQV 404 ++ KK RQW +W+ +++ +FF L + GK+FE I + KNK+QV Sbjct: 150 KEEGKKVRRQWESWSTEDKNTFFEGLYEHGKDFEAIQNNIALKYKKKGKPASMVKNKEQV 209 Query: 405 RHYYYRLVRRMKKLL--GPGFSLDARNSKDTIAAMLRWWSLLEK 530 RH+YYR ++ K + FS + S + ++ + L +K Sbjct: 210 RHFYYRTWHKITKYIDFDHVFSRGLKKSSQELYGLICYGELRKK 253 Score = 33.9 bits (76), Expect = 3.7 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = +3 Query: 1080 LQAPSKLKLQLFPINEATRKALEKDDHNPHLELTLSSRKKMSSVLEHLTRKW 1235 ++ P K+ ++L P N ++ NP L + + +K+SS++E L +KW Sbjct: 312 VRLPLKVPIELQPRNNHAWARVQSLAQNPRLRMIVELHRKVSSLIEFLKQKW 363
>Q8MX88:CRM_DROSE Protein cramped - Drosophila sechellia (Fruit fly)| Length = 975 Score = 43.5 bits (101), Expect = 0.005 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 19/150 (12%) Frame = +3 Query: 171 MEKEVCEEMSPPPQXXXXXXXXXXXXXXXXEKPAKKATRQW------AAWTRQEEESFFN 332 M+++ M+PPP EK A+K Q WT E FF+ Sbjct: 73 MKQDQTRPMTPPPSEREPNKKE--------EKAAQKTPSQLKTGSGKTTWTNVERNCFFD 124 Query: 333 ALRQVGKNFEKITLRVQG-------------KNKDQVRHYYYRLVRRMKKLLGPGFSLDA 473 AL + GK+FE + + K KDQVR +YY+ ++ K + FS + Sbjct: 125 ALNEFGKDFEAVANCINAKLKRRNANSDYSFKTKDQVRQHYYQTYHKICKYV--RFSEEL 182 Query: 474 RNSKDTIAAMLRWWSLLEKFSCSASKLHLK 563 + + ++ + + K K +K Sbjct: 183 KKPAQELYTLINYGEMRRKLQFLTEKHFMK 212
>O76906:CRM_DROME Protein cramped - Drosophila melanogaster (Fruit fly)| Length = 982 Score = 42.7 bits (99), Expect = 0.008 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 19/150 (12%) Frame = +3 Query: 171 MEKEVCEEMSPPPQXXXXXXXXXXXXXXXXEKPAKKATRQW------AAWTRQEEESFFN 332 M+++ M+PPP EK A+K Q WT E FF+ Sbjct: 73 MKQDQTRPMTPPPSEREPNKKE--------EKAAQKTPSQLKTGSGKTTWTNVERNCFFD 124 Query: 333 ALRQVGKNFEKITLRVQG-------------KNKDQVRHYYYRLVRRMKKLLGPGFSLDA 473 AL + GK+FE + + K KDQVR +YY+ ++ K + FS + Sbjct: 125 ALNEFGKDFEAVANCINAKLKRRNANSDYSFKTKDQVRQHYYQTHHKICKYV--RFSEEL 182 Query: 474 RNSKDTIAAMLRWWSLLEKFSCSASKLHLK 563 + + ++ + + K K +K Sbjct: 183 KKPAQELYTLINYGEMRRKLQFLTEKHFMK 212
>Q8IWB6:TEX14_HUMAN Testis-expressed protein 14 - Homo sapiens (Human)| Length = 1497 Score = 40.8 bits (94), Expect = 0.030 Identities = 57/257 (22%), Positives = 96/257 (37%), Gaps = 5/257 (1%) Frame = +3 Query: 1602 ITGKNAEEEPYSNTSPSQSVDHNQEQVPANQAFEVDPQIDYLAIPELDWADTLTDISVGY 1781 I GKNAE P S P +S + QE+ E+ + ++ D S+ Y Sbjct: 1135 ILGKNAEILPRSQFQPVRSTEDEQEETSKESPKELKEK-------DISLTDIQDLSSISY 1187 Query: 1782 LLTEASKAANLDCEVTSIAKNALFHENPCSCDSFDAAVALHASRYQAAEQPAHTSHSTIW 1961 + K A+ C+ I P S S +A + + ++ T ++ W Sbjct: 1188 EPDSSFKEAS--CKTPKINHAPTSVSTPLSPGSVSSAASQYKDCLESITFQVKTEFASCW 1245 Query: 1962 GAEE----ACDEFSFMPATARKQEGLNTSASSPPDSDNEVHSSNSEGFHGFLQDLAGGDT 2129 ++E D+F + A+K + L TS+ +PP S G L G + Sbjct: 1246 NSQEFIQTLSDDFISVRERAKKLDSLLTSSETPP--------SRLTGLKR-LSSFIGAGS 1296 Query: 2130 PGNPCADDAKAMEELCARSLPQSDNDFGLRDQPLDDIFWHDSLGPLDLDIPPIRSLADEF 2309 P A D+ RSLP+ + +D++ PP + L D+ Sbjct: 1297 PSLVKACDSSPPHATQRRSLPKVE---AFSQHHIDEL------------PPPSQELLDDI 1341 Query: 2310 -ILGDSQNSWSRMMENS 2357 +L Q S + + EN+ Sbjct: 1342 ELLKQQQGSSTVLHENT 1358
>Q47452:PCOA_ECOLI Copper resistance protein A precursor - Escherichia coli| Length = 605 Score = 35.4 bits (80), Expect = 1.3 Identities = 35/137 (25%), Positives = 54/137 (39%) Frame = +3 Query: 1860 NPCSCDSFDAAVALHASRYQAAEQPAHTSHSTIWGAEEACDEFSFMPATARKQEGLNTSA 2039 NP + D F AVA Y +P +++ ++ D + T +EGL SA Sbjct: 302 NPVTVDEFRIAVA---ETYDVIVEPQGEAYTIF---AQSMDRTGYARGTLATREGL--SA 353 Query: 2040 SSPPDSDNEVHSSNSEGFHGFLQDLAGGDTPGNPCADDAKAMEELCARSLPQSDNDFGLR 2219 + PP + + G G D+AG D D++ M + LP D G Sbjct: 354 AVPPLDPRPLLTMEDMGMGGMGHDMAGMDHSQMGGMDNSGEMMSMDGADLP----DSGTS 409 Query: 2220 DQPLDDIFWHDSLGPLD 2270 P+D H S+ +D Sbjct: 410 SAPMD----HSSMAGMD 422
>P17101:VMSA_HBVW9 Major surface antigen precursor - Hepatitis B virus subtype adw| (strain 991) (HBV) Length = 400 Score = 34.7 bits (78), Expect = 2.1 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 12/75 (16%) Frame = +3 Query: 1998 PATARKQEGLNTSASSPP--DSDNEVHSSNSEGFHGFLQD--------LAGGDTPG--NP 2141 PA+A +Q G + SPP DS + NS FH LQD AGG + G NP Sbjct: 94 PASANRQSGRQPTPISPPLRDSHPQAMQWNSTAFHQALQDPRVRGLYFPAGGSSSGTVNP 153 Query: 2142 CADDAKAMEELCARS 2186 + A + + AR+ Sbjct: 154 APNIASHISSISART 168
>P04197:MYB_DROME Myb protein - Drosophila melanogaster (Fruit fly)| Length = 657 Score = 34.7 bits (78), Expect = 2.1 Identities = 13/46 (28%), Positives = 28/46 (60%) Frame = +3 Query: 297 AWTRQEEESFFNALRQVGKNFEKITLRVQGKNKDQVRHYYYRLVRR 434 AWT +E+E + A ++G + KI R+ G+ + +++++ +RR Sbjct: 190 AWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRR 235
>Q7G8Y3:ISW2_ORYSJ Probable chromatin remodelling complex ATPase chain - Oryza sativa| subsp. japonica (Rice) Length = 1107 Score = 34.3 bits (77), Expect = 2.8 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +3 Query: 291 WAAWTRQEEESFFNALRQVGKN-FEKITLRVQGKNKDQVRHYYYRLVRRMKKL 446 +A WTR++ +F A + G+N I ++GK +++V+ Y R K+L Sbjct: 879 FATWTRRDFNTFIRACEKYGRNDIRSIAAEMEGKTEEEVQRYAKVFKERYKEL 931
>O97939:ENAM_PIG Enamelin precursor [Contains: 89 kDa enamelin; 142 kDa enamelin; 155| kDa enamelin; 56 kDa enamelin; 32 kDa enamelin; 25 kDa enamelin; 34 kDa enamelin] - Sus scrofa (Pig) Length = 1142 Score = 33.5 bits (75), Expect = 4.8 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Frame = +3 Query: 1560 NSKDQSALLLGTPSITGKNAEEEPYSNTSPS--QSVDHNQEQVPANQAFEV----DPQID 1721 N DQS L TP+ + E +PYSN SP+ Q E N ++ P+ D Sbjct: 780 NFWDQSTNLYKTPTSSPHQKENQPYSNNSPAGLQKNPTWHEGENLNYGMQITRLNSPERD 839 Query: 1722 YLAIPEL 1742 +LA P+L Sbjct: 840 HLAFPDL 846
>Q96605:NCAP_IBVV1 Nucleocapsid protein - Avian infectious bronchitis virus (strain| V18/91) (IBV) Length = 409 Score = 33.1 bits (74), Expect = 6.3 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%) Frame = +3 Query: 1452 FENCMIPEDVQV----RFSEACVQKDGTLPSDFTSERSSTNSKDQSALLLGTPSITGKNA 1619 FE + ED Q + + CV GT P D + RS SKD+++ P+ + Sbjct: 304 FETVVKREDPQFANYSKICDECVDGVGTRPKDDPTPRSRAASKDRNS----APATPKQQR 359 Query: 1620 EEEPYSNTSPSQSVDHNQEQVPANQAFEVDPQIDYLAIP-ELDWADTLTD 1766 ++ + S+ +E+V N+ E D D IP ++DW + D Sbjct: 360 AKKVHKKKEEESSLTEEEEEV--NKQLEYDD--DVTDIPNKIDWGEGAFD 405
>Q01538:MYT1_HUMAN Myelin transcription factor 1 - Homo sapiens (Human)| Length = 1121 Score = 33.1 bits (74), Expect = 6.3 Identities = 21/85 (24%), Positives = 39/85 (45%) Frame = +3 Query: 1470 PEDVQVRFSEACVQKDGTLPSDFTSERSSTNSKDQSALLLGTPSITGKNAEEEPYSNTSP 1649 P+D+ + + V ++GTL R N+ S+ +P + +A + S ++P Sbjct: 651 PQDLPSKSVDIEVDENGTLDLSMHKHRKRENAFPSSSSCSSSPGVKSPDASQRHSSTSAP 710 Query: 1650 SQSVDHNQEQVPANQAFEVDPQIDY 1724 S S+ Q A++ E D +DY Sbjct: 711 SSSMTSPQSS-QASRQDEWDRPLDY 734
>Q7XI75:CARM1_ORYSJ Probable histone-arginine methyltransferase CARM1 - Oryza sativa| subsp. japonica (Rice) Length = 528 Score = 33.1 bits (74), Expect = 6.3 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = -2 Query: 1017 KLALLHPHYRTSSGSPYCVQAPQLHQQLKKHQP 919 KL L P+YR S PY +Q Q QQL QP Sbjct: 484 KLELKEPYYRLSQPQPYVMQQDQQQQQLPSLQP 516
>A2YPT7:CARM1_ORYSI Probable histone-arginine methyltransferase CARM1 - Oryza sativa| subsp. indica (Rice) Length = 528 Score = 33.1 bits (74), Expect = 6.3 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = -2 Query: 1017 KLALLHPHYRTSSGSPYCVQAPQLHQQLKKHQP 919 KL L P+YR S PY +Q Q QQL QP Sbjct: 484 KLELKEPYYRLSQPQPYVMQQDQQQQQLPSLQP 516
>P22035:BAS1_YEAST Myb-like DNA-binding protein BAS1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 811 Score = 32.7 bits (73), Expect = 8.2 Identities = 15/53 (28%), Positives = 29/53 (54%) Frame = +3 Query: 300 WTRQEEESFFNALRQVGKNFEKITLRVQGKNKDQVRHYYYRLVRRMKKLLGPG 458 WT++E+E A + G ++ I++ + G+ +DQ +R ++LGPG Sbjct: 119 WTQEEDEQLLKAYEEHGPHWLSISMDIPGRTEDQ-------CAKRYIEVLGPG 164 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 484,298,384 Number of extensions: 10697593 Number of successful extensions: 28790 Number of sequences better than 10.0: 16 Number of HSP's gapped: 28752 Number of HSP's successfully gapped: 18 Length of query: 901 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 779 Effective length of database: 67,222,449 Effective search space: 52366287771 Effective search space used: 52366287771 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
