>LOC_Os08g25624:12008.t02329:unspliced-genomic triose phosphate/phosphate translocator, non-green|
plastid,chloroplast precursor, putative, expressed
Length = 6860
Score = 30.9 bits (61), Expect = 6.7
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 329 MHAPCMHHRIVSIYYY 376
+H+PC H+R+ SIY Y
Sbjct: 4584 IHSPCCHNRVCSIYKY 4537
>LOC_Os01g34040:12001.t02969:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 6035
Score = 24.9 bits (48), Expect(2) = 7.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 409 RPSIRLRLHGMIVVDRYDTMMHARCMHDR 323
+P+ RL L G V R+D ++ RC +R
Sbjct: 897 QPATRLTLEGHGKVIRHDPVVSPRCHDNR 811
Score = 22.6 bits (43), Expect(2) = 7.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1 / -1
Query: 488 PGRFYLGGRFTRMAWH 441
PGR Y+ +F WH
Sbjct: 986 PGRGYVPWKFVMNCWH 939
>LOC_Os08g23100:12008.t02082:unspliced-genomic cyclase, putative, expressed|
Length = 7144
Score = 27.6 bits (54), Expect(2) = 9.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3 / -1
Query: 447 CHPCKTPS*IKSPWFNYKKKKK 512
CH C +K FN KKKKK
Sbjct: 4120 CHVCSRHYYLKKKSFNIKKKKK 4055
Score = 24.4 bits (47), Expect(2) = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2 / -3
Query: 314 DRSSIMHAPCMHHRIVSIYYYH 379
D + I PC+H + +SI Y H
Sbjct: 5225 DSTYIEKIPCVHLKTLSIPYMH 5160
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 140,383,592
Number of extensions: 1970392
Number of successful extensions: 6030
Number of sequences better than 10.0: 6
Length of query: 170
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 122
Effective length of database: 52,912,542
Effective search space: 6455330124
Effective search space used: 6455330124
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)