ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf141h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK099694:Os11g0240900 592 e-169
2AK059540:Os12g0197900 270 3e-72
3AK101193:Os07g0592600 34 0.41
4AK119857: 33 0.92
5Os09g0368200:Os09g0368200 31 3.5
6Os05g0407900:Os05g0407900 30 4.6
7Os10g0158400:Os10g0158400 30 6.0

>AK099694:Os11g0240900 |
          Length = 451
 Score =  592 bits (1525), Expect = e-169
 Identities = 297/407 (72%), Positives = 337/407 (82%)
 Frame = +1

Query: 190  DVVADFLVRFPRERRLRVGATLCFLLEDKKMLHPTGRLIAFAILHQSYSSQPVNPYVPLL 369
            DVVADFL R   ERRLR GA + F+L+DK ML P  RL+AF ILHQ YSSQ  NP+VPL+
Sbjct: 52   DVVADFLARIQPERRLRFGAAINFVLKDKMMLRPAERLVAFTILHQGYSSQLENPFVPLI 111

Query: 370  LNAACDESSDKSERAFVQLLLTSASGDDNNEVLQKSAVDYVNEPVSASQALLSWEQLEKQ 549
            ++AACDE+SDK E+ F+QLLL S +GD++ E+L+ SA DY+ E   ASQ LL+ EQLE+Q
Sbjct: 112  IHAACDETSDKPEQLFLQLLLNSTNGDNDREILKHSAADYLEESAYASQVLLTREQLERQ 171

Query: 550  YRGNIVQPQSQASSFRSATVRCAIPDPDIPQSCANSSEISAPESKQKSASDDRDSALVAL 729
            Y  N VQPQ    SFR ATVR  IPDPDI QSC +SSEIS  +S       +RD+ +  L
Sbjct: 172  YTCNEVQPQPSTGSFREATVRSVIPDPDISQSCTDSSEISITKS-------NRDNLVTCL 224

Query: 730  LQAKSWGRLGPQWIRPTPPRLQILDGELQWLNPDNTHELLWDYSMCADTSRGAAIRDLIA 909
            LQ  S   +GPQWIRP PPRL+ILDGELQWLN DN HELLWD SMCADTSRGAAIRDL+ 
Sbjct: 225  LQQTSLDGIGPQWIRPPPPRLEILDGELQWLNLDNNHELLWDSSMCADTSRGAAIRDLVG 284

Query: 910  RALKGPLVPAQQEQVVIELVKDSKLVYHCGMTPQKLPDLVEHNPLIAVELLSKLMNSPDI 1089
            +A KGPL PAQQEQV++EL KD KLVYHCGMTPQKLPDLVEHNPL+AVE+LSKL+NSPD+
Sbjct: 285  KACKGPLSPAQQEQVLVELAKDWKLVYHCGMTPQKLPDLVEHNPLVAVEVLSKLINSPDM 344

Query: 1090 AGYFDVLVHMEMSLHSMEVVNRLTTAVELPTGFVHEYISNCIQSCQNIKDKYMQNRLVRL 1269
              YFD+LVHMEMSLHSMEVVNRLTTAV+LP GF+H+YISNCI+SCQNIKDKYMQNRLVRL
Sbjct: 345  DAYFDILVHMEMSLHSMEVVNRLTTAVDLPPGFIHDYISNCIRSCQNIKDKYMQNRLVRL 404

Query: 1270 VCVFLQSLIRNQIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKSLE 1410
            VCVFLQSLIRN+IINVQDLFIEVQAFCI FSRIREAAGLFRLLKSLE
Sbjct: 405  VCVFLQSLIRNKIINVQDLFIEVQAFCIAFSRIREAAGLFRLLKSLE 451



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>AK059540:Os12g0197900 |
          Length = 140

 Score =  270 bits (690), Expect = 3e-72
 Identities = 134/140 (95%), Positives = 137/140 (97%)
 Frame = +1

Query: 991  HCGMTPQKLPDLVEHNPLIAVELLSKLMNSPDIAGYFDVLVHMEMSLHSMEVVNRLTTAV 1170
            HCGMTPQKLPDLVEHNPLIAVE+LSKLMNSPDI GY DVLVHMEMSLHSMEVVNRLTTAV
Sbjct: 1    HCGMTPQKLPDLVEHNPLIAVEILSKLMNSPDIDGYLDVLVHMEMSLHSMEVVNRLTTAV 60

Query: 1171 ELPTGFVHEYISNCIQSCQNIKDKYMQNRLVRLVCVFLQSLIRNQIINVQDLFIEVQAFC 1350
            ELPT FVHEYISNCIQSCQN+KDKYMQNRLVRLVCVFLQSLIRN+IINVQDLFIEVQAFC
Sbjct: 61   ELPTEFVHEYISNCIQSCQNVKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFC 120

Query: 1351 IEFSRIREAAGLFRLLKSLE 1410
            IEFSRIREAAGLFRLLKSLE
Sbjct: 121  IEFSRIREAAGLFRLLKSLE 140



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>AK101193:Os07g0592600 |
          Length = 605

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 6/137 (4%)
 Frame = +1

Query: 244 GATLCFLLEDKKMLHPTGRLIAFAILHQSYSS-----QPVNPYVPLLLNAACDESSDKSE 408
           G  L FL    +   P G L A  +L   Y S     +P +PY       A    +D  +
Sbjct: 156 GKGLYFLFVKSETKTPGG-LTARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADAFQ 214

Query: 409 RAFVQLLLTSASGDDNNEVLQKSAVDYVNEPVSASQAL-LSWEQLEKQYRGNIVQPQSQA 585
             + Q++         N+VL+  AV + +  + A + L L+WEQL        + P+   
Sbjct: 215 SMYAQMVCGLCQ---RNDVLRLGAV-FASGLLRAIRFLQLNWEQLADDIESGELTPRVTD 270

Query: 586 SSFRSATVRCAIPDPDI 636
            S R A     +PDP++
Sbjct: 271 PSVREAVAAILLPDPEL 287



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>AK119857: |
          Length = 855

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -1

Query: 460 RCYHLRWPKSTKVGQMLVLIYLMIHHKLHLTAEEHRDLLAVRNSSDE 320
           RC  +++ + T VG  +  +     H+ HLT E  R +L VRN+SD+
Sbjct: 250 RCGFVQFDRDTAVGACIHAL-----HQFHLTLEGKRYILTVRNASDQ 291



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>Os09g0368200:Os09g0368200 |
          Length = 516

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 15/54 (27%)
 Frame = +1

Query: 529 WEQLEKQYR-GNIV--------------QPQSQASSFRSATVRCAIPDPDIPQS 645
           W++ EKQY   N++              QP SQ  +     VRC  PD D+P +
Sbjct: 376 WQEFEKQYPDANVLLVTVTDEESRRIEQQPDSQTKAEIMEVVRCMFPDEDVPDA 429



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>Os05g0407900:Os05g0407900 |
          Length = 498

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 8/39 (20%)
 Frame = +1

Query: 997  GMTPQKLPDLVEHN--------PLIAVELLSKLMNSPDI 1089
            G+ P  LP LVEHN        PL ++ELLS L  +P +
Sbjct: 85   GVDPDPLPALVEHNFPTLLAVSPLASLELLSLLRPNPQL 123



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>Os10g0158400:Os10g0158400 |
          Length = 398

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 23/83 (27%), Positives = 41/83 (49%)
 Frame = -1

Query: 1867 NILVEPNKTDYNKQIRYCSDYTDIKE*TKTCIYYPSTYNARIQTHLNVDQPQIAYHLDLL 1688
            NI+ + N  DY   +      T++KE  K  I + S    R   ++++D   I+ H +++
Sbjct: 35   NIMFQDNFADYYFGLTKSEHLTELKEKMKR-ICHKSGIEKR---YIHLDAELISVHPEII 90

Query: 1687 LRPFLSTLTRVCIVIARVPQILQ 1619
             +   S  TRV IV   VP++ +
Sbjct: 91   DKHLPSLETRVDIVATEVPKLAE 113


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 52,037,807
Number of extensions: 1169037
Number of successful extensions: 3343
Number of sequences better than 10.0: 7
Number of HSP's gapped: 3336
Number of HSP's successfully gapped: 7
Length of query: 636
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 529
Effective length of database: 11,115,468
Effective search space: 5880082572
Effective search space used: 5880082572
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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