ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf141h18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107573.1| Zea mays PCO077294 mRNA sequence Length = 1110 Score = 529 bits (267), Expect = e-146 Identities = 528/615 (85%) Strand = Plus / Plus Query: 800 ttgatggggagctacagtggctaaatcctgacaacactcatgagctattatgggattata 859 |||||||||||||||| ||||| || |||||||| | || ||||||||||||||||||| Sbjct: 318 ttgatggggagctacaatggctgaaccctgacaataaccacgagctattatgggattata 377 Query: 860 gcatgtgtgctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaa 919 |||||||||||||||||| ||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 378 gcatgtgtgctgacacgaatcgaggggctgctatccgagatttgattgcaagagccttaa 437 Query: 920 aaggtcctcttgtacctgctcaacaggagcaagttgttatagaattggtgaaggactcta 979 ||||||| |||| |||| ||||||||||||||| || ||||| ||| ||||| ||| Sbjct: 438 aaggtccacttgcacctattcaacaggagcaagtcgtagtagaactggcaaaggatccta 497 Query: 980 agctagtctatcactgtgggatgactccacagaaacttccagaccttgttgagcataatc 1039 | || || ||| | |||||||||||||||||||| ||||| || |||||||| || || | Sbjct: 498 aactggtttattattgtgggatgactccacagaagcttcctgatcttgttgaacacaacc 557 Query: 1040 cactcattgctgtagagcttctttcgaagcttatgaactctccggacattgcaggttatt 1099 ||||||||||||| ||| ||||||| ||||| || ||||||| |||||| ||||||| | Sbjct: 558 cactcattgctgttgaggttctttcaaagctaattcactctcctgacatttcaggttact 617 Query: 1100 ttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgtaaacagactta 1159 |||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| | Sbjct: 618 ttgatgttcttgtgcacatggaaatgagcctgcattctatggaagttgtgaacagactca 677 Query: 1160 ctactgcggttgaactcccgacaggatttgtccacgaatacatctcaaattgtattcaat 1219 ||||||| ||||| || || |||| ||||||||| || |||||| |||||||||| |||| Sbjct: 678 ctactgccgttgaccttccaacagaatttgtccatgagtacatcacaaattgtatccaat 737 Query: 1220 catgtcaaaacattaaggataagtacatgcagaacagactggtgagattggtttgtgttt 1279 ||||||||||||| |||||||| |||||||| |||||||| |||||| | |||||||||| Sbjct: 738 catgtcaaaacataaaggataaatacatgcaaaacagacttgtgagactagtttgtgttt 797 Query: 1280 tcctccagagcctcatccgaaatcaaattattaacgttcaagatcttttcattgaggtac 1339 | || ||||| || |||||||| | ||||| ||||||||||| |||||||| ||||||| Sbjct: 798 ttctgcagagtcttatccgaaacaagattataaacgttcaagaccttttcatcgaggtac 857 Query: 1340 aggcgttctgcatagagttctcacgaataagggaagcggctggcttattccgtctgctca 1399 | |||||||| || || || ||||| ||||||||||| ||||| || ||||| || |||| Sbjct: 858 aagcgttctgtattgaattttcacggataagggaagcagctggtttgttccggctactca 917 Query: 1400 aatctttggagtgaa 1414 | || |||||||||| Sbjct: 918 agtcgttggagtgaa 932 Score = 71.9 bits (36), Expect = 8e-09 Identities = 92/111 (82%), Gaps = 6/111 (5%) Strand = Plus / Plus Query: 607 gttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcaga---- 662 |||||| |||||||||| |||||||| | | |||||||||||| ||||||||||| Sbjct: 119 gttagaagtgctataccagatccagacgtccgtcaaagttgtgcaaattcatcagagtct 178 Query: 663 --gatatcagcgcctgaaagcaaacaaaaatctgcttccgatgatagagat 711 ||||||| | |||| ||||||||| |||||||| || |||||||||||| Sbjct: 179 tcgatatcaccacctggaagcaaacagaaatctgcgtctgatgatagagat 229
>ref|NM_001072894.1| Oryza sativa (japonica cultivar-group) Os12g0197900 (Os12g0197900) mRNA, partial cds Length = 934 Score = 400 bits (202), Expect = e-108 Identities = 367/422 (86%) Strand = Plus / Plus Query: 997 gggatgactccacagaaacttccagaccttgttgagcataatccactcattgctgtagag 1056 |||||||||||||| || || || ||||||||||| || ||||||||||||||||| || Sbjct: 8 gggatgactccacaaaagctccctgaccttgttgaacacaatccactcattgctgttgaa 67 Query: 1057 cttctttcgaagcttatgaactctccggacattgcaggttattttgatgttcttgtgcac 1116 |||||||||| | ||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 68 attctttcgaaattgatgaactctcctgacattgatggttacttagatgttcttgtgcat 127 Query: 1117 atggagatgagcctacattcgatggaagttgtaaacagacttactactgcggttgaactc 1176 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 128 atggagatgagcctgcattctatggaagttgtaaacaggcttactactgctgtagaactc 187 Query: 1177 ccgacaggatttgtccacgaatacatctcaaattgtattcaatcatgtcaaaacattaag 1236 ||||||| |||||||| || |||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 188 ccgacagagtttgtccatgagtacatctcgaattgcatccaatcatgtcagaacgttaag 247 Query: 1237 gataagtacatgcagaacagactggtgagattggtttgtgttttcctccagagcctcatc 1296 ||||| |||||||||||||| |||||||| | |||||||||||||| ||| |||||| Sbjct: 248 gataaatacatgcagaacaggttggtgagactagtttgtgttttccttcagtctctcatc 307 Query: 1297 cgaaatcaaattattaacgttcaagatcttttcattgaggtacaggcgttctgcatagag 1356 ||||| | || || ||||||||||| || ||||| |||||||| || |||||||| ||| Sbjct: 308 cgaaacaagatcataaacgttcaagacctcttcatcgaggtacaagctttctgcattgag 367 Query: 1357 ttctcacgaataagggaagcggctggcttattccgtctgctcaaatctttggagtgaaga 1416 |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 368 ttctcacggataagggaagcagctggcttattccggctgctcaaatctttggagtgaaga 427 Query: 1417 aa 1418 || Sbjct: 428 aa 429
>dbj|AK059540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E08, full insert sequence Length = 934 Score = 400 bits (202), Expect = e-108 Identities = 367/422 (86%) Strand = Plus / Plus Query: 997 gggatgactccacagaaacttccagaccttgttgagcataatccactcattgctgtagag 1056 |||||||||||||| || || || ||||||||||| || ||||||||||||||||| || Sbjct: 8 gggatgactccacaaaagctccctgaccttgttgaacacaatccactcattgctgttgaa 67 Query: 1057 cttctttcgaagcttatgaactctccggacattgcaggttattttgatgttcttgtgcac 1116 |||||||||| | ||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 68 attctttcgaaattgatgaactctcctgacattgatggttacttagatgttcttgtgcat 127 Query: 1117 atggagatgagcctacattcgatggaagttgtaaacagacttactactgcggttgaactc 1176 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| || |||||| Sbjct: 128 atggagatgagcctgcattctatggaagttgtaaacaggcttactactgctgtagaactc 187 Query: 1177 ccgacaggatttgtccacgaatacatctcaaattgtattcaatcatgtcaaaacattaag 1236 ||||||| |||||||| || |||||||| ||||| || ||||||||||| ||| ||||| Sbjct: 188 ccgacagagtttgtccatgagtacatctcgaattgcatccaatcatgtcagaacgttaag 247 Query: 1237 gataagtacatgcagaacagactggtgagattggtttgtgttttcctccagagcctcatc 1296 ||||| |||||||||||||| |||||||| | |||||||||||||| ||| |||||| Sbjct: 248 gataaatacatgcagaacaggttggtgagactagtttgtgttttccttcagtctctcatc 307 Query: 1297 cgaaatcaaattattaacgttcaagatcttttcattgaggtacaggcgttctgcatagag 1356 ||||| | || || ||||||||||| || ||||| |||||||| || |||||||| ||| Sbjct: 308 cgaaacaagatcataaacgttcaagacctcttcatcgaggtacaagctttctgcattgag 367 Query: 1357 ttctcacgaataagggaagcggctggcttattccgtctgctcaaatctttggagtgaaga 1416 |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 368 ttctcacggataagggaagcagctggcttattccggctgctcaaatctttggagtgaaga 427 Query: 1417 aa 1418 || Sbjct: 428 aa 429
>ref|NM_001074115.1| Oryza sativa (japonica cultivar-group) Os11g0240900 (Os11g0240900) mRNA, complete cds Length = 1575 Score = 295 bits (149), Expect = 3e-76 Identities = 485/597 (81%) Strand = Plus / Plus Query: 786 aagacttcagatacttgatggggagctacagtggctaaatcctgacaacactcatgagct 845 ||||||| | ||||||||||| ||| | |||||||| || | ||||||| || ||||| Sbjct: 760 aagacttgaaatacttgatggagagttgcagtggctgaacctagacaacaaccacgagct 819 Query: 846 attatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgatttgat 905 ||| ||||| ||| ||||||||||| || ||||| || ||||||||||| ||||| | Sbjct: 820 attgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagatttagt 879 Query: 906 tgcgagagccttaaaaggtcctcttgtacctgctcaacaggagcaagttgttatagaatt 965 || | ||| | ||||| || ||| |||||| ||||||||||||||| | | ||||| Sbjct: 880 tggaaaagcttgtaaaggaccactttcacctgcccaacaggagcaagttctggtggaatt 939 Query: 966 ggtgaaggactctaagctagtctatcactgtgggatgactccacagaaacttccagacct 1025 || ||||||| |||||||| ||||| ||||||||||| |||||||| || || ||||| Sbjct: 940 ggcaaaggactggaagctagtttatcattgtgggatgacaccacagaagctccctgacct 999 Query: 1026 tgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactctccgga 1085 ||| || |||||||||||| ||||||| || | ||||| ||| | || ||||| || || Sbjct: 1000 tgtggaacataatccactcgttgctgttgaagtcctttcaaagttaatcaactcgcctga 1059 Query: 1086 cattgcaggttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagt 1145 ||| | | ||| |||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 1060 catggatgcttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagt 1119 Query: 1146 tgtaaacagacttactactgcggttgaactcccgacaggatttgtccacgaatacatctc 1205 ||||||||| || ||||| || || || || || ||||||| | || || |||||||| Sbjct: 1120 tgtaaacaggctcactacagcagtagatctaccaccaggattcattcatgactacatctc 1179 Query: 1206 aaattgtattcaatcatgtcaaaacattaaggataagtacatgcagaacagactggtgag 1265 ||| ||||||| |||||||||||||||||||||||| |||||||| ||||| || || || Sbjct: 1180 aaactgtattcgatcatgtcaaaacattaaggataaatacatgcaaaacaggctagtaag 1239 Query: 1266 attggtttgtgttttcctccagagcctcatccgaaatcaaattattaacgttcaagatct 1325 | || ||||||||||| ||||| ||||| ||||| | || || || || |||||||| Sbjct: 1240 gctagtatgtgttttcctacagagtctcattcgaaacaagataataaatgtgcaagatct 1299 Query: 1326 tttcattgaggtacaggcgttctgcatagagttctcacgaataagggaagcggctgg 1382 ||||| |||||||||||||||||||| | ||| || |||||||| ||||||||||| Sbjct: 1300 cttcatcgaggtacaggcgttctgcattgcgttttcccgaataagagaagcggctgg 1356 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 587 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaagtt 646 ||||||||||| |||||||||||| ||| ||| || ||||||||||| ||||||| | Sbjct: 582 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaagct 641 Query: 647 gtgccaattcatcagagatatca 669 | | ||||||||||||||||| Sbjct: 642 gcactgattcatcagagatatca 664 Score = 50.1 bits (25), Expect = 0.030 Identities = 85/105 (80%) Strand = Plus / Plus Query: 305 ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 364 ||||||| ||||||||||||| | |||||||||||| | |||||||| |||||||| Sbjct: 300 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 359 Query: 365 tgctgttaaatgcagcttgtgatgaatcatcagataaatcagaac 409 | | || |||| |||||||||||| | || |||||| |||||| Sbjct: 360 taataatacatgctgcttgtgatgaaacctctgataaaccagaac 404
>dbj|AK099694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074F01, full insert sequence Length = 1577 Score = 274 bits (138), Expect = 1e-69 Identities = 372/450 (82%) Strand = Plus / Plus Query: 933 acctgctcaacaggagcaagttgttatagaattggtgaaggactctaagctagtctatca 992 |||||| ||||||||||||||| | | ||||||| ||||||| |||||||| ||||| Sbjct: 907 acctgcccaacaggagcaagttctggtggaattggcaaaggactggaagctagtttatca 966 Query: 993 ctgtgggatgactccacagaaacttccagaccttgttgagcataatccactcattgctgt 1052 ||||||||||| |||||||| || || |||||||| || |||||||||||| ||||||| Sbjct: 967 ttgtgggatgacaccacagaagctccctgaccttgtggaacataatccactcgttgctgt 1026 Query: 1053 agagcttctttcgaagcttatgaactctccggacattgcaggttattttgatgttcttgt 1112 || | ||||| ||| | || ||||| || ||||| | | ||| |||||| ||||||| Sbjct: 1027 tgaagtcctttcaaagttaatcaactcgcctgacatggatgcttactttgatattcttgt 1086 Query: 1113 gcacatggagatgagcctacattcgatggaagttgtaaacagacttactactgcggttga 1172 ||||||||| |||||||||||||| ||||||||||||||||| || ||||| || || || Sbjct: 1087 gcacatggaaatgagcctacattcaatggaagttgtaaacaggctcactacagcagtaga 1146 Query: 1173 actcccgacaggatttgtccacgaatacatctcaaattgtattcaatcatgtcaaaacat 1232 || || ||||||| | || || ||||||||||| ||||||| ||||||||||||||| Sbjct: 1147 tctaccaccaggattcattcatgactacatctcaaactgtattcgatcatgtcaaaacat 1206 Query: 1233 taaggataagtacatgcagaacagactggtgagattggtttgtgttttcctccagagcct 1292 ||||||||| |||||||| ||||| || || || | || ||||||||||| ||||| || Sbjct: 1207 taaggataaatacatgcaaaacaggctagtaaggctagtatgtgttttcctacagagtct 1266 Query: 1293 catccgaaatcaaattattaacgttcaagatcttttcattgaggtacaggcgttctgcat 1352 ||| ||||| | || || || || |||||||| ||||| |||||||||||||||||||| Sbjct: 1267 cattcgaaacaagataataaatgtgcaagatctcttcatcgaggtacaggcgttctgcat 1326 Query: 1353 agagttctcacgaataagggaagcggctgg 1382 | ||| || |||||||| ||||||||||| Sbjct: 1327 tgcgttttcccgaataagagaagcggctgg 1356 Score = 58.0 bits (29), Expect = 1e-04 Identities = 95/117 (81%) Strand = Plus / Plus Query: 786 aagacttcagatacttgatggggagctacagtggctaaatcctgacaacactcatgagct 845 ||||||| | ||||||||||| ||| | |||||||| || | ||||||| || ||||| Sbjct: 761 aagacttgaaatacttgatggagagttgcagtggctgaacctagacaacaaccacgagct 820 Query: 846 attatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgattt 902 ||| ||||| ||| ||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 821 attgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagattt 877 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 587 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaagtt 646 ||||||||||| |||||||||||| ||| ||| || ||||||||||| ||||||| | Sbjct: 583 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaagct 642 Query: 647 gtgccaattcatcagagatatca 669 | | ||||||||||||||||| Sbjct: 643 gcactgattcatcagagatatca 665 Score = 50.1 bits (25), Expect = 0.030 Identities = 85/105 (80%) Strand = Plus / Plus Query: 305 ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 364 ||||||| ||||||||||||| | |||||||||||| | |||||||| |||||||| Sbjct: 301 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 360 Query: 365 tgctgttaaatgcagcttgtgatgaatcatcagataaatcagaac 409 | | || |||| |||||||||||| | || |||||| |||||| Sbjct: 361 taataatacatgctgcttgtgatgaaacctctgataaaccagaac 405
>emb|CT834368.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108D05, full insert sequence Length = 1116 Score = 256 bits (129), Expect = 3e-64 Identities = 482/597 (80%), Gaps = 2/597 (0%) Strand = Plus / Plus Query: 786 aagacttcagatacttgatggggagctacagtggctaaatcctgacaacactcatgagct 845 ||||||| | ||||||||||| ||| | |||||||| || | ||||||| || ||||| Sbjct: 319 aagacttgaaatacttgatggagagttgcagtggctgaacctagacaacaaccacgagct 378 Query: 846 attatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgatttgat 905 ||| ||||| ||| ||||||||||| || ||||| || ||||||||||| ||||| | Sbjct: 379 attgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagatttagt 438 Query: 906 tgcgagagccttaaaaggtcctcttgtacctgctcaacaggagcaagttgttatagaatt 965 || | ||| | ||||| || ||| |||||| ||||||||||||||| | | ||||| Sbjct: 439 tggaaaagcttgtaaaggaccactttcacctgcccaacaggagcaagttctggtggaatt 498 Query: 966 ggtgaaggactctaagctagtctatcactgtgggatgactccacagaaacttccagacct 1025 || ||||||| |||||||| ||||| ||||||||||| |||||||| || || ||||| Sbjct: 499 ggcaaaggactggaagctagtttatcattgtgggatgacaccacagaagctccctgacct 558 Query: 1026 tgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactctccgga 1085 ||| || |||||||||||| ||||||| || | ||||| ||| | || ||||| || || Sbjct: 559 tgtggaacataatccactcgttgctgttgaagtcctttcaaagttaatcaactcgcctga 618 Query: 1086 cattgcaggttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagt 1145 ||| | | ||| |||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 619 catggatgcttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagt 678 Query: 1146 tgtaaacagacttactactgcggttgaactcccgacaggatttgtccacgaatacatctc 1205 ||||||||| || ||||| || || || || || ||||||| | || || |||||||| Sbjct: 679 tgtaaacaggctcactacagcagtagatctaccaccaggattcattcatgactacatctc 738 Query: 1206 aaattgtattcaatcatgtcaaaacattaaggataagtacatgcagaacagactggtgag 1265 || ||||||| |||||||||||||||||||||||| |||||||| ||||| || || || Sbjct: 739 -aactgtattcgatcatgtcaaaacattaaggataaatacatgcaaaacaggctagtaag 797 Query: 1266 attggtttgtgttttcctccagagcctcatccgaaatcaaattattaacgttcaagatct 1325 | || ||||||||||| ||||| ||||| ||||| | || || || || |||||||| Sbjct: 798 gctagtatgtgttttcctacagagtctcattcgaaacaagataataaatgtgcaagatct 857 Query: 1326 tttcattgaggtacaggcgttctgcatagagttctcacgaataagggaagcggctgg 1382 ||| | |||||||||||||||||||| | ||| || |||||||| ||| ||||||| Sbjct: 858 cttc-tcgaggtacaggcgttctgcattgcgttttcccgaataagagaaccggctgg 913 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 587 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaagtt 646 ||||||||||| |||||||||||| ||| ||| || ||||||||||| ||||||| | Sbjct: 141 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaagct 200 Query: 647 gtgccaattcatcagagatatca 669 | | ||||||||||||||||| Sbjct: 201 gcactgattcatcagagatatca 223
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 151 bits (76), Expect = 1e-32 Identities = 121/136 (88%) Strand = Plus / Plus Query: 1102 gatgttcttgtgcacatggagatgagcctacattcgatggaagttgtaaacagacttact 1161 |||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 5065622 gatgttcttgtgcatatggagatgagcctgcattctatggaagttgtaaacaggcttact 5065681 Query: 1162 actgcggttgaactcccgacaggatttgtccacgaatacatctcaaattgtattcaatca 1221 ||||| || ||||||||||||| |||||||| || |||||||| ||||| || |||||| Sbjct: 5065682 actgctgtagaactcccgacagagtttgtccatgagtacatctcgaattgcatccaatca 5065741 Query: 1222 tgtcaaaacattaagg 1237 ||||| ||| |||||| Sbjct: 5065742 tgtcagaacgttaagg 5065757 Score = 135 bits (68), Expect = 7e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 809 agctacagtggctaaatcctgacaacactcatgagctattatgggattatagcatgtgtg 868 ||||||| ||| | || |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 5064889 agctacaatggttgaaccctgacaacaatcacgagctattatgggattatagcatgtgtg 5064948 Query: 869 ctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaaaaggtcctc 928 ||||||| ||||| || ||||| || || ||||||||||| ||||||||||||||||| | Sbjct: 5064949 ctgacacaagtcgaggtgctgctattcgagatttgattgcaagagccttaaaaggtccac 5065008 Query: 929 ttgtacct 936 ||| |||| Sbjct: 5065009 ttgcacct 5065016 Score = 135 bits (68), Expect = 7e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 1315 gttcaagatcttttcattgaggtacaggcgttctgcatagagttctcacgaataagggaa 1374 |||||||| || ||||| |||||||| || |||||||| ||||||||||| ||||||||| Sbjct: 5067325 gttcaagacctcttcatcgaggtacaagctttctgcattgagttctcacggataagggaa 5067384 Query: 1375 gcggctggcttattccgtctgctcaaatctttggagtgaagaaa 1418 || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 5067385 gcagctggcttattccggctgctcaaatctttggagtgaagaaa 5067428 Score = 125 bits (63), Expect = 6e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 681 caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 740 ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| ||| Sbjct: 5064675 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 5064734 Query: 741 atcatggggaagattgggtccccaatggata 771 ||||||||||||||||||||| ||||||||| Sbjct: 5064735 atcatggggaagattgggtccgcaatggata 5064765 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Plus Query: 178 cgcccgctagccgacgttgtagccgacttcctcgtgcgcttcccccgcgagcgccgcctc 237 |||||||| |||||| | | ||||||||||||| ||| ||||||| ||||||||||||| Sbjct: 5060228 cgcccgctcgccgacatcgccgccgacttcctcgcgcggttccccctcgagcgccgcctc 5060287 Query: 238 cgcgtcggcgctacgctctgcttcctcctagagg 271 ||||||||||| ||||| | |||||||| |||| Sbjct: 5060288 cgcgtcggcgccgcgctcgggttcctcctcgagg 5060321 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 376 gcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaacttttgttgact 435 ||||| ||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||| Sbjct: 5064057 gcagcctgtgatgaaacatcagaaaaatcggaacgggcatttgtccaacttttgttgact 5064116 Query: 436 tc 437 || Sbjct: 5064117 tc 5064118 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 604 actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 663 |||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||| Sbjct: 5064489 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 5064548 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 269 aggacaagaaaatgcttcatccaaccggtcgtctaattgcatttgcaattcttcatcaga 328 |||||||||| ||||||||||| || ||||| | ||||||||||| |||||||| |||| Sbjct: 5062253 aggacaagaagatgcttcatcctactggtcggttgattgcatttgctattcttcaccaga 5062312 Query: 329 gctattcctc 338 | |||||||| Sbjct: 5062313 gttattcctc 5062322 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 1021 gaccttgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactct 1080 ||||||||||| || ||||||||||||||||| || |||||||||| | ||||||||| Sbjct: 5065454 gaccttgttgaacacaatccactcattgctgttgaaattctttcgaaattgatgaactct 5065513 Query: 1081 ccggacattg 1090 || ||||||| Sbjct: 5065514 cctgacattg 5065523 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1235 aggataagtacatgcagaacagactggtgagattggtttgtgttttcctccagagcctca 1294 ||||||| |||||||||||||| |||||||| | |||||||||||||| ||| |||| Sbjct: 5066394 aggataaatacatgcagaacaggttggtgagactagtttgtgttttccttcagtctctca 5066453 Query: 1295 tccgaaa 1301 ||||||| Sbjct: 5066454 tccgaaa 5066460 Score = 50.1 bits (25), Expect = 0.030 Identities = 40/45 (88%) Strand = Plus / Plus Query: 473 agtcagctgtagattacgtaaatgagcctgtttctgcatcacagg 517 ||||||||||||||||| |||||| | ||| ||||||||| |||| Sbjct: 5064275 agtcagctgtagattacataaatgggtctgattctgcatctcagg 5064319
>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112231 Score = 151 bits (76), Expect = 1e-32 Identities = 121/136 (88%) Strand = Plus / Plus Query: 1102 gatgttcttgtgcacatggagatgagcctacattcgatggaagttgtaaacagacttact 1161 |||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 36275 gatgttcttgtgcatatggagatgagcctgcattctatggaagttgtaaacaggcttact 36334 Query: 1162 actgcggttgaactcccgacaggatttgtccacgaatacatctcaaattgtattcaatca 1221 ||||| || ||||||||||||| |||||||| || |||||||| ||||| || |||||| Sbjct: 36335 actgctgtagaactcccgacagagtttgtccatgagtacatctcgaattgcatccaatca 36394 Query: 1222 tgtcaaaacattaagg 1237 ||||| ||| |||||| Sbjct: 36395 tgtcagaacgttaagg 36410 Score = 135 bits (68), Expect = 7e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 809 agctacagtggctaaatcctgacaacactcatgagctattatgggattatagcatgtgtg 868 ||||||| ||| | || |||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 35542 agctacaatggttgaaccctgacaacaatcacgagctattatgggattatagcatgtgtg 35601 Query: 869 ctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaaaaggtcctc 928 ||||||| ||||| || ||||| || || ||||||||||| ||||||||||||||||| | Sbjct: 35602 ctgacacaagtcgaggtgctgctattcgagatttgattgcaagagccttaaaaggtccac 35661 Query: 929 ttgtacct 936 ||| |||| Sbjct: 35662 ttgcacct 35669 Score = 135 bits (68), Expect = 7e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 1315 gttcaagatcttttcattgaggtacaggcgttctgcatagagttctcacgaataagggaa 1374 |||||||| || ||||| |||||||| || |||||||| ||||||||||| ||||||||| Sbjct: 37978 gttcaagacctcttcatcgaggtacaagctttctgcattgagttctcacggataagggaa 38037 Query: 1375 gcggctggcttattccgtctgctcaaatctttggagtgaagaaa 1418 || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 38038 gcagctggcttattccggctgctcaaatctttggagtgaagaaa 38081 Score = 125 bits (63), Expect = 6e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 681 caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 740 ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| ||| Sbjct: 35328 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 35387 Query: 741 atcatggggaagattgggtccccaatggata 771 ||||||||||||||||||||| ||||||||| Sbjct: 35388 atcatggggaagattgggtccgcaatggata 35418 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Plus Query: 178 cgcccgctagccgacgttgtagccgacttcctcgtgcgcttcccccgcgagcgccgcctc 237 |||||||| |||||| | | ||||||||||||| ||| ||||||| ||||||||||||| Sbjct: 30881 cgcccgctcgccgacatcgccgccgacttcctcgcgcggttccccctcgagcgccgcctc 30940 Query: 238 cgcgtcggcgctacgctctgcttcctcctagagg 271 ||||||||||| ||||| | |||||||| |||| Sbjct: 30941 cgcgtcggcgccgcgctcgggttcctcctcgagg 30974 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 376 gcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaacttttgttgact 435 ||||| ||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||| Sbjct: 34710 gcagcctgtgatgaaacatcagaaaaatcggaacgggcatttgtccaacttttgttgact 34769 Query: 436 tc 437 || Sbjct: 34770 tc 34771 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 604 actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 663 |||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||| Sbjct: 35142 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 35201 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 269 aggacaagaaaatgcttcatccaaccggtcgtctaattgcatttgcaattcttcatcaga 328 |||||||||| ||||||||||| || ||||| | ||||||||||| |||||||| |||| Sbjct: 32906 aggacaagaagatgcttcatcctactggtcggttgattgcatttgctattcttcaccaga 32965 Query: 329 gctattcctc 338 | |||||||| Sbjct: 32966 gttattcctc 32975 Score = 67.9 bits (34), Expect = 1e-07 Identities = 61/70 (87%) Strand = Plus / Plus Query: 1021 gaccttgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactct 1080 ||||||||||| || ||||||||||||||||| || |||||||||| | ||||||||| Sbjct: 36107 gaccttgttgaacacaatccactcattgctgttgaaattctttcgaaattgatgaactct 36166 Query: 1081 ccggacattg 1090 || ||||||| Sbjct: 36167 cctgacattg 36176 Score = 61.9 bits (31), Expect = 8e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 1235 aggataagtacatgcagaacagactggtgagattggtttgtgttttcctccagagcctca 1294 ||||||| |||||||||||||| |||||||| | |||||||||||||| ||| |||| Sbjct: 37047 aggataaatacatgcagaacaggttggtgagactagtttgtgttttccttcagtctctca 37106 Query: 1295 tccgaaa 1301 ||||||| Sbjct: 37107 tccgaaa 37113 Score = 50.1 bits (25), Expect = 0.030 Identities = 40/45 (88%) Strand = Plus / Plus Query: 473 agtcagctgtagattacgtaaatgagcctgtttctgcatcacagg 517 ||||||||||||||||| |||||| | ||| ||||||||| |||| Sbjct: 34928 agtcagctgtagattacataaatgggtctgattctgcatctcagg 34972
>gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence Length = 1802 Score = 133 bits (67), Expect = 3e-27 Identities = 262/327 (80%) Strand = Plus / Plus Query: 969 gaaggactctaagctagtctatcactgtgggatgactccacagaaacttccagaccttgt 1028 |||||||| |||||||| ||||| ||||| ||||| |||||||| || || || ||||| Sbjct: 902 gaaggactggaagctagtttatcattgtggaatgacaccacagaagctccctgatcttgt 961 Query: 1029 tgagcataatccactcattgctgtagagcttctttcgaagcttatgaactctccggacat 1088 ||| |||||||||| || ||||| || ||||||| ||||| || |||||||||||||| Sbjct: 962 tgaacataatccacatatagctgttgaagttctttcaaagctaatcaactctccggacat 1021 Query: 1089 tgcaggttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgt 1148 | | || ||||||| | |||| || ||||| |||||| | ||||| |||||||| || Sbjct: 1022 ggatgcgtactttgatgctattgttcatatggatatgagcttgcattcaatggaagtagt 1081 Query: 1149 aaacagacttactactgcggttgaactcccgacaggatttgtccacgaatacatctcaaa 1208 ||| | || |||||||| || | | || |||||||||| || || || |||||||| Sbjct: 1082 aaatcggctcactactgcagtagttttaccaccaggatttgttcatgactatatctcaaa 1141 Query: 1209 ttgtattcaatcatgtcaaaacattaaggataagtacatgcagaacagactggtgagatt 1268 ||||||| ||||||| || |||||||||| ||||| ||||| || ||||| |||||| | Sbjct: 1142 ctgtattcgatcatgtgaagacattaaggacaagtatatgcaaaatagactagtgagact 1201 Query: 1269 ggtttgtgttttcctccagagcctcat 1295 || |||||||| || ||||||||||| Sbjct: 1202 agtatgtgtttttctacagagcctcat 1228 Score = 46.1 bits (23), Expect = 0.47 Identities = 101/127 (79%) Strand = Plus / Plus Query: 305 ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 364 |||||||||||||||| ||||| | |||||||||||| | |||||| | | |||||| Sbjct: 261 ttgcatttgcaattctacatcaaggttattcctcacagttggcaaatccatttcttcctc 320 Query: 365 tgctgttaaatgcagcttgtgatgaatcatcagataaatcagaacgagcatttgtccaac 424 | | ||||||| || ||||||||| | || || || |||||| ||||||| |||||| Sbjct: 321 ttttaataaatgctgcatgtgatgaaacttctgaggaagcagaacaagcatttctccaac 380 Query: 425 ttttgtt 431 || |||| Sbjct: 381 ttctgtt 387
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 127 bits (64), Expect = 2e-25 Identities = 124/144 (86%) Strand = Plus / Minus Query: 1094 gttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgtaaaca 1153 |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 26477 gttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagttgtaaaca 26418 Query: 1154 gacttactactgcggttgaactcccgacaggatttgtccacgaatacatctcaaattgta 1213 | || ||||| || || || || || ||||||| | || || ||||||||||| |||| Sbjct: 26417 ggctcactacagcagtagatctaccaccaggattcattcatgactacatctcaaactgta 26358 Query: 1214 ttcaatcatgtcaaaacattaagg 1237 ||| |||||||||||||||||||| Sbjct: 26357 ttcgatcatgtcaaaacattaagg 26334 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Minus Query: 1318 caagatcttttcattgaggtacaggcgttctgcatagagttctcacgaataagggaagcg 1377 |||||||| ||||| |||||||||||||||||||| | ||| || |||||||| |||||| Sbjct: 24821 caagatctcttcatcgaggtacaggcgttctgcattgcgttttcccgaataagagaagcg 24762 Query: 1378 gctgg 1382 ||||| Sbjct: 24761 gctgg 24757 Score = 50.1 bits (25), Expect = 0.030 Identities = 46/53 (86%) Strand = Plus / Minus Query: 961 gaattggtgaaggactctaagctagtctatcactgtgggatgactccacagaa 1013 ||||||| ||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 26792 gaattggcaaaggactggaagctagtttatcattgtgggatgacaccacagaa 26740 Score = 44.1 bits (22), Expect = 1.8 Identities = 52/62 (83%) Strand = Plus / Minus Query: 841 gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 900 |||||||| ||||| ||| ||||||||||| || ||||| || ||||||||||| ||| Sbjct: 34968 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 34909 Query: 901 tt 902 || Sbjct: 34908 tt 34907 Score = 44.1 bits (22), Expect = 1.8 Identities = 49/58 (84%) Strand = Plus / Minus Query: 587 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 644 ||||||||||| |||||||||||| ||| ||| || ||||||||||| ||||||| Sbjct: 35390 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 35333 Score = 42.1 bits (21), Expect = 7.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 305 ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 364 ||||||| ||||||||||||| | |||||||||||| | |||||||| |||||||| Sbjct: 38199 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 38140 Query: 365 t 365 | Sbjct: 38139 t 38139
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 127 bits (64), Expect = 2e-25 Identities = 124/144 (86%) Strand = Plus / Plus Query: 1094 gttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgtaaaca 1153 |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 7444321 gttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagttgtaaaca 7444380 Query: 1154 gacttactactgcggttgaactcccgacaggatttgtccacgaatacatctcaaattgta 1213 | || ||||| || || || || || ||||||| | || || ||||||||||| |||| Sbjct: 7444381 ggctcactacagcagtagatctaccaccaggattcattcatgactacatctcaaactgta 7444440 Query: 1214 ttcaatcatgtcaaaacattaagg 1237 ||| |||||||||||||||||||| Sbjct: 7444441 ttcgatcatgtcaaaacattaagg 7444464 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1318 caagatcttttcattgaggtacaggcgttctgcatagagttctcacgaataagggaagcg 1377 |||||||| ||||| |||||||||||||||||||| | ||| || |||||||| |||||| Sbjct: 7445977 caagatctcttcatcgaggtacaggcgttctgcattgcgttttcccgaataagagaagcg 7446036 Query: 1378 gctgg 1382 ||||| Sbjct: 7446037 gctgg 7446041 Score = 50.1 bits (25), Expect = 0.030 Identities = 46/53 (86%) Strand = Plus / Plus Query: 961 gaattggtgaaggactctaagctagtctatcactgtgggatgactccacagaa 1013 ||||||| ||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 7444006 gaattggcaaaggactggaagctagtttatcattgtgggatgacaccacagaa 7444058 Score = 44.1 bits (22), Expect = 1.8 Identities = 49/58 (84%) Strand = Plus / Plus Query: 587 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 644 ||||||||||| |||||||||||| ||| ||| || ||||||||||| ||||||| Sbjct: 7435408 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 7435465 Score = 44.1 bits (22), Expect = 1.8 Identities = 52/62 (83%) Strand = Plus / Plus Query: 841 gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 900 |||||||| ||||| ||| ||||||||||| || ||||| || ||||||||||| ||| Sbjct: 7435830 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 7435889 Query: 901 tt 902 || Sbjct: 7435890 tt 7435891 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 69 ctcgccgccgaccaccgccacggcga 94 |||||||| ||||||||||||||||| Sbjct: 24568150 ctcgccgctgaccaccgccacggcga 24568125 Score = 42.1 bits (21), Expect = 7.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 305 ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 364 ||||||| ||||||||||||| | |||||||||||| | |||||||| |||||||| Sbjct: 7432599 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 7432658 Query: 365 t 365 | Sbjct: 7432659 t 7432659
>gb|BT013686.1| Lycopersicon esculentum clone 132509R, mRNA sequence Length = 1534 Score = 77.8 bits (39), Expect = 1e-10 Identities = 111/135 (82%) Strand = Plus / Plus Query: 1228 aacattaaggataagtacatgcagaacagactggtgagattggtttgtgttttcctccag 1287 ||||| ||||||| || ||||| |||||||| || ||| |||| ||||||||||| ||| Sbjct: 1164 aacatcaaggatagatatatgcaaaacagactagtaagactggtctgtgttttcctacag 1223 Query: 1288 agcctcatccgaaatcaaattattaacgttcaagatcttttcattgaggtacaggcgttc 1347 ||| | ||||| ||| | || || || || |||||||| |||||||| |||||||| || Sbjct: 1224 agcttgatccggaataagatcatcaatgtccaagatctgttcattgaagtacaggcattt 1283 Query: 1348 tgcatagagttctca 1362 ||||| ||||||||| Sbjct: 1284 tgcattgagttctca 1298 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 898 gatttgattgcgagagccttaaaaggtcctcttgtacctgctcaacaggagcaagt 953 ||||||||||| | ||| |||||||||| ||||||||||||||||| |||||||| Sbjct: 834 gatttgattgcaaaagctctaaaaggtccacttgtacctgctcaacaagagcaagt 889 Score = 44.1 bits (22), Expect = 1.8 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1117 atggagatgagcctacattcgatggaagttgtaaacag 1154 ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 1053 atggagatgagtcttcattctatggaagttgttaacag 1090
>dbj|AK236147.1| Sus scrofa mRNA, clone:OVRM10157G04, expressed in ovary Length = 1985 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1130 tacattcgatggaagttgtaaacagacttactactgcggttga 1172 ||||||| ||||||||||||||| |||||||||| || ||||| Sbjct: 831 tacattcaatggaagttgtaaaccgacttactacagctgttga 873
>emb|CU025000.1| Xenopus tropicalis finished cDNA, clone TGas140l07 Length = 1723 Score = 50.1 bits (25), Expect = 0.030 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1231 attaaggataagtacatgcagaacagactggtgagattggtttgtgttttcctccag 1287 |||||||| ||||| |||||||| | ||||| |||| |||||||||||||||||| Sbjct: 1159 attaaggacaagtatatgcagaatcgtttggtgcgattagtttgtgttttcctccag 1215 Score = 46.1 bits (23), Expect = 0.47 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1130 tacattcgatggaagttgtaaacagacttac 1160 ||||||| |||||||||||||| |||||||| Sbjct: 1058 tacattcaatggaagttgtaaatagacttac 1088
>ref|XM_001180951.1| PREDICTED: Strongylocentrotus purpuratus similar to C2orf29 protein (LOC594372), mRNA Length = 1392 Score = 46.1 bits (23), Expect = 0.47 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1246 atgcagaacagactggtgagattggtttgtgtttt 1280 ||||||||||||||||| ||| |||| |||||||| Sbjct: 1156 atgcagaacagactggtcagactggtgtgtgtttt 1190
>ref|XM_793815.2| PREDICTED: Strongylocentrotus purpuratus similar to C2orf29 protein (LOC594372), mRNA Length = 1392 Score = 46.1 bits (23), Expect = 0.47 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1246 atgcagaacagactggtgagattggtttgtgtttt 1280 ||||||||||||||||| ||| |||| |||||||| Sbjct: 1156 atgcagaacagactggtcagactggtgtgtgtttt 1190
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.47 Identities = 29/31 (93%) Strand = Plus / Minus Query: 69 ctcgccgccgaccaccgccacggcgacggcc 99 |||||| |||||||| ||||||||||||||| Sbjct: 2154563 ctcgcctccgaccacagccacggcgacggcc 2154533
>gb|AY180177.1| Mus musculus KIS kinase (Kis) gene, exons 1 through 8 and complete cds Length = 100207 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 agaggacaagaaaatgcttcatc 289 ||||||||||||||||||||||| Sbjct: 51755 agaggacaagaaaatgcttcatc 51777
>emb|BX830256.1|CNS0A26P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 46.1 bits (23), Expect = 0.47 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1117 atggagatgagcctacattcgatggaagttgtaaacagacttactactgcggttgaact 1175 ||||| |||||||| |||| ||||||||||| || || || |||||||| |||||||| Sbjct: 1056 atggacatgagcctgtattcaatggaagttgtgaataggctcactactgcagttgaact 1114
>emb|AL844198.7| Mouse DNA sequence from clone RP23-438P13 on chromosome 4, complete sequence Length = 176049 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1708 ctatctgtggttggtctacattt 1730 ||||||||||||||||||||||| Sbjct: 78894 ctatctgtggttggtctacattt 78916
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 46.1 bits (23), Expect = 0.47 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1006 ccacagaaacttccagaccttgt 1028 ||||||||||||||||||||||| Sbjct: 143873 ccacagaaacttccagaccttgt 143895
>ref|NM_001074885.1| Oryza sativa (japonica cultivar-group) Os11g0641500 (Os11g0641500) mRNA, complete cds Length = 2065 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 69 ctcgccgccgaccaccgccacggcga 94 |||||||| ||||||||||||||||| Sbjct: 163 ctcgccgctgaccaccgccacggcga 138
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccacggcgacggccatg 102 |||||||||||||||||||||| Sbjct: 2616873 caccgccacggcgacggccatg 2616894
>ref|XM_582695.2| PREDICTED: Bos taurus similar to Protein C2orf29 (LOC506268), partial mRNA Length = 1881 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1130 tacattcgatggaagttgtaaa 1151 |||||||||||||||||||||| Sbjct: 840 tacattcgatggaagttgtaaa 861
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 69 ctcgccgccgaccaccgccacggcga 94 |||||||| ||||||||||||||||| Sbjct: 45052 ctcgccgctgaccaccgccacggcga 45027
>gb|AC112778.7| Homo sapiens X BAC RP11-629O4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 83295 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 aaaacccaaaactgcaaaaatc 69 |||||||||||||||||||||| Sbjct: 15666 aaaacccaaaactgcaaaaatc 15687
>gb|AC112919.5| Homo sapiens X BAC RP11-294J19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82410 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 aaaacccaaaactgcaaaaatc 69 |||||||||||||||||||||| Sbjct: 74741 aaaacccaaaactgcaaaaatc 74762
>gb|AC068933.11| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence Length = 183437 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 aaaacccaaaactgcaaaaatc 69 |||||||||||||||||||||| Sbjct: 157093 aaaacccaaaactgcaaaaatc 157114
>emb|AL645730.10| Human DNA sequence from clone RP11-93G23 on chromosome 1 Contains the 5' end of a the gene for a novel protein and a pseudogene similar to part of NADH dehydrogenase 2 (MTND2), complete sequence Length = 153702 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1806 taatcggaacaatacctgatctgttt 1831 |||||||||| ||||||||||||||| Sbjct: 88403 taatcggaactatacctgatctgttt 88378
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 44.1 bits (22), Expect = 1.8 Identities = 52/62 (83%) Strand = Plus / Minus Query: 841 gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 900 |||||||| ||||| ||| ||||||||||| || ||||| || ||||||||||| ||| Sbjct: 3648 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 3589 Query: 901 tt 902 || Sbjct: 3588 tt 3587 Score = 44.1 bits (22), Expect = 1.8 Identities = 49/58 (84%) Strand = Plus / Minus Query: 587 gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 644 ||||||||||| |||||||||||| ||| ||| || ||||||||||| ||||||| Sbjct: 4070 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 4013 Score = 42.1 bits (21), Expect = 7.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 305 ttgcatttgcaattcttcatcagagctattcctcacagccagtaaatccctatgttcctc 364 ||||||| ||||||||||||| | |||||||||||| | |||||||| |||||||| Sbjct: 6879 ttgcattcacaattcttcatcaaggttattcctcacagttggaaaatccctttgttcctc 6820 Query: 365 t 365 | Sbjct: 6819 t 6819
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 77 cgaccaccgccacggcgacggccatg 102 ||||||| |||||||||||||||||| Sbjct: 8803419 cgaccacggccacggcgacggccatg 8803444
>gb|AC025756.4| Homo sapiens chromosome 5 clone CTD-2159L10, complete sequence Length = 97143 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 aaaacccaaaactgcaaaaatc 69 |||||||||||||||||||||| Sbjct: 28420 aaaacccaaaactgcaaaaatc 28441
>dbj|AK103094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118K21, full insert sequence Length = 2065 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 69 ctcgccgccgaccaccgccacggcga 94 |||||||| ||||||||||||||||| Sbjct: 164 ctcgccgctgaccaccgccacggcga 139
>gb|AC091889.3| Homo sapiens chromosome 5 clone RP11-122F24, complete sequence Length = 154397 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 aaaacccaaaactgcaaaaatc 69 |||||||||||||||||||||| Sbjct: 113452 aaaacccaaaactgcaaaaatc 113473
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 tcgtgcgcttcccccgcgagcgccg 233 ||||||||||||| ||||||||||| Sbjct: 1896728 tcgtgcgcttcccgcgcgagcgccg 1896752
>ref|XM_717252.1| Candida albicans SC5314 hypothetical protein (CaO19_12496), mRNA Length = 1638 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 acaagaaaatgcttcatccaa 292 ||||||||||||||||||||| Sbjct: 1452 acaagaaaatgcttcatccaa 1432
>ref|XM_717138.1| Candida albicans SC5314 hypothetical protein (CaO19_5029), mRNA Length = 1638 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 acaagaaaatgcttcatccaa 292 ||||||||||||||||||||| Sbjct: 1452 acaagaaaatgcttcatccaa 1432
>gb|AE002154.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 55 of 59 of the complete genome Length = 19497 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 taattgcatttgcaattcttc 322 ||||||||||||||||||||| Sbjct: 117 taattgcatttgcaattcttc 137
>ref|XM_538455.2| PREDICTED: Canis familiaris similar to Protein C2orf29 (LOC481334), mRNA Length = 2433 Score = 42.1 bits (21), Expect = 7.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1132 cattcgatggaagttgtaaacagacttactactgcggttga 1172 ||||| |||||||||||||| |||| |||||||| ||||| Sbjct: 1237 cattcaatggaagttgtaaatcgactaactactgctgttga 1277
>gb|AC007091.3| Homo sapiens BAC clone RP11-71F18 from 7, complete sequence Length = 174327 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1486 aaatactctgtttttcctcaa 1506 ||||||||||||||||||||| Sbjct: 20511 aaatactctgtttttcctcaa 20491
>gb|AC157546.7| Mus musculus chromosome 19, clone RP23-325I11, complete sequence Length = 173513 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gacaagaaaatgcttcatcca 291 ||||||||||||||||||||| Sbjct: 35850 gacaagaaaatgcttcatcca 35830
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 cgagcgccgcctccgcgtcggcgct 249 ||||||||||| ||||||||||||| Sbjct: 4736061 cgagcgccgccgccgcgtcggcgct 4736037
>gb|AC087886.11| Homo sapiens 12 BAC RP11-578A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191923 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ctaattgcatttgcaattctt 321 ||||||||||||||||||||| Sbjct: 188827 ctaattgcatttgcaattctt 188847
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccgccgaccaccgccacggcg 93 ||||||||||||||||||||| Sbjct: 20048144 ccgccgaccaccgccacggcg 20048124
>emb|AL139237.30| Human DNA sequence from clone RP11-168P8 on chromosome 10 Contains the 3'end of a novel gene and parts of five novel genes, complete sequence Length = 120802 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ggcaggcctccttgcgctgct 164 ||||||||||||||||||||| Sbjct: 84614 ggcaggcctccttgcgctgct 84634
>gb|AC016256.19| Homo sapiens 12 BAC RP11-98E6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164405 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ctaattgcatttgcaattctt 321 ||||||||||||||||||||| Sbjct: 2070 ctaattgcatttgcaattctt 2090
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cccgcgagcgccgcctccgcgtcgg 245 ||||||||||||||||||| ||||| Sbjct: 265907 cccgcgagcgccgcctccgggtcgg 265931
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccgccgaccaccgccacggcg 93 ||||||||||||||||||||| Sbjct: 119995 ccgccgaccaccgccacggcg 119975
>emb|BX255895.6| Zebrafish DNA sequence from clone CH211-241M14 in linkage group 6, complete sequence Length = 159627 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 agcttgtgatgaatcatcagataaa 402 |||||||||||||||||||| |||| Sbjct: 129740 agcttgtgatgaatcatcagctaaa 129716
>gb|AC139329.3| Mus musculus BAC clone RP24-317B10 from 17, complete sequence Length = 139190 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1853 ttcaaccaggatattgtgttt 1873 ||||||||||||||||||||| Sbjct: 65091 ttcaaccaggatattgtgttt 65111
>gb|AY108636.1| Zea mays PCO138259 mRNA sequence Length = 1312 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cgagaggggaaaacccaaaac 59 ||||||||||||||||||||| Sbjct: 56 cgagaggggaaaacccaaaac 76
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 ccaccgccacggcgacggcca 100 ||||||||||||||||||||| Sbjct: 4689360 ccaccgccacggcgacggcca 4689340
>gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, complete sequence Length = 176325 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gacaagaaaatgcttcatcca 291 ||||||||||||||||||||| Sbjct: 23613 gacaagaaaatgcttcatcca 23633
>emb|AL929533.12| Zebrafish DNA sequence from clone DKEY-18E17 in linkage group 5, complete sequence Length = 251370 Score = 42.1 bits (21), Expect = 7.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 agaggggaaaacccaaaactgcaaa 65 ||||||||||| ||||||||||||| Sbjct: 97719 agaggggaaaagccaaaactgcaaa 97743
>emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomic region of the paromomycin biosynthesis gene cluster, strain NRRL 2455 Length = 48169 Score = 42.1 bits (21), Expect = 7.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 agcgccgcctccgcgtcggcg 247 ||||||||||||||||||||| Sbjct: 34080 agcgccgcctccgcgtcggcg 34060 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 335,427,852 Number of extensions: 17587623 Number of successful extensions: 365632 Number of sequences better than 10.0: 55 Number of HSP's gapped: 365612 Number of HSP's successfully gapped: 103 Length of query: 1909 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1886 Effective length of database: 18,503,978,556 Effective search space: 34898503556616 Effective search space used: 34898503556616 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
