ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf146h09 |
|---|---|
| Clone Library Name | barley_pub |
>P10478:XYNZ_CLOTH Endo-1,4-beta-xylanase Z precursor - Clostridium thermocellum (strain| ATCC 27405 / DSM 1237) Length = 837 Score = 107 bits (267), Expect = 2e-22 Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 19/249 (7%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVK- 1075 F+ V E+E+K+ + +P + F DQ+LAF + + +RGH + W NQ+ P W+ Sbjct: 553 FSMVVCENEMKFDALQPRQNVFDFSKGDQLLAFAERNGMQMRGHTLIWHNQN--PSWLTN 610 Query: 1076 -GLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEM-------LHFNFYEQRLGPNATMD 1231 + + L + + I ++MT Y+G+ WDV NE L + + +G + Sbjct: 611 GNWNRDSLLAVMKNHITTVMTHYKGKIVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDY 670 Query: 1232 FFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGHFSK 1411 F A++ADP A LF N+YN+ +D +A +K ++ G ++G+G + HF Sbjct: 671 AFRYAREADPDALLFYNDYNI----EDLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFIN 726 Query: 1412 PNIPYMRAVLD----KLATLNLPIWFTEIDI------NNKFDAQTQAVYLEQVLREAYAH 1561 P A +D + A + + + FTEIDI N Q QA +++++ A+ Sbjct: 727 GMSPEYLASIDQNIKRYAEIGVIVSFTEIDIRIPQSENPATAFQVQANNYKELMKICLAN 786 Query: 1562 PAVSGVMLW 1588 P + ++W Sbjct: 787 PNCNTFVMW 795
>P56588:XYNA_PENSI Endo-1,4-beta-xylanase - Penicillium simplicissimum| Length = 302 Score = 101 bits (252), Expect = 1e-20 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 9/227 (3%) Frame = +2 Query: 839 VGDRLHHPGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVM 1018 +GD+ + P +++ F E+ +KW +TEP G F D ++ F +S+ + Sbjct: 21 IGDQYTLTKNTKNPAIIKADFGQLTPENSMKWDATEPNRGQFTFSGSDYLVNFAQSNGKL 80 Query: 1019 VRGHNIFWENQDATPRWVKGLSPED-LRSAVNTRIQSLMTRYRGEFAHWDVNNEM----- 1180 +RGH + W +Q P WV ++ ++ L S + I ++MTRY+G+ WDV NE+ Sbjct: 81 IRGHTLVWHSQ--LPGWVSSITDKNTLISVLKNHITTVMTRYKGKIYAWDVLNEIFNEDG 138 Query: 1181 -LHFNFYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDAS-STVDAYVARLKD 1354 L + + +G + F A+ DP A L++N+YN+ D A S V+ V+ +K Sbjct: 139 SLRNSVFYNVIGEDYVRIAFETARSVDPNAKLYINDYNL----DSAGYSKVNGMVSHVKK 194 Query: 1355 LRAGGAVLEGIGLEGHFSKPNIPYMRAVLDKLATLNL-PIWFTEIDI 1492 A G ++GIG + H + L+ LA+ I TE+DI Sbjct: 195 WLAAGIPIDGIGSQTHLGAGAGSAVAGALNALASAGTKEIAITELDI 241
>P46239:GUNF_FUSOX Putative endoglucanase type F precursor - Fusarium oxysporum| Length = 385 Score = 101 bits (252), Expect = 1e-20 Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 13/258 (5%) Frame = +2 Query: 854 HHPGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHN 1033 +H + +V+ F E+ +KW + EP+ F D+++ F + ++RGH Sbjct: 103 YHLNNNPLINIVKAQFGQVTCENSMKWDAIEPSRNSFTFSNADKVVDFATQNGKLIRGHT 162 Query: 1034 IFWENQDATPRWVKGLSPED-LRSAVNTRIQSLMTRYRGEFAHWD-VNNEM------LHF 1189 + W +Q P+WV+ ++ L + + +++++TRY+G+ WD VNNE+ L Sbjct: 163 LLWHSQ--LPQWVQNINDRSTLTAVIENHVKTMVTRYKGKILQWDVVNNEIFAEDGNLRD 220 Query: 1190 NFYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGG 1369 + + + LG + F A+ ADP A L++N+YN+ ++ D + VA + A G Sbjct: 221 SVFSRVLGEDFVGIAFRAARAADPAAKLYINDYNLDKS--DYAKVTRGMVAHVNKWIAAG 278 Query: 1370 AVLEGIGLEGHFSKPN----IPYMRAVLDKLATLNL-PIWFTEIDINNKFDAQTQAVYLE 1534 ++GIG +GH + P+ + A L LA + I TE+DI A A Sbjct: 279 IPIDGIGSQGHLAAPSGWNPASGVPAALRALAASDAKEIAITELDI-----AGASANDYL 333 Query: 1535 QVLREAYAHPAVSGVMLW 1588 V+ A P G+ +W Sbjct: 334 TVMNACLAVPKCVGITVW 351
>P33559:XYNA_ASPKA Endo-1,4-beta-xylanase A precursor - Aspergillus kawachi (Aspergillus| awamori var. kawachi) Length = 327 Score = 100 bits (250), Expect = 2e-20 Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 9/259 (3%) Frame = +2 Query: 839 VGDRLHHPGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVM 1018 +GD+ + P +++ F A E+ +KW +TEP+ G F D ++ F +S+ + Sbjct: 46 IGDQYTLTKNSKTPAVIKADFGALTPENSMKWDATEPSRGQFSFSGSDYLVNFAQSNNKL 105 Query: 1019 VRGHNIFWENQDATPRWVKGLSPED-LRSAVNTRIQSLMTRYRGEFAHWDVNNEM----- 1180 +RGH + W +Q P WV+ ++ ++ L + I ++M Y+G+ WDV NE+ Sbjct: 106 IRGHTLVWHSQ--LPSWVQAITDKNTLIEVMKNHITTVMQHYKGKIYAWDVVNEIFNEDG 163 Query: 1181 -LHFNFYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDAS-STVDAYVARLKD 1354 L + + + +G + F A+ ADP A L++N+YN+ D AS + V+ +K Sbjct: 164 SLRDSVFYKVIGDDYVRIAFETARAADPNAKLYINDYNL----DSASYPKLAGMVSHVKK 219 Query: 1355 LRAGGAVLEGIGLEGHFSKPNIPYMRAVLDKLATLNL-PIWFTEIDINNKFDAQTQAVYL 1531 G ++GIG + H S + L+ LA I TE+DI A + Sbjct: 220 WIEAGIPIDGIGSQTHLSAGGGAGISGALNALAGAGTKEIAVTELDI-----AGASSTDY 274 Query: 1532 EQVLREAYAHPAVSGVMLW 1588 +V+ P G+ +W Sbjct: 275 VEVVEACLDQPKCIGITVW 293
>P23360:XYNA_THEAU Endo-1,4-beta-xylanase precursor - Thermoascus aurantiacus| Length = 329 Score = 100 bits (249), Expect = 2e-20 Identities = 65/212 (30%), Positives = 107/212 (50%), Gaps = 9/212 (4%) Frame = +2 Query: 884 MVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATP 1063 +++ F E+ +KW +TEP+ G F D ++ + + + ++RGH + W +Q P Sbjct: 61 IIQADFGQVTPENSMKWDATEPSQGNFNFAGADYLVNWAQQNGKLIRGHTLVWHSQ--LP 118 Query: 1064 RWVKGLSPED-LRSAVNTRIQSLMTRYRGEFAHWDVNNE------MLHFNFYEQRLGPNA 1222 WV ++ ++ L + + I +LMTRY+G+ WDV NE L + +G + Sbjct: 119 SWVSSITDKNTLTNVMKNHITTLMTRYKGKIRAWDVVNEAFNEDGSLRQTVFLNVIGEDY 178 Query: 1223 TMDFFSVAQDADPLATLFMNEYNVVETCDDAS-STVDAYVARLKDLRAGGAVLEGIGLEG 1399 F A+ ADP A L++N+YN+ D AS A V R+K RA G ++GIG + Sbjct: 179 IPIAFQTARAADPNAKLYINDYNL----DSASYPKTQAIVNRVKQWRAAGVPIDGIGSQT 234 Query: 1400 HFSKPNIPYMRAVLDKLATLNLP-IWFTEIDI 1492 H S + L LA+ P + TE+D+ Sbjct: 235 HLSAGQGAGVLQALPLLASAGTPEVAITELDV 266
>P36917:XYNA_THESA Endo-1,4-beta-xylanase A precursor - Thermoanaerobacter| saccharolyticum Length = 1157 Score = 99.8 bits (247), Expect = 4e-20 Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 21/230 (9%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWV-- 1072 FN V E+ +K S +P G FD D+++ + +H + +RGH + W NQ P W Sbjct: 391 FNMLVAENAMKPESLQPTEGNFTFDNADKIVDYAIAHNMKMRGHTLLWHNQ--VPDWFFQ 448 Query: 1073 ------KGLSPEDLRSAVNTRIQSLMTRYRGEFAH------WDVNNEMLHFN------FY 1198 K S + L + T I +++ ++ ++ WDV NE+L N + Sbjct: 449 DPSDPSKSASRDLLLQRLKTHITTVLDHFKTKYGSQNPIIGWDVVNEVLDDNGNLRNSKW 508 Query: 1199 EQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVL 1378 Q +GP+ F A +ADP LF+N+YN+ ++ A +K L++ G + Sbjct: 509 LQIIGPDYIEKAFEYAHEADPSMKLFINDYNI----ENNGVKTQAMYDLVKKLKSEGVPI 564 Query: 1379 EGIGLEGHFS-KPNIPYMRAVLDKLATLNLPIWFTEIDINNKFDAQTQAV 1525 +GIG++ H + NI ++A ++KLA+L + I TE+D+N + +A+ Sbjct: 565 DGIGMQMHININSNIDNIKASIEKLASLGVEIQVTELDMNMNGNISNEAL 614
>P07986:GUX_CELFI Exoglucanase/xylanase precursor [Includes: Exoglucanase -| Cellulomonas fimi Length = 484 Score = 99.8 bits (247), Expect = 4e-20 Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 13/243 (5%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVKG 1078 FN V E+ +KW +TEP+ F D++ ++ + GH + W +Q P W K Sbjct: 78 FNLVVAENAMKWDATEPSQNSFSFGAGDRVASYAADTGKELYGHTLVWHSQ--LPDWAKN 135 Query: 1079 LSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEML-------HFNFYEQRLGPNATMDFF 1237 L+ SA+ + + + G+ A WDV NE + ++Q+LG F Sbjct: 136 LNGSAFESAMVNHVTKVADHFEGKVASWDVVNEAFADGDGPPQDSAFQQKLGNGYIETAF 195 Query: 1238 SVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGHFSKPN 1417 A+ ADP A L +N+YNV ++S D +KD +A G L+ +G + H Sbjct: 196 RAARAADPTAKLCINDYNVEGINAKSNSLYDL----VKDFKARGVPLDCVGFQSHLIVGQ 251 Query: 1418 IP-YMRAVLDKLATLNLPIWFTEIDINNKFDAQ-----TQAVYLEQVLREAYAHPAVSGV 1579 +P R L + A L + + TE+DI + + TQA ++V++ GV Sbjct: 252 VPGDFRQNLQRFADLGVDVRITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGV 311 Query: 1580 MLW 1588 +W Sbjct: 312 TVW 314
>P38535:XYNX_CLOTM Exoglucanase xynX precursor - Clostridium thermocellum| Length = 1087 Score = 99.4 bits (246), Expect = 5e-20 Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 19/228 (8%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQ--------- 1051 FN V E+ +K S +P G FD D+++ + +H + +RGH + W NQ Sbjct: 243 FNMLVAENAMKPESLQPTEGNFTFDNADRIVDYAIAHNMKMRGHTLLWHNQVPDWFFQDP 302 Query: 1052 -DATPRWVKGLSPEDLRSAVNTRIQSLMTRY--RGEFAHWDVNNEMLHFN------FYEQ 1204 D T + L + L++ + T + T+Y + WDV NE+L N + Q Sbjct: 303 SDPTKPASRDLLLQRLKTHITTVLDHFKTKYGAQNPIIGWDVVNEVLDDNGSLRNSKWLQ 362 Query: 1205 RLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEG 1384 +GP+ F A +ADP LF+N+YN+ ++ A +K L++ G + G Sbjct: 363 IIGPDYIEKAFEYAHEADPSMKLFINDYNI----ENNGVKTQAMYDLVKKLKSEGVPISG 418 Query: 1385 IGLEGHFS-KPNIPYMRAVLDKLATLNLPIWFTEIDINNKFDAQTQAV 1525 IG++ H + NI ++A ++KLA+L + I TE+D+N + +A+ Sbjct: 419 IGMQMHININSNIDNIKASIEKLASLGVEIQVTELDMNMNGNVSNEAL 466
>P29417:XYNA_PENCH Endo-1,4-beta-xylanase precursor - Penicillium chrysogenum| (Penicillium notatum) Length = 353 Score = 99.4 bits (246), Expect = 5e-20 Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%) Frame = +2 Query: 863 GKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFW 1042 G + P +++ F E+ +KW +TEP+ G F D + F ++ ++RGH + W Sbjct: 58 GNPKTPAIIKANFGQLSPENSMKWDATEPSQGQFSFAGSDYFVEFAETNGKLIRGHTLVW 117 Query: 1043 ENQDATPRWVKGLSPE-DLRSAVNTRIQSLMTRYRGEFAHWDVNNEM------LHFNFYE 1201 +Q P WV ++ + L + I ++M +Y+G+ WDV NE+ L + + Sbjct: 118 HSQ--LPSWVSSITDKTTLTDVMKNHITTVMKQYKGKLYAWDVVNEIFEEDGTLRDSVFS 175 Query: 1202 QRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASST-VDAYVARLKDLRAGGAVL 1378 + LG + F A++ADP A L++N+YN+ D A+S + V+ +K A G + Sbjct: 176 RVLGEDFVRIAFETAREADPEAKLYINDYNL----DSATSAKLQGMVSHVKKWIAAGVPI 231 Query: 1379 EGIGLEGHFSKPNIPYMRAVLDKLATLNL-PIWFTEIDINNKFDAQTQAVYLEQVLREAY 1555 +GIG + H L+ LA+ + TE+DI T Y++ V+ Sbjct: 232 DGIGSQTHLGAGAGAAASGALNALASAGTEEVAVTELDI----AGATSTDYVD-VVNACL 286 Query: 1556 AHPAVSGVMLW 1588 P G+ +W Sbjct: 287 DQPKCVGITVW 297
>O59859:XYNA_ASPAC Endo-1,4-beta-xylanase precursor - Aspergillus aculeatus| Length = 327 Score = 95.5 bits (236), Expect = 8e-19 Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 9/259 (3%) Frame = +2 Query: 839 VGDRLHHPGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVM 1018 +GD+ + P +++ F E+ +KW +TEP G F D ++ F +S+ + Sbjct: 46 IGDQYTLNKNAKTPAIIKADFGQLTPENSMKWDATEPNRGQFSFSGSDYLVNFAQSNGKL 105 Query: 1019 VRGHNIFWENQDATPRWVKGLSPE-DLRSAVNTRIQSLMTRYRGEFAHWDVNNEM----- 1180 +RGH + W +Q P WV+ + + L + I ++M RY+G+ WDV NE+ Sbjct: 106 IRGHTLVWHSQ--LPSWVQSIYDKGTLIQVMQNHIATVMQRYKGKVYAWDVVNEIFNEDG 163 Query: 1181 -LHFNFYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDAS-STVDAYVARLKD 1354 L + + +G + F A+ DP A L++N+YN+ D AS + V +K Sbjct: 164 SLRQSHFYNVIGEDYVRIAFETARAVDPNAKLYINDYNL----DSASYPKLTGLVNHVKK 219 Query: 1355 LRAGGAVLEGIGLEGHFSKPNIPYMRAVLDKLATLNL-PIWFTEIDINNKFDAQTQAVYL 1531 A G ++GIG + H S + L+ LA + TE+DI A + Sbjct: 220 WVAAGVPIDGIGSQTHLSAGAGAAVSGALNALAGAGTKEVAITELDI-----AGASSTDY 274 Query: 1532 EQVLREAYAHPAVSGVMLW 1588 V++ P G+ +W Sbjct: 275 VNVVKACLNQPKCVGITVW 293
>Q00177:XYNC_EMENI Endo-1,4-beta-xylanase C precursor - Emericella nidulans (Aspergillus| nidulans) Length = 327 Score = 95.1 bits (235), Expect = 1e-18 Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 11/214 (5%) Frame = +2 Query: 884 MVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATP 1063 +V F E+ +KW + EP+ G + D ++ + H VRGH + W +Q P Sbjct: 58 IVASQFGVITPENSMKWDALEPSQGNFGWSGADYLVDYATQHNKKVRGHTLVWHSQ--LP 115 Query: 1064 RWVKGLSPED-LRSAVNTRIQSLMTRYRGEFAHWDVNNEMLH------FNFYEQRLGPNA 1222 WV + + LRS + I ++ RY+G+ HWDV NE+ + + + LG + Sbjct: 116 SWVSSIGDANTLRSVMTNHINEVVGRYKGKIMHWDVVNEIFNEDGTFRNSVFYNLLGEDF 175 Query: 1223 TMDFFSVAQDADPLATLFMNEYNVVETCDDAS-STVDAYVARLKDLRAGGAVLEGIGLEG 1399 F A+ ADP A L++N+YN+ D AS + A + +K A G ++GIG + Sbjct: 176 VRIAFETARAADPDAKLYINDYNL----DSASYAKTQAMASYVKKWLAEGVPIDGIGSQA 231 Query: 1400 HFSKPNIPYMRA--VLDKLATLNL-PIWFTEIDI 1492 H+S + A L LA + + TE+DI Sbjct: 232 HYSSSHWSSTEAAGALSSLANTGVSEVAITELDI 265
>Q60041:XYNB_THENE Endo-1,4-beta-xylanase B precursor - Thermotoga neapolitana| Length = 346 Score = 94.4 bits (233), Expect = 2e-18 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 16/259 (6%) Frame = +2 Query: 860 PGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIF 1039 P + E+ + FN +++KW + P F+ ++ + F + ++V GH + Sbjct: 48 PDAEKYMEVAKREFNILTPGNQMKWDTIHPERNRYNFEPAEKHVEFALKNDMIVHGHTLV 107 Query: 1040 WENQDATPRWVKG--LSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEML------HFNF 1195 W NQ P W+ G S E+L + + ++++++ +RG WDV NE + + Sbjct: 108 WHNQ--LPGWLTGQEWSKEELLNILEDHVKTVVSHFRGRVKIWDVVNEAVSDSGTYRESI 165 Query: 1196 YEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAV 1375 + + +GP A++ADP A L N+YN+ ++ ++ + +K+LR G Sbjct: 166 WYRTIGPEYIEKALIWAKEADPDAILIYNDYNI----EEINAKSNFVYNMIKNLREKGVP 221 Query: 1376 LEGIGLEGHFSKPNIPY--MRAVLDKLATLNLPIWFTEIDI------NNKFDAQTQAVYL 1531 ++GIG + H I Y + L++ A L L I+ TE+D + + + QA Sbjct: 222 IDGIGFQMHIDYRGINYESFKKNLERFAELGLQIYITEMDRGFPLGGSVGYYLKKQAEVY 281 Query: 1532 EQVLREAYAHPAVSGVMLW 1588 ++ +PAV + W Sbjct: 282 RRIFEICLDNPAVRAIQFW 300
>P26514:XYNA_STRLI Endo-1,4-beta-xylanase A precursor - Streptomyces lividans| Length = 477 Score = 93.2 bits (230), Expect = 4e-18 Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 10/240 (4%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVKG 1078 FN E+E+K +TEP G F D++ + + VRGH + W +Q P W++ Sbjct: 79 FNMVTAENEMKIDATEPQRGQFNFSSADRVYNWAVQNGKQVRGHTLAWHSQQ--PGWMQS 136 Query: 1079 LSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEML-------HFNFYEQRLGPNATMDFF 1237 LS LR A+ I +M Y+G+ WDV NE + QR G + F Sbjct: 137 LSGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAF 196 Query: 1238 SVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGHFSKPN 1417 A+ ADP A L N+YNV + A ++D + G ++ +G + HF+ + Sbjct: 197 RTARAADPSAKLCYNDYNVENW---TWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGS 253 Query: 1418 IPY---MRAVLDKLATLNLPIWFTEIDINNKFDAQTQAVYLEQVLREAYAHPAVSGVMLW 1588 PY R L A L + + TE+DI A T A V + A G+ +W Sbjct: 254 -PYNSNFRTTLQNFAALGVDVAITELDIQGA-PASTYA----NVTNDCLAVSRCLGITVW 307
>Q12603:XYNA_DICTH Beta-1,4-xylanase - Dictyoglomus thermophilum| Length = 352 Score = 93.2 bits (230), Expect = 4e-18 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 10/233 (4%) Frame = +2 Query: 839 VGDRLHHPGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVM 1018 +G + H +++ FN+ E+++KW P + F D+++ F + + Sbjct: 45 IGAAVSHLNIYHYENLLKKHFNSLTPENQMKWEVIHPKPYVYDFGPADEIVDFAMKNGMK 104 Query: 1019 VRGHNIFWENQDATPRWVKGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHFNFY 1198 VRGH + W NQ TP WV + +++ + + I+ ++ Y+G+ WDV NE L N Sbjct: 105 VRGHTLVWHNQ--TPGWVYAGTKDEILARLKEHIKEVVGHYKGKVYAWDVVNEALSDNPN 162 Query: 1199 E--------QRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKD 1354 E G F A + DP A LF N+YN+ +D AY +K Sbjct: 163 EFLRRAPWYDICGEEVIEKAFIWAHEVDPDAKLFYNDYNL----EDPIKREKAY-KLVKK 217 Query: 1355 LRAGGAVLEGIGLEGHFSK--PNIPYMRAVLDKLATLNLPIWFTEIDINNKFD 1507 L+ G + GIG++GH++ P + + + A L + + TE DI+ +D Sbjct: 218 LKDKGVPIHGIGIQGHWTLAWPTPKMLEDSIKRFAELGVEVQVTEFDISIYYD 270
>O60206:XLNA_AGABI Endo-1,4-beta-xylanase precursor - Agaricus bisporus (Common| mushroom) Length = 333 Score = 89.0 bits (219), Expect = 7e-17 Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 14/244 (5%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWVK- 1075 FN + +KW +TEP+ G F D + R+ ++RGH W +Q P WV Sbjct: 55 FNQITAGNSMKWDATEPSRGTFTFSNGDTVANMARNRGQLLRGHTCVWHSQ--LPNWVTS 112 Query: 1076 -GLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNE------MLHFNFYEQRLGPNATMDF 1234 L S V +L++ YRG+ WDV NE + + Q+ G Sbjct: 113 GNFDNSTLLSIVQNHCSTLVSHYRGQMYSWDVVNEPFNEDGSFRQSVFFQKTGTAYIATA 172 Query: 1235 FSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGHFSKP 1414 A++ADP L++N++N+ T A ST + ++ L+ ++GIG++ H Sbjct: 173 LRAARNADPNTKLYINDFNIEGT--GAKST--GMINLVRSLQQQNVPIDGIGVQAHLIVG 228 Query: 1415 NIP-YMRAVLDKLATLNLPIWFTEIDINNKFDAQTQAVYLEQ-----VLREAYAHPAVSG 1576 IP ++ L A L + + TE+DI Q + +Q V+R A G Sbjct: 229 QIPSSIQQNLQNFANLGVEVAITELDIRMTLPVTQQKLEQQQEDYRTVIRACKAVSRCVG 288 Query: 1577 VMLW 1588 V +W Sbjct: 289 VTVW 292
>P48789:XYNA_PRERU Endo-1,4-beta-xylanase A precursor - Prevotella ruminicola| (Bacteroides ruminicola) Length = 369 Score = 88.6 bits (218), Expect = 9e-17 Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 14/222 (6%) Frame = +2 Query: 872 RVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQ 1051 ++ + FN+ V E+ +K P + DQ++ F H++ V GH + W +Q Sbjct: 51 KIVHAITDNFNSVVAENCMKGEIIHPEEDYYDWHDADQLVKFAEQHKMTVHGHCLVWHSQ 110 Query: 1052 DATPRWV------KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHFNF------ 1195 P+W+ K ++ E L + I +++ RY+G+ WDV NE + N Sbjct: 111 --APKWMFTDKEGKEVTREVLIDRMYHHITNVVKRYKGKIKGWDVVNEAILDNGEYRQSP 168 Query: 1196 YEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAV 1375 Y + +GP+ F A ADP A L+ N+Y++ + +A V +K+L+A G Sbjct: 169 YYKIIGPDFIKLAFIFAHQADPDAELYYNDYSM-----SIPAKRNAVVKLVKELKAAGCR 223 Query: 1376 LEGIGLEGH--FSKPNIPYMRAVLDKLATLNLPIWFTEIDIN 1495 ++ +G++ H F+ PN+ + + + FTE+D+N Sbjct: 224 IDAVGMQSHNGFNYPNLEDYENSIKAFIAAGVDVQFTELDVN 265
>P40944:XYNA_CALSR Endo-1,4-beta-xylanase A precursor - Caldicellulosiruptor sp. (strain| Rt8B.4) Length = 684 Score = 88.6 bits (218), Expect = 9e-17 Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 28/233 (12%) Frame = +2 Query: 881 EMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDAT 1060 E+++ FN+ E+E+K S +P G F + D+ + F + + +RGH + W Q T Sbjct: 382 EVIKRHFNSITPENEMKPESLQPYEGGFSFSIADEYVDFCKKDNISLRGHTLVWHQQ--T 439 Query: 1061 PRWV------------KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHFN---- 1192 P W E L + IQ+++ RY+G+ WDV NE + N Sbjct: 440 PSWFFTNPETGEKLTNSEKDKEILLDRLKKHIQTVVGRYKGKVYAWDVVNEAIDENQPDG 499 Query: 1193 ----FYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVAR----- 1345 + LGP F A +ADP A LF N+Y ST D Y Sbjct: 500 YRRSDWYNILGPEYIEKAFIWAHEADPKAKLFYNDY----------STEDPYKREFIYKL 549 Query: 1346 LKDLRAGGAVLEGIGLEGHFSK--PNIPYMRAVLDKLATL-NLPIWFTEIDIN 1495 +K+L+A G + G+GL+ H S P++ + + + + L I FTEIDI+ Sbjct: 550 IKNLKAKGVPVHGVGLQCHISLDWPDVSEIEETVKLFSRIPGLEIHFTEIDIS 602
>P45703:XYN2_BACST Endo-1,4-beta-xylanase precursor - Bacillus stearothermophilus| (Geobacillus stearothermophilus) Length = 330 Score = 86.7 bits (213), Expect = 3e-16 Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 17/215 (7%) Frame = +2 Query: 902 NAAVFEDELKWYSTEPASGLLRFDVP-DQMLAFVRSHRVMVRGHNIFWENQDATPRWV-- 1072 N+ E+ +K+ +P G FD+ + SH V RGH + W NQ TP WV Sbjct: 39 NSLTAENHMKFEHLQPEEGRFTFDIAIKSSTSPFSSHGV--RGHTLVWHNQ--TPSWVFQ 94 Query: 1073 ----KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEM--------LHFNFYEQRLGP 1216 + + L + + I +++ RY+G+ WDV NE L + + Q +G Sbjct: 95 DSQGHFVGRDVLLERMKSHISTVVQRYKGKVYCWDVINEAVADEGSEWLRSSTWRQIIGD 154 Query: 1217 NATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLE 1396 + F A +ADP A LF N+YN E + + V K LR G + GIG++ Sbjct: 155 DFIQQAFLYAHEADPEALLFYNDYN--ECFPEKREKIYTLV---KSLRDKGIPIHGIGMQ 209 Query: 1397 GHFS--KPNIPYMRAVLDKLATLNLPIWFTEIDIN 1495 H+S +P + +RA +++ A+L + + TE+DI+ Sbjct: 210 AHWSLNRPTLDEIRAAIERYASLGVILHITELDIS 244
>P49942:XYNA_BACOV Endo-1,4-beta-xylanase A precursor - Bacteroides ovatus| Length = 376 Score = 85.9 bits (211), Expect = 6e-16 Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 15/235 (6%) Frame = +2 Query: 833 VGVGDRLHHPGKRRVP--EMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRS 1006 +GV H + V E+V+ FN+ V E+ +K P F D+ ++F S Sbjct: 40 IGVSVNTHQSSGKDVAAVEIVKKNFNSIVAENCMKSSVIHPKENKYNFAQADEFVSFGES 99 Query: 1007 HRVMVRGHNIFWENQDATPRWV----KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNN 1174 +++ + GH + W +Q A V +SPE L+ + I +++ RY+G WDV N Sbjct: 100 NQMAIIGHCLIWHSQLAPWFCVDKDGNNVSPEVLKKRMKDHITTIVKRYKGRIKGWDVVN 159 Query: 1175 EMLHFN-------FYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDA 1333 E + N FYE LG F A +ADP A L+ N+Y++ + +A Sbjct: 160 EAIEDNGAYRKTKFYE-ILGEEYIPLAFQYAHEADPDAELYYNDYSMAQ-----PGRREA 213 Query: 1334 YVARLKDLRAGGAVLEGIGLEGHFSK--PNIPYMRAVLDKLATLNLPIWFTEIDI 1492 V + DL+ G ++ IG++GH P I + A + I TE+D+ Sbjct: 214 VVKMVNDLKKRGIRIDAIGMQGHIGMDYPKISEFEKSMLAFAGTGVKIMITELDL 268
>Q60037:XYNA_THEMA Endo-1,4-beta-xylanase A precursor - Thermotoga maritima| Length = 1059 Score = 84.0 bits (206), Expect = 2e-15 Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 20/276 (7%) Frame = +2 Query: 881 EMVRGAFNAAVFEDELKWYST----EPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWEN 1048 E++ FN+ E+E+K S E RF+ D+ + FV + +++RGH + W N Sbjct: 396 ELITKHFNSITAENEMKPESLLAGIENGKLKFRFETADKYIQFVEENGMVIRGHTLVWHN 455 Query: 1049 QDATPRWV------KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEM--------LH 1186 Q TP W LS E + + I +++ ++G+ WDV NE L Sbjct: 456 Q--TPDWFFKDENGNLLSKEAMTERLKEYIHTVVGHFKGKVYAWDVVNEAVDPNQPDGLR 513 Query: 1187 FNFYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAG 1366 + + Q +GP+ F A++ADP A LF N+YN E D +KDL+ Sbjct: 514 RSTWYQIMGPDYIELAFKFAREADPDAKLFYNDYNTFE-----PRKRDIIYNLVKDLKEK 568 Query: 1367 GAVLEGIGLEGHFS-KPNIPYMRAVLDKLATL-NLPIWFTEIDINNKFDAQTQAVYLEQV 1540 G +++GIG++ H S +I + + K +T+ + I TE+D++ D+ + + Sbjct: 569 G-LIDGIGMQCHISLATDIKQIEEAIKKFSTIPGIEIHITELDMSVYRDSSSN---YPEA 624 Query: 1541 LREAYAHPAVSGVMLWTALHESGCYQMCLTDWNLKN 1648 R A A + L+ + +T W LK+ Sbjct: 625 PRTALIEQAHKMMQLFEIFKKYSNVITNVTFWGLKD 660
>Q60042:XYNA_THENE Endo-1,4-beta-xylanase A precursor - Thermotoga neapolitana| Length = 1055 Score = 80.5 bits (197), Expect = 2e-14 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 20/218 (9%) Frame = +2 Query: 902 NAAVFEDELKWYST----EPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRW 1069 N++ E+E+K S E RF+ D+ + F + + ++VRGH + W NQ TP W Sbjct: 399 NSSTAENEMKPDSLLAGIENGKLKFRFETADKYIEFAQQNGMVVRGHTLVWHNQ--TPEW 456 Query: 1070 V------KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEM--------LHFNFYEQR 1207 LS E++ + I +++ ++G+ WDV NE L + + Q Sbjct: 457 FFKDENGNLLSKEEMTERLREYIHTVVGHFKGKVYAWDVVNEAVDPNQPDGLRRSTWYQI 516 Query: 1208 LGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGI 1387 +GP+ F A++ADP A LF N+YN E D +K L+ G +++GI Sbjct: 517 MGPDYIELAFKFAREADPNAKLFYNDYNTFE-----PKKRDIIYNLVKSLKEKG-LIDGI 570 Query: 1388 GLEGHFS-KPNIPYMRAVLDKLATL-NLPIWFTEIDIN 1495 G++ H S +I + + K +T+ + I TE+DI+ Sbjct: 571 GMQCHISLATDIRQIEEAIKKFSTIPGIEIHITELDIS 608
>P10474:GUNB_CALSA Endoglucanase/exoglucanase B precursor [Includes: Endoglucanase -| Caldocellum saccharolyticum (Caldicellulosiruptor saccharolyticus) Length = 1039 Score = 80.1 bits (196), Expect = 3e-14 Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 21/225 (9%) Frame = +2 Query: 884 MVRGAFNAAVFEDELKWYST---EPASGL-LRFDVPDQMLAFVRSHRVMVRGHNIFWENQ 1051 MV FN+ E+E+K S + ++GL RF D + F ++++ +RGH + W NQ Sbjct: 72 MVLKHFNSITAENEMKPESLLAGQTSTGLSYRFSTADAFVDFASTNKIGIRGHTLVWHNQ 131 Query: 1052 DATPRWV------KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHFN------- 1192 TP W + LS + L + + I ++ RY+G+ WDV NE + N Sbjct: 132 --TPDWFFKDSNGQRLSKDALLARLKQYIYDVVGRYKGKVYAWDVVNEAIDENQPDSYRR 189 Query: 1193 -FYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGG 1369 + + GP F A +ADP A LF N+YN + S D +K+L++ G Sbjct: 190 STWYEICGPEYIEKAFIWAHEADPNAKLFYNDYNT-----EISKKRDFIYNMVKNLKSKG 244 Query: 1370 AVLEGIGLEGHFSK--PNIPYMRAVLDKLATL-NLPIWFTEIDIN 1495 + GIG++ H + P++ + + +++ + I TE+D++ Sbjct: 245 IPIHGIGMQCHINVNWPSVSEIENSIKLFSSIPGIEIHITELDMS 289
>P14768:XYNA_PSEFL Endo-1,4-beta-xylanase A precursor - Pseudomonas fluorescens| Length = 611 Score = 72.8 bits (177), Expect = 5e-12 Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 23/238 (9%) Frame = +2 Query: 884 MVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATP 1063 +VR FN E+ +K S F D+++++ + V GH + W P Sbjct: 296 IVRAEFNQITAENIMKMSYMYSGSNF-SFTNSDRLVSWAAQNGQTVHGHALVWHPSYQLP 354 Query: 1064 RWVKGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHFN----------------- 1192 W S + R I ++ + G+ WDV NE L + Sbjct: 355 NWASD-SNANFRQDFARHIDTVAAHFAGQVKSWDVVNEALFDSADDPDGRGSANGYRQSV 413 Query: 1193 FYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGA 1372 FY Q GP + F A+ ADP A L+ N++N E + A V ++ L G Sbjct: 414 FYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEEN----GAKTTALVNLVQRLLNNGV 469 Query: 1373 VLEGIGLEGHFSK--PNIPYMRAVLDKLATLN--LPIWFTEIDI--NNKFDAQTQAVY 1528 ++G+G + H P+I +R + K+ L+ L I TE+D+ NN +D + Y Sbjct: 470 PIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPTLKIKITELDVRLNNPYDGNSSNDY 527
>P23556:XYNA_CALSA Endo-1,4-beta-xylanase A precursor - Caldocellum saccharolyticum| (Caldicellulosiruptor saccharolyticus) Length = 342 Score = 71.2 bits (173), Expect = 2e-11 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%) Frame = +2 Query: 899 FNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWV-- 1072 FN+ E+ +K+ + P F+ ++ F + + +RGH W NQ TP WV Sbjct: 48 FNSLTPENAMKFENIHPEEQRYNFEEVARIKEFAIKNDMKLRGHTFVWHNQ--TPGWVFL 105 Query: 1073 ----KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNE--------MLHFNFYEQRLGP 1216 + S E + + I++L RY+ WDV NE +L + + + +G Sbjct: 106 DKNGEEASKELVIERLREHIKTLCERYKDVVYAWDVVNEAVEDKTEKLLRESNWRKIIGD 165 Query: 1217 NATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLE 1396 + F +A++ A LF N+YN ++ ++ LK+L G ++GIG++ Sbjct: 166 DYIKIAFEIAREYAGDAKLFYNDYN-----NEMPYKLEKTYKVLKELLERGTPIDGIGIQ 220 Query: 1397 GHFS---KPNIPYMRAVLDKLATLNLPIWFTEIDIN 1495 H++ K + ++ ++ A+L L I TE+DI+ Sbjct: 221 AHWNIWDKNLVSNLKKAIEVYASLGLEIHITELDIS 256
>P07528:XYNA_BACHD Endo-1,4-beta-xylanase A precursor - Bacillus halodurans| Length = 396 Score = 69.7 bits (169), Expect = 4e-11 Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 26/234 (11%) Frame = +2 Query: 872 RVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQ 1051 R ++++ +N+ V E+ +K S +P G ++ D+++ F R H + +R H + W +Q Sbjct: 79 RQAQILKHHYNSLVAENAMKPESLQPREGEWNWEGADKIVEFARKHNMELRFHTLVWHSQ 138 Query: 1052 DATPRW----------VKGLSPED-------LRSAVNTRIQSLMTRYRGEFAHWDVNNEM 1180 P W V P+ L + I++++ RY+ + WDV NE+ Sbjct: 139 --VPEWFFIDEDGNRMVDETDPDKREANKQLLLERMENHIKTVVERYKDDVTSWDVVNEV 196 Query: 1181 ------LHFNFYEQRLGPNATMDFFSVAQD-ADPLATLFMNEYNVVETCDDASSTVDAYV 1339 L + + Q G + F A+ A L++N+YN + S D Sbjct: 197 IDDGGGLRESEWYQITGTDYIKVAFETARKYGGEEAKLYINDYNT-----EVPSKRDDLY 251 Query: 1340 ARLKDLRAGGAVLEGIGLEGH--FSKPNIPYMRAVLDKLATLNLPIWFTEIDIN 1495 +KDL G ++G+G + H P+I RA +K +L L TE+D++ Sbjct: 252 NLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLGLDNQVTELDMS 305
>P40943:XYN1_BACST Endo-1,4-beta-xylanase precursor - Bacillus stearothermophilus| (Geobacillus stearothermophilus) Length = 407 Score = 68.2 bits (165), Expect = 1e-10 Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 36/258 (13%) Frame = +2 Query: 881 EMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDAT 1060 +M++ FN+ V E+ +K S +P G F+ D+++ F +++ + +R H + W +Q Sbjct: 74 QMLKRHFNSIVAENVMKPISIQPEEGKFNFEQADRIVKFAKANGMDIRFHTLVWHSQ--V 131 Query: 1061 PRWV-----------------KGLSPEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHF 1189 P+W + + + L + T I++++ RY+ + +WDV NE++ Sbjct: 132 PQWFFLDKEGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKDDIKYWDVVNEVVG- 190 Query: 1190 NFYEQRLGP---NATMDFFSVAQDA-----DPLATLFMNEYNVVETCDDASSTVDAYVAR 1345 + + R P A +D+ VA A L+MN+YN + A Sbjct: 191 DDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMNDYNT-----EVEPKRTALYNL 245 Query: 1346 LKDLRAGGAVLEGIGLEGH--FSKPNIPYMRAVLDKLATLNLPIWFTEIDIN-------- 1495 +K L+ G ++GIG + H P+ + ++ A L L TE+D++ Sbjct: 246 VKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAALGLDNQITELDVSMYGWPPRA 305 Query: 1496 -NKFDAQTQAVYLEQVLR 1546 +DA + +L+Q R Sbjct: 306 YPTYDAIPKQKFLDQAAR 323
>P26223:XYNB_BUTFI Endo-1,4-beta-xylanase B - Butyrivibrio fibrisolvens| Length = 635 Score = 60.1 bits (144), Expect = 3e-08 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 21/209 (10%) Frame = +2 Query: 935 YSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRW-----VKGLSPEDLR 1099 Y+ PA L F+ L F + +++ +RGH + W NQ TP+W P R Sbjct: 62 YNLSPA---LTFENAIPYLEFAKDNKIAMRGHTLVWHNQ--TPKWFFCERYNENFPMADR 116 Query: 1100 SAVNTRIQS--------LMTRYRGEFAHWDVNNEMLHFNFYEQRLGPNAT-MDFFSVAQD 1252 + R++S + T Y G WDV NE++ + + + DFF A + Sbjct: 117 ETILARLESYIHGVLDFVQTNYPGIIYAWDVVNEIVDEGAFRKSIWTETVGEDFFIKAFE 176 Query: 1253 -----ADPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGH--FSK 1411 A P +LF N+Y + ++ + L D + +++G+G++ H Sbjct: 177 FARKYAAPEVSLFYNDYETAQPW-KRDFILEKVLGPLIDKK----LIDGMGMQSHLLMDH 231 Query: 1412 PNIPYMRAVLDKLATLNLPIWFTEIDINN 1498 P+I R L+ + L I TE+D++N Sbjct: 232 PDISEYRTALEMYGSTGLQIHITELDMHN 260
>P40942:CEXY_CLOSR Thermostable celloxylanase - Clostridium stercorarium| Length = 387 Score = 58.5 bits (140), Expect = 1e-07 Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 26/234 (11%) Frame = +2 Query: 872 RVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIFWENQ 1051 ++ E+ + N V E+ +K S +P G ++ D+++ F + + + +R H + W NQ Sbjct: 69 QIAELYKKHVNMLVAENAMKPASLQPTEGNFQWADADRIVQFAKENGMELRFHTLVWHNQ 128 Query: 1052 DAT--------PRWVKGLSPED-------LRSAVNTRIQSLMTRYRGEFAHWDVNNEMLH 1186 T V+ P+ L + I++++ RY+ + WDV NE++ Sbjct: 129 TPTGFSLDKEGKPMVEETDPQKREENRKLLLQRLENYIRAVVLRYKDDIKSWDVVNEVIE 188 Query: 1187 FN---------FYEQRLGPNATMDFFSVAQDADPLATLFMNEYNVVETCDDASSTVDAYV 1339 N +Y+ + F + + L++N+YN D D Sbjct: 189 PNDPGGMRNSPWYQITGTEYIEVAFRATREAGGSDIKLYINDYNT-----DDPVKRDILY 243 Query: 1340 ARLKDLRAGGAVLEGIGLEGHFSKPNIPYMRAV--LDKLATLNLPIWFTEIDIN 1495 +K+L G ++G+G + H N P R + + K A L L TE+D++ Sbjct: 244 ELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGLGLDNIITELDMS 297
>P23551:XYNA_BUTFI Endo-1,4-beta-xylanase A precursor - Butyrivibrio fibrisolvens| Length = 411 Score = 51.6 bits (122), Expect = 1e-05 Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 29/209 (13%) Frame = +2 Query: 968 FDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWV---------KGLSPEDLRSAVNTRI 1120 F D+ + + + +RGH + W +Q TP W+ + ++ + + + + Sbjct: 120 FRTVDEAVKICYENGLKMRGHTLVWHSQ--TPTWLFRENYSGNGRFVNTATMDARLEFYV 177 Query: 1121 QSLM-----TRYRGEFAHWDVNNEMLHF--NFYEQRLGPNAT-----MDFFSVAQDA--- 1255 +S+M +Y +WDV NE LH + +E G N T F+ A Sbjct: 178 KSVMGHFYSGKYGSTLVYWDVCNETLHAQNSGWEAVYGSNKTNAVYVKKAFNYAYQVLEQ 237 Query: 1256 ---DPLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGHFSK--PNI 1420 LF N+YN +D V+ + G V G+G++ H P++ Sbjct: 238 YKLTNSVKLFYNDYNTYMEVNDVIKLVNY-------INQGKKVCAGVGMQSHLGTGFPSV 290 Query: 1421 PYMRAVLDKLATLNLPIWFTEIDINNKFD 1507 Y L+ + TE+DI NK D Sbjct: 291 DYYTNALNSFLRAGFEVQITELDITNKGD 319
>P07529:XYNA_CRYAL Endo-1,4-beta-xylanase precursor - Cryptococcus albidus (Filobasidium| floriforme) Length = 332 Score = 45.8 bits (107), Expect = 7e-04 Identities = 22/64 (34%), Positives = 37/64 (57%) Frame = +2 Query: 860 PGKRRVPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDVPDQMLAFVRSHRVMVRGHNIF 1039 PG + V +++ F+A E+E+KW EP G F D+++A + ++RGHNI Sbjct: 52 PGSQYV-QILESQFDAITPENEMKWEVVEPTEGNFDFTGTDKIVAEAKKTGSLLRGHNIC 110 Query: 1040 WENQ 1051 W++Q Sbjct: 111 WDSQ 114
>P51584:XYNY_CLOTM Endo-1,4-beta-xylanase Y precursor - Clostridium thermocellum| Length = 1077 Score = 45.4 bits (106), Expect = 9e-04 Identities = 62/276 (22%), Positives = 110/276 (39%), Gaps = 50/276 (18%) Frame = +2 Query: 875 VPEMVRGAFNAAVFEDELKWYSTEPASGLLRFDV------PDQMLAFVRSHRVMVRGHNI 1036 + ++ FN+ E+E+K +T SG ++ +L F + + VRGH + Sbjct: 219 IKALILREFNSITCENEMKPDATLVQSGSTNTNIRVSLNRAASILNFCAQNNIAVRGHTL 278 Query: 1037 FWENQDATPRWVKGLSPED-----LRSAVNTRIQSLMTRYRGEFAH---------WDVNN 1174 W +Q TP+W + +D +S ++ R++S + E +DV N Sbjct: 279 VWHSQ--TPQWFFKDNFQDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVVN 336 Query: 1175 EMLHFNF--------------------YEQRLGPNATMD-FFSVAQDADPL-ATLFMNEY 1288 E + + + Q G N ++ F+ A+ P L+ N+Y Sbjct: 337 EAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKFIEKAFTYARKYAPANCKLYYNDY 396 Query: 1289 NVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLEGHFSK-----PNIPYMRAVLDKLA 1453 N E D + + A L + +L+G+G++ H + I +A L K Sbjct: 397 N--EYWDHKRDCIASICANLYN----KGLLDGVGMQSHINADMNGFSGIQNYKAALQKYI 450 Query: 1454 TLNLPIWFTEIDI---NNKFDAQTQAVYLEQVLREA 1552 + + TE+DI N KF Q QA + V + A Sbjct: 451 NIGCDVQITELDISTENGKFSLQQQADKYKAVFQAA 486
>P23557:XYN4_CALSA Putative endo-1,4-beta-xylanase - Caldocellum saccharolyticum| (Caldicellulosiruptor saccharolyticus) Length = 312 Score = 44.7 bits (104), Expect = 0.002 Identities = 49/204 (24%), Positives = 72/204 (35%), Gaps = 23/204 (11%) Frame = +2 Query: 965 RFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPRWV-------------KGLSPEDLRSA 1105 +FD L F + + + +RGH + W NQ TP W L S Sbjct: 23 KFDSCIPALQFCKENGIKMRGHVLVWHNQ--TPEWFFHKDYDVSKPLVDAATMERRLESY 80 Query: 1106 VNTRIQSLMTRYRGEFAHWDVNNEM---------LHFNFYEQRLGPNATMDFFSVAQDAD 1258 + I+ Y G WDV NE ++ N+Y F+ + A Sbjct: 81 IKQVIEFCQKNYPGVVYCWDVVNEAILDDGSWREINNNWYTIMKEKYVEKAFYYARKYAK 140 Query: 1259 PLATLFMNEYNVVETCDDASSTVDAYVARLKDLRAGGAVLEGIGLE-GHFSKPNIPYMRA 1435 LF N+YNV + A + K L G + +GL +I + Sbjct: 141 KDVALFYNDYNVFLPAKREAIYNLAQKLKEKGLIDGLGLQPTVGLNYPELDSDDIDSFKT 200 Query: 1436 VLDKLATLNLPIWFTEIDINNKFD 1507 L+ A L L I TE++ K D Sbjct: 201 TLETFAKLGLQIHITELNFEIKGD 224
>O42970:YB95_SCHPO Uncharacterized serine-rich protein C1E8.05 precursor -| Schizosaccharomyces pombe (Fission yeast) Length = 317 Score = 38.9 bits (89), Expect = 0.083 Identities = 32/122 (26%), Positives = 56/122 (45%) Frame = -3 Query: 1563 GCAYASRSTCSRYTACVCASNLLLMSISVNQMGRLSVASLSSTALM*GMLGLEKCPSRPI 1384 G ++ T S+Y S + + S++ G ++SST++ M+G S I Sbjct: 93 GLSFDGGETYSQYFTLQACSTCTISTSSLSYSG-----TISSTSIAPSMIGTRTSSSYFI 147 Query: 1383 PSSTAPPARRSLSRATYASTVEEASSQVSTTLYSFMKSVASGSASCATLKKSMVALGPSR 1204 SS++ P+ S S ++ S+ SS S + S S S S+S ++ K S + S+ Sbjct: 148 TSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSK 207 Query: 1203 CS 1198 S Sbjct: 208 SS 209
>Q02346:MYOD1_RAT Myoblast determination protein 1 - Rattus norvegicus (Rat)| Length = 318 Score = 36.2 bits (82), Expect = 0.54 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 Query: 516 PGPASR*SEPRKSPPASPNPRRCTLWTC*GCRPQTPGTGRRSPSS 382 PGP +R E ++P RC LW C C+ +T RR ++ Sbjct: 71 PGPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAAT 115
>P10085:MYOD1_MOUSE Myoblast determination protein 1 - Mus musculus (Mouse)| Length = 318 Score = 36.2 bits (82), Expect = 0.54 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -3 Query: 516 PGPASR*SEPRKSPPASPNPRRCTLWTC*GCRPQTPGTGRRSPSS 382 PGP +R E ++P RC LW C C+ +T RR ++ Sbjct: 71 PGPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAAT 115
>Q9NP08:HMX1_HUMAN Homeobox protein HMX1 - Homo sapiens (Human)| Length = 373 Score = 35.8 bits (81), Expect = 0.71 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Frame = -3 Query: 582 PLGT--PSSRSW-RGPCRCTVCRSCPGPASR*SEPRKSPPASP-NPRRCTLWTC*GCRPQ 415 PLG P W GP R C + PGP+ P + PP P RRC W C P+ Sbjct: 292 PLGPRPPCPSRWPAGPRRPHRCSASPGPSPTRWPPSRPPPPCPFCGRRCLAW----CEPR 347 Query: 414 TPG 406 PG Sbjct: 348 LPG 350
>Q3B380:RL25_PELLD 50S ribosomal protein L25 - Pelodictyon luteolum (strain DSM 273)| (Chlorobium luteolum (strain DSM 273)) Length = 202 Score = 33.9 bits (76), Expect = 2.7 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%) Frame = -2 Query: 1273 ERGERVGVLRHAEEVHGRVGAQPLLVEIEVQHLVV--HVPVREL--AAVPGHEALDAR 1112 E+G ++ ++RH+ V G+ G P V I+V L + + VRE+ A PG E +D R Sbjct: 116 EKGGKLQIIRHSLTVKGKPGDMPAHVTIDVTALEIGHSIHVREIPATAFPGLEIMDDR 173
>P29846:POLG_HCVTW Genome polyprotein [Contains: Core protein p21 - Hepatitis C virus| genotype 1b (isolate Taiwan) (HCV) Length = 3010 Score = 33.9 bits (76), Expect = 2.7 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = -3 Query: 1401 CPSRPIPSSTAPPARRSLSRATYASTVEEASSQVSTTLYSFMKSVASGSAS 1249 CP P+ + PP RR + STV A ++++T + +S A+GS + Sbjct: 2314 CPLPPVKAPPIPPPRRKRTVVLTESTVSSALAELATKTFGSSESSAAGSGT 2364
>P29331:MYOD1_SHEEP Myoblast determination protein 1 - Ovis aries (Sheep)| Length = 319 Score = 33.9 bits (76), Expect = 2.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 516 PGPASR*SEPRKSPPASPNPRRCTLWTC*GCRPQTPGTGRRSPSS 382 P P +R E ++P RC LW C C+ +T RR ++ Sbjct: 71 PAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAAT 115
>P49811:MYOD1_PIG Myoblast determination protein 1 - Sus scrofa (Pig)| Length = 319 Score = 33.9 bits (76), Expect = 2.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 516 PGPASR*SEPRKSPPASPNPRRCTLWTC*GCRPQTPGTGRRSPSS 382 P P +R E ++P RC LW C C+ +T RR ++ Sbjct: 71 PAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAAT 115
>P15172:MYOD1_HUMAN Myoblast determination protein 1 - Homo sapiens (Human)| Length = 319 Score = 33.9 bits (76), Expect = 2.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 516 PGPASR*SEPRKSPPASPNPRRCTLWTC*GCRPQTPGTGRRSPSS 382 P P +R E ++P RC LW C C+ +T RR ++ Sbjct: 71 PAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAAT 115
>Q7YS82:MYOD1_BOVIN Myoblast determination protein 1 - Bos taurus (Bovine)| Length = 318 Score = 33.9 bits (76), Expect = 2.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 516 PGPASR*SEPRKSPPASPNPRRCTLWTC*GCRPQTPGTGRRSPSS 382 P P +R E ++P RC LW C C+ +T RR ++ Sbjct: 71 PAPGAREDEHVRAPSGHHQAGRCLLWACKACKRKTTNADRRKAAT 115
>P03189:V120_EBV Capsid assembly protein BOLF1 - Epstein-Barr virus (strain B95-8)| (HHV-4) (Human herpesvirus 4) Length = 1239 Score = 33.5 bits (75), Expect = 3.5 Identities = 26/66 (39%), Positives = 27/66 (40%) Frame = -3 Query: 1029 CPRTITRCDRTNASIWSGTSNRSSPDAGSVEYHLXXXSNTAALNAPRTISGTRRFPGWWR 850 CPR R RT S S PD G E H +AA A R TRR G R Sbjct: 1174 CPRR--RSPRTTPSPSRRASGGGGPDRGEAEAHTYPPYLSAAAAASRVRPRTRR--GATR 1229 Query: 849 RSPTPT 832 R P PT Sbjct: 1230 RPPRPT 1235
>P81650:BGAL_PSEHA Beta-galactosidase - Pseudoalteromonas haloplanktis (Alteromonas| haloplanktis) Length = 1039 Score = 33.1 bits (74), Expect = 4.6 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 11/149 (7%) Frame = +3 Query: 198 SHAAVFLAWWMVHCGGGLVAAVPPDGWYDYTAHTDCRGHPEPAQYNGGILKYGNGEDPNG 377 +HA++ + CG G D Y ++ D P QY GG G Sbjct: 448 NHASIIIWSLGNECGHG----ANHDAMYGWSKSFD---PSRPVQYEGG-----------G 489 Query: 378 YKTTETGVLSPAF--VVYNLNKSTM--YTFSGWVKLEGSSSALITARLAPDNSGTRCIGT 545 TT T ++ P + V ++ + Y+ W+ L G + LI A +G Sbjct: 490 ANTTATDIICPMYSRVDTDIKDDAVPKYSIKKWLSLPGETRPLILCEYA------HAMGN 543 Query: 546 VLAR-SDCW-AF-----LKGGFVLDWPTQ 611 L D W AF L+GGF+ DW Q Sbjct: 544 SLGSFDDYWQAFREYPRLQGGFIWDWVDQ 572
>Q5UQL0:YL410_MIMIV Putative core protein L410 - Mimivirus| Length = 661 Score = 32.7 bits (73), Expect = 6.0 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +2 Query: 1085 PEDLRSAVNTRIQSLMTRYRGEFAHWDVNNEMLHFNFYEQRLGPNATMDFFSVAQDA 1255 P D+ +N+ I L RYR + A W + ++ + N+Y+ + MD FS DA Sbjct: 284 PNDVVCEINSPIADLRNRYRVQIALWGIVMKLRNGNYYD-----SEAMDDFSKTLDA 335
>P53214:MTL1_YEAST Protein MTL1 precursor - Saccharomyces cerevisiae (Baker's yeast)| Length = 551 Score = 32.7 bits (73), Expect = 6.0 Identities = 70/270 (25%), Positives = 111/270 (41%), Gaps = 11/270 (4%) Frame = -3 Query: 1602 SCSAVQSMTPLTAGCAYASRSTCS----RYTACVCASNLLLMSISVNQ-----MGRLSVA 1450 S SAV+S T T + AS ST S +T+ +S+LL +S +++ ++S + Sbjct: 54 SLSAVESFTSSTDATSSASLSTPSIASVSFTSFPQSSSLLTLSSTLSSELSSSSMQVSSS 113 Query: 1449 SLSSTALM*GMLGLEKCPSRPIPSSTAPPARRSLSRATYASTVEEASSQVSTTLYSFMKS 1270 S SS++ S SST + SL T AST +S+ S+TL + Sbjct: 114 STSSSSSEVTSSSSSSSISPSSSSSTIISSSSSLPTFTVAST---SSTVASSTLSTSSSL 170 Query: 1269 VASGSASCATL-KKSMVALGPSRCS*KLKCSISLFTSQCANSPRYRVMRLWMRVFTADRR 1093 V S S+S T +S +L S S + S S +SP L T+ Sbjct: 171 VISTSSSTFTFSSESSSSLISSSISTSVSTSSVYVPSSSTSSPPSSSSEL-----TSSSY 225 Query: 1092 SSGDRPFTQRGVASWFSQKMLCPRTITRCDRTNASIWSGTSNRSSPDAGSVEYHLXXXSN 913 SS T +S FS +++S S +S+ SS + S Y Sbjct: 226 SSSSSSSTLFSYSSSFSS-------------SSSSSSSSSSSSSSSSSSSSSYF------ 266 Query: 912 TAALNAPRTISGTRRFPGWWRRSPT-PTGS 826 T + ++ +I + +P + S + PT S Sbjct: 267 TLSTSSSSSIYSSSSYPSFSSSSSSNPTSS 296
>P36795:VE2_HPV49 Regulatory protein E2 - Human papillomavirus type 49| Length = 488 Score = 32.3 bits (72), Expect = 7.8 Identities = 49/190 (25%), Positives = 72/190 (37%), Gaps = 2/190 (1%) Frame = -3 Query: 1389 PIPSSTAPPA--RRSLSRATYASTVEEASSQVSTTLYSFMKSVASGSASCATLKKSMVAL 1216 P+ SST P R S + + TV+E + + T +F + A+ +A+ A S Sbjct: 197 PVTSSTPPSTGLRESSNASPVHDTVDETPTSTTATTTTFSTTTATATATGAPELSSKTGT 256 Query: 1215 GPSRCS*KLKCSISLFTSQCANSPRYRVMRLWMRVFTADRRSSGDRPFTQRGVASWFSQK 1036 R K + A++ R V R R T RR R ++ SQK Sbjct: 257 RKGRYGRKDS------SPTAASNSRKEVSRRRSRSRTRTRR---------REASTSRSQK 301 Query: 1035 MLCPRTITRCDRTNASIWSGTSNRSSPDAGSVEYHLXXXSNTAALNAPRTISGTRRFPGW 856 R+ +R TS S GSV T+ ++P+ R G Sbjct: 302 ASRSRSRSR----------STSRGSRGSGGSV--------TTSRDSSPKRTRRGRGRGGR 343 Query: 855 WRRSPTPTGS 826 RRSPTPT + Sbjct: 344 SRRSPTPTST 353
>Q75EA2:MON1_ASHGO Vacuolar fusion protein MON1 - Ashbya gossypii (Yeast) (Eremothecium| gossypii) Length = 654 Score = 32.3 bits (72), Expect = 7.8 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 4/138 (2%) Frame = -3 Query: 1659 PTGRFLRFQSVRHIW*HPLSCSAVQSMTPLTAGCAYASRSTCSRYTA---CVCASNLLLM 1489 PTGRF R + W P CSA+ ++ LT S C + A VCA+ + Sbjct: 13 PTGRFWRPWAAWRHWWRPTGCSAISTIGSLTG-------SRCVAFVANDYAVCAAVKIRR 65 Query: 1488 SISVNQMGRLSVASLSSTALM*GMLGLEKCP-SRPIPSSTAPPARRSLSRATYASTVEEA 1312 ++G + S S + P + P+ S + + RS S T+A V + Sbjct: 66 PGGGGRLGMSTSGSRDSASTRESARETRAGPQALPLGSVVSLSSMRSAS-PTHAPWVAKP 124 Query: 1311 SSQVSTTLYSFMKSVASG 1258 ++ V T + FM+ A G Sbjct: 125 TTSVDLTNH-FMEVAARG 141 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 328,967,193 Number of extensions: 7489911 Number of successful extensions: 25766 Number of sequences better than 10.0: 48 Number of HSP's gapped: 25674 Number of HSP's successfully gapped: 48 Length of query: 684 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 564 Effective length of database: 67,771,039 Effective search space: 38222865996 Effective search space used: 38222865996 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
