| Clone Name | FLbaf148o06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133A10, full insert sequence Length = 2987 Score = 198 bits (100), Expect = 2e-47 Identities = 274/332 (82%) Strand = Plus / Plus Query: 252 accgacaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgt 311 |||| |||| ||||| ||||||||||||| | | |||||||| || ||||| ||| | | Sbjct: 2435 accggcaagtcaggggtgaccatgaagggatcaacgttgttgggtttgaagtgccaacat 2494 Query: 312 caccagattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccc 371 |||||||||||||||||| ||||||| |||| |||| ||||| |||| || || |||| Sbjct: 2495 caccagattcaagctacaacaaccctgttcctggaaatgaagatgaagctcgagagcccc 2554 Query: 372 cgctggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacg 431 | ||| ||||||||| |||||||| ||| | |||||||||| |||||||| || || Sbjct: 2555 cattggttcctcctcatctgcagcatacattattgagcttcccaccgagccaagatgatt 2614 Query: 432 cgagcagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggaga 491 | |||||||| |||| || || |||||| || |||||||||||||||||||| |||| Sbjct: 2615 caagcagccttcctccacctcaaaacgtggtactcaaccacctctacatagagaaagaga 2674 Query: 492 actcgagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccg 551 |||| ||||||||||||||||||||||| |||||| |||| | ||| |||| |||||| | Sbjct: 2675 actctagatccgtcgtcgccctggggattacccatcggttcagggcaaagtttgtgactg 2734 Query: 552 tcgtgctctacaagccggtacagaggcggtag 583 | ||||| |||||||| ||||| ||||||||| Sbjct: 2735 ttgtgctgtacaagcccgtacaaaggcggtag 2766
>ref|NM_001069537.1| Oryza sativa (japonica cultivar-group) Os09g0364900 (Os09g0364900) mRNA, complete cds Length = 712 Score = 190 bits (96), Expect = 5e-45 Identities = 273/332 (82%) Strand = Plus / Plus Query: 252 accgacaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgt 311 |||| |||| ||||| ||||||||||||| | | |||||||| || ||||| ||| | | Sbjct: 211 accggcaagtcaggggtgaccatgaagggatcaacgttgttgggtttgaagtgccaacat 270 Query: 312 caccagattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccc 371 |||||||||||||||||| ||||||| |||| |||| ||||| |||| || || |||| Sbjct: 271 caccagattcaagctacaacaaccctgttcctggaaatgaagatgaagctcgagagcccc 330 Query: 372 cgctggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacg 431 | ||| ||||||||| |||||||| ||| | |||||||||| || ||||| || || Sbjct: 331 cattggttcctcctcatctgcagcatacattattgagcttcccaccaagccaagatgatt 390 Query: 432 cgagcagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggaga 491 | |||||||| |||| || || |||||| || |||||||||||||||||||| |||| Sbjct: 391 caagcagccttcctccacctcaaaacgtggtactcaaccacctctacatagagaaagaga 450 Query: 492 actcgagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccg 551 |||| ||||||||||||||||||||||| |||||| |||| | ||| |||| |||||| | Sbjct: 451 actctagatccgtcgtcgccctggggattacccatcggttcagggcaaagtttgtgactg 510 Query: 552 tcgtgctctacaagccggtacagaggcggtag 583 | ||||| |||||||| ||||| ||||||||| Sbjct: 511 ttgtgctgtacaagcccgtacaaaggcggtag 542
>dbj|AK120754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006L01, full insert sequence Length = 713 Score = 190 bits (96), Expect = 5e-45 Identities = 273/332 (82%) Strand = Plus / Plus Query: 252 accgacaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgt 311 |||| |||| ||||| ||||||||||||| | | |||||||| || ||||| ||| | | Sbjct: 212 accggcaagtcaggggtgaccatgaagggatcaacgttgttgggtttgaagtgccaacat 271 Query: 312 caccagattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccc 371 |||||||||||||||||| ||||||| |||| |||| ||||| |||| || || |||| Sbjct: 272 caccagattcaagctacaacaaccctgttcctggaaatgaagatgaagctcgagagcccc 331 Query: 372 cgctggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacg 431 | ||| ||||||||| |||||||| ||| | |||||||||| || ||||| || || Sbjct: 332 cattggttcctcctcatctgcagcatacattattgagcttcccaccaagccaagatgatt 391 Query: 432 cgagcagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggaga 491 | |||||||| |||| || || |||||| || |||||||||||||||||||| |||| Sbjct: 392 caagcagccttcctccacctcaaaacgtggtactcaaccacctctacatagagaaagaga 451 Query: 492 actcgagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccg 551 |||| ||||||||||||||||||||||| |||||| |||| | ||| |||| |||||| | Sbjct: 452 actctagatccgtcgtcgccctggggattacccatcggttcagggcaaagtttgtgactg 511 Query: 552 tcgtgctctacaagccggtacagaggcggtag 583 | ||||| |||||||| ||||| ||||||||| Sbjct: 512 ttgtgctgtacaagcccgtacaaaggcggtag 543
>gb|DQ244504.1| Zea mays clone 8636 mRNA sequence Length = 765 Score = 182 bits (92), Expect = 1e-42 Identities = 257/312 (82%) Strand = Plus / Plus Query: 256 acaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgtcacc 315 |||||||| | |||||||||||||||| || ||||||||||| |||||||| | ||||| Sbjct: 188 acaaggcatgcatgaccatgaaggggtccacgttgttggatttgaagtcccgccttcacc 247 Query: 316 agattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccccgct 375 ||||| |||||| ||||||| |||| || | ||||||||||||||||| ||||| || Sbjct: 248 ggattccagctacgacaaccctgttcctgggaatgaagacgaaggccgggagcccccact 307 Query: 376 ggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacgcgag 435 | || ||||| ||||||||||| |||||||||||||| || ||||| ||||| |||| Sbjct: 308 gatgccacctcatctgcagcacacgctgctgagcttcccaccaagccaagacgagtcgag 367 Query: 436 cagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggagaactc 495 | || || | ||||||| ||||||| ||||||||||| ||||| ||||| |||||| | Sbjct: 368 cccgctgccccagccccagaccgtggttctgaaccacctttacatcgagaaagagaacac 427 Query: 496 gagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccgtcgt 555 ||| ||| | || || ||||||||||| || |||| ||||| |||| ||||||||||| Sbjct: 428 gaggtccatggttgctctggggatcacgcaccggttcaaggctaagttcgtgaccgtcgt 487 Query: 556 gctctacaagcc 567 ||| |||||||| Sbjct: 488 gctttacaagcc 499
>emb|CT834091.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055K17, full insert sequence Length = 778 Score = 182 bits (92), Expect = 1e-42 Identities = 272/332 (81%) Strand = Plus / Plus Query: 252 accgacaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgt 311 |||| |||| ||||| ||||||||||||| | | |||||||| || ||||| ||| | | Sbjct: 200 accggcaagtcaggggtgaccatgaagggatcaacgttgttgggtttgaagtgccaacat 259 Query: 312 caccagattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccc 371 |||||||||||||||||| ||||||| |||| |||| || || |||| || || |||| Sbjct: 260 caccagattcaagctacaacaaccctgttcctggaaatgaggatgaagctcgagagcccc 319 Query: 372 cgctggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacg 431 | ||| ||||||||| |||||||| ||| | |||||||||| || ||||| || || Sbjct: 320 cattggttcctcctcatctgcagcatacattattgagcttcccaccaagccaagatgatt 379 Query: 432 cgagcagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggaga 491 | |||||||| |||| || || |||||| || |||||||||||||||||||| |||| Sbjct: 380 caagcagccttcctccacctcaaaacgtggtactcaaccacctctacatagagaaagaga 439 Query: 492 actcgagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccg 551 |||| ||||||||||||||||||||||| |||||| |||| | ||| |||| |||||| | Sbjct: 440 actctagatccgtcgtcgccctggggattacccatcggttcagggcaaagtttgtgactg 499 Query: 552 tcgtgctctacaagccggtacagaggcggtag 583 | ||||| |||||||| ||||| ||||||||| Sbjct: 500 ttgtgctgtacaagcccgtacaaaggcggtag 531
>emb|CT834090.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA018F13, full insert sequence Length = 710 Score = 182 bits (92), Expect = 1e-42 Identities = 272/332 (81%) Strand = Plus / Plus Query: 252 accgacaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgt 311 |||| |||| ||||| ||||||||||||| | | |||||||| || ||||| ||| | | Sbjct: 174 accggcaagtcaggggtgaccatgaagggatcaacgttgttgggtttgaagtgccaacat 233 Query: 312 caccagattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccc 371 |||||||||||||||||| ||||||| |||| |||| || || |||| || || |||| Sbjct: 234 caccagattcaagctacaacaaccctgttcctggaaatgaggatgaagctcgagagcccc 293 Query: 372 cgctggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacg 431 | ||| ||||||||| |||||||| ||| | |||||||||| || ||||| || || Sbjct: 294 cattggttcctcctcatctgcagcatacattattgagcttcccaccaagccaagatgatt 353 Query: 432 cgagcagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggaga 491 | |||||||| |||| || || |||||| || |||||||||||||||||||| |||| Sbjct: 354 caagcagccttcctccacctcaaaacgtggtactcaaccacctctacatagagaaagaga 413 Query: 492 actcgagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccg 551 |||| ||||||||||||||||||||||| |||||| |||| | ||| |||| |||||| | Sbjct: 414 actctagatccgtcgtcgccctggggattacccatcggttcagggcaaagtttgtgactg 473 Query: 552 tcgtgctctacaagccggtacagaggcggtag 583 | ||||| |||||||| ||||| ||||||||| Sbjct: 474 ttgtgctgtacaagcccgtacaaaggcggtag 505
>dbj|AB110222.1| Oryza sativa (japonica cultivar-group) OSKbeta3 mRNA for beta subunit 3 of SnRK1, complete cds Length = 727 Score = 182 bits (92), Expect = 1e-42 Identities = 272/332 (81%) Strand = Plus / Plus Query: 252 accgacaaggcagggatgaccatgaaggggtgcaggttgttggattcgaagtcccagcgt 311 |||| |||| ||||| ||||||||||||| | | |||||||| || ||||| ||| | | Sbjct: 199 accggcaagtcaggggtgaccatgaagggatcaacgttgttgggtttgaagtgccaacat 258 Query: 312 caccagattcaagctacagcaaccctattccaggaagcgaagacgaaggccgggaacccc 371 |||||||||||||||||| ||||||| |||| |||| ||||| |||| || || |||| Sbjct: 259 caccagattcaagctacaacaaccctgttcctggaaatgaagatgaagctcgagagcccc 318 Query: 372 cgctggctcctcctcacctgcagcacacactgctgagcttcccgccgagccatgacgacg 431 | ||| ||||||||| |||||||| ||| | |||||||||| || ||||| || || Sbjct: 319 cattggttcctcctcatctgcagcatacattattgagcttcccaccaagccaagatgatt 378 Query: 432 cgagcagcctccctctgccccagcccgtggtgctgaaccacctctacatagagaaggaga 491 | |||||||| |||| || || |||||| || |||||||||||||||||||| |||| Sbjct: 379 caagcagccttcctccacctcaaaacgtggtactcaaccacctctacatagagaaagaga 438 Query: 492 actcgagatccgtcgtcgccctggggatcacccataggtttaaggccaagtatgtgaccg 551 ||| ||||||||||||||||||||||| |||||| |||| | ||| |||| |||||| | Sbjct: 439 actttagatccgtcgtcgccctggggattacccatcggttcagggcaaagtttgtgactg 498 Query: 552 tcgtgctctacaagccggtacagaggcggtag 583 | ||||| |||||||| ||||| ||||||||| Sbjct: 499 ttgtgctgtacaagcccgtacaaaggcggtag 530
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 176 bits (89), Expect = 8e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 287 gttgttggattcgaagtcccagcgtcaccagattcaagctacagcaaccctattccagga 346 |||||||| || ||||| ||| | ||||||||||||||||||| ||||||| |||| ||| Sbjct: 11935270 gttgttgggtttgaagtgccaacatcaccagattcaagctacaacaaccctgttcctgga 11935329 Query: 347 agcgaagacgaaggccgggaacccccgctggctcctcctcacctgcagcacacactgctg 406 | ||||| |||| || || ||||| ||| ||||||||| |||||||| ||| | || Sbjct: 11935330 aatgaagatgaagctcgagagcccccattggttcctcctcatctgcagcatacattattg 11935389 Query: 407 agcttcccgccgagccatgacgacgcgagcagcctccctctgccccagcccgtggtgctg 466 |||||||| || ||||| || || | |||||||| |||| || || |||||| || Sbjct: 11935390 agcttcccaccaagccaagatgattcaagcagccttcctccacctcaaaacgtggtactc 11935449 Query: 467 aaccacctctacatagagaaggagaactcgagatccgtcgtcgccctggggatcacccat 526 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 11935450 aaccacctctacatagagaaagagaactctagatccgtcgtcgccctggggattacccat 11935509 Query: 527 aggtttaaggccaagtatgtgaccgtcgtgctctacaagccggtacagaggcggtag 583 |||| | ||| |||| |||||| || ||||| |||||||| ||||| ||||||||| Sbjct: 11935510 cggttcagggcaaagtttgtgactgttgtgctgtacaagcccgtacaaaggcggtag 11935566
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 176 bits (89), Expect = 8e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 287 gttgttggattcgaagtcccagcgtcaccagattcaagctacagcaaccctattccagga 346 |||||||| || ||||| ||| | ||||||||||||||||||| ||||||| |||| ||| Sbjct: 116760 gttgttgggtttgaagtgccaacatcaccagattcaagctacaacaaccctgttcctgga 116819 Query: 347 agcgaagacgaaggccgggaacccccgctggctcctcctcacctgcagcacacactgctg 406 | ||||| |||| || || ||||| ||| ||||||||| |||||||| ||| | || Sbjct: 116820 aatgaagatgaagctcgagagcccccattggttcctcctcatctgcagcatacattattg 116879 Query: 407 agcttcccgccgagccatgacgacgcgagcagcctccctctgccccagcccgtggtgctg 466 |||||||| || ||||| || || | |||||||| |||| || || |||||| || Sbjct: 116880 agcttcccaccaagccaagatgattcaagcagccttcctccacctcaaaacgtggtactc 116939 Query: 467 aaccacctctacatagagaaggagaactcgagatccgtcgtcgccctggggatcacccat 526 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 116940 aaccacctctacatagagaaagagaactctagatccgtcgtcgccctggggattacccat 116999 Query: 527 aggtttaaggccaagtatgtgaccgtcgtgctctacaagccggtacagaggcggtag 583 |||| | ||| |||| |||||| || ||||| |||||||| ||||| ||||||||| Sbjct: 117000 cggttcagggcaaagtttgtgactgttgtgctgtacaagcccgtacaaaggcggtag 117056
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 176 bits (89), Expect = 8e-41 Identities = 245/297 (82%) Strand = Plus / Plus Query: 287 gttgttggattcgaagtcccagcgtcaccagattcaagctacagcaaccctattccagga 346 |||||||| || ||||| ||| | ||||||||||||||||||| ||||||| |||| ||| Sbjct: 39750 gttgttgggtttgaagtgccaacatcaccagattcaagctacaacaaccctgttcctgga 39809 Query: 347 agcgaagacgaaggccgggaacccccgctggctcctcctcacctgcagcacacactgctg 406 | ||||| |||| || || ||||| ||| ||||||||| |||||||| ||| | || Sbjct: 39810 aatgaagatgaagctcgagagcccccattggttcctcctcatctgcagcatacattattg 39869 Query: 407 agcttcccgccgagccatgacgacgcgagcagcctccctctgccccagcccgtggtgctg 466 |||||||| || ||||| || || | |||||||| |||| || || |||||| || Sbjct: 39870 agcttcccaccaagccaagatgattcaagcagccttcctccacctcaaaacgtggtactc 39929 Query: 467 aaccacctctacatagagaaggagaactcgagatccgtcgtcgccctggggatcacccat 526 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 39930 aaccacctctacatagagaaagagaactctagatccgtcgtcgccctggggattacccat 39989 Query: 527 aggtttaaggccaagtatgtgaccgtcgtgctctacaagccggtacagaggcggtag 583 |||| | ||| |||| |||||| || ||||| |||||||| ||||| ||||||||| Sbjct: 39990 cggttcagggcaaagtttgtgactgttgtgctgtacaagcccgtacaaaggcggtag 40046
>emb|CT983875.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 346 Score = 46.1 bits (23), Expect = 0.20 Identities = 38/43 (88%) Strand = Plus / Plus Query: 524 cataggtttaaggccaagtatgtgaccgtcgtgctctacaagc 566 ||||||||| || |||||||||| || || ||||||||||||| Sbjct: 164 cataggtttcagtccaagtatgtaactgttgtgctctacaagc 206
>emb|AL355384.6| Human DNA sequence from clone RP11-626C11 on chromosome 10 Contains a CpG island, complete sequence Length = 159305 Score = 46.1 bits (23), Expect = 0.20 Identities = 23/23 (100%) Strand = Plus / Minus Query: 681 tcctggagaaacagagatgatgc 703 ||||||||||||||||||||||| Sbjct: 124245 tcctggagaaacagagatgatgc 124223
>gb|DQ995512.1| Hordeum vulgare clone 604d05_c-100 genomic sequence Length = 16633 Score = 44.1 bits (22), Expect = 0.77 Identities = 25/26 (96%) Strand = Plus / Plus Query: 539 aagtatgtgaccgtcgtgctctacaa 564 |||||||||| ||||||||||||||| Sbjct: 5833 aagtatgtgaacgtcgtgctctacaa 5858
>ref|XM_500283.1| Yarrowia lipolytica CLIB122, YALI0A20372g predicted mRNA Length = 2613 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 249 accaccgacaaggcagggatga 270 |||||||||||||||||||||| Sbjct: 698 accaccgacaaggcagggatga 677
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 cggccgccaccccgccagatcc 74 |||||||||||||||||||||| Sbjct: 6482072 cggccgccaccccgccagatcc 6482051
>gb|AC117498.6| Homo sapiens 12 BAC RP11-579D7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144383 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 369 ccccgctggctcctcctcacct 390 |||||||||||||||||||||| Sbjct: 24247 ccccgctggctcctcctcacct 24268
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 cggccgccaccccgccagatcc 74 |||||||||||||||||||||| Sbjct: 124065 cggccgccaccccgccagatcc 124044
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 cggccgccaccccgccagatcc 74 |||||||||||||||||||||| Sbjct: 42685 cggccgccaccccgccagatcc 42664
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 249 accaccgacaaggcagggatga 270 |||||||||||||||||||||| Sbjct: 2190038 accaccgacaaggcagggatga 2190059
>gb|AC133502.4| Mus musculus chromosome 7 clone RP24-290G20, complete sequence Length = 160238 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 ctggctcctcctcacctgcag 394 ||||||||||||||||||||| Sbjct: 102092 ctggctcctcctcacctgcag 102112
>gb|AC005167.3| Arabidopsis thaliana chromosome 2 clone F12A24 map mi398, complete sequence Length = 93861 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 706 ttcattctcaaatgatttggtcatg 730 |||||||||||||| |||||||||| Sbjct: 21935 ttcattctcaaatgttttggtcatg 21959
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 agcctccctctgccccagccc 457 ||||||||||||||||||||| Sbjct: 88733 agcctccctctgccccagccc 88713
>gb|AC092668.2| Homo sapiens BAC clone RP11-553F8 from 4, complete sequence Length = 167570 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 678 tagtcctggagaaacagagat 698 ||||||||||||||||||||| Sbjct: 110357 tagtcctggagaaacagagat 110377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cggccgccaccccgccagatc 73 ||||||||||||||||||||| Sbjct: 9885815 cggccgccaccccgccagatc 9885835
>emb|AL391666.5| Human DNA sequence from clone RP13-130D24 on chromosome Xq21.31-22.1 Contains a karyopherin (importin) beta 1 (KPNB1) pseudogene, complete sequence Length = 147080 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 678 tagtcctggagaaacagagat 698 ||||||||||||||||||||| Sbjct: 66692 tagtcctggagaaacagagat 66672
>gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, complete sequence Length = 154169 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cagcctccctctgccccagcc 456 ||||||||||||||||||||| Sbjct: 115485 cagcctccctctgccccagcc 115505
>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence Length = 199721 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 cagcctccctctgccccagcc 456 ||||||||||||||||||||| Sbjct: 53020 cagcctccctctgccccagcc 53000
>dbj|AP005201.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0685B06 Length = 140293 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cggccgccaccccgccagatc 73 ||||||||||||||||||||| Sbjct: 15347 cggccgccaccccgccagatc 15367
>dbj|AP005102.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0033J14 Length = 158233 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 cggccgccaccccgccagatc 73 ||||||||||||||||||||| Sbjct: 131855 cggccgccaccccgccagatc 131875
>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete sequence Length = 226754 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 436 cagcctccctctgccccagcc 456 ||||||||||||||||||||| Sbjct: 140390 cagcctccctctgccccagcc 140410 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 121,204,381 Number of extensions: 6615597 Number of successful extensions: 138835 Number of sequences better than 10.0: 30 Number of HSP's gapped: 138825 Number of HSP's successfully gapped: 30 Length of query: 812 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 790 Effective length of database: 18,508,616,841 Effective search space: 14621807304390 Effective search space used: 14621807304390 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)