ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf146f22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os08g0223700:Os08g0223700 32 0.54
2AK062878:Os11g0656700 30 2.1
3AK105793:Os02g0567800 29 3.5
4AK070262:Os02g0282600 28 4.6
5Os07g0228700:Os07g0228700 28 7.8
6AK071261:Os01g0748100 28 7.8

>Os08g0223700:Os08g0223700 |
          Length = 1424
 Score = 31.6 bits (70), Expect = 0.54
 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = -1

Query: 686 FIPYKPEKAVIGVIHP*PVMKISYSTRNDPP-PTCE--TRGD*PDTV*IPCKQLRKFLQA 516
           F+ Y+P K  +G+ HP PV++ S  +   PP PT +     +  +T  + C Q+   + A
Sbjct: 222 FMDYRPPKLSLGLPHPDPVVETSSLSAVQPPEPTYDLTIMDELDETKVLSCLQIETIVYA 281

Query: 515 TSTKIHYSTT 486
           +   +++  T
Sbjct: 282 SQRHLYHLPT 291



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>AK062878:Os11g0656700 |
          Length = 134

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 211 GERVVAAAARSLEREVAARSLEREVAARWRG 119
           GE  V+AA   L+RE   + +ERE+A R  G
Sbjct: 68  GELAVSAAVHELDREPLGKEMERELARRLYG 98



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>AK105793:Os02g0567800 |
          Length = 320

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 96  LVRPWSTSCRDAGEESPSRHGRGEKVGPW 10
           L+ PW       GEE+P   GR    G W
Sbjct: 188 LIHPWFWGSEAVGEEAPDPEGRARGAGLW 216



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>AK070262:Os02g0282600 |
          Length = 190

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +3

Query: 9   PTVPPFPLSRAGSGSPRLRLCSSCSMAALVRRAATSLP 122
           P V   PL  A SG PR +LC       LV  A  S P
Sbjct: 62  PPVASAPLHHARSGGPRRQLCPMAPPTTLVGCAIDSAP 99



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>Os07g0228700:Os07g0228700 |
          Length = 111

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -2

Query: 148 EREVAARWRGREVAARRTSAA 86
           ER  A  WRGR V  RRT AA
Sbjct: 55  ERAHATAWRGRGVGRRRTKAA 75



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>AK071261:Os01g0748100 |
          Length = 101

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +3

Query: 12  TVPPFPLSRAGSGSPRLRLCSSCSMAALVRRAA 110
           +VPP P S  GSGS R       S  A VR AA
Sbjct: 8   SVPPSPSSPHGSGSGRAVAPDEASTVAAVRHAA 40


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,515,235
Number of extensions: 358274
Number of successful extensions: 1133
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1131
Number of HSP's successfully gapped: 6
Length of query: 232
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 135
Effective length of database: 11,515,878
Effective search space: 1554643530
Effective search space used: 1554643530
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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