ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf146f22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6NE98:GIDB_CORDI Methyltransferase gidB - Corynebacterium dipht... 30 8.7

>Q6NE98:GIDB_CORDI Methyltransferase gidB - Corynebacterium diphtheriae|
          Length = 223
 Score = 30.0 bits (66), Expect = 8.7
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 589 HAKHEEINQIQSEFLASNLGSSYKLHPQRSIT-ARRCFPGPR 467
           H KHEEI  I S     N+  +Y  H   +   + R F GPR
Sbjct: 12  HVKHEEIESIASHVFGGNVDKAYAYHELLATDGSTRGFIGPR 53


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 101,783,398
Number of extensions: 1962331
Number of successful extensions: 4813
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4811
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 122
Effective length of database: 70,513,989
Effective search space: 8602706658
Effective search space used: 8602706658
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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