| Clone Name | FLbaf148m08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069018:Os10g0573100 | 403 | e-113 | 2 | AK119335:Os02g0589500 | 30 | 2.8 | 3 | Os02g0152000:Os02g0152000 | 29 | 6.3 | 4 | AK121818:Os07g0169600 | 28 | 8.2 | 5 | AK060318:Os07g0169600 | 28 | 8.2 |
|---|
>AK069018:Os10g0573100 | Length = 217 Score = 403 bits (1036), Expect = e-113 Identities = 193/216 (89%), Positives = 204/216 (94%), Gaps = 3/216 (1%) Frame = +3 Query: 126 MVVATEEMAVYCFDTLVAHYSGEQPPPPAFDEGVHPLFVTWKKATNGSEPRLRGCIGTLE 305 MVVATEEMAVYCFD LV+HYSG+QPPPPAF+EG+HPLFVTWKKATNGSEPRLRGCIGTLE Sbjct: 1 MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGIHPLFVTWKKATNGSEPRLRGCIGTLE 60 Query: 306 PRQIVSGFKDYALTSALRDRRFSPIQSKELPYLECTVSILTEYETALNYLDWEVGKHGLI 485 RQIV+GFK+YALTSALRDRRF PIQSKELPYLECTVSILTEYETALN+LDWEVGKHGLI Sbjct: 61 ARQIVTGFKEYALTSALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVGKHGLI 120 Query: 486 IEFTDPDYNVRRSGTYLPEVAAHEGWTQLEAIDSLMRKAGYNGTITESLRKKIRVTRYQS 665 IEFTDPDYN+RRS TYLPEVAAHEGWT LE IDSLMRKAGYNGTIT+SLRKK+RVTRYQS Sbjct: 121 IEFTDPDYNMRRSATYLPEVAAHEGWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQS 180 Query: 666 TLYTMQYGEYTAYVKKNRG---EINGASIVNGFKPG 764 TLYTM YGEY AYVKKNRG EINGA I+NGFKPG Sbjct: 181 TLYTMHYGEYAAYVKKNRGAAPEINGAPIINGFKPG 216
>AK119335:Os02g0589500 | Length = 195 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Frame = +2 Query: 839 VWKNQFLPLICHHA--FRSKECGVPCQRPPCH 928 ++K LP HH F S +PCQ PPCH Sbjct: 84 LYKTTRLPFPPHHRALFFSLSLSLPCQPPPCH 115
>Os02g0152000:Os02g0152000 | Length = 118 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -3 Query: 289 HPLRRGSEPLVAFFQVTNSGWTPSSKAGGGG 197 HPLRR PL F + +PS +AGGGG Sbjct: 92 HPLRRPPPPLPPF----DPSESPSERAGGGG 118
>AK121818:Os07g0169600 | Length = 340 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/60 (26%), Positives = 24/60 (40%) Frame = -2 Query: 788 LLQTDKSLAWFESINYGCPVNFTSVLLDICSIFTVLHGVQGTLVAGDADFLPQRLSDGAI 609 +L K L +F+ +N+G P + +C F L DA+ P RL I Sbjct: 57 VLDAGKELGFFQVVNHGVPPETMREMAAVCEEFFRLPAEDKAAFYSDAEENPNRLFSSTI 116
>AK060318:Os07g0169600 | Length = 340 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/60 (26%), Positives = 24/60 (40%) Frame = -2 Query: 788 LLQTDKSLAWFESINYGCPVNFTSVLLDICSIFTVLHGVQGTLVAGDADFLPQRLSDGAI 609 +L K L +F+ +N+G P + +C F L DA+ P RL I Sbjct: 57 VLDAGKELGFFQVVNHGVPPETMREMAAVCEEFFRLPAEDKAAFYSDAEENPNRLFSSTI 116 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 27,242,622 Number of extensions: 640284 Number of successful extensions: 1695 Number of sequences better than 10.0: 5 Number of HSP's gapped: 1694 Number of HSP's successfully gapped: 5 Length of query: 348 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 246 Effective length of database: 11,315,673 Effective search space: 2783655558 Effective search space used: 2783655558 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)