ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf148m08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK069018:Os10g0573100 403 e-113
2AK119335:Os02g0589500 30 2.8
3Os02g0152000:Os02g0152000 29 6.3
4AK121818:Os07g0169600 28 8.2
5AK060318:Os07g0169600 28 8.2

>AK069018:Os10g0573100 |
          Length = 217
 Score =  403 bits (1036), Expect = e-113
 Identities = 193/216 (89%), Positives = 204/216 (94%), Gaps = 3/216 (1%)
 Frame = +3

Query: 126 MVVATEEMAVYCFDTLVAHYSGEQPPPPAFDEGVHPLFVTWKKATNGSEPRLRGCIGTLE 305
           MVVATEEMAVYCFD LV+HYSG+QPPPPAF+EG+HPLFVTWKKATNGSEPRLRGCIGTLE
Sbjct: 1   MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGIHPLFVTWKKATNGSEPRLRGCIGTLE 60

Query: 306 PRQIVSGFKDYALTSALRDRRFSPIQSKELPYLECTVSILTEYETALNYLDWEVGKHGLI 485
            RQIV+GFK+YALTSALRDRRF PIQSKELPYLECTVSILTEYETALN+LDWEVGKHGLI
Sbjct: 61  ARQIVTGFKEYALTSALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVGKHGLI 120

Query: 486 IEFTDPDYNVRRSGTYLPEVAAHEGWTQLEAIDSLMRKAGYNGTITESLRKKIRVTRYQS 665
           IEFTDPDYN+RRS TYLPEVAAHEGWT LE IDSLMRKAGYNGTIT+SLRKK+RVTRYQS
Sbjct: 121 IEFTDPDYNMRRSATYLPEVAAHEGWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQS 180

Query: 666 TLYTMQYGEYTAYVKKNRG---EINGASIVNGFKPG 764
           TLYTM YGEY AYVKKNRG   EINGA I+NGFKPG
Sbjct: 181 TLYTMHYGEYAAYVKKNRGAAPEINGAPIINGFKPG 216



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>AK119335:Os02g0589500 |
          Length = 195

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 839 VWKNQFLPLICHHA--FRSKECGVPCQRPPCH 928
           ++K   LP   HH   F S    +PCQ PPCH
Sbjct: 84  LYKTTRLPFPPHHRALFFSLSLSLPCQPPPCH 115



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>Os02g0152000:Os02g0152000 |
          Length = 118

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 289 HPLRRGSEPLVAFFQVTNSGWTPSSKAGGGG 197
           HPLRR   PL  F    +   +PS +AGGGG
Sbjct: 92  HPLRRPPPPLPPF----DPSESPSERAGGGG 118



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>AK121818:Os07g0169600 |
          Length = 340

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = -2

Query: 788 LLQTDKSLAWFESINYGCPVNFTSVLLDICSIFTVLHGVQGTLVAGDADFLPQRLSDGAI 609
           +L   K L +F+ +N+G P      +  +C  F  L          DA+  P RL    I
Sbjct: 57  VLDAGKELGFFQVVNHGVPPETMREMAAVCEEFFRLPAEDKAAFYSDAEENPNRLFSSTI 116



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>AK060318:Os07g0169600 |
          Length = 340

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = -2

Query: 788 LLQTDKSLAWFESINYGCPVNFTSVLLDICSIFTVLHGVQGTLVAGDADFLPQRLSDGAI 609
           +L   K L +F+ +N+G P      +  +C  F  L          DA+  P RL    I
Sbjct: 57  VLDAGKELGFFQVVNHGVPPETMREMAAVCEEFFRLPAEDKAAFYSDAEENPNRLFSSTI 116


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 27,242,622
Number of extensions: 640284
Number of successful extensions: 1695
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1694
Number of HSP's successfully gapped: 5
Length of query: 348
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 246
Effective length of database: 11,315,673
Effective search space: 2783655558
Effective search space used: 2783655558
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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