ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf148m08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os10g42250:12010.t03454:unspliced-genomic expressed protein 122 7e-93
2LOC_Os11g13620:12011.t04315:unspliced-genomic expressed protein 37 0.19
3LOC_Os08g01960:12008.t00095:unspliced-genomic conserved hypo... 37 0.19
4LOC_Os03g25600:12003.t02258:unspliced-genomic POL, putative,... 37 0.19
5LOC_Os11g39060:12011.t03449:unspliced-genomic hypothetical p... 35 0.68
6LOC_Os01g32364:12001.t02813:unspliced-genomic non-cyanogenic... 34 1.8
7LOC_Os10g25502:12010.t01968:unspliced-genomic retrotransposo... 34 2.4
8LOC_Os09g03870:12009.t00283:unspliced-genomic retrotransposo... 34 2.4
9LOC_Os06g05790:12006.t00465:unspliced-genomic transferase, p... 33 3.3
10LOC_Os02g12870:12002.t01084:unspliced-genomic expressed protein 33 3.3
11LOC_Os12g33270:12012.t03019:unspliced-genomic hypothetical p... 33 4.5
12LOC_Os06g45020:12006.t04189:unspliced-genomic LRR receptor-l... 25 5.5
13LOC_Os01g52000:12001.t04628:unspliced-genomic retrotransposo... 25 5.6
14LOC_Os12g16210:12012.t01474:unspliced-genomic metal ion bind... 32 6.2
15LOC_Os11g43590:12011.t03889:unspliced-genomic ranGAP1 intera... 32 6.2
16LOC_Os07g39410:12007.t03602:unspliced-genomic retrotransposo... 32 6.2
17LOC_Os02g36390:12002.t03276:unspliced-genomic nucleotide-sug... 32 6.2
18LOC_Os01g16620:12001.t01511:unspliced-genomic expressed protein 32 6.2
19LOC_Os09g36140:12009.t03090:unspliced-genomic RNA recognitio... 27 8.1
20LOC_Os09g35960:12009.t03074:unspliced-genomic GTPase activat... 32 8.6
21LOC_Os05g32030:12005.t02799:unspliced-genomic conserved hypo... 32 8.6
22LOC_Os02g49870:12002.t04571:unspliced-genomic expressed protein 32 8.6
23LOC_Os01g34040:12001.t02969:unspliced-genomic retrotransposo... 32 8.6
24LOC_Os05g27000:12005.t02354:unspliced-genomic expressed protein 32 8.6
25LOC_Os01g63050:12001.t05676:unspliced-genomic expressed protein 26 9.8

>LOC_Os10g42250:12010.t03454:unspliced-genomic expressed protein|
          Length = 2497
 Score =  122 bits (262), Expect(7) = 7e-93
 Identities = 49/55 (89%), Positives = 51/55 (92%)
 Frame = +3 / +3

                                                                   
Query: 558  GWTQLEAIDSLMRKAGYNGTITESLRKKIRVTRYQSTLYTMQYGEYTAYVKKNRG 722
            GWT LE IDSLMRKAGYNGTIT+SLRKK+RVTRYQSTLYTM YGEY AYVKKNRG
Sbjct: 1980 GWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQSTLYTMHYGEYAAYVKKNRG 2144



 Score = 96.4 bits (204), Expect(7) = 7e-93
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = +3 / +3

                                                           
Query: 348  SALRDRRFSPIQSKELPYLECTVSILTEYETALNYLDWEVGKHGLII 488
            SALRDRRF PIQSKELPYLECTVSILTEYETALN+LDWEV  + L++
Sbjct: 1242 SALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVCNYTLVL 1382



 Score = 79.9 bits (168), Expect(7) = 7e-93
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3 / +2

                                             
Query: 126 MVVATEEMAVYCFDTLVAHYSGEQPPPPAFDEGV 227
           MVVATEEMAVYCFD LV+HYSG+QPPPPAF+EG+
Sbjct: 128 MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGI 229



 Score = 66.1 bits (138), Expect(7) = 7e-93
 Identities = 25/36 (69%), Positives = 26/36 (72%)
 Frame = +2 / +2

                                                
Query: 236  VCHLEEGYQWFRATPKGMHRNFGAPSDCKRLQGLRA 343
            VCHLEEGYQWFR TP  MH N G  SDC  LQG+ A
Sbjct: 956  VCHLEEGYQWFRTTPSRMHWNLGGSSDCHWLQGVCA 1063



 Score = 46.4 bits (95), Expect(7) = 7e-93
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +2 / +2

                                         
Query: 473  AWFNY*VHRS*L*CKTEWNIFT*GCCP*R 559
            AW NY*+H S L* + + N+FT*GCCP*R
Sbjct: 1433 AWVNY*IH*SRL*HEAQCNLFT*GCCP*R 1519



 Score = 30.4 bits (60), Expect(7) = 7e-93
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +2 / +2

                              
Query: 725  N*RGIHS*WIQTRPVIYL 778
            N*RG ++*W+QTRP+ +L
Sbjct: 2156 N*RGTYN*WLQTRPLNHL 2209



 Score = 26.7 bits (52), Expect(7) = 7e-93
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3 / +1

                        
Query: 816  GSNWCENLFGKI 851
            GS W ENLFGK+
Sbjct: 2245 GSTWGENLFGKL 2280



 Score =  106 bits (227), Expect(7) = 3e-89
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = -3 / -1

                                                                     
Query: 724  SPLFFLTYAVYSPYCMVYRVLW*RVTRIFFLKDSVMVPL*PAFLMSESIASSCVHPS 554
            +PLFFLT A YSP C+VY+VLW*RVTR FFLK+SVMVPL*PAFL+SES+ S CVHP+
Sbjct: 2146 APLFFLT*AAYSP*CIVYKVLW*RVTRSFFLKESVMVPL*PAFLISESMVSRCVHPA 1976



 Score = 80.3 bits (169), Expect(7) = 3e-89
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -3 / -1

                                                    
Query: 349  LVSA*SLKPLTI*RGSKVPMHPLRRGSEPLVAFFQVTNSG 230
            LVSA SLKP+TI*R SKVPMHP RRGSEPLVAFFQVTN+G
Sbjct: 1069 LVSAYSLKPVTI*RASKVPMHPRRRGSEPLVAFFQVTNNG 950



 Score = 77.1 bits (162), Expect(7) = 3e-89
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3 / -1

                                                    
Query: 466  TSQSR*LSAVSYSVNIETVHSKYGSSLDCIGEKRRSLRAL 347
            TSQSR LSAVSYSV+I+TVHSKYGSS DCIG KRRSL AL
Sbjct: 1360 TSQSRWLSAVSYSVSIDTVHSKYGSSFDCIGGKRRSLNAL 1241



 Score = 72.1 bits (151), Expect(7) = 3e-89
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -3 / -2

                                               
Query: 229 WTPSSKAGGGGCSPL*WATRVSKQ*TAISSVATTIV 122
           W PSSKAGGGG SPL*W TR SKQ*TAISSVATTI+
Sbjct: 231 WMPSSKAGGGGWSPL*WETRASKQ*TAISSVATTIL 124



 Score = 47.8 bits (98), Expect(7) = 3e-89
 Identities = 20/32 (62%), Positives = 22/32 (68%)
 Frame = -1 / -2

                                            
Query: 558  LHGQQPQVNMFHSVLHYSQDR*TQ*LNHAFQP 463
            LHGQQPQVN  H    YS D+* Q*L HA+ P
Sbjct: 1518 LHGQQPQVNKLHCASCYSLDQ*IQ*LTHAYPP 1423



 Score = 44.1 bits (90), Expect(7) = 3e-89
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -2 / -3

                               
Query: 779  TDKSLAWFESINYGCPVNF 723
            TD S+AWFE+INY CPVNF
Sbjct: 2210 TDDSMAWFEAINYRCPVNF 2154



 Score = 28.1 bits (55), Expect(7) = 3e-89
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -3 / -3

                                 
Query: 847  FPNKFSHQLLPSQIINNYITC 785
            FPNKFS Q+LP ++ +++  C
Sbjct: 2276 FPNKFSPQVLPDKL*SHFR*C 2214



 Score = 89.5 bits (189), Expect(7) = 4e-61
 Identities = 36/55 (65%), Positives = 45/55 (81%)
 Frame = -2 / -3

                                                                   
Query: 722  TSVLLDICSIFTVLHGVQGTLVAGDADFLPQRLSDGAIVAGLPHERVNSL*LCPS 558
            +SVLLD+ S+FT++H VQGTLVAGD +FLPQR+  G IV  LPH+ VN L*+CPS
Sbjct: 2144 SSVLLDVGSVFTIVHSVQGTLVAGDTEFLPQRVGYGTIVTCLPHQ*VNGL*MCPS 1980



 Score = 68.4 bits (143), Expect(7) = 4e-61
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -2 / -3

                                                               
Query: 485  N*TMLSNLPIKVVECSFVFSQYRNRAFQIRQLFGLYRRKAPIPQGTGQRVI 333
            N  +++ LP+KVV+CSF+F QYR    QIRQ F LYRRKA +PQ T +  I
Sbjct: 1379 NQCVVAYLPVKVVKCSFIFGQYRYCTLQIRQFFRLYRRKAAVPQCTAREYI 1227



 Score = 64.8 bits (135), Expect(7) = 4e-61
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -2 / -3

                                                    
Query: 344  QRVILEAAYNLTGLQSSDASP*AWLGTIGSLLPGDKQWVD 225
            +R++LEA+ NLT LQ S+AS  AW  TIGSLLPGDKQW +
Sbjct: 1064 ERILLEASDNLTSLQGSNASSKAWF*TIGSLLPGDKQWAE 945



 Score = 43.7 bits (89), Expect(7) = 4e-61
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = -2 / -3

                                             
Query: 560  SFMGSNLR*ICSTPSYIIVRIGELNN*TMLSNL 462
            +FMGSNLR*I  T  ++IV I E NN* ML++L
Sbjct: 1520 TFMGSNLR*ISCTAPHVIVWISEFNN*PMLTHL 1422



 Score = 36.8 bits (74), Expect(7) = 4e-61
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = -2 / -1

                                           
Query: 230 VDALVEGGRRRLLXXXXXXXXXXXXDRHFLRG 135
           +DAL+EGGRRRL+            DRHFLRG
Sbjct: 232 LDALLEGGRRRLVAAVVGDEGVEAVDRHFLRG 137



 Score = 32.2 bits (64), Expect(7) = 4e-61
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3 / -1

                               
Query: 778  QINHWPGLNPLTMDAPLIS 722
            Q+  WPGL PL + APLIS
Sbjct: 2209 QMIQWPGLKPLIIGAPLIS 2153



 Score = 24.9 bits (48), Expect(7) = 4e-61
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1 / -1

                              
Query: 846  FQTNSHTNCFQAKL*III 793
            FQTNSH  C Q    +I+
Sbjct: 2275 FQTNSHPRCSQINYKVIL 2222



 Score = 93.2 bits (197), Expect(4) = 2e-51
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = +3 / +3

                                                                
Query: 231  PLFVTWKKATNGSEPRLRGCIGTLEPRQIVSGFKDYALTSALRDRRFSPIQS 386
            PLFVTWKKATNGSEPRLRGCIGTLE RQIV+GFK+YALT  L +    P  S
Sbjct: 951  PLFVTWKKATNGSEPRLRGCIGTLEARQIVTGFKEYALTR*LLNNHCCPFIS 1106



 Score = 80.3 bits (169), Expect(4) = 2e-51
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = +3 / +3

                                                         
Query: 447  NYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPEVAAHEGWTQLEAI 581
            N +  +VGKHGLIIEFTDPDYN+RRS TYLPEVAAHEG   L +I
Sbjct: 1407 NLVVLQVGKHGLIIEFTDPDYNMRRSATYLPEVAAHEGENLLASI 1541



 Score = 73.9 bits (155), Expect(4) = 2e-51
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = +1 / +1

                                                                   
Query: 556  KDGHN*RLLTRS*GRPATMAPSLSL*GRKSASPATKVPCTPCSTVNILHMSRRTE 720
            +DGH *R LT  *GR  TM P  +L*GR S SPAT+VPCT C+ VN L  SRRTE
Sbjct: 1978 QDGHI*RPLTH**GRQVTMVP*PTL*GRNSVSPATRVPCTLCTMVNTLPTSRRTE 2142



 Score = 23.5 bits (45), Expect(4) = 2e-51
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2 / +3

                       
Query: 815  WKQLV*EFVWK 847
            W+ L *EFVWK
Sbjct: 2244 WEHLG*EFVWK 2276



 Score = 92.7 bits (196), Expect(5) = 9e-45
 Identities = 39/62 (62%), Positives = 48/62 (77%)
 Frame = +2 / +2

                                                                        
Query: 536  T*GCCP*RMDTTRGY*LAHEEGRLQWHHH*VFEEENPRHPLPKYPVHHAVR*IYCICQEE 715
            T*   P RMDT+R +*L  EEGRLQW+H+ +FEEE P HPLP+Y VH+A+ *I C+ QEE
Sbjct: 1958 T*SLIPGRMDTSRDH*LTDEEGRLQWYHNRLFEEETPCHPLPEYLVHYALW*IRCLRQEE 2137

              
Query: 716  QR 721
            QR
Sbjct: 2138 QR 2143



 Score = 58.8 bits (122), Expect(5) = 9e-45
 Identities = 25/39 (64%), Positives = 29/39 (74%)
 Frame = +1 / +1

                                                   
Query: 349  VP*GIGAFLRYSPKSCRIWNARFLY*LNTKLHSTTLIGR 465
            V *G  AFL YS K+CRIW+ ++LY* N KLH TTL GR
Sbjct: 1243 VH*GTAAFLLYSRKNCRIWSVQYLY*PNMKLHLTTLTGR 1359



 Score = 55.1 bits (114), Expect(5) = 9e-45
 Identities = 25/37 (67%), Positives = 26/37 (70%)
 Frame = +1 / +1

                                                 
Query: 232  HCLSPGRRLPMVPSHA*GDASELWSPVRL*AASRITR 342
            HCLSPGRRLPMV +HA  DA E W  VRL  ASR  R
Sbjct: 952  HCLSPGRRLPMVQNHAFEDALEPWRLVRLSLASRSMR 1062



 Score = 37.7 bits (76), Expect(5) = 9e-45
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = +1 / +1

                                            
Query: 463  RLESMV*LLSSPILTIM*DGVEHIYLRLLPMK 558
            R  SM *LL+S I TI *  V+ IYLRLLPMK
Sbjct: 1423 RWVSMG*LLNSLIQTIT*GAVQLIYLRLLPMK 1518



 Score = 23.1 bits (44), Expect(5) = 9e-45
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1 / +2

                         
Query: 814  LEAIGVRICLEKS 852
            L A GVRICLE S
Sbjct: 2243 LGAPGVRICLENS 2281



 Score = 64.3 bits (134), Expect(5) = 2e-30
 Identities = 29/44 (65%), Positives = 32/44 (72%)
 Frame = -3 / -1

                                                        
Query: 595  LMSESIASSCVHPSWAATSGKYVPLRLTL*SGSVNSIIKPCFPT 464
            +  + I +S   PSWAATSGK V LRL L*SGSVNSII PC PT
Sbjct: 1555 IQQQYIDASKFSPSWAATSGK*VALRLML*SGSVNSIINPCLPT 1424



 Score = 57.9 bits (120), Expect(5) = 2e-30
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -1 / -2

                                                  
Query: 342  ARNP*SRLQSDGAPKFRCIPLGVARNHW*PSSR*QTVG 229
            A  P*S+ QSD  P+F+CI  GV  NHW*PSSR*QT+G
Sbjct: 1062 AHTP*SQ*QSDEPPRFQCILEGVVLNHW*PSSR*QTMG 949



 Score = 48.3 bits (99), Expect(5) = 2e-30
 Identities = 23/39 (58%), Positives = 27/39 (69%)
 Frame = -1 / -2

                                                   
Query: 465  PPNQGS*VQFRIQSI*KPCIPNTAALWTVSEKSADPSGH 349
            PP+QG *VQF I+S+*    PNTA L TV E+S  PS H
Sbjct: 1359 PPSQGG*VQFHIRSV*ILYTPNTAVLSTV*EESGGPSMH 1243



 Score = 24.9 bits (48), Expect(5) = 2e-30
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -1 / -2

                              
Query: 777  R*ITGLV*IH*LWMPR*F 724
            R*  GLV* H*L +PR*F
Sbjct: 2208 R*FNGLV*SH*L*VPR*F 2155



 Score = 22.6 bits (43), Expect(5) = 2e-30
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2 / -2

                         
Query: 851  DFSKQILTPIASK 813
            +FSKQILTP A +
Sbjct: 2280 EFSKQILTPGAPR 2242



 Score = 51.9 bits (107), Expect(2) = 3e-12
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = +2 / +2

                                                    
Query: 347  QCPEGSALFSDTVQRAAVFGMHGFYID*IRNCTQLP*LGG 466
            QC EG  L S TV+R AVFG++  Y D I NCT  P*LGG
Sbjct: 1241 QCIEGPPLSSYTVERTAVFGVYSIYTDRI*NCT*PP*LGG 1360



 Score = 44.6 bits (91), Expect(2) = 3e-12
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +3 / +3

                                                   
Query: 666  TLYTMQYGEYTAYVKKNRGEINGASIVNGFKPGQ*FICL 782
            T++  +Y  Y    +    EINGA I+NGFKPG * IC+
Sbjct: 2097 TMHYGEYAAYVKKNRGAAPEINGAPIINGFKPGH*IICI 2213



 Score = 34.1 bits (68), Expect = 1.8
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1 / +1

                                                 
Query: 670  CTPCSTVNILHMSRRTEVKLTGHP*LMDSNQASDLSV 780
            CT  +T+     +     KLTGH *LM SNQA + SV
Sbjct: 2101 CTMVNTLPTSRRTEELHQKLTGHL*LMASNQAIESSV 2211



 Score = 32.2 bits (64), Expect = 6.2
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -1 / -2

                                       
Query: 630  KTQ*WCHCSRPSS*ASQ*PLVVSILHG 550
            K++ W HC+ PSS  SQ  L VSIL G
Sbjct: 2052 KSRLWYHCNLPSSSVSQWSLDVSILPG 1972



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>LOC_Os11g13620:12011.t04315:unspliced-genomic expressed protein|
          Length = 1379

 Score = 37.3 bits (75), Expect = 0.19
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -3 / +2

                             
Query: 241 TNSGWTPSSKAGGGGCSP 188
           T+SGW+ SS  GGGGC+P
Sbjct: 8   TSSGWSKSSSRGGGGCAP 61



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>LOC_Os08g01960:12008.t00095:unspliced-genomic conserved hypothetical protein|
          Length = 1602

 Score = 37.3 bits (75), Expect = 0.19
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2 / -3

                                         
Query: 857  LPLICHHAFRSKECGVPCQRPPCHLRQIK 943
            LPL  H  +RS+ CG PC+   C  R ++
Sbjct: 1507 LPLASHRCYRSQRCGFPCRSALCWFRLVR 1421



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>LOC_Os03g25600:12003.t02258:unspliced-genomic POL, putative, expressed|
          Length = 8565

 Score = 37.3 bits (75), Expect = 0.19
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3 / -3

                                                            
Query: 249  KKATNGSEPRLRGCIGTLEPRQIVSGFKDYALTSALRDRRFSPIQSKE 392
            KK  +G +PR  GC GT     ++S     + TSA RD    P+++++
Sbjct: 2335 KKVLSGPDPRGTGCNGTAAKEAVLSNAAAGSCTSAARDTHRLPVRAED 2192



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>LOC_Os11g39060:12011.t03449:unspliced-genomic hypothetical protein|
          Length = 408

 Score = 35.4 bits (71), Expect = 0.68
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3 / +2

                                                
Query: 198 PPPPAFDEGVHPLFVTWKKATNGSEPRLRGCIGTLEP 308
           PPPPA      PL   W++ T+    R RGC G   P
Sbjct: 62  PPPPASRRSQPPLRHYWRRGTSTPSWRSRGCNGRSSP 172



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>LOC_Os01g32364:12001.t02813:unspliced-genomic non-cyanogenic beta-glucosidase precursor, putative, expressed|
          Length = 8968

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2 / -3

                                       
Query: 875  HAFRSKECGVPCQRPPCHLRQIKW*WL 955
            H +R + CGV C +P C     +W WL
Sbjct: 2765 HLWRPEWCGVQCTQPVCDQSNDRWDWL 2685



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>LOC_Os10g25502:12010.t01968:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1848

 Score = 33.6 bits (67), Expect = 2.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -2 / +3

                                   
Query: 677  GVQGTLVAGDADFLPQRLSDGAI 609
            G +G LV G+A F P+R SDGA+
Sbjct: 1182 GPEGALVRGEAHFRPERPSDGAL 1250



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>LOC_Os09g03870:12009.t00283:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 20740

 Score = 33.6 bits (67), Expect = 2.4
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -2 / -2

                                                          
Query: 503   RIGELNN*TMLSNLPIKVVECSFVFSQYRNRAFQIRQLFGLYRRK 369
             +IGEL + +  S++  K++ C F+ +    R  +IR +F + RRK
Sbjct: 11010 KIGELTSSSSNSSVLRKLISCKFLVNSNLPREVRIRIIFSIKRRK 10876



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>LOC_Os06g05790:12006.t00465:unspliced-genomic transferase, putative, expressed|
          Length = 3394

 Score = 33.1 bits (66), Expect = 3.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3 / -3

                                   
Query: 516  RRSGTYLPEVAAHEGWTQLEAID 584
            R  G ++PEVAAHEGW  L  ++
Sbjct: 1028 RSVGHHVPEVAAHEGWIVLGRVE 960



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>LOC_Os02g12870:12002.t01084:unspliced-genomic expressed protein|
          Length = 4472

 Score = 33.1 bits (66), Expect = 3.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2 / -1

                                    
Query: 590 HEEGRLQWHHH*VFEEENPRHPLPK 664
           H+   LQWH +    + NP H +PK
Sbjct: 974 HQFDELQWHDNITISQHNPHHTIPK 900



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>LOC_Os12g33270:12012.t03019:unspliced-genomic hypothetical protein|
          Length = 3043

 Score = 32.7 bits (65), Expect = 4.5
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2 / -2

                               
Query: 614  HHH*VFEEENPRHPLPKYP 670
            +HH* +E + P+H +P+YP
Sbjct: 2691 YHH*TYEHQIPKHKVPQYP 2635



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>LOC_Os06g45020:12006.t04189:unspliced-genomic LRR receptor-like protein kinase, putative, expressed|
          Length = 6488

 Score = 24.9 bits (48), Expect(2) = 5.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3 / -2

                            
Query: 552 HEGWTQLEAIDSLMRKA 602
           HE WT LEA+ +L   A
Sbjct: 373 HEPWTHLEAVANLQAAA 323



 Score = 24.4 bits (47), Expect(2) = 5.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1 / -3

                            
Query: 637 RKSASPATKVPCTPCST 687
           R+S +   + PC+PCS+
Sbjct: 321 RRSTTRTNQSPCSPCSS 271



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>LOC_Os01g52000:12001.t04628:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4302

 Score = 24.9 bits (48), Expect(2) = 5.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3 / -2

                           
Query: 232  GWTPSSKAGGGGCSP 188
            G TP++ AG G CSP
Sbjct: 2456 GTTPAAVAGLGSCSP 2412



 Score = 24.4 bits (47), Expect(2) = 5.6
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2 / -2

                                         
Query: 311  TGLQSSDASP*AWLGTIGSLLPGDKQWVD 225
            TGL     S  A   +  + LPGD  W D
Sbjct: 2543 TGLAGDGTSSAATTASFPARLPGDGAWYD 2457



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>LOC_Os12g16210:12012.t01474:unspliced-genomic metal ion binding protein, putative, expressed|
          Length = 2909

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3 / +2

                                              
Query: 301 KVPMHPLRRGSEPLVAFFQVTNSGWTPSSKAGGGG 197
           +VP   L   S P + FF+VT  GW   +  G GG
Sbjct: 227 QVPPPLLSHLSSPRIGFFEVTVCGWICDAAGGHGG 331



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>LOC_Os11g43590:12011.t03889:unspliced-genomic ranGAP1 interacting protein, putative, expressed|
          Length = 5950

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2 / -3

                                 
Query: 860  PLICHHAFRSKECGVPCQRPP 922
            P ICHH   S  CG+ C  PP
Sbjct: 4757 PCICHHQLVSAVCGLGCIPPP 4695



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>LOC_Os07g39410:12007.t03602:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3030

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3 / -3

                                   
Query: 234  LFVTWKKATNGSEPRLRGCIGTL 302
            ++  W +++ G  PR R C+GT+
Sbjct: 2437 IYQVWSRSSGGPSPRTRSCVGTI 2369



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>LOC_Os02g36390:12002.t03276:unspliced-genomic nucleotide-sugar transporter/ sugar porter, putative, expressed|
          Length = 5589

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3 / +3

                                        
Query: 879  HFVPKNVGCHVNGPHVI*DKLNGDGYVS 962
            HF P  VGC +NGP++    ++   YVS
Sbjct: 5202 HFDPTKVGCALNGPYMTLKSVSS*SYVS 5285



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>LOC_Os01g16620:12001.t01511:unspliced-genomic expressed protein|
          Length = 4200

 Score = 32.2 bits (64), Expect = 6.2
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3 / +3

                                               
Query: 295 PMHPLRRGSEPLVAFFQVTNSGWTPSSKAGGGGCSP 188
           P  P R G+ P  A  +    GW  ++++ G GC P
Sbjct: 168 PSGPARAGTRPATAAAEGGRRGWCCTTRSRGRGCRP 275



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>LOC_Os09g36140:12009.t03090:unspliced-genomic RNA recognition motif 2 family protein, expressed|
          Length = 1805

 Score = 27.2 bits (53), Expect(2) = 8.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3 / +1

                           
Query: 583  SIASSCVHPSWAATS 539
            S ASSC H SW+++S
Sbjct: 1309 SAASSCAHASWSSSS 1353



 Score = 25.8 bits (50), Expect(2) = 8.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3 / +1

                        
Query: 919  GPLTWHPTFFGT 884
            GPL+W PTF G+
Sbjct: 1159 GPLSWKPTFRGS 1194



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>LOC_Os09g35960:12009.t03074:unspliced-genomic GTPase activator protein of Rab-like small GTPases-like protein,|
            putative, expressed
          Length = 4724

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3 / -1

                                                        
Query: 186  SGEQPPPPAFDEGVHPLFVTWKKATNGSEPRLRGCIGTLEPRQI 317
            S E PPPP   +    L++ ++K      P++R C G+ +P ++
Sbjct: 4475 SKETPPPPPKKKKCRGLYLFYRKNKEKRIPQIRFCRGS*QPGRV 4344



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>LOC_Os05g32030:12005.t02799:unspliced-genomic conserved hypothetical protein|
          Length = 4221

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2 / -3

                                               
Query: 680  HGVQGTLVAGDADFLPQRLSDGAIVAGLPHERVNS 576
            HG  G + AG   FLPQ L   A+  G  H+ V S
Sbjct: 4096 HGAHG*ICAGHCRFLPQPLVVWAVSLGAHHQFVKS 3992



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>LOC_Os02g49870:12002.t04571:unspliced-genomic expressed protein|
          Length = 2484

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2 / +1

                                  
Query: 749 INYGCPVNFTSVLLDICSIFTVL 681
           ++Y  PVNF SVL++ CS FT +
Sbjct: 538 LHYIAPVNFVSVLVEQCSKFTCM 606



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>LOC_Os01g34040:12001.t02969:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6035

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -2 / +2

                                  
Query: 677  GVQGTLVAGDADFLPQRLSDGA 612
            G +G LV G+A F P+R SDGA
Sbjct: 1778 GPEGALVRGEAYFRPERPSDGA 1843



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>LOC_Os05g27000:12005.t02354:unspliced-genomic expressed protein|
          Length = 2255

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1 / +1

                                
Query: 987  L*SKFIGLQIHNHHHLICLK 928
            L* K++G QIH HHH + LK
Sbjct: 1708 L*RKYVGWQIHCHHHHLFLK 1767



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>LOC_Os01g63050:12001.t05676:unspliced-genomic expressed protein|
          Length = 2550

 Score = 25.8 bits (50), Expect(3) = 9.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3 / -1

                         
Query: 295 PMHPLRRGSEPLVA 254
           P HP RRG  P VA
Sbjct: 621 PFHPRRRGGRPCVA 580



 Score = 23.5 bits (45), Expect(3) = 9.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3 / -1

                        
Query: 235 SGWTPSSKAGGGG 197
           SGWT   K  GGG
Sbjct: 105 SGWTEEGKRRGGG 67



 Score = 22.6 bits (43), Expect(3) = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1 / -3

                                      
Query: 975  FIGLQIHNHHHLICLK*HGGR*HGTP 898
            F  L I ++HH      H   *H TP
Sbjct: 2479 FKHLMISSNHHTTRANWHRAN*HSTP 2402


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 384,992,911
Number of extensions: 6350386
Number of successful extensions: 23780
Number of sequences better than 10.0: 25
Length of query: 348
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 298
Effective length of database: 52,799,986
Effective search space: 15734395828
Effective search space used: 15734395828
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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