>LOC_Os10g42250:12010.t03454:unspliced-genomic expressed protein|
Length = 2497
Score = 122 bits (262), Expect(7) = 7e-93
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +3 / +3
Query: 558 GWTQLEAIDSLMRKAGYNGTITESLRKKIRVTRYQSTLYTMQYGEYTAYVKKNRG 722
GWT LE IDSLMRKAGYNGTIT+SLRKK+RVTRYQSTLYTM YGEY AYVKKNRG
Sbjct: 1980 GWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQSTLYTMHYGEYAAYVKKNRG 2144
Score = 96.4 bits (204), Expect(7) = 7e-93
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +3 / +3
Query: 348 SALRDRRFSPIQSKELPYLECTVSILTEYETALNYLDWEVGKHGLII 488
SALRDRRF PIQSKELPYLECTVSILTEYETALN+LDWEV + L++
Sbjct: 1242 SALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVCNYTLVL 1382
Score = 79.9 bits (168), Expect(7) = 7e-93
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +3 / +2
Query: 126 MVVATEEMAVYCFDTLVAHYSGEQPPPPAFDEGV 227
MVVATEEMAVYCFD LV+HYSG+QPPPPAF+EG+
Sbjct: 128 MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGI 229
Score = 66.1 bits (138), Expect(7) = 7e-93
Identities = 25/36 (69%), Positives = 26/36 (72%)
Frame = +2 / +2
Query: 236 VCHLEEGYQWFRATPKGMHRNFGAPSDCKRLQGLRA 343
VCHLEEGYQWFR TP MH N G SDC LQG+ A
Sbjct: 956 VCHLEEGYQWFRTTPSRMHWNLGGSSDCHWLQGVCA 1063
Score = 46.4 bits (95), Expect(7) = 7e-93
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 473 AWFNY*VHRS*L*CKTEWNIFT*GCCP*R 559
AW NY*+H S L* + + N+FT*GCCP*R
Sbjct: 1433 AWVNY*IH*SRL*HEAQCNLFT*GCCP*R 1519
Score = 30.4 bits (60), Expect(7) = 7e-93
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2 / +2
Query: 725 N*RGIHS*WIQTRPVIYL 778
N*RG ++*W+QTRP+ +L
Sbjct: 2156 N*RGTYN*WLQTRPLNHL 2209
Score = 26.7 bits (52), Expect(7) = 7e-93
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 816 GSNWCENLFGKI 851
GS W ENLFGK+
Sbjct: 2245 GSTWGENLFGKL 2280
Score = 106 bits (227), Expect(7) = 3e-89
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = -3 / -1
Query: 724 SPLFFLTYAVYSPYCMVYRVLW*RVTRIFFLKDSVMVPL*PAFLMSESIASSCVHPS 554
+PLFFLT A YSP C+VY+VLW*RVTR FFLK+SVMVPL*PAFL+SES+ S CVHP+
Sbjct: 2146 APLFFLT*AAYSP*CIVYKVLW*RVTRSFFLKESVMVPL*PAFLISESMVSRCVHPA 1976
Score = 80.3 bits (169), Expect(7) = 3e-89
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -3 / -1
Query: 349 LVSA*SLKPLTI*RGSKVPMHPLRRGSEPLVAFFQVTNSG 230
LVSA SLKP+TI*R SKVPMHP RRGSEPLVAFFQVTN+G
Sbjct: 1069 LVSAYSLKPVTI*RASKVPMHPRRRGSEPLVAFFQVTNNG 950
Score = 77.1 bits (162), Expect(7) = 3e-89
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -3 / -1
Query: 466 TSQSR*LSAVSYSVNIETVHSKYGSSLDCIGEKRRSLRAL 347
TSQSR LSAVSYSV+I+TVHSKYGSS DCIG KRRSL AL
Sbjct: 1360 TSQSRWLSAVSYSVSIDTVHSKYGSSFDCIGGKRRSLNAL 1241
Score = 72.1 bits (151), Expect(7) = 3e-89
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 229 WTPSSKAGGGGCSPL*WATRVSKQ*TAISSVATTIV 122
W PSSKAGGGG SPL*W TR SKQ*TAISSVATTI+
Sbjct: 231 WMPSSKAGGGGWSPL*WETRASKQ*TAISSVATTIL 124
Score = 47.8 bits (98), Expect(7) = 3e-89
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1 / -2
Query: 558 LHGQQPQVNMFHSVLHYSQDR*TQ*LNHAFQP 463
LHGQQPQVN H YS D+* Q*L HA+ P
Sbjct: 1518 LHGQQPQVNKLHCASCYSLDQ*IQ*LTHAYPP 1423
Score = 44.1 bits (90), Expect(7) = 3e-89
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2 / -3
Query: 779 TDKSLAWFESINYGCPVNF 723
TD S+AWFE+INY CPVNF
Sbjct: 2210 TDDSMAWFEAINYRCPVNF 2154
Score = 28.1 bits (55), Expect(7) = 3e-89
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3 / -3
Query: 847 FPNKFSHQLLPSQIINNYITC 785
FPNKFS Q+LP ++ +++ C
Sbjct: 2276 FPNKFSPQVLPDKL*SHFR*C 2214
Score = 89.5 bits (189), Expect(7) = 4e-61
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = -2 / -3
Query: 722 TSVLLDICSIFTVLHGVQGTLVAGDADFLPQRLSDGAIVAGLPHERVNSL*LCPS 558
+SVLLD+ S+FT++H VQGTLVAGD +FLPQR+ G IV LPH+ VN L*+CPS
Sbjct: 2144 SSVLLDVGSVFTIVHSVQGTLVAGDTEFLPQRVGYGTIVTCLPHQ*VNGL*MCPS 1980
Score = 68.4 bits (143), Expect(7) = 4e-61
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2 / -3
Query: 485 N*TMLSNLPIKVVECSFVFSQYRNRAFQIRQLFGLYRRKAPIPQGTGQRVI 333
N +++ LP+KVV+CSF+F QYR QIRQ F LYRRKA +PQ T + I
Sbjct: 1379 NQCVVAYLPVKVVKCSFIFGQYRYCTLQIRQFFRLYRRKAAVPQCTAREYI 1227
Score = 64.8 bits (135), Expect(7) = 4e-61
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -2 / -3
Query: 344 QRVILEAAYNLTGLQSSDASP*AWLGTIGSLLPGDKQWVD 225
+R++LEA+ NLT LQ S+AS AW TIGSLLPGDKQW +
Sbjct: 1064 ERILLEASDNLTSLQGSNASSKAWF*TIGSLLPGDKQWAE 945
Score = 43.7 bits (89), Expect(7) = 4e-61
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -2 / -3
Query: 560 SFMGSNLR*ICSTPSYIIVRIGELNN*TMLSNL 462
+FMGSNLR*I T ++IV I E NN* ML++L
Sbjct: 1520 TFMGSNLR*ISCTAPHVIVWISEFNN*PMLTHL 1422
Score = 36.8 bits (74), Expect(7) = 4e-61
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 230 VDALVEGGRRRLLXXXXXXXXXXXXDRHFLRG 135
+DAL+EGGRRRL+ DRHFLRG
Sbjct: 232 LDALLEGGRRRLVAAVVGDEGVEAVDRHFLRG 137
Score = 32.2 bits (64), Expect(7) = 4e-61
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 778 QINHWPGLNPLTMDAPLIS 722
Q+ WPGL PL + APLIS
Sbjct: 2209 QMIQWPGLKPLIIGAPLIS 2153
Score = 24.9 bits (48), Expect(7) = 4e-61
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1 / -1
Query: 846 FQTNSHTNCFQAKL*III 793
FQTNSH C Q +I+
Sbjct: 2275 FQTNSHPRCSQINYKVIL 2222
Score = 93.2 bits (197), Expect(4) = 2e-51
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +3 / +3
Query: 231 PLFVTWKKATNGSEPRLRGCIGTLEPRQIVSGFKDYALTSALRDRRFSPIQS 386
PLFVTWKKATNGSEPRLRGCIGTLE RQIV+GFK+YALT L + P S
Sbjct: 951 PLFVTWKKATNGSEPRLRGCIGTLEARQIVTGFKEYALTR*LLNNHCCPFIS 1106
Score = 80.3 bits (169), Expect(4) = 2e-51
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = +3 / +3
Query: 447 NYLDWEVGKHGLIIEFTDPDYNVRRSGTYLPEVAAHEGWTQLEAI 581
N + +VGKHGLIIEFTDPDYN+RRS TYLPEVAAHEG L +I
Sbjct: 1407 NLVVLQVGKHGLIIEFTDPDYNMRRSATYLPEVAAHEGENLLASI 1541
Score = 73.9 bits (155), Expect(4) = 2e-51
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = +1 / +1
Query: 556 KDGHN*RLLTRS*GRPATMAPSLSL*GRKSASPATKVPCTPCSTVNILHMSRRTE 720
+DGH *R LT *GR TM P +L*GR S SPAT+VPCT C+ VN L SRRTE
Sbjct: 1978 QDGHI*RPLTH**GRQVTMVP*PTL*GRNSVSPATRVPCTLCTMVNTLPTSRRTE 2142
Score = 23.5 bits (45), Expect(4) = 2e-51
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 815 WKQLV*EFVWK 847
W+ L *EFVWK
Sbjct: 2244 WEHLG*EFVWK 2276
Score = 92.7 bits (196), Expect(5) = 9e-45
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2 / +2
Query: 536 T*GCCP*RMDTTRGY*LAHEEGRLQWHHH*VFEEENPRHPLPKYPVHHAVR*IYCICQEE 715
T* P RMDT+R +*L EEGRLQW+H+ +FEEE P HPLP+Y VH+A+ *I C+ QEE
Sbjct: 1958 T*SLIPGRMDTSRDH*LTDEEGRLQWYHNRLFEEETPCHPLPEYLVHYALW*IRCLRQEE 2137
Query: 716 QR 721
QR
Sbjct: 2138 QR 2143
Score = 58.8 bits (122), Expect(5) = 9e-45
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +1 / +1
Query: 349 VP*GIGAFLRYSPKSCRIWNARFLY*LNTKLHSTTLIGR 465
V *G AFL YS K+CRIW+ ++LY* N KLH TTL GR
Sbjct: 1243 VH*GTAAFLLYSRKNCRIWSVQYLY*PNMKLHLTTLTGR 1359
Score = 55.1 bits (114), Expect(5) = 9e-45
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1 / +1
Query: 232 HCLSPGRRLPMVPSHA*GDASELWSPVRL*AASRITR 342
HCLSPGRRLPMV +HA DA E W VRL ASR R
Sbjct: 952 HCLSPGRRLPMVQNHAFEDALEPWRLVRLSLASRSMR 1062
Score = 37.7 bits (76), Expect(5) = 9e-45
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +1 / +1
Query: 463 RLESMV*LLSSPILTIM*DGVEHIYLRLLPMK 558
R SM *LL+S I TI * V+ IYLRLLPMK
Sbjct: 1423 RWVSMG*LLNSLIQTIT*GAVQLIYLRLLPMK 1518
Score = 23.1 bits (44), Expect(5) = 9e-45
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +2
Query: 814 LEAIGVRICLEKS 852
L A GVRICLE S
Sbjct: 2243 LGAPGVRICLENS 2281
Score = 64.3 bits (134), Expect(5) = 2e-30
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = -3 / -1
Query: 595 LMSESIASSCVHPSWAATSGKYVPLRLTL*SGSVNSIIKPCFPT 464
+ + I +S PSWAATSGK V LRL L*SGSVNSII PC PT
Sbjct: 1555 IQQQYIDASKFSPSWAATSGK*VALRLML*SGSVNSIINPCLPT 1424
Score = 57.9 bits (120), Expect(5) = 2e-30
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 342 ARNP*SRLQSDGAPKFRCIPLGVARNHW*PSSR*QTVG 229
A P*S+ QSD P+F+CI GV NHW*PSSR*QT+G
Sbjct: 1062 AHTP*SQ*QSDEPPRFQCILEGVVLNHW*PSSR*QTMG 949
Score = 48.3 bits (99), Expect(5) = 2e-30
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = -1 / -2
Query: 465 PPNQGS*VQFRIQSI*KPCIPNTAALWTVSEKSADPSGH 349
PP+QG *VQF I+S+* PNTA L TV E+S PS H
Sbjct: 1359 PPSQGG*VQFHIRSV*ILYTPNTAVLSTV*EESGGPSMH 1243
Score = 24.9 bits (48), Expect(5) = 2e-30
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 777 R*ITGLV*IH*LWMPR*F 724
R* GLV* H*L +PR*F
Sbjct: 2208 R*FNGLV*SH*L*VPR*F 2155
Score = 22.6 bits (43), Expect(5) = 2e-30
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 851 DFSKQILTPIASK 813
+FSKQILTP A +
Sbjct: 2280 EFSKQILTPGAPR 2242
Score = 51.9 bits (107), Expect(2) = 3e-12
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2 / +2
Query: 347 QCPEGSALFSDTVQRAAVFGMHGFYID*IRNCTQLP*LGG 466
QC EG L S TV+R AVFG++ Y D I NCT P*LGG
Sbjct: 1241 QCIEGPPLSSYTVERTAVFGVYSIYTDRI*NCT*PP*LGG 1360
Score = 44.6 bits (91), Expect(2) = 3e-12
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 666 TLYTMQYGEYTAYVKKNRGEINGASIVNGFKPGQ*FICL 782
T++ +Y Y + EINGA I+NGFKPG * IC+
Sbjct: 2097 TMHYGEYAAYVKKNRGAAPEINGAPIINGFKPGH*IICI 2213
Score = 34.1 bits (68), Expect = 1.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 670 CTPCSTVNILHMSRRTEVKLTGHP*LMDSNQASDLSV 780
CT +T+ + KLTGH *LM SNQA + SV
Sbjct: 2101 CTMVNTLPTSRRTEELHQKLTGHL*LMASNQAIESSV 2211
Score = 32.2 bits (64), Expect = 6.2
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 630 KTQ*WCHCSRPSS*ASQ*PLVVSILHG 550
K++ W HC+ PSS SQ L VSIL G
Sbjct: 2052 KSRLWYHCNLPSSSVSQWSLDVSILPG 1972
>LOC_Os01g63050:12001.t05676:unspliced-genomic expressed protein|
Length = 2550
Score = 25.8 bits (50), Expect(3) = 9.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3 / -1
Query: 295 PMHPLRRGSEPLVA 254
P HP RRG P VA
Sbjct: 621 PFHPRRRGGRPCVA 580
Score = 23.5 bits (45), Expect(3) = 9.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3 / -1
Query: 235 SGWTPSSKAGGGG 197
SGWT K GGG
Sbjct: 105 SGWTEEGKRRGGG 67
Score = 22.6 bits (43), Expect(3) = 9.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1 / -3
Query: 975 FIGLQIHNHHHLICLK*HGGR*HGTP 898
F L I ++HH H *H TP
Sbjct: 2479 FKHLMISSNHHTTRANWHRAN*HSTP 2402
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 384,992,911
Number of extensions: 6350386
Number of successful extensions: 23780
Number of sequences better than 10.0: 25
Length of query: 348
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 298
Effective length of database: 52,799,986
Effective search space: 15734395828
Effective search space used: 15734395828
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)