No.
Definition
Score (bits)
E Value
1 ref|NM_001054146.1| Oryza sativa (japonica cultivar-group) Os02g...
357
1e-94
2 dbj|AK069133.1| Oryza sativa (japonica cultivar-group) cDNA clon...
357
1e-94
3 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
206
3e-49
4 dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic D...
206
3e-49
5 emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro...
198
8e-47
6 ref|NM_001056994.1| Oryza sativa (japonica cultivar-group) Os03g...
74
3e-09
7 dbj|AK120625.1| Oryza sativa (japonica cultivar-group) cDNA clon...
74
3e-09
8 dbj|AK108726.1| Oryza sativa (japonica cultivar-group) cDNA clon...
74
3e-09
9 dbj|AK070997.1| Oryza sativa (japonica cultivar-group) cDNA clon...
74
3e-09
10 dbj|AK229454.1| Arabidopsis thaliana mRNA for hypothetical prote...
54
0.003
11 ref|NM_123679.3| Arabidopsis thaliana transcription initiation f...
54
0.003
12 gb|AY457044.1| Arabidopsis thaliana TATA-binding protein associa...
54
0.003
13 emb|BX831154.1|CNS09YWI Arabidopsis thaliana Full-length cDNA Co...
54
0.003
14 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.045
15 emb|AL139382.12| Human DNA sequence from clone RP11-86N24 on chr...
50
0.045
16 emb|AL137138.13| Human DNA sequence from clone RP11-117I13 on ch...
50
0.045
17 gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genom...
50
0.045
18 ref|XM_001112524.1| PREDICTED: Macaca mulatta similar to mitogen...
48
0.18
19 gb|AC092350.4| Homo sapiens chromosome 16 clone RP11-29G3, compl...
48
0.18
20 emb|AL954650.8| Human DNA sequence from clone RP11-523M19 on chr...
48
0.18
21 emb|AL606535.11| Human DNA sequence from clone RP11-438I12 on ch...
48
0.18
22 dbj|AB051117.1| Macaca fascicularis brain cDNA, clone:QccE-19425
48
0.18
23 gb|AC191153.4| Canis Familiaris chromosome 24, clone XX-412P9, c...
46
0.70
24 gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosom...
46
0.70
25 emb|AL034396.6|HS1158B12 Human DNA sequence from clone RP5-1158B...
46
0.70
26 dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
46
0.70
27 dbj|AP004523.1| Lotus japonicus genomic DNA, chromosome 1, clone...
46
0.70
28 gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete ...
46
0.70
29 gb|AE014298.4| Drosophila melanogaster chromosome X, complete se...
44
2.8
30 emb|CT030734.24| Mouse DNA sequence from clone RP23-353G14 on ch...
44
2.8
31 gb|AC131297.11| Mus musculus chromosome 8, clone RP23-284E15, co...
44
2.8
32 gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, c...
44
2.8
33 gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome...
44
2.8
34 gb|AC135082.4| Mus musculus BAC clone RP24-222O22 from chromosom...
44
2.8
35 gb|AC124472.4| Mus musculus BAC clone RP24-83E15 from chromosome...
44
2.8
36 gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome...
44
2.8
37 gb|AC129316.4| Mus musculus BAC clone RP23-415J6 from chromosome...
44
2.8
38 gb|AC123790.4| Mus musculus BAC clone RP24-287C19 from chromosom...
44
2.8
39 gb|AC122800.3| Mus musculus BAC clone RP23-451G9 from chromosome...
44
2.8
40 gb|AC122921.2| Mus musculus BAC clone RP23-34J4 from 7, complete...
44
2.8
41 gb|AC102368.6| Mus musculus chromosome 14, clone RP23-220D8, com...
44
2.8
42 ref|NM_134552.3| Drosophila melanogaster RhoGAP19D CG1412-RA (Rh...
44
2.8
43 gb|AC163662.3| Mus musculus BAC clone RP23-299N4 from chromosome...
44
2.8
44 gb|AC011197.12| Homo sapiens chromosome 10 clone RP11-322C8, com...
44
2.8
45 emb|AL441989.13| Human DNA sequence from clone RP11-360A18 on ch...
44
2.8
46 gb|AC023095.8| Homo sapiens chromosome 8, clone RP11-26L21, comp...
44
2.8
47 gb|AY058603.1| Drosophila melanogaster LD29482 full length cDNA
44
2.8
48 gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, re...
44
2.8
49 emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chr...
44
2.8
50 emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chr...
44
2.8
51 gb|AC154228.1| Mus musculus BAC clone RP24-143I4 from chromosome...
44
2.8
52 gb|AC009503.3| Homo sapiens BAC clone RP11-516K23 from 2, comple...
44
2.8
53 gb|AC154686.2| Mus musculus BAC clone RP24-327C20 from chromosom...
44
2.8
54 emb|CR626912.1| Human DNA sequence from clone XX-NCIH2171_5A23, ...
44
2.8
55 dbj|AP004938.1| Lotus japonicus genomic DNA, chromosome 5, clone...
44
2.8
56 gb|AC132226.3| Mus musculus BAC clone RP24-571A14 from 1, comple...
44
2.8
57 gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Canc...
44
2.8
58 gb|AC140281.5| Mus musculus BAC clone RP24-329M4 from 16, comple...
44
2.8
59 gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, comple...
44
2.8
60 emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chro...
44
2.8
>ref|NM_001054146.1 | Oryza sativa (japonica cultivar-group) Os02g0654400 (Os02g0654400)
mRNA, complete cds
Length = 2908
Score = 357 bits (180), Expect = 1e-94
Identities = 390/460 (84%)
Strand = Plus / Plus
Query: 473 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 532
|||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| |
Sbjct: 425 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 484
Query: 533 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 592
|||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| |||
Sbjct: 485 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 544
Query: 593 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 652
|| |||| | |||| |||||||||| |||| ||||||||| | | || |||||||
Sbjct: 545 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 604
Query: 653 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 712
||||||| | |||||| ||||| |||||||| ||||||| || || |||||||||||||
Sbjct: 605 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 664
Query: 713 atatgttgattccaatcctacaggcgcatcttgacagagataaagacatgcagcttcaat 772
||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 665 atatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaa 724
Query: 773 ctgtatgggcaaaacttaggcgtaatgaagtccataaagatgatttcttaagagttataa 832
|||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 725 ctgtgtgggcaaaacttaggcgtaatgaagttcataaagatgatttcttgagagttatca 784
Query: 833 ggaatatcgttggagatcaaatgctcaagcaggcggcgcataaagtctttgcacagatgc 892
|||| |||||||||||||||||||| ||||| || || |||||||| |||||||||||||
Sbjct: 785 ggaacatcgttggagatcaaatgctaaagcaagcagcccataaagtttttgcacagatgc 844
Query: 893 aagctcaggcacaacgaaataaccagggaaatgcaaatca 932
|||| |||||||| ||| | ||||| ||||||||||||
Sbjct: 845 aagcccaggcacagagaagtggccaggcaaatgcaaatca 884
Score = 323 bits (163), Expect = 2e-84
Identities = 331/387 (85%)
Strand = Plus / Plus
Query: 1676 ctggagccttccaggaacaaagcatcgatcaacttaatgatgtcacagctgttagtggtg 1735
||||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 1628 ctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtg 1687
Query: 1736 ttaatcttagggaagaagaggaacaactgctctctgcccccaaggaagagagcccagcca 1795
||||||||||||||||||| ||||| || ||||||||||| |||||||||||| |||
Sbjct: 1688 ttaatcttagggaagaagaagaacagctactctctgccccaaaggaagagagctgggcct 1747
Query: 1796 cagaggccgcacggagaatcgtacaggaggaagaagaaaacctctttctgcagaagggcc 1855
|||| | ||| ||| ||| | |||||| ||||| | || || ||||||||||| ||||
Sbjct: 1748 cagaagaagcaaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcc 1807
Query: 1856 ctcttgtgaagaaactagcagaaatcgttcttaaatgtaacttgaagaacgctggcgctg 1915
| ||| ||||||||||||||| |||||||| |||||| || ||||||| | ||| | ||
Sbjct: 1808 cacttctgaagaaactagcagcaatcgttcctaaatgcaatttgaagagcattggtggtg 1867
Query: 1916 atgttgggcgttgtttatcaatgtgtgtggaggagcgactgcgaagattcataagtactc 1975
|||||| || ||||||||||||||| |||||||||||| |||||||||| || |||||||
Sbjct: 1868 atgttgagcattgtttatcaatgtgcgtggaggagcgattgcgaagatttatcagtactc 1927
Query: 1976 ttataagagtttcaaagcagagagtcgacgcagaaaagactggtcatcgactagttatta 2035
| ||||||||||||||||||||| | ||| |||||||| |||| |||| ||||||||| |
Sbjct: 1928 tcataagagtttcaaagcagagaattgacacagaaaagtctggccatcaactagttataa 1987
Query: 2036 cttcagatgtcggacgccaaattttgc 2062
| |||||||| || || ||||||||||
Sbjct: 1988 catcagatgttggccggcaaattttgc 2014
Score = 143 bits (72), Expect = 4e-30
Identities = 129/148 (87%)
Strand = Plus / Plus
Query: 2170 gaaaaagaggaaagccgtccaaagaatgcgaagcccaacaaagaagaagatgataaaatg 2229
||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| || |||
Sbjct: 2125 gaaaaggaggaaactcgttcaaagaatgcaaagcccaacaaagaagaagatgacaagatg 2184
Query: 2230 agaacaacggcagcaaatgttgctgctcggcaggcagttggaggaagtgatatgttttca 2289
|||||||| || ||||||||||| || || ||||| |||||||||||||||||| | ||
Sbjct: 2185 agaacaacagctgcaaatgttgccgcccgacaggctgttggaggaagtgatatgctgtcc 2244
Query: 2290 aagtggcagctgatggccgaacaagcta 2317
|| ||||| |||||||| ||||||||||
Sbjct: 2245 aaatggcaactgatggctgaacaagcta 2272
Score = 113 bits (57), Expect = 4e-21
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 2483 gaactgtttctgtgaaggatgtaatctgcgtcctggagagggagcatcagatgacgaaat 2542
||||| ||||| ||||||||||||| || ||||| |||||||| | ||||||||| ||||
Sbjct: 2468 gaactatttctatgaaggatgtaatatgtgtcctcgagagggaacctcagatgacaaaat 2527
Query: 2543 cgcggctgatttatcggctgtacgagcgattgcctggagagcccaccacagattagg 2599
|||||||||| |||||||| || ||||| ||||||||||| |||||| ||||||||
Sbjct: 2528 cgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattagg 2584
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1198 aacaaacagctgcaacccacagaaatccagcaagcctcacagcaattatatggaac 1253
|||||||||| |||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 1162 aacaaacagcagcaacccacacaagtccagcaagcctcacagcaaatatatggaac 1217
Score = 48.1 bits (24), Expect = 0.18
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 2386 gcttcaaagaggagccatcttgcggcctttggaactggaggcacggaaaggcaaggcaag 2445
||||| ||||||| |||| ||| || |||||||||||||||| | | |||||||||| |
Sbjct: 2371 gcttcgaagaggacccattctgcagcgtttggaactggaggcatgaacaggcaaggcagg 2430
Query: 2446 ggttcatt 2453
||| ||||
Sbjct: 2431 ggtccatt 2438
>dbj|AK069133.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023007I15, full
insert sequence
Length = 2909
Score = 357 bits (180), Expect = 1e-94
Identities = 390/460 (84%)
Strand = Plus / Plus
Query: 473 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 532
|||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| |
Sbjct: 426 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 485
Query: 533 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 592
|||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| |||
Sbjct: 486 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 545
Query: 593 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 652
|| |||| | |||| |||||||||| |||| ||||||||| | | || |||||||
Sbjct: 546 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 605
Query: 653 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 712
||||||| | |||||| ||||| |||||||| ||||||| || || |||||||||||||
Sbjct: 606 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 665
Query: 713 atatgttgattccaatcctacaggcgcatcttgacagagataaagacatgcagcttcaat 772
||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 666 atatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaa 725
Query: 773 ctgtatgggcaaaacttaggcgtaatgaagtccataaagatgatttcttaagagttataa 832
|||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct: 726 ctgtgtgggcaaaacttaggcgtaatgaagttcataaagatgatttcttgagagttatca 785
Query: 833 ggaatatcgttggagatcaaatgctcaagcaggcggcgcataaagtctttgcacagatgc 892
|||| |||||||||||||||||||| ||||| || || |||||||| |||||||||||||
Sbjct: 786 ggaacatcgttggagatcaaatgctaaagcaagcagcccataaagtttttgcacagatgc 845
Query: 893 aagctcaggcacaacgaaataaccagggaaatgcaaatca 932
|||| |||||||| ||| | ||||| ||||||||||||
Sbjct: 846 aagcccaggcacagagaagtggccaggcaaatgcaaatca 885
Score = 323 bits (163), Expect = 2e-84
Identities = 331/387 (85%)
Strand = Plus / Plus
Query: 1676 ctggagccttccaggaacaaagcatcgatcaacttaatgatgtcacagctgttagtggtg 1735
||||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 1629 ctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtg 1688
Query: 1736 ttaatcttagggaagaagaggaacaactgctctctgcccccaaggaagagagcccagcca 1795
||||||||||||||||||| ||||| || ||||||||||| |||||||||||| |||
Sbjct: 1689 ttaatcttagggaagaagaagaacagctactctctgccccaaaggaagagagctgggcct 1748
Query: 1796 cagaggccgcacggagaatcgtacaggaggaagaagaaaacctctttctgcagaagggcc 1855
|||| | ||| ||| ||| | |||||| ||||| | || || ||||||||||| ||||
Sbjct: 1749 cagaagaagcaaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcc 1808
Query: 1856 ctcttgtgaagaaactagcagaaatcgttcttaaatgtaacttgaagaacgctggcgctg 1915
| ||| ||||||||||||||| |||||||| |||||| || ||||||| | ||| | ||
Sbjct: 1809 cacttctgaagaaactagcagcaatcgttcctaaatgcaatttgaagagcattggtggtg 1868
Query: 1916 atgttgggcgttgtttatcaatgtgtgtggaggagcgactgcgaagattcataagtactc 1975
|||||| || ||||||||||||||| |||||||||||| |||||||||| || |||||||
Sbjct: 1869 atgttgagcattgtttatcaatgtgcgtggaggagcgattgcgaagatttatcagtactc 1928
Query: 1976 ttataagagtttcaaagcagagagtcgacgcagaaaagactggtcatcgactagttatta 2035
| ||||||||||||||||||||| | ||| |||||||| |||| |||| ||||||||| |
Sbjct: 1929 tcataagagtttcaaagcagagaattgacacagaaaagtctggccatcaactagttataa 1988
Query: 2036 cttcagatgtcggacgccaaattttgc 2062
| |||||||| || || ||||||||||
Sbjct: 1989 catcagatgttggccggcaaattttgc 2015
Score = 143 bits (72), Expect = 4e-30
Identities = 129/148 (87%)
Strand = Plus / Plus
Query: 2170 gaaaaagaggaaagccgtccaaagaatgcgaagcccaacaaagaagaagatgataaaatg 2229
||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| || |||
Sbjct: 2126 gaaaaggaggaaactcgttcaaagaatgcaaagcccaacaaagaagaagatgacaagatg 2185
Query: 2230 agaacaacggcagcaaatgttgctgctcggcaggcagttggaggaagtgatatgttttca 2289
|||||||| || ||||||||||| || || ||||| |||||||||||||||||| | ||
Sbjct: 2186 agaacaacagctgcaaatgttgccgcccgacaggctgttggaggaagtgatatgctgtcc 2245
Query: 2290 aagtggcagctgatggccgaacaagcta 2317
|| ||||| |||||||| ||||||||||
Sbjct: 2246 aaatggcaactgatggctgaacaagcta 2273
Score = 113 bits (57), Expect = 4e-21
Identities = 102/117 (87%)
Strand = Plus / Plus
Query: 2483 gaactgtttctgtgaaggatgtaatctgcgtcctggagagggagcatcagatgacgaaat 2542
||||| ||||| ||||||||||||| || ||||| |||||||| | ||||||||| ||||
Sbjct: 2469 gaactatttctatgaaggatgtaatatgtgtcctcgagagggaacctcagatgacaaaat 2528
Query: 2543 cgcggctgatttatcggctgtacgagcgattgcctggagagcccaccacagattagg 2599
|||||||||| |||||||| || ||||| ||||||||||| |||||| ||||||||
Sbjct: 2529 cgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattagg 2585
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1198 aacaaacagctgcaacccacagaaatccagcaagcctcacagcaattatatggaac 1253
|||||||||| |||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 1163 aacaaacagcagcaacccacacaagtccagcaagcctcacagcaaatatatggaac 1218
Score = 48.1 bits (24), Expect = 0.18
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 2386 gcttcaaagaggagccatcttgcggcctttggaactggaggcacggaaaggcaaggcaag 2445
||||| ||||||| |||| ||| || |||||||||||||||| | | |||||||||| |
Sbjct: 2372 gcttcgaagaggacccattctgcagcgtttggaactggaggcatgaacaggcaaggcagg 2431
Query: 2446 ggttcatt 2453
||| ||||
Sbjct: 2432 ggtccatt 2439
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
Length = 35954743
Score = 206 bits (104), Expect = 3e-49
Identities = 266/320 (83%)
Strand = Plus / Minus
Query: 473 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 532
|||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| |
Sbjct: 26420293 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 26420234
Query: 533 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 592
|||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| |||
Sbjct: 26420233 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 26420174
Query: 593 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 652
|| |||| | |||| |||||||||| |||| ||||||||| | | || |||||||
Sbjct: 26420173 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 26420114
Query: 653 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 712
||||||| | |||||| ||||| |||||||| ||||||| || || |||||||||||||
Sbjct: 26420113 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 26420054
Query: 713 atatgttgattccaatcctacaggcgcatcttgacagagataaagacatgcagcttcaat 772
||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 26420053 atatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaa 26419994
Query: 773 ctgtatgggcaaaacttagg 792
|||| |||||||||||||||
Sbjct: 26419993 ctgtgtgggcaaaacttagg 26419974
Score = 121 bits (61), Expect = 1e-23
Identities = 103/117 (88%)
Strand = Plus / Minus
Query: 2201 agcccaacaaagaagaagatgataaaatgagaacaacggcagcaaatgttgctgctcggc 2260
|||||||||||||||||||||| || ||||||||||| || ||||||||||| || || |
Sbjct: 26415842 agcccaacaaagaagaagatgacaagatgagaacaacagctgcaaatgttgccgcccgac 26415783
Query: 2261 aggcagttggaggaagtgatatgttttcaaagtggcagctgatggccgaacaagcta 2317
|||| |||||||||||||||||| | || || ||||| |||||||| ||||||||||
Sbjct: 26415782 aggctgttggaggaagtgatatgctgtccaaatggcaactgatggctgaacaagcta 26415726
Score = 121 bits (61), Expect = 1e-23
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 792 gcgtaatgaagtccataaagatgatttcttaagagttataaggaatatcgttggagatca 851
|||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 26419433 gcgtaatgaagttcataaagatgatttcttgagagttatcaggaacatcgttggagatca 26419374
Query: 852 aatgctcaagcaggcggcgcataaagtctttgcacag 888
|||||| ||||| || || |||||||| |||||||||
Sbjct: 26419373 aatgctaaagcaagcagcccataaagtttttgcacag 26419337
Score = 113 bits (57), Expect = 4e-21
Identities = 102/117 (87%)
Strand = Plus / Minus
Query: 2483 gaactgtttctgtgaaggatgtaatctgcgtcctggagagggagcatcagatgacgaaat 2542
||||| ||||| ||||||||||||| || ||||| |||||||| | ||||||||| ||||
Sbjct: 26415434 gaactatttctatgaaggatgtaatatgtgtcctcgagagggaacctcagatgacaaaat 26415375
Query: 2543 cgcggctgatttatcggctgtacgagcgattgcctggagagcccaccacagattagg 2599
|||||||||| |||||||| || ||||| ||||||||||| |||||| ||||||||
Sbjct: 26415374 cgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattagg 26415318
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 1676 ctggagccttccaggaacaaagcatcgatcaacttaatgatgtcacagctgttagtggtg 1735
||||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 26417260 ctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtg 26417201
Query: 1736 ttaatcttaggg 1747
||||||||||||
Sbjct: 26417200 ttaatcttaggg 26417189
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 1198 aacaaacagctgcaacccacagaaatccagcaagcctcacagcaattatatggaac 1253
|||||||||| |||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 26418859 aacaaacagcagcaacccacacaagtccagcaagcctcacagcaaatatatggaac 26418804
Score = 75.8 bits (38), Expect = 8e-10
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 1942 gtggaggagcgactgcgaagattcataagtactcttataagagtttcaaagcag 1995
|||||||||||| |||||||||| || |||||||| ||||||||||||||||||
Sbjct: 26416736 gtggaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcag 26416683
Score = 73.8 bits (37), Expect = 3e-09
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 1746 ggaagaagaggaacaactgctctctgcccccaaggaagagagcccagccacagaggccgc 1805
||||||||| ||||| || ||||||||||| |||||||||||| ||| |||| | ||
Sbjct: 26417102 ggaagaagaagaacagctactctctgccccaaaggaagagagctgggcctcagaagaagc 26417043
Query: 1806 acggagaatcgtacaggaggaagaagaaaacctctttctgcagaagggccctcttgtgaa 1865
| ||| ||| | |||||| ||||| | || || ||||||||||| ||||| ||| ||||
Sbjct: 26417042 aaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcccacttctgaa 26416983
Query: 1866 gaaactagcagaaatcg 1882
||||||||||| |||||
Sbjct: 26416982 gaaactagcagcaatcg 26416966
>dbj|AP004676.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1003_B06
Length = 131956
Score = 206 bits (104), Expect = 3e-49
Identities = 266/320 (83%)
Strand = Plus / Minus
Query: 473 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 532
|||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| |
Sbjct: 20209 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 20150
Query: 533 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 592
|||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| |||
Sbjct: 20149 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 20090
Query: 593 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 652
|| |||| | |||| |||||||||| |||| ||||||||| | | || |||||||
Sbjct: 20089 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 20030
Query: 653 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 712
||||||| | |||||| ||||| |||||||| ||||||| || || |||||||||||||
Sbjct: 20029 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 19970
Query: 713 atatgttgattccaatcctacaggcgcatcttgacagagataaagacatgcagcttcaat 772
||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 19969 atatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaa 19910
Query: 773 ctgtatgggcaaaacttagg 792
|||| |||||||||||||||
Sbjct: 19909 ctgtgtgggcaaaacttagg 19890
Score = 121 bits (61), Expect = 1e-23
Identities = 103/117 (88%)
Strand = Plus / Minus
Query: 2201 agcccaacaaagaagaagatgataaaatgagaacaacggcagcaaatgttgctgctcggc 2260
|||||||||||||||||||||| || ||||||||||| || ||||||||||| || || |
Sbjct: 15758 agcccaacaaagaagaagatgacaagatgagaacaacagctgcaaatgttgccgcccgac 15699
Query: 2261 aggcagttggaggaagtgatatgttttcaaagtggcagctgatggccgaacaagcta 2317
|||| |||||||||||||||||| | || || ||||| |||||||| ||||||||||
Sbjct: 15698 aggctgttggaggaagtgatatgctgtccaaatggcaactgatggctgaacaagcta 15642
Score = 121 bits (61), Expect = 1e-23
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 792 gcgtaatgaagtccataaagatgatttcttaagagttataaggaatatcgttggagatca 851
|||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 19349 gcgtaatgaagttcataaagatgatttcttgagagttatcaggaacatcgttggagatca 19290
Query: 852 aatgctcaagcaggcggcgcataaagtctttgcacag 888
|||||| ||||| || || |||||||| |||||||||
Sbjct: 19289 aatgctaaagcaagcagcccataaagtttttgcacag 19253
Score = 113 bits (57), Expect = 4e-21
Identities = 102/117 (87%)
Strand = Plus / Minus
Query: 2483 gaactgtttctgtgaaggatgtaatctgcgtcctggagagggagcatcagatgacgaaat 2542
||||| ||||| ||||||||||||| || ||||| |||||||| | ||||||||| ||||
Sbjct: 15350 gaactatttctatgaaggatgtaatatgtgtcctcgagagggaacctcagatgacaaaat 15291
Query: 2543 cgcggctgatttatcggctgtacgagcgattgcctggagagcccaccacagattagg 2599
|||||||||| |||||||| || ||||| ||||||||||| |||||| ||||||||
Sbjct: 15290 cgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattagg 15234
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 1676 ctggagccttccaggaacaaagcatcgatcaacttaatgatgtcacagctgttagtggtg 1735
||||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 17176 ctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtg 17117
Query: 1736 ttaatcttaggg 1747
||||||||||||
Sbjct: 17116 ttaatcttaggg 17105
Score = 79.8 bits (40), Expect = 5e-11
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 1198 aacaaacagctgcaacccacagaaatccagcaagcctcacagcaattatatggaac 1253
|||||||||| |||||||||| || |||||||||||||||||||| ||||||||||
Sbjct: 18775 aacaaacagcagcaacccacacaagtccagcaagcctcacagcaaatatatggaac 18720
Score = 75.8 bits (38), Expect = 8e-10
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 1942 gtggaggagcgactgcgaagattcataagtactcttataagagtttcaaagcag 1995
|||||||||||| |||||||||| || |||||||| ||||||||||||||||||
Sbjct: 16652 gtggaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcag 16599
Score = 73.8 bits (37), Expect = 3e-09
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 1746 ggaagaagaggaacaactgctctctgcccccaaggaagagagcccagccacagaggccgc 1805
||||||||| ||||| || ||||||||||| |||||||||||| ||| |||| | ||
Sbjct: 17018 ggaagaagaagaacagctactctctgccccaaaggaagagagctgggcctcagaagaagc 16959
Query: 1806 acggagaatcgtacaggaggaagaagaaaacctctttctgcagaagggccctcttgtgaa 1865
| ||| ||| | |||||| ||||| | || || ||||||||||| ||||| ||| ||||
Sbjct: 16958 aaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcccacttctgaa 16899
Query: 1866 gaaactagcagaaatcg 1882
||||||||||| |||||
Sbjct: 16898 gaaactagcagcaatcg 16882
>emb|AJ307662.1 |OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
Length = 339972
Score = 198 bits (100), Expect = 8e-47
Identities = 265/320 (82%)
Strand = Plus / Minus
Query: 473 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 532
|||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| |
Sbjct: 142344 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 142285
Query: 533 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 592
|||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| |||
Sbjct: 142284 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 142225
Query: 593 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 652
|| |||| | |||| |||||||||| |||| ||||||||| | | || |||||||
Sbjct: 142224 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 142165
Query: 653 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 712
||||||| | |||||| || || |||||||| ||||||| || || |||||||||||||
Sbjct: 142164 aagcaccacctggtgcacaagacgcaaggaagcggggataccaaccgtctataccattta 142105
Query: 713 atatgttgattccaatcctacaggcgcatcttgacagagataaagacatgcagcttcaat 772
||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct: 142104 atatgttgattccaatcctacaggctcatcttgacagagacaaggatatgcagcttcaaa 142045
Query: 773 ctgtatgggcaaaacttagg 792
|||| |||||||||||||||
Sbjct: 142044 ctgtgtgggcaaaacttagg 142025
Score = 121 bits (61), Expect = 1e-23
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 792 gcgtaatgaagtccataaagatgatttcttaagagttataaggaatatcgttggagatca 851
|||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 141481 gcgtaatgaagttcataaagatgatttcttgagagttatcaggaacatcgttggagatca 141422
Query: 852 aatgctcaagcaggcggcgcataaagtctttgcacag 888
|||||| ||||| || || |||||||| |||||||||
Sbjct: 141421 aatgctaaagcaagcagcccataaagtttttgcacag 141385
Score = 105 bits (53), Expect = 9e-19
Identities = 101/117 (86%)
Strand = Plus / Minus
Query: 2483 gaactgtttctgtgaaggatgtaatctgcgtcctggagagggagcatcagatgacgaaat 2542
||||| ||||| ||||||||||||| || || || |||||||| | ||||||||| ||||
Sbjct: 137467 gaactatttctatgaaggatgtaatatgtgtactcgagagggaacctcagatgacaaaat 137408
Query: 2543 cgcggctgatttatcggctgtacgagcgattgcctggagagcccaccacagattagg 2599
|||||||||| |||||||| || ||||| ||||||||||| |||||| ||||||||
Sbjct: 137407 cgcggctgatatatcggctctatgagcggttgcctggagattccaccagagattagg 137351
Score = 105 bits (53), Expect = 9e-19
Identities = 101/117 (86%)
Strand = Plus / Minus
Query: 2201 agcccaacaaagaagaagatgataaaatgagaacaacggcagcaaatgttgctgctcggc 2260
|||||||||||||||||||||| || ||||||||||| || |||||||| || || || |
Sbjct: 137875 agcccaacaaagaagaagatgacaagatgagaacaacagctgcaaatgtagccgcccgac 137816
Query: 2261 aggcagttggaggaagtgatatgttttcaaagtggcagctgatggccgaacaagcta 2317
|||| |||||||||||||||||| | || || ||||| || ||||| ||||||||||
Sbjct: 137815 aggctgttggaggaagtgatatgctgtccaaatggcaacttatggctgaacaagcta 137759
Score = 103 bits (52), Expect = 3e-18
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 1676 ctggagccttccaggaacaaagcatcgatcaacttaatgatgtcacagctgttagtggtg 1735
||||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||
Sbjct: 139308 ctggaaccttccaagaacaaagcttcgatcaactaaatgatgtcacggctgttagtggtg 139249
Query: 1736 ttaatcttaggg 1747
||||||||||||
Sbjct: 139248 ttaatcttaggg 139237
Score = 75.8 bits (38), Expect = 8e-10
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 1942 gtggaggagcgactgcgaagattcataagtactcttataagagtttcaaagcag 1995
|||||||||||| |||||||||| || |||||||| ||||||||||||||||||
Sbjct: 138784 gtggaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcag 138731
Score = 73.8 bits (37), Expect = 3e-09
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 1746 ggaagaagaggaacaactgctctctgcccccaaggaagagagcccagccacagaggccgc 1805
||||||||| ||||| || ||||||||||| |||||||||||| ||| |||| | ||
Sbjct: 139150 ggaagaagaagaacagctactctctgccccaaaggaagagagctgggcctcagaagaagc 139091
Query: 1806 acggagaatcgtacaggaggaagaagaaaacctctttctgcagaagggccctcttgtgaa 1865
| ||| ||| | |||||| ||||| | || || ||||||||||| ||||| ||| ||||
Sbjct: 139090 aaggaaaattgcacaggaagaagatggcaagctttttctgcagaaaggcccacttctgaa 139031
Query: 1866 gaaactagcagaaatcg 1882
||||||||||| |||||
Sbjct: 139030 gaaactagcagcaatcg 139014
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 2006 cagaaaagactggtcatcgactagttattacttcagatgtcggacgccaaattttgc 2062
|||||||| |||| |||||||||||||| || |||||||| || || ||||||||||
Sbjct: 138641 cagaaaagtctggccatcgactagttataacatcagatgttggccggcaaattttgc 138585
>emb|AL732571.8 | Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete
sequence
Length = 214061
Score = 44.1 bits (22), Expect = 2.8
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 912 taaccagggaaatgcaaatcaa 933
||||||||||||||||||||||
Sbjct: 59602 taaccagggaaatgcaaatcaa 59581
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 527,934,278
Number of extensions: 29604549
Number of successful extensions: 243289
Number of sequences better than 10.0: 60
Number of HSP's gapped: 243279
Number of HSP's successfully gapped: 101
Length of query: 2840
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2817
Effective length of database: 18,503,978,556
Effective search space: 52125707592252
Effective search space used: 52125707592252
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)