ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf141b16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0596600:Os01g0596600 | 31 | 0.56 | 2 | Os12g0542200:Os12g0542200 | 31 | 0.57 | 3 | AK120625:Os03g0441000 | 30 | 1.3 | 4 | AK070997:Os03g0441000 | 30 | 1.3 | 5 | Os01g0264100:Os01g0264100 | 29 | 1.6 | 6 | Os04g0419500:Os04g0419500 | 29 | 1.6 | 7 | AK066809:Os09g0246200 | 29 | 2.1 | 8 | AB120431:Os09g0246200 | 29 | 2.1 | 9 | AB096014:Os09g0246200 | 29 | 2.1 | 10 | AK102467:Os01g0747400 | 29 | 2.2 | 11 | AK110512: | 28 | 2.8 | 12 | AK067585:Os03g0812200 | 28 | 2.8 | 13 | AK060419:Os03g0812200 | 28 | 2.8 | 14 | AK073760:Os02g0606800 | 28 | 4.7 | 15 | AK105999:Os11g0531300 | 28 | 4.8 | 16 | AK105736:Os11g0531300 | 28 | 4.8 | 17 | AK073149:Os08g0151700 | 28 | 4.8 | 18 | AK110228: | 27 | 6.2 | 19 | AK069076:Os05g0515700 | 27 | 8.1 | 20 | Os12g0298700:Os12g0298700 | 27 | 8.2 | 21 | AK066448:Os06g0252300 | 27 | 8.2 |
|---|
>Os01g0596600:Os01g0596600 | Length = 783 Score = 30.8 bits (68), Expect = 0.56 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 371 EHGFAGAHGCFERWEVRDGQTLGHELPASIQVGREG 264 E GFAG G RW ++ ++ H A +GREG Sbjct: 90 EDGFAGPQGQLLRWLAKERDSVAHHGGAGEDLGREG 125
>Os12g0542200:Os12g0542200 | Length = 760 Score = 30.8 bits (68), Expect = 0.57 Identities = 31/124 (25%), Positives = 38/124 (30%) Frame = +1 Query: 79 SSLSTTPCTLLAPCTSSDLDLHPSVCLATLSTWPFVRFTCEKARSY*MTDSEHAQALARC 258 S + +TP T L ++S + PS C + +T TC Sbjct: 538 SKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPSTTCTS------------------ 579 Query: 259 HLPSLPTWIDAGSSCPSVCPSLTSHRSKQPCAPAKPCSGFTESFPRTCLVG*RDIPDRCQ 438 L T SS PS P TS P S T P T G P Sbjct: 580 ---PLSTATGKTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTARTGELSTPTDKI 636 Query: 439 PTRT 450 PT T Sbjct: 637 PTTT 640
>AK120625:Os03g0441000 | Length = 843 Score = 29.6 bits (65), Expect = 1.3 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 333 VGGERWADTRARASSIDPSGEGRKMAPRQRLSMFTIGH 220 V G A T A ASS P G + P++ SMFT H Sbjct: 57 VEGSGGASTSAAASSSQPLDHGAGLVPQESNSMFTHNH 94
>AK070997:Os03g0441000 | Length = 574 Score = 29.6 bits (65), Expect = 1.3 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 333 VGGERWADTRARASSIDPSGEGRKMAPRQRLSMFTIGH 220 V G A T A ASS P G + P++ SMFT H Sbjct: 47 VEGSGGASTSAAASSSQPLDHGAGLVPQESNSMFTHNH 84
>Os01g0264100:Os01g0264100 | Length = 753 Score = 29.3 bits (64), Expect = 1.6 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = -3 Query: 370 STASPARMAASSGGR*EMGRHSGTSFQHRSKWGGKEDGTAP 248 ST+ P+ + GR GR + R +WGGKE P Sbjct: 24 STSGPSGAGGGAAGRSGGGRSGAGKERRRPEWGGKERARHP 64
>Os04g0419500:Os04g0419500 | Length = 431 Score = 29.3 bits (64), Expect = 1.6 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 15/62 (24%) Frame = +1 Query: 226 DSEHAQALARC----HLPSLPTWIDAGSSCPSVCPSL-----------TSHRSKQPCAPA 360 D EH + L +C H+ + W+ A S+CP+ SL S S+ APA Sbjct: 246 DGEHVRVLPKCNHGFHVRCIDRWLLARSTCPTCRQSLFGAPQKASGCSESEGSQAEPAPA 305 Query: 361 KP 366 +P Sbjct: 306 RP 307
>AK066809:Os09g0246200 | Length = 951 Score = 28.9 bits (63), Expect = 2.1 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 11/72 (15%) Frame = -3 Query: 394 GEMTQ*SPSTASPARMAASSGGR*EMGR--HSGTSFQ--------HRSKWG-GKEDGTAP 248 GE+ + PS ++PA A G R GR HS + HR + G GK A Sbjct: 108 GEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKHSAEAM 167 Query: 247 ALEHVHYRSFNM 212 A+ V Y + M Sbjct: 168 AVHGVGYHKYAM 179
>AB120431:Os09g0246200 | Length = 1017 Score = 28.9 bits (63), Expect = 2.1 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 11/72 (15%) Frame = -3 Query: 394 GEMTQ*SPSTASPARMAASSGGR*EMGR--HSGTSFQ--------HRSKWG-GKEDGTAP 248 GE+ + PS ++PA A G R GR HS + HR + G GK A Sbjct: 108 GEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKHSAEAM 167 Query: 247 ALEHVHYRSFNM 212 A+ V Y + M Sbjct: 168 AVHGVGYHKYAM 179
>AB096014:Os09g0246200 | Length = 1017 Score = 28.9 bits (63), Expect = 2.1 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 11/72 (15%) Frame = -3 Query: 394 GEMTQ*SPSTASPARMAASSGGR*EMGR--HSGTSFQ--------HRSKWG-GKEDGTAP 248 GE+ + PS ++PA A G R GR HS + HR + G GK A Sbjct: 108 GEIARGDPSVSAPAPAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKHSAEAM 167 Query: 247 ALEHVHYRSFNM 212 A+ V Y + M Sbjct: 168 AVHGVGYHKYAM 179
>AK102467:Os01g0747400 | Length = 637 Score = 28.9 bits (63), Expect = 2.2 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -1 Query: 315 ADTRARASSIDPSGEGRKMAPRQR 244 AD AR+SS+ +GEG K P+QR Sbjct: 218 ADAAARSSSLKVAGEGPKPKPKQR 241
>AK110512: | Length = 881 Score = 28.5 bits (62), Expect = 2.8 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Frame = +1 Query: 145 PSVCLATLSTWPFVRFTCEKARSY*MTDSEHAQALARC--HLPSLPTWIDAGSSCPSVCP 318 PS+ + + S WP + + MT S RC + S + S+ PS+ Sbjct: 141 PSIVIPSPSAWPTIEKLKSATSAVPMTPSNLLTPSRRCLAMIDSHNLQVPLHSAAPSLDG 200 Query: 319 SLTSHRSKQPCAPAKP 366 SLTS + PA P Sbjct: 201 SLTSEEMDRLSCPATP 216
>AK067585:Os03g0812200 | Length = 369 Score = 28.5 bits (62), Expect = 2.8 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +1 Query: 223 TDSEHAQALARCHLPSLPTWIDAGSSCPSVCPSLTSHRSKQPCAPA 360 T+++ + H + W++ SSCP L + SK PC A Sbjct: 266 TEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESKNPCESA 311
>AK060419:Os03g0812200 | Length = 369 Score = 28.5 bits (62), Expect = 2.8 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +1 Query: 223 TDSEHAQALARCHLPSLPTWIDAGSSCPSVCPSLTSHRSKQPCAPA 360 T+++ + H + W++ SSCP L + SK PC A Sbjct: 266 TEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESKNPCESA 311
>AK073760:Os02g0606800 | Length = 252 Score = 27.7 bits (60), Expect = 4.7 Identities = 12/36 (33%), Positives = 23/36 (63%) Frame = -2 Query: 173 VDSVARQTLGCRSKSLEVQGARSVQGVVDSDENVMH 66 ++ V + GC + +L V+ ARS+QG + +++MH Sbjct: 197 LEDVVIYSEGCATYNLPVEVARSMQGTLAHPQDLMH 232
>AK105999:Os11g0531300 | Length = 445 Score = 27.7 bits (60), Expect = 4.8 Identities = 13/44 (29%), Positives = 17/44 (38%) Frame = +1 Query: 280 WIDAGSSCPSVCPSLTSHRSKQPCAPAKPCSGFTESFPRTCLVG 411 W CP+ P+ SH P + PCS + P L G Sbjct: 128 WCGEADICPNPQPAYMSHPKPNPHVFSSPCSPVVFNSPSNHLAG 171
>AK105736:Os11g0531300 | Length = 445 Score = 27.7 bits (60), Expect = 4.8 Identities = 13/44 (29%), Positives = 17/44 (38%) Frame = +1 Query: 280 WIDAGSSCPSVCPSLTSHRSKQPCAPAKPCSGFTESFPRTCLVG 411 W CP+ P+ SH P + PCS + P L G Sbjct: 128 WCGEADICPNPQPAYMSHPKPNPHVFSSPCSPVVFNSPSNHLAG 171
>AK073149:Os08g0151700 | Length = 586 Score = 27.7 bits (60), Expect = 4.8 Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 4/70 (5%) Frame = +1 Query: 169 STWPFVRFTCEKARSY*MTDSEHAQALARC----HLPSLPTWIDAGSSCPSVCPSLTSHR 336 + WP E R +H L C H L W++ CP LT Sbjct: 5 AAWPVCTICYEDLRPL---SDQHLHCLPACGHVFHALCLEQWLEY---CPGGKKKLTCPI 58 Query: 337 SKQPCAPAKP 366 KQPC A P Sbjct: 59 CKQPCGAAHP 68
>AK110228: | Length = 1551 Score = 27.3 bits (59), Expect = 6.2 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 478 GHHAPSARAACELAGSGQECPFTQQGRFGEMTQ*SPSTASPARMAASSGG 329 G S AA GS P FG + +P+ +PA AASSGG Sbjct: 1216 GAPTSSLPAASPFGGSSSALPSASP--FGAASSAAPAFGAPASAAASSGG 1263 Score = 26.9 bits (58), Expect = 8.1 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 Query: 469 APSARAACELAGSGQECPFTQQGRFGEMTQ*SPSTASPARMAASSGG 329 APSA + S PF FG +PS ++PA+ AA SGG Sbjct: 1112 APSAATPAAASTSSAAAPFA----FGAAA--TPSFSTPAKPAAESGG 1152
>AK069076:Os05g0515700 | Length = 641 Score = 26.9 bits (58), Expect = 8.1 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = +2 Query: 188 ASLVRKHVHIE*PIVNMLKRWRGAIFLPSPLGSMLEARAR 307 A+L+ + VH +ML+ WR + +PSP S+ ++++ Sbjct: 61 AALLEEQVH------HMLREWRAELNVPSPASSLQNSQSQ 94
>Os12g0298700:Os12g0298700 | Length = 308 Score = 26.9 bits (58), Expect = 8.2 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Frame = +1 Query: 283 IDAGSSCPSVCPSLTSHR----SKQPCAPAKPCSGFTES 387 + GS+ P++ T H+ +K+PC P+ P F +S Sbjct: 268 VGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFRDS 306
>AK066448:Os06g0252300 | Length = 847 Score = 26.9 bits (58), Expect = 8.2 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 3/38 (7%) Frame = +1 Query: 295 SSCPSVCPSLT---SHRSKQPCAPAKPCSGFTESFPRT 399 +SC VC + H PC P+ PC FP T Sbjct: 411 ASCGQVCGAPRRECKHTCTAPCHPSSPCPDLRCEFPMT 448 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,495,726 Number of extensions: 434685 Number of successful extensions: 1481 Number of sequences better than 10.0: 21 Number of HSP's gapped: 1480 Number of HSP's successfully gapped: 22 Length of query: 176 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 82 Effective length of database: 11,636,001 Effective search space: 954152082 Effective search space used: 954152082 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
