ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf143n03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0666600:Os01g0666600 244 5e-65
2AK110109: 32 0.67
3Os10g0447200:Os10g0447200 30 1.5
4Os04g0419500:Os04g0419500 30 2.0
5Os03g0709500:Os03g0709500 30 2.5
6AK120895:Os12g0585200 29 3.3
7AK101403:Os09g0520700 29 3.3
8AK110227: 29 4.3
9AK100900:Os04g0208600 29 4.3
10AK100443:Os04g0555600 29 4.3
11AK099483:Os04g0467800 29 4.4
12AK071423:Os06g0142700 28 5.7
13AK110017: 28 7.4
14Os05g0387700:Os05g0387700 28 9.7
15AK100967:Os04g0221600 28 9.7
16AK073782:Os03g0831300 28 9.7
17AK073107:Os01g0814200 28 9.7
18AK070675:Os01g0814200 28 9.7
19AK119431:Os02g0149600 28 9.7

>Os01g0666600:Os01g0666600 |
          Length = 187
 Score =  244 bits (623), Expect = 5e-65
 Identities = 140/190 (73%), Positives = 159/190 (83%), Gaps = 6/190 (3%)
 Frame = +3

Query: 51  MACSFSPSSATRLQAVDAAAVKNARVPLKAS-VSAAPRSLGS-CRAARQEFEGATRQDPS 224
           MACSF PSSATRLQAVDAAAV+++RVP +A+ VS   RSLG+ C+AA    +    QDP+
Sbjct: 1   MACSFPPSSATRLQAVDAAAVRSSRVPPRAATVSPVQRSLGAGCKAAAAARQEGATQDPA 60

Query: 225 VSVSSARTQLDLLEQLTSSSTSD----ENDTATETRVRTTIREQLVALYGDRGGEFTFTL 392
           +SVSSARTQLDLLEQLT+  TSD    EN   TE RV+TTIREQL A+ GDR GE+T  L
Sbjct: 61  ISVSSARTQLDLLEQLTTP-TSDGIGVENGAPTEPRVQTTIREQLSAVIGDRDGEYT--L 117

Query: 393 PLGKRLREGLKTLNALTVSQRRNIKRQAMLTKVSGRNDSVFFATVGAFVLVPPIAILAIA 572
           PLGK+L+EGLK LN+LTVSQRRNIKRQA+LTKVSGRNDSVFFATVGAFVLVPP+AILAIA
Sbjct: 118 PLGKKLKEGLKKLNSLTVSQRRNIKRQALLTKVSGRNDSVFFATVGAFVLVPPLAILAIA 177

Query: 573 VLTGYVQLLP 602
           VLTGYVQLLP
Sbjct: 178 VLTGYVQLLP 187



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>AK110109: |
          Length = 858

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 25/90 (27%), Positives = 36/90 (40%)
 Frame = +3

Query: 42  RGFMACSFSPSSATRLQAVDAAAVKNARVPLKASVSAAPRSLGSCRAARQEFEGATRQDP 221
           RG    S  PSS +        A  NA V    +  A+P S G   A+     G      
Sbjct: 52  RGQAVSSAQPSSTSTSDLPTPVASNNAHVVSSPAQMASPVSTGGLDASSGIVSGPVDAIT 111

Query: 222 SVSVSSARTQLDLLEQLTSSSTSDENDTAT 311
             S S+A+ + + L +L  S  +D +  AT
Sbjct: 112 GPSASAAKIRSENLRKLGLSERADHSGVAT 141



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>Os10g0447200:Os10g0447200 |
          Length = 225

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
 Frame = -1

Query: 345 AAHGW*CG----HGFP*RCHSHQMWRRTSVAPGDPTGCVPKKLRRLDPAVSRPRIPDGRP 178
           AA GW  G     G P     HQ  RR +  P     C P   R   P  + PR  +GRP
Sbjct: 144 AADGWIQGGTVPEGGPHAAPHHQPRRRAARYPRLADSCAPTPCRGSPPLAAAPRGRNGRP 203



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>Os04g0419500:Os04g0419500 |
          Length = 431

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
 Frame = -1

Query: 363 HRRALPAAHGW*CGHGFP*RCHSHQMWRRTSV---------APGDPTGCVPKKLRRLDPA 211
           H R LP      C HGF  RC    +  R++          AP   +GC   +  + +PA
Sbjct: 249 HVRVLPK-----CNHGFHVRCIDRWLLARSTCPTCRQSLFGAPQKASGCSESEGSQAEPA 303

Query: 210 VSRPRIPDGRP 178
            +RP +   RP
Sbjct: 304 PARPVLAPLRP 314



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>Os03g0709500:Os03g0709500 |
          Length = 410

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 183 ARQEFEGATRQDPSVSVSSARTQLDLLEQLTSSSTSDENDTA 308
           ARQE +G  R  PS  +SSA     L + +   S+S+   TA
Sbjct: 279 ARQEAQGEQRSSPSADLSSADPSSSLSDDIIVVSSSERATTA 320



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>AK120895:Os12g0585200 |
          Length = 202

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
 Frame = -2

Query: 491 DLGEHGLPL-----DVPPLRDGEGVEGLEAFPEPLAQREGECEFASPVTV----ERYQLL 339
           D G+H  PL     DVPP R  +G EG+        +R GE  F   V V    + Y  L
Sbjct: 125 DDGDHASPLARGDGDVPPARCDDGDEGIRR----RIERRGEDRFGVHVDVGPDPDEYPRL 180

Query: 338 TDGSADTG 315
            D S   G
Sbjct: 181 ADRSVHGG 188



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>AK101403:Os09g0520700 |
          Length = 696

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 27/94 (28%), Positives = 45/94 (47%)
 Frame = +3

Query: 69  PSSATRLQAVDAAAVKNARVPLKASVSAAPRSLGSCRAARQEFEGATRQDPSVSVSSART 248
           P +A    AVD +A K ++  LKA   A      S R   ++ +    ++PS S SS+  
Sbjct: 5   PVAAAEPMAVDESASKKSKRKLKA---AEVEVEASSRKKEKKEKKRKAKEPSPSSSSSSE 61

Query: 249 QLDLLEQLTSSSTSDENDTATETRVRTTIREQLV 350
                E+  SS++SDE   A +   +   +E++V
Sbjct: 62  -----EEERSSTSSDEPAPAAKKAKKEKTKEKVV 90



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>AK110227: |
          Length = 884

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
 Frame = +3

Query: 33   RNLRGFMACSFSPSSATRLQAVDAA---------AVKNARVPLKASVSAAPRSLGSCRAA 185
            R +R  +A  F+ S+AT +   D A         A   AR PL+ S+     +     AA
Sbjct: 736  RIMRSAVAAQFTSSAATAMDEDDEADEDADDSAQATPLARTPLRRSLDMTMLANSGDVAA 795

Query: 186  RQEFEGATRQDPSVSVSSARTQLDLLEQLTSSSTSDENDTATE 314
            R +   +     S   +S+  ++  L+ +   +  DE D  TE
Sbjct: 796  RGQELASFAASISSDSASSVLEVPSLDPIPDEADVDEEDELTE 838



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>AK100900:Os04g0208600 |
          Length = 524

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 512 HRVVPPADLGEHGLPLDVPPLRDGEGVEGLEAFPEPLAQR 393
           H  +P A +  H     +PP  D +GV+ L   P+ L +R
Sbjct: 40  HFAIPDAPVSSHARLSALPPDDDDDGVDRLSLLPDALLRR 79



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>AK100443:Os04g0555600 |
          Length = 1285

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 117  NARVPLKASVS-AAPRSLGSCRAARQEFEGATRQDPSVSVSSARTQLDLLEQLTSSS 284
            ++ VP  + VS AA RS   CR+  +  +  T +  S+S  +    LD+L  +  S+
Sbjct: 1149 DSAVPSASMVSSAASRSNSLCRSGNEPMDAGTSRRSSLSTDAGGLPLDVLTSMADSN 1205



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>AK099483:Os04g0467800 |
          Length = 430

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
 Frame = +1

Query: 184 PVRNSRARHGRIQASQFLRHAPSWISWS--------N*RPPPHLMRMTPL-RKPVSALPS 336
           P ++S   HG    S+FL H   WI ++        +  PPP  +   PL R+ +  LP 
Sbjct: 140 PYQHSMKYHGSKHDSEFLTHLRMWIVYNPPGDLDNESVSPPPLHLEGAPLPREVLCTLPC 199

Query: 337 VSS 345
           V S
Sbjct: 200 VGS 202



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>AK071423:Os06g0142700 |
          Length = 154

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
 Frame = +2

Query: 131 PQGVGLGRAEIAGQLQGR-------PSGIRGRDTAGSKRLSFFGTHPVGSPG 265
           P   GL R EIA +LQG+       P G  G   A +   S++    VG PG
Sbjct: 51  PIATGLEREEIAAELQGKKRFDMDAPVGPFGTKEAPAVIQSYYNKRIVGCPG 102



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>AK110017: |
          Length = 982

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 19/91 (20%), Positives = 36/91 (39%)
 Frame = +3

Query: 60  SFSPSSATRLQAVDAAAVKNARVPLKASVSAAPRSLGSCRAARQEFEGATRQDPSVSVSS 239
           S +P   T   +  A     +  P   + S+ P    S  + R      + +  + S +S
Sbjct: 442 STTPKPTTSSTSSRATTTTTSSTPKTTTSSSTPVPTTSSTSTRSSTSSTSTRSSTSSTTS 501

Query: 240 ARTQLDLLEQLTSSSTSDENDTATETRVRTT 332
             T+       T +STS  + T++ +  +TT
Sbjct: 502 TSTRSSTSSTSTRTSTSTTSTTSSTSSSKTT 532



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>Os05g0387700:Os05g0387700 |
          Length = 492

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 22/77 (28%), Positives = 30/77 (38%)
 Frame = -2

Query: 494 ADLGEHGLPLDVPPLRDGEGVEGLEAFPEPLAQREGECEFASPVTVERYQLLTDGSADTG 315
           A LG+ GL L VP    G+      A P P     G   +  P  V    L T       
Sbjct: 217 ARLGDFGLALRVPKRLPGDAAANAAATPAP----AGTLGYLDPAYVTPESLSTKTDV--- 269

Query: 314 FRSGVILIRCGGGRQLL 264
           F  G++L+    GR+ +
Sbjct: 270 FSFGILLLEIMSGRKAI 286



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>AK100967:Os04g0221600 |
          Length = 1077

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 668 GRAKAFMCMEKSKDSH*RLIDSWQELDITXXXXXX*NGDRRHEDKSAD 525
           GR +A +  +++KD      D+W++ D T       + +RRH D S +
Sbjct: 808 GRDQALVLKKRNKD------DAWRDNDETKKTGKVSSVERRHRDSSTE 849



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>AK073782:Os03g0831300 |
          Length = 312

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 27/97 (27%), Positives = 41/97 (42%)
 Frame = +3

Query: 24  QEPRNLRGFMACSFSPSSATRLQAVDAAAVKNARVPLKASVSAAPRSLGSCRAARQEFEG 203
           Q+ + LR   + S SPS + R     AAA     V   A+V A   + G  R    +   
Sbjct: 29  QQQQRLRSPTSPSLSPSPSPRSGRHKAAAAAPPAVVAAAAVGAGVLTDGDSRVDSDD-SS 87

Query: 204 ATRQDPSVSVSSARTQLDLLEQLTSSSTSDENDTATE 314
           +T   PSV+ ++  T          ++ +D N TA E
Sbjct: 88  STSSKPSVASTATAT----------TTAADVNVTAVE 114



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>AK073107:Os01g0814200 |
          Length = 277

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 589 T*PVRTAIAKMAIGGTRTKAPTVAKNTESFLP 494
           T PVR  +A   +GG   KAPT   N + FLP
Sbjct: 23  TEPVRIFVATWNVGG---KAPTAELNLDDFLP 51



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>AK070675:Os01g0814200 |
          Length = 151

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 589 T*PVRTAIAKMAIGGTRTKAPTVAKNTESFLP 494
           T PVR  +A   +GG   KAPT   N + FLP
Sbjct: 74  TEPVRIFVATWNVGG---KAPTAELNLDDFLP 102



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>AK119431:Os02g0149600 |
          Length = 666

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 288 MWRRTSVAPGDPTGCVPKKLRRLDPAVSRPR 196
           +WRR S +P  P   +P K  RLD   S PR
Sbjct: 127 IWRRLSPSPPPPLPPLPPKRPRLDGRRSPPR 157


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,282,329
Number of extensions: 559124
Number of successful extensions: 1668
Number of sequences better than 10.0: 19
Number of HSP's gapped: 1664
Number of HSP's successfully gapped: 19
Length of query: 268
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 169
Effective length of database: 11,435,796
Effective search space: 1932649524
Effective search space used: 1932649524
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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