ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf140o07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 161 bits (81), Expect = 1e-35 Identities = 203/243 (83%), Gaps = 3/243 (1%) Strand = Plus / Minus Query: 1120 gccgctggactacagcacagtgatcttgtcggactggagtcgtctcggcttcgacgaggt 1179 ||||||||||||| | || |||| ||||||||||||| || | || ||| ||||||| Sbjct: 24391641 gccgctggactacgggacggtgacggtgtcggactggagccgcgtggggttcaacgaggt 24391582 Query: 1180 ggactacggcttcggcgcgccagggtacgtgttcccgctcaacaaccacgtcaacttcgt 1239 ||||||||| ||||||| ||| |||||||||||| |||||||| || |||||||| |||| Sbjct: 24391581 ggactacgggttcggcgagcccgggtacgtgttcacgctcaacgacgacgtcaacatcgt 24391522 Query: 1240 cgcggcgctcaactatgtcaggccgccggcgcccaggcgtgggggcatccgggtggtgct 1299 |||| || | | ||| || ||||||||||||||| || | |||||||| | |||| Sbjct: 24391521 cgcgtcggtgatctacctccggccgccggcgcccaagc---gcggcatccgcctcatgct 24391465 Query: 1300 ccgctgtgtcgaggagcctcatgccgccgcgttcgccgtcgagctcgccaagttcgccta 1359 |||||| ||||||||||| || |||||||| ||||||| ||||||||||||||||||||| Sbjct: 24391464 ccgctgcgtcgaggagccgcacgccgccgccttcgccgacgagctcgccaagttcgccta 24391405 Query: 1360 gat 1362 ||| Sbjct: 24391404 gat 24391402 Score = 129 bits (65), Expect = 3e-26 Identities = 131/153 (85%) Strand = Plus / Minus Query: 511 gttcacctgcggtgggttcgccgtcgggatccgtttcagccacgcggtgttcgacgggca 570 |||||||||||| || ||||| || |||||| | ||||||||| ||||||||||||||| Sbjct: 24392253 gttcacctgcggcggattcgcggtggggatctgcttcagccacctggtgttcgacgggca 24392194 Query: 571 tggggctgcgcagttccttacggcggcgggggagctagcgcgggggctcaaggcgccgtc 630 || || |||||||| || | ||||||||| ||| | |||||||||||| ||||||||| Sbjct: 24392193 gggcgcggcgcagtttctcaaggcggcgggcgagatggcgcgggggctcccggcgccgtc 24392134 Query: 631 agtggctccggtgtgggaccgcgacgcgatccc 663 ||| | |||||||||||||||||||||||||| Sbjct: 24392133 ggtgcccccggtgtgggaccgcgacgcgatccc 24392101 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Minus Query: 78 ccgttaccaagtcgccgccggcgctcatcccgccggcggggcctaccccctgcggcaccc 137 |||| |||||||||||||||||||| | || ||||||||||| ||||| ||||| ||| Sbjct: 24396676 ccgtcaccaagtcgccgccggcgctggtgcccccggcggggcccaccccgggcggctccc 24396617 Query: 138 tcccgctctcctccattgacaagaccgtcgccg 170 |||||||||||||||| |||||||||| ||||| Sbjct: 24396616 tcccgctctcctccatcgacaagaccgccgccg 24396584 Score = 95.6 bits (48), Expect = 5e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 866 gcgtcggcgctccctgacgacgccgaggtacggatggccttcgccgccagcacgcggcac 925 |||||| ||||||| |||||||||||||| || | | ||||||||||||||||||||| Sbjct: 24391901 gcgtcgtcgctccccgacgacgccgaggtccgcctcgggttcgccgccagcacgcggcac 24391842 Query: 926 cttctccgcggcgtgctgccgacggtggagggctactacggcaactgcgtgt 977 || ||| |||||| || ||| ||||||| || ||||||||||||||||||| Sbjct: 24391841 ctgctcgccggcgttctcccggcggtggacgggtactacggcaactgcgtgt 24391790 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 263 atgcgcaacgggttcgcgagggcgcttgtaccgtactatccggtggccggccg 315 |||||| ||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 24392630 atgcgcgacgggttcgcgagggcgctcgtgccgtactacccggtggccggccg 24392578 Score = 65.9 bits (33), Expect = 4e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 338 gtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgcc 397 |||||||||||||| ||||| | |||||||||||||| | ||||||||| |||||||| Sbjct: 24392546 gtggactgcaccggcgagggggtgtggttcgtggaggccacggcgagctgcacgctcgcc 24392487 Query: 398 gacgt 402 ||||| Sbjct: 24392486 gacgt 24392482 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Minus Query: 337 cgtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgc 396 |||||| |||||||| |||||| ||||||||||||||| ||||| ||||| |||| Sbjct: 10563011 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgccggctgcagcctcga 10562952 Query: 397 cgacgtcgacggcctcgac 415 |||||| ||||||||||| Sbjct: 10562951 cgacgtgaacggcctcgac 10562933 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 4531409 ctcgggttcgccgaggtggactacggcttcggcccgcc 4531446 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1146 tgtcggactggagtcgtctcggcttcgacgaggtggactacgg 1188 |||||||||||| || || ||||||| ||||||||||||||| Sbjct: 4109898 tgtcggactggacccggctgggcttcgccgaggtggactacgg 4109856 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 518 tgcggtgggttcgccgtcgggatccgtttcagccacgcggtg 559 ||||| || |||| ||||||| |||| ||||||||||||||| Sbjct: 4110541 tgcggcggcttcgtcgtcgggttccggttcagccacgcggtg 4110500 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1023 cgctggcggaggtcgtcggcgcggtacgggaggccaaggagg 1064 ||||||||||||| || |||| ||| |||||||| ||||||| Sbjct: 24391744 cgctggcggaggtggtgggcgtggtgcgggaggcgaaggagg 24391703 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 855 cgctggcgctggcgtcggcgct 876 |||||||||||||||||||||| Sbjct: 40092013 cgctggcgctggcgtcggcgct 40091992
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 161 bits (81), Expect = 1e-35 Identities = 203/243 (83%), Gaps = 3/243 (1%) Strand = Plus / Minus Query: 1120 gccgctggactacagcacagtgatcttgtcggactggagtcgtctcggcttcgacgaggt 1179 ||||||||||||| | || |||| ||||||||||||| || | || ||| ||||||| Sbjct: 137545 gccgctggactacgggacggtgacggtgtcggactggagccgcgtggggttcaacgaggt 137486 Query: 1180 ggactacggcttcggcgcgccagggtacgtgttcccgctcaacaaccacgtcaacttcgt 1239 ||||||||| ||||||| ||| |||||||||||| |||||||| || |||||||| |||| Sbjct: 137485 ggactacgggttcggcgagcccgggtacgtgttcacgctcaacgacgacgtcaacatcgt 137426 Query: 1240 cgcggcgctcaactatgtcaggccgccggcgcccaggcgtgggggcatccgggtggtgct 1299 |||| || | | ||| || ||||||||||||||| || | |||||||| | |||| Sbjct: 137425 cgcgtcggtgatctacctccggccgccggcgcccaagc---gcggcatccgcctcatgct 137369 Query: 1300 ccgctgtgtcgaggagcctcatgccgccgcgttcgccgtcgagctcgccaagttcgccta 1359 |||||| ||||||||||| || |||||||| ||||||| ||||||||||||||||||||| Sbjct: 137368 ccgctgcgtcgaggagccgcacgccgccgccttcgccgacgagctcgccaagttcgccta 137309 Query: 1360 gat 1362 ||| Sbjct: 137308 gat 137306 Score = 129 bits (65), Expect = 3e-26 Identities = 131/153 (85%) Strand = Plus / Minus Query: 511 gttcacctgcggtgggttcgccgtcgggatccgtttcagccacgcggtgttcgacgggca 570 |||||||||||| || ||||| || |||||| | ||||||||| ||||||||||||||| Sbjct: 138157 gttcacctgcggcggattcgcggtggggatctgcttcagccacctggtgttcgacgggca 138098 Query: 571 tggggctgcgcagttccttacggcggcgggggagctagcgcgggggctcaaggcgccgtc 630 || || |||||||| || | ||||||||| ||| | |||||||||||| ||||||||| Sbjct: 138097 gggcgcggcgcagtttctcaaggcggcgggcgagatggcgcgggggctcccggcgccgtc 138038 Query: 631 agtggctccggtgtgggaccgcgacgcgatccc 663 ||| | |||||||||||||||||||||||||| Sbjct: 138037 ggtgcccccggtgtgggaccgcgacgcgatccc 138005 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Minus Query: 78 ccgttaccaagtcgccgccggcgctcatcccgccggcggggcctaccccctgcggcaccc 137 |||| |||||||||||||||||||| | || ||||||||||| ||||| ||||| ||| Sbjct: 142580 ccgtcaccaagtcgccgccggcgctggtgcccccggcggggcccaccccgggcggctccc 142521 Query: 138 tcccgctctcctccattgacaagaccgtcgccg 170 |||||||||||||||| |||||||||| ||||| Sbjct: 142520 tcccgctctcctccatcgacaagaccgccgccg 142488 Score = 95.6 bits (48), Expect = 5e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 866 gcgtcggcgctccctgacgacgccgaggtacggatggccttcgccgccagcacgcggcac 925 |||||| ||||||| |||||||||||||| || | | ||||||||||||||||||||| Sbjct: 137805 gcgtcgtcgctccccgacgacgccgaggtccgcctcgggttcgccgccagcacgcggcac 137746 Query: 926 cttctccgcggcgtgctgccgacggtggagggctactacggcaactgcgtgt 977 || ||| |||||| || ||| ||||||| || ||||||||||||||||||| Sbjct: 137745 ctgctcgccggcgttctcccggcggtggacgggtactacggcaactgcgtgt 137694 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 263 atgcgcaacgggttcgcgagggcgcttgtaccgtactatccggtggccggccg 315 |||||| ||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 138534 atgcgcgacgggttcgcgagggcgctcgtgccgtactacccggtggccggccg 138482 Score = 65.9 bits (33), Expect = 4e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 338 gtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgcc 397 |||||||||||||| ||||| | |||||||||||||| | ||||||||| |||||||| Sbjct: 138450 gtggactgcaccggcgagggggtgtggttcgtggaggccacggcgagctgcacgctcgcc 138391 Query: 398 gacgt 402 ||||| Sbjct: 138390 gacgt 138386 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1023 cgctggcggaggtcgtcggcgcggtacgggaggccaaggagg 1064 ||||||||||||| || |||| ||| |||||||| ||||||| Sbjct: 137648 cgctggcggaggtggtgggcgtggtgcgggaggcgaaggagg 137607
>ref|NM_001050107.1| Oryza sativa (japonica cultivar-group) Os01g0615200 (Os01g0615200) mRNA, complete cds Length = 1341 Score = 157 bits (79), Expect = 1e-34 Identities = 201/241 (83%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 1120 gccgctggactacagcacagtgatcttgtcggactggagtcgtctcggcttcgacgaggt 1179 ||||||||||||| | || |||| ||||||||||||| || | || ||| ||||||| Sbjct: 1104 gccgctggactacgggacggtgacggtgtcggactggagccgcgtggggttcaacgaggt 1163 Query: 1180 ggactacggcttcggcgcgccagggtacgtgttcccgctcaacaaccacgtcaacttcgt 1239 ||||||||| ||||||| ||| |||||||||||| |||||||| || |||||||| |||| Sbjct: 1164 ggactacgggttcggcgagcccgggtacgtgttcacgctcaacgacgacgtcaacatcgt 1223 Query: 1240 cgcggcgctcaactatgtcaggccgccggcgcccaggcgtgggggcatccgggtggtgct 1299 |||| || | | ||| || ||||||||||||||| || | |||||||| | |||| Sbjct: 1224 cgcgtcggtgatctacctccggccgccggcgcccaagc---gcggcatccgcctcatgct 1280 Query: 1300 ccgctgtgtcgaggagcctcatgccgccgcgttcgccgtcgagctcgccaagttcgccta 1359 |||||| ||||||||||| || |||||||| ||||||| ||||||||||||||||||||| Sbjct: 1281 ccgctgcgtcgaggagccgcacgccgccgccttcgccgacgagctcgccaagttcgccta 1340 Query: 1360 g 1360 | Sbjct: 1341 g 1341 Score = 139 bits (70), Expect = 4e-29 Identities = 163/194 (84%) Strand = Plus / Plus Query: 470 gagaagctcaaccaccacatcctcatggtccaggcgacgaggttcacctgcggtgggttc 529 ||||||||| | ||| ||||||||||| |||| ||| | |||||||||||| || ||| Sbjct: 451 gagaagctcgaggacctcatcctcatggctcaggtgaccaagttcacctgcggcggattc 510 Query: 530 gccgtcgggatccgtttcagccacgcggtgttcgacgggcatggggctgcgcagttcctt 589 || || |||||| | ||||||||| ||||||||||||||| || || |||||||| || Sbjct: 511 gcggtggggatctgcttcagccacctggtgttcgacgggcagggcgcggcgcagtttctc 570 Query: 590 acggcggcgggggagctagcgcgggggctcaaggcgccgtcagtggctccggtgtgggac 649 | ||||||||| ||| | |||||||||||| ||||||||| ||| | |||||||||||| Sbjct: 571 aaggcggcgggcgagatggcgcgggggctcccggcgccgtcggtgcccccggtgtgggac 630 Query: 650 cgcgacgcgatccc 663 |||||||||||||| Sbjct: 631 cgcgacgcgatccc 644 Score = 95.6 bits (48), Expect = 5e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 866 gcgtcggcgctccctgacgacgccgaggtacggatggccttcgccgccagcacgcggcac 925 |||||| ||||||| |||||||||||||| || | | ||||||||||||||||||||| Sbjct: 844 gcgtcgtcgctccccgacgacgccgaggtccgcctcgggttcgccgccagcacgcggcac 903 Query: 926 cttctccgcggcgtgctgccgacggtggagggctactacggcaactgcgtgt 977 || ||| |||||| || ||| ||||||| || ||||||||||||||||||| Sbjct: 904 ctgctcgccggcgttctcccggcggtggacgggtactacggcaactgcgtgt 955 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 263 atgcgcaacgggttcgcgagggcgcttgtaccgtactatccggtggccggccg 315 |||||| ||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 238 atgcgcgacgggttcgcgagggcgctcgtgccgtactacccggtggccggccg 290 Score = 65.9 bits (33), Expect = 4e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 338 gtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgcc 397 |||||||||||||| ||||| | |||||||||||||| | ||||||||| |||||||| Sbjct: 322 gtggactgcaccggcgagggggtgtggttcgtggaggccacggcgagctgcacgctcgcc 381 Query: 398 gacgt 402 ||||| Sbjct: 382 gacgt 386 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1023 cgctggcggaggtcgtcggcgcggtacgggaggccaaggagg 1064 ||||||||||||| || |||| ||| |||||||| ||||||| Sbjct: 1001 cgctggcggaggtggtgggcgtggtgcgggaggcgaaggagg 1042
>ref|NM_001050108.1| Oryza sativa (japonica cultivar-group) Os01g0615300 (Os01g0615300) mRNA, complete cds Length = 1561 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Plus Query: 78 ccgttaccaagtcgccgccggcgctcatcccgccggcggggcctaccccctgcggcaccc 137 |||| |||||||||||||||||||| | || ||||||||||| ||||| ||||| ||| Sbjct: 88 ccgtcaccaagtcgccgccggcgctggtgcccccggcggggcccaccccgggcggctccc 147 Query: 138 tcccgctctcctccattgacaagaccgtcgccg 170 |||||||||||||||| |||||||||| ||||| Sbjct: 148 tcccgctctcctccatcgacaagaccgccgccg 180
>dbj|AK061211.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D05, full insert sequence Length = 1556 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Plus Query: 78 ccgttaccaagtcgccgccggcgctcatcccgccggcggggcctaccccctgcggcaccc 137 |||| |||||||||||||||||||| | || ||||||||||| ||||| ||||| ||| Sbjct: 55 ccgtcaccaagtcgccgccggcgctggtgcccccggcggggcccaccccgggcggctccc 114 Query: 138 tcccgctctcctccattgacaagaccgtcgccg 170 |||||||||||||||| |||||||||| ||||| Sbjct: 115 tcccgctctcctccatcgacaagaccgccgccg 147
>dbj|AK069226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014K19, full insert sequence Length = 1562 Score = 87.7 bits (44), Expect = 1e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 83 accaagtcgccgccggcgctcatcccgccggcggggcctaccccctgcggcaccctcccg 142 |||||||||||||||| ||| | || ||||||||||| ||||| ||||| |||||||| Sbjct: 94 accaagtcgccgccggtgctggtgcccccggcggggcccaccccgggcggctccctcccg 153 Query: 143 ctctcctccattgacaagaccgtcgccg 170 ||||||||||| |||||||||| ||||| Sbjct: 154 ctctcctccatcgacaagaccgccgccg 181
>ref|NM_001049326.1| Oryza sativa (japonica cultivar-group) Os01g0291500 (Os01g0291500) mRNA, complete cds Length = 1647 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Plus Query: 337 cgtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgc 396 |||||| |||||||| |||||| ||||||||||||||| ||||| ||||| |||| Sbjct: 391 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgccggctgcagcctcga 450 Query: 397 cgacgtcgacggcctcgac 415 |||||| ||||||||||| Sbjct: 451 cgacgtgaacggcctcgac 469
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 116 gggcctaccccctgcggcaccctcccgctctcctccattgacaagaccgtcgccg 170 ||||||||||| ||||| |||| || || ||||||||||||||||||| ||||| Sbjct: 23869320 gggcctaccccgggcggctcccttccactatcctccattgacaagaccgccgccg 23869266
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Minus Query: 337 cgtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgc 396 |||||| |||||||| |||||| ||||||||||||||| ||||| ||||| |||| Sbjct: 57634 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgccggctgcagcctcga 57575 Query: 397 cgacgtcgacggcctcgac 415 |||||| ||||||||||| Sbjct: 57574 cgacgtgaacggcctcgac 57556
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 116 gggcctaccccctgcggcaccctcccgctctcctccattgacaagaccgtcgccg 170 ||||||||||| ||||| |||| || || ||||||||||||||||||| ||||| Sbjct: 24247 gggcctaccccgggcggctcccttccactatcctccattgacaagaccgccgccg 24193
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Minus Query: 116 gggcctaccccctgcggcaccctcccgctctcctccattgacaagaccgtcgccg 170 ||||||||||| ||||| |||| || || ||||||||||||||||||| ||||| Sbjct: 57820 gggcctaccccgggcggctcccttccactatcctccattgacaagaccgccgccg 57766
>dbj|AK070443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D03, full insert sequence Length = 1655 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Plus Query: 337 cgtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgc 396 |||||| |||||||| |||||| ||||||||||||||| ||||| ||||| |||| Sbjct: 392 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgccggctgcagcctcga 451 Query: 397 cgacgtcgacggcctcgac 415 |||||| ||||||||||| Sbjct: 452 cgacgtgaacggcctcgac 470
>dbj|AK060689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A09, full insert sequence Length = 1553 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Plus Query: 337 cgtggactgcaccggagagggcatctggttcgtggaggcagccgcgagctgcgcgctcgc 396 |||||| |||||||| |||||| ||||||||||||||| ||||| ||||| |||| Sbjct: 287 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgccggctgcagcctcga 346 Query: 397 cgacgtcgacggcctcgac 415 |||||| ||||||||||| Sbjct: 347 cgacgtgaacggcctcgac 365
>ref|NM_001048774.1| Oryza sativa (japonica cultivar-group) Os01g0185300 (Os01g0185300) mRNA, complete cds Length = 1591 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 1138 ctcgggttcgccgaggtggactacggcttcggcccgcc 1175
>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 66096 ctcgggttcgccgaggtggactacggcttcggcccgcc 66133
>dbj|AK110554.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C05, full insert sequence Length = 1033 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 246 ctcgggttcgccgaggtggactacggcttcggcccgcc 209
>dbj|AK104360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C03, full insert sequence Length = 1097 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 647 ctcgggttcgccgaggtggactacggcttcggcccgcc 684
>dbj|AK098922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O23, full insert sequence Length = 1581 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 1136 ctcgggttcgccgaggtggactacggcttcggcccgcc 1173
>dbj|AK065320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P13, full insert sequence Length = 2131 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 1678 ctcgggttcgccgaggtggactacggcttcggcccgcc 1715
>dbj|AK065131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P14, full insert sequence Length = 1593 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 1140 ctcgggttcgccgaggtggactacggcttcggcccgcc 1177
>dbj|AK061343.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E05, full insert sequence Length = 1097 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||| |||| |||||||||||||||||||||| |||| Sbjct: 647 ctcgggttcgccgaggtggactacggcttcggcccgcc 684
>ref|NM_001058695.1| Oryza sativa (japonica cultivar-group) Os04g0175500 (Os04g0175500) mRNA, complete cds Length = 1296 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Plus Query: 952 ggagggctactacggcaactgcgt 975 |||||||||||||||||||||||| Sbjct: 879 ggagggctactacggcaactgcgt 902
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Minus Query: 952 ggagggctactacggcaactgcgt 975 |||||||||||||||||||||||| Sbjct: 5117090 ggagggctactacggcaactgcgt 5117067
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 48.1 bits (24), Expect = 0.099 Identities = 24/24 (100%) Strand = Plus / Minus Query: 952 ggagggctactacggcaactgcgt 975 |||||||||||||||||||||||| Sbjct: 93363 ggagggctactacggcaactgcgt 93340
>gb|CP000478.1| Syntrophobacter fumaroxidans MPOB, complete genome Length = 4990251 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1326 ccgcgttcgccgtcgagctcgcc 1348 ||||||||||||||||||||||| Sbjct: 2340971 ccgcgttcgccgtcgagctcgcc 2340993
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 388 cgcgctcgccgacgtcgacggcc 410 ||||||||||||||||||||||| Sbjct: 79602 cgcgctcgccgacgtcgacggcc 79580
>ref|NM_001061617.1| Oryza sativa (japonica cultivar-group) Os05g0278500 (Os05g0278500) mRNA, complete cds Length = 1551 Score = 46.1 bits (23), Expect = 0.39 Identities = 35/39 (89%) Strand = Plus / Plus Query: 344 tgcaccggagagggcatctggttcgtggaggcagccgcg 382 |||||||| |||||| ||||||||||||||||||||| Sbjct: 406 tgcaccggcgagggcgcgtggttcgtggaggcagccgcg 444
>ref|NM_001048731.1| Oryza sativa (japonica cultivar-group) Os01g0179000 (Os01g0179000) mRNA, complete cds Length = 1314 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1146 tgtcggactggagtcgtctcggcttcgacgaggtggactacgg 1188 |||||||||||| || || ||||||| ||||||||||||||| Sbjct: 1106 tgtcggactggacccggctgggcttcgccgaggtggactacgg 1148 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 518 tgcggtgggttcgccgtcgggatccgtttcagccacgcggtg 559 ||||| || |||| ||||||| |||| ||||||||||||||| Sbjct: 463 tgcggcggcttcgtcgtcgggttccggttcagccacgcggtg 504
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 388 cgcgctcgccgacgtcgacggcc 410 ||||||||||||||||||||||| Sbjct: 78541 cgcgctcgccgacgtcgacggcc 78519
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 388 cgcgctcgccgacgtcgacggcc 410 ||||||||||||||||||||||| Sbjct: 3287416 cgcgctcgccgacgtcgacggcc 3287438
>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12, complete sequence Length = 135323 Score = 46.1 bits (23), Expect = 0.39 Identities = 35/39 (89%) Strand = Plus / Minus Query: 344 tgcaccggagagggcatctggttcgtggaggcagccgcg 382 |||||||| |||||| ||||||||||||||||||||| Sbjct: 83749 tgcaccggcgagggcgcgtggttcgtggaggcagccgcg 83711
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.39 Identities = 26/27 (96%) Strand = Plus / Minus Query: 388 cgcgctcgccgacgtcgacggcctcga 414 ||||||||||||||||| ||||||||| Sbjct: 4429541 cgcgctcgccgacgtcgtcggcctcga 4429515
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.39 Identities = 35/39 (89%) Strand = Plus / Minus Query: 344 tgcaccggagagggcatctggttcgtggaggcagccgcg 382 |||||||| |||||| ||||||||||||||||||||| Sbjct: 11514255 tgcaccggcgagggcgcgtggttcgtggaggcagccgcg 11514217
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1146 tgtcggactggagtcgtctcggcttcgacgaggtggactacgg 1188 |||||||||||| || || ||||||| ||||||||||||||| Sbjct: 76641 tgtcggactggacccggctgggcttcgccgaggtggactacgg 76599 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 518 tgcggtgggttcgccgtcgggatccgtttcagccacgcggtg 559 ||||| || |||| ||||||| |||| ||||||||||||||| Sbjct: 77284 tgcggcggcttcgtcgtcgggttccggttcagccacgcggtg 77243
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 46.1 bits (23), Expect = 0.39 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1146 tgtcggactggagtcgtctcggcttcgacgaggtggactacgg 1188 |||||||||||| || || ||||||| ||||||||||||||| Sbjct: 56869 tgtcggactggacccggctgggcttcgccgaggtggactacgg 56827 Score = 44.1 bits (22), Expect = 1.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 518 tgcggtgggttcgccgtcgggatccgtttcagccacgcggtg 559 ||||| || |||| ||||||| |||| ||||||||||||||| Sbjct: 57512 tgcggcggcttcgtcgtcgggttccggttcagccacgcggtg 57471
>dbj|AK067851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P12, full insert sequence Length = 1553 Score = 46.1 bits (23), Expect = 0.39 Identities = 35/39 (89%) Strand = Plus / Plus Query: 344 tgcaccggagagggcatctggttcgtggaggcagccgcg 382 |||||||| |||||| ||||||||||||||||||||| Sbjct: 407 tgcaccggcgagggcgcgtggttcgtggaggcagccgcg 445
>ref|XM_556948.1| Anopheles gambiae str. PEST ENSANGP00000026833 (ENSANGG00000022444), partial mRNA Length = 591 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1045 ggtacgggaggccaaggaggagg 1067 ||||||||||||||||||||||| Sbjct: 417 ggtacgggaggccaaggaggagg 439
>dbj|D50308.1| Lysobacter lactamgenus DNA for alpha-aminoadipyl-cysteinyl-valine synthetase, complete cds Length = 11401 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1325 gccgcgttcgccgtcgagctcgc 1347 ||||||||||||||||||||||| Sbjct: 579 gccgcgttcgccgtcgagctcgc 557
>emb|CR855191.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0157A06, complete sequence Length = 80209 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 338 gtggactgcaccggagagggcatctggttcgtggaggc 375 |||||||||||||| ||||| ||| |||||||||||| Sbjct: 43729 gtggactgcaccggcgagggggtctcgttcgtggaggc 43692
>ref|NM_001051744.1| Oryza sativa (japonica cultivar-group) Os01g0919200 (Os01g0919200) mRNA, complete cds Length = 1374 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 855 cgctggcgctggcgtcggcgct 876 |||||||||||||||||||||| Sbjct: 275 cgctggcgctggcgtcggcgct 296
>gb|CP000362.1| Roseobacter denitrificans OCh 114, complete genome Length = 4133097 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 813 ccacctttgacgtggtgacggtcatg 838 ||||||||| |||||||||||||||| Sbjct: 3681281 ccacctttgccgtggtgacggtcatg 3681256
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 855 cgctggcgctggcgtcggcgct 876 |||||||||||||||||||||| Sbjct: 827486 cgctggcgctggcgtcggcgct 827507
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||||||| |||||| ||||||||||||||| |||| Sbjct: 109732 ctcggcttctccgaggtcgactacggcttcggcccgcc 109695
>gb|AC012154.16| Homo sapiens 3 BAC RP11-48H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193829 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1568 tactttattactctctttgaaa 1589 |||||||||||||||||||||| Sbjct: 106536 tactttattactctctttgaaa 106515
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1322 gccgccgcgttcgccgtcgagc 1343 |||||||||||||||||||||| Sbjct: 2066991 gccgccgcgttcgccgtcgagc 2067012 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1322 gccgccgcgttcgccgtcgagc 1343 |||||||||||||||||||||| Sbjct: 2075223 gccgccgcgttcgccgtcgagc 2075244
>emb|AJ567372.1|HVU567372 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase (pglcat6 gene), clone 3 Length = 1831 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 956 ggctactacggcaactgcgtgt 977 |||||||||||||||||||||| Sbjct: 1562 ggctactacggcaactgcgtgt 1583
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 855 cgctggcgctggcgtcggcgct 876 |||||||||||||||||||||| Sbjct: 35097 cgctggcgctggcgtcggcgct 35076
>dbj|AK100437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088P12, full insert sequence Length = 1375 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 855 cgctggcgctggcgtcggcgct 876 |||||||||||||||||||||| Sbjct: 276 cgctggcgctggcgtcggcgct 297
>dbj|AK071325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089P04, full insert sequence Length = 1376 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 855 cgctggcgctggcgtcggcgct 876 |||||||||||||||||||||| Sbjct: 277 cgctggcgctggcgtcggcgct 298
>ref|XM_760329.1| Theileria parva strain Muguga hypothetical protein (TP02_0854) partial mRNA Length = 1893 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1219 caacaaccacgtcaacttcgtc 1240 |||||||||||||||||||||| Sbjct: 1830 caacaaccacgtcaacttcgtc 1851
>gb|AY110165.1| Zea mays CL20454_1 mRNA sequence Length = 1000 Score = 44.1 bits (22), Expect = 1.5 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1163 ctcggcttcgacgaggtggactacggcttcggcgcgcc 1200 ||||||||| |||||| ||||||||||||||| |||| Sbjct: 545 ctcggcttctccgaggtcgactacggcttcggcccgcc 582
>emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa0028B04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158885 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1322 gccgccgcgttcgccgtcgagc 1343 |||||||||||||||||||||| Sbjct: 97884 gccgccgcgttcgccgtcgagc 97905 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1322 gccgccgcgttcgccgtcgagc 1343 |||||||||||||||||||||| Sbjct: 106116 gccgccgcgttcgccgtcgagc 106137
>emb|CT737349.5| Pig DNA sequence from clone CH242-21M14 on chromosome 7, complete sequence Length = 201657 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1428 ctgcaatttcttttttaaactttcc 1452 ||||||||| ||||||||||||||| Sbjct: 65670 ctgcaattttttttttaaactttcc 65646
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1320 atgccgccgcgttcgccgtcgagctcgcc 1348 ||||||||||||||||| |||| |||||| Sbjct: 4990872 atgccgccgcgttcgccctcgatctcgcc 4990900
>emb|CT990571.1| Wallaby DNA sequence from clone MEKBa-465N20, complete sequence Length = 182375 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cctcctcccaggtcctccccc 465 ||||||||||||||||||||| Sbjct: 149450 cctcctcccaggtcctccccc 149470
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1081 cgcgggctggatgcgcggcgtcgag 1105 |||||||| |||||||||||||||| Sbjct: 1379180 cgcgggcttgatgcgcggcgtcgag 1379156
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1081 cgcgggctggatgcgcggcgtcgag 1105 |||||||| |||||||||||||||| Sbjct: 2603977 cgcgggcttgatgcgcggcgtcgag 2603953
>gb|AC132332.2| Mus musculus BAC clone RP24-222H7 from chromosome 10, complete sequence Length = 155268 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ctcctcccaggtcctccccct 466 ||||||||||||||||||||| Sbjct: 149717 ctcctcccaggtcctccccct 149697
>gb|AC098974.2| Homo sapiens chromosome 3 clone RP11-320M6, complete sequence Length = 185761 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1434 tttcttttttaaactttccct 1454 ||||||||||||||||||||| Sbjct: 28118 tttcttttttaaactttccct 28138
>gb|AF388659.1| Apis mellifera 1D-myo-inositol-trisphosphate 3-kinase (ip3k) gene, complete cds, alternatively spliced; and NFRKB-like protein gene, complete cds Length = 21538 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1446 actttccctcctttattccaa 1466 ||||||||||||||||||||| Sbjct: 13416 actttccctcctttattccaa 13396
>gb|DQ083762.1| Burkholderia sp. BCC6 polyhydroxybutyrate synthase (phaC) gene, partial cds Length = 1348 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1081 cgcgggctggatgcgcggcgtcgag 1105 |||||||| |||||||||||||||| Sbjct: 608 cgcgggcttgatgcgcggcgtcgag 632
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1258 caggccgccggcgcccaggcg 1278 ||||||||||||||||||||| Sbjct: 41067 caggccgccggcgcccaggcg 41047
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1258 caggccgccggcgcccaggcg 1278 ||||||||||||||||||||| Sbjct: 304945 caggccgccggcgcccaggcg 304925
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1258 caggccgccggcgcccaggcg 1278 ||||||||||||||||||||| Sbjct: 276007 caggccgccggcgcccaggcg 275987
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1081 cgcgggctggatgcgcggcgtcgag 1105 |||||||| |||||||||||||||| Sbjct: 1778175 cgcgggcttgatgcgcggcgtcgag 1778199
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 acgcggcaccttctccgcggc 937 ||||||||||||||||||||| Sbjct: 92310 acgcggcaccttctccgcggc 92290
>emb|AL645792.7| Zebrafish DNA sequence from clone RP71-1D10 in linkage group 14 Contains two novel genes similar to MATR3 (matrin 3), a novel gene similar to PDE6A (cGMP-specific phosphodiesterase 6A alpha (rod)), a novel gene similar to PERC (PGC-1-related estrogen receptor alpha coactivator) and two CpG islands, complete sequence Length = 170221 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1438 ttttttaaactttccctcctttatt 1462 |||||| |||||||||||||||||| Sbjct: 42422 tttttttaactttccctcctttatt 42446
>emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chromosome 11, complete sequence Length = 158968 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1427 cctgcaatttcttttttaaactttc 1451 |||||||||||||||||| |||||| Sbjct: 6343 cctgcaatttcttttttatactttc 6367
>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184696 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ctcctcccaggtcctccccct 466 ||||||||||||||||||||| Sbjct: 136912 ctcctcccaggtcctccccct 136932
>gb|AC104564.11| Homo sapiens chromosome 17, clone RP11-68I3, complete sequence Length = 173058 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 agctcctcctcccaggtcctc 461 ||||||||||||||||||||| Sbjct: 134003 agctcctcctcccaggtcctc 134023
>gb|AY108074.1| Zea mays PCO123641 mRNA sequence Length = 968 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 204 ccccgccctcggtctccgccgcgcgcaag 232 |||||||||||| ||||||||||||||| Sbjct: 155 ccccgccctcggcgtccgccgcgcgcaag 183
>gb|AY106881.1| Zea mays PCO146606 mRNA sequence Length = 535 Score = 42.1 bits (21), Expect = 6.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1146 tgtcggactggagtcgtctcggcttcgacgaggtggactacggct 1190 |||||||||||| || || ||||||| |||||||||||||||| Sbjct: 173 tgtcggactggacgcggctgggcttcgcggaggtggactacggct 217
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcgctcgccgacgtcgacggc 409 ||||||||||||||||||||| Sbjct: 2353693 gcgctcgccgacgtcgacggc 2353673
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1081 cgcgggctggatgcgcggcgtcgag 1105 |||||||| |||||||||||||||| Sbjct: 2537719 cgcgggcttgatgcgcggcgtcgag 2537743
>emb|CR848815.7| Zebrafish DNA sequence from clone CH211-197C11 in linkage group 15, complete sequence Length = 161902 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1370 attcaggcttcccatttcctc 1390 ||||||||||||||||||||| Sbjct: 44890 attcaggcttcccatttcctc 44910 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 213,306,362 Number of extensions: 11665060 Number of successful extensions: 266259 Number of sequences better than 10.0: 75 Number of HSP's gapped: 266253 Number of HSP's successfully gapped: 105 Length of query: 1604 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1581 Effective length of database: 18,503,978,556 Effective search space: 29254790097036 Effective search space used: 29254790097036 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
