>P0A5P4:ERP_MYCTU Exported repetitive protein precursor - Mycobacterium tuberculosis|
          Length = 284
 Score = 34.3 bits (77), Expect(2) = 0.012
 Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +1

Query: 265 PDSVDPALMCLFPGSSAVPGRFPAVPCPRHGASPVARATGLRRPAQVDR*QRS-RGLQPC 441
           P    P L    PGS A PG   A P P  GA+P      L  P        S  GL P 
Sbjct: 112 PALTSPGLTPTLPGSLAAPGTTLA-PTPGVGANPALTNPALTSPTGATPGLTSPTGLDPA 170

Query: 442 LGHASPGPCLT-LGLQP 489
           LG A+  P  T +GL P
Sbjct: 171 LGGANEIPITTPVGLDP 187



 Score = 24.6 bits (52), Expect(2) = 0.012
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 204 SMGGVEPPPRPYFARYGEALTGFRGP 281
           S  G+  PP P     G+A TG  GP
Sbjct: 67  SQFGINIPPVPSLTGSGDASTGLTGP 92

>P0A5P5:ERP_MYCBO Exported repetitive protein precursor - Mycobacterium bovis|
          Length = 284

 Score = 34.3 bits (77), Expect(2) = 0.012
 Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +1

Query: 265 PDSVDPALMCLFPGSSAVPGRFPAVPCPRHGASPVARATGLRRPAQVDR*QRS-RGLQPC 441
           P    P L    PGS A PG   A P P  GA+P      L  P        S  GL P 
Sbjct: 112 PALTSPGLTPTLPGSLAAPGTTLA-PTPGVGANPALTNPALTSPTGATPGLTSPTGLDPA 170

Query: 442 LGHASPGPCLT-LGLQP 489
           LG A+  P  T +GL P
Sbjct: 171 LGGANEIPITTPVGLDP 187



 Score = 24.6 bits (52), Expect(2) = 0.012
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 204 SMGGVEPPPRPYFARYGEALTGFRGP 281
           S  G+  PP P     G+A TG  GP
Sbjct: 67  SQFGINIPPVPSLTGSGDASTGLTGP 92

>P27692:SPT5_YEAST Transcription elongation factor SPT5 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 1063

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -3

Query: 411  AVNLGGSSQSRRTSNRGGAMA--GTWNGGEAAWHGGGAREQAHQGRVHGIRS 262
            AVN  G S     S+ GGA    G  NGG +AW G G    A  G+  G  S
Sbjct: 918  AVNAHGGSGGGGVSSWGGASTWGGQGNGGASAWGGAGGGASAWGGQGTGATS 969

>P58599:GUN1_RALSO Endoglucanase precursor - Ralstonia solanacearum (Pseudomonas|
           solanacearum)
          Length = 424

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = -1

Query: 473 VRHGPGEAWPRQGWSPRERC*RSTW-----AGL--LSPVARATGEAPWRGHGTAGKRPGT 315
           VR+G G AW  +  S   +C  + +     AG+  +  VA+ TG   WRG   AG   G 
Sbjct: 70  VRYGAGSAWVAKSMSGTGQCTAAFFGKDPAAGVAKVCQVAQGTGTLLWRGVSLAGAEFGE 129

Query: 314 AEEPG 300
              PG
Sbjct: 130 GSLPG 134

>A4QYM6:DRS1_MAGGR ATP-dependent RNA helicase DRS1 - Magnaporthe grisea (Rice blast|
           fungus) (Pyricularia grisea)
          Length = 790

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 24/75 (32%), Positives = 32/75 (42%)
 Frame = -3

Query: 501 PRPTWLETKSKAWPRRGMAQARLEPTRALLAVNLGGSSQSRRTSNRGGAMAGTWNGGEAA 322
           P+ TW ET+      R   +A L   R  L    GG + S +   +  AMA      EA 
Sbjct: 687 PKRTWFETEKDKKAAREAGRAALNGVREALKKKHGGKNLSNKDKKKLDAMA---EAKEAR 743

Query: 321 WHGGGAREQAHQGRV 277
               GA E+A +G V
Sbjct: 744 VWKKGAAERAGKGAV 758

>P17974:GUN2_RALSO Endoglucanase precursor - Ralstonia solanacearum (Pseudomonas|
           solanacearum)
          Length = 426

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
 Frame = -1

Query: 473 VRHGPGEAWPRQGWSPRERC*RSTWAG--------LLSPVARATGEAPWRGHGTAGKRPG 318
           VR+G G AW  +  S   RC  ST+ G         +  + + TG   WRG   AG   G
Sbjct: 72  VRYGAGSAWVEKSVSGSGRC-TSTFFGKDPAAGVAKVCQLLQGTGTLLWRGVSLAGAEFG 130

Query: 317 TAEEPG 300
               PG
Sbjct: 131 EGSLPG 136

>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)|
          Length = 157

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 25/76 (32%), Positives = 27/76 (35%)
 Frame = -2

Query: 364 GRRHGGDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYLAKYGRGGGSTPPMEFVSSDK 185
           GRR GG     G G    R +G G  G G R           YG GGG            
Sbjct: 92  GRREGGGGGYGGGGGYGGRREGGGGGGYGGRREGGG----GGYGGGGGG----------- 136

Query: 184 RERERLGGNRESGEGG 137
                 GG RE G+GG
Sbjct: 137 -----YGGRREGGDGG 147

>Q9VU84:DBNL_DROME Drebrin-like protein - Drosophila melanogaster (Fruit fly)|
          Length = 531

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 14/49 (28%)
 Frame = +2

Query: 515 TKPPRQPSRN--------------QDSLHQAPDRAAGPAGPLHRLGPEP 619
           T+PP +P+RN              QD+   +P RAA PA PL    PEP
Sbjct: 298 TQPPAKPARNSIAQRINVFNQNQPQDAPVPSPPRAASPAKPLPVEAPEP 346

>Q8N1G0:ZN687_HUMAN Zinc finger protein 687 - Homo sapiens (Human)|
          Length = 1237

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 16/114 (14%)
 Frame = -2

Query: 391 FSVPSHEQQGRRHGGDMERRGSGLARRRSQGTG---------TSGQGPRNPVSASPYLAK 239
           F +P  +     H G  E  G G   +   G G         ++G GP  P  AS +   
Sbjct: 16  FDIPDIDANEAIHSGPEENEGPGGPGKPEPGVGSESEDTAAASAGDGPGVPAQASDH--- 72

Query: 238 YGRGGGSTPPMEFVSS-------DKRERERLGGNRESGEGGEITGLSMAGPILP 98
                G  PP   V S          + E L G   +G+G +  G++  GP+ P
Sbjct: 73  -----GLPPPDISVVSVIVKNTVCPEQSEALAGG-SAGDGAQAAGVTKEGPVGP 120

>Q9NSK0:KLC4_HUMAN Kinesin light chain 4 - Homo sapiens (Human)|
          Length = 619

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
 Frame = -3

Query: 432 EPTRALLAVNLGGSSQSRRTSNRGGAMAGTWNGGEAA-----WHGGGAREQAHQGRVHGI 268
           +P        L G S  RRTS  G   +  + GGE A     W G G+      G +  I
Sbjct: 499 DPISQTKVAELLGESDGRRTSQEGPGDSVKFEGGEDASVAVEWSGDGSGTLQRSGSLGKI 558

Query: 267 RSVL 256
           R VL
Sbjct: 559 RDVL 562

>P46942:DB10_NICSY ATP-dependent RNA helicase-like protein DB10 - Nicotiana sylvestris|
           (Wood tobacco)
          Length = 607

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 346 DMERRGSGLARRRSQ-GTGTSGQGPRNPVSASPYLAKY-GRGGG 221
           DM  RG G+ R R+  G+G  G+G R      PY + Y GR GG
Sbjct: 521 DMASRGGGMGRARNHWGSGPGGRGGR----GGPYNSSYVGRNGG 560

>Q9XZV1:SWP1_ENCCU Spore wall protein 1 precursor - Encephalitozoon cuniculi|
          Length = 450

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
 Frame = -2

Query: 364 GRRHGGDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYLAKYGRG-GGSTPPMEFVSSD 188
           G   G   +  GSG +   S G+G+ G G       S      G G GGS+       SD
Sbjct: 366 GGSSGSGSDGSGSGGSSGGSSGSGSDGSGSGGSSGGSSGSGSDGSGSGGSSGGSSGSGSD 425

Query: 187 -KRERERLGGNRESGEGGEITGLS 119
                   GG+  SG GGE  G S
Sbjct: 426 GSGSGGSSGGSSGSGSGGESGGSS 449

>P49796:RGS3_HUMAN Regulator of G-protein signaling 3 - Homo sapiens (Human)|
          Length = 1198

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = -2

Query: 370  QQGRRHGGDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYL--AKYGRGGGSTPPMEFV 197
            + G+   G +  R     RRR+   G+  Q PR P  AS        G G  ST  M   
Sbjct: 920  ETGQGAEGGLSLRVQNSLRRRTHSEGSLLQEPRGPCFASDTTLHCSDGEGAASTWGMPSP 979

Query: 196  SSDKRERERLGGN 158
            S+ K+E  R GG+
Sbjct: 980  STLKKELGRNGGS 992

>Q1E5R1:DHH1_COCIM ATP-dependent RNA helicase DHH1 - Coccidioides immitis|
          Length = 512

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 399 GGSSQSRRTSNRGGAMAGTWNGGEAAWHGGGARE 298
           GG  Q  +T+NRG ++ G++ GG A  H GG  E
Sbjct: 461 GGHGQ--QTANRGHSLRGSYRGGRAQGHRGGHPE 492

>Q9Y3X0:CCDC9_HUMAN Coiled-coil domain-containing protein 9 - Homo sapiens (Human)|
          Length = 531

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 370 QQGRRHG-GDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYLAKYGRGGGSTPPMEFVS 194
           QQG R G G   R   G    + +G G  G+G R     SP+L+    G G T   +  S
Sbjct: 98  QQGGRAGMGRASRSWEGSPGEQPRGGGAGGRGRRGRGRGSPHLS----GAGDTSISDRKS 153

Query: 193 SDKRERER 170
            +  ER R
Sbjct: 154 KEWEERRR 161

>Q3UHC0:TNR6C_MOUSE Trinucleotide repeat-containing gene 6C protein - Mus musculus|
           (Mouse)
          Length = 1690

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 30/103 (29%), Positives = 39/103 (37%), Gaps = 15/103 (14%)
 Frame = -2

Query: 379 SHEQQGRRHGGDMERRGSGLARRRSQGTGTSG--QGPRNPVSASPYLAKYGRGGGSTP-- 212
           S +  G  + G   R G+G  RRR +G    G  Q PRN +           G G TP  
Sbjct: 399 SSDGSGNHNEGSTGREGTGEGRRRDKGVLDQGHIQLPRNDLDPR---VLSNSGWGQTPVK 455

Query: 211 ---PMEFVSSDKRERERLGG--------NRESGEGGEITGLSM 116
                EF  S + ER+   G         + S  GG+  G  M
Sbjct: 456 QNTAWEFEESPRSERKNDNGTEAWGSIATQPSNSGGKTDGSIM 498

>Q9Y6Q9:NCOA3_HUMAN Nuclear receptor coactivator 3 - Homo sapiens (Human)|
          Length = 1424

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
 Frame = -2

Query: 355  HGGDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYLAKYGRGG--------GSTPPMEF 200
            +   +   GS L  ++    GT+  G ++  S       Y R          GS+PP++ 
Sbjct: 813  YNNSISSNGSHLGTKQQVFQGTNSLGLKSSQSVQSIRPPYNRAVSLDSPVSVGSSPPVKN 872

Query: 199  VSSDKR--ERERLGGNRESGEGGEITGLSMAGP 107
            +S+     ++  LGGN    +  E  G SM GP
Sbjct: 873  ISAFPMLPKQPMLGGNPRMMDSQENYGSSMGGP 905

>P51116:FXR2_HUMAN Fragile X mental retardation syndrome-related protein 2 - Homo|
           sapiens (Human)
          Length = 673

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = -2

Query: 382 PSHEQQGRRHGGDMERRGSGLARRRSQGTGTSGQ--GPRNPVSASPYLAKYGRGGGSTPP 209
           P+  + G       +RR     RRR++G  T G   G R PV+ + Y+++        PP
Sbjct: 569 PNMTENGLEDESRPQRRNRS-RRRRNRGNRTDGSISGDRQPVTVADYISRAESQSRQRPP 627

Query: 208 MEFVSSDKRERERLGGNRESGEGGEITGLSMAGP 107
           +        ER +   +  SG+ G+       GP
Sbjct: 628 L--------ERTKPSEDSLSGQKGDSVSKLPKGP 653

>Q3U3N6:CQ056_MOUSE Uncharacterized protein C17orf56 homolog - Mus musculus (Mouse)|
          Length = 573

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = -1

Query: 473 VRHGPGEAWPRQGWSPRERC*RSTWAGLLSPVARATGEAPWRGHGTAGKRPGTAEEPGNR 294
           VRH PG+A    GW   +    S  +   S ++RA+      G   +    GT+ EPG+ 
Sbjct: 244 VRHQPGQAGG--GWDELDSSPSSQNSSCTSNLSRASDSGSRSG---SDSHSGTSREPGDL 298

Query: 293 HIRAGSTESGQC 258
             RA +T    C
Sbjct: 299 AERAEATPPNDC 310

>Q9WVC7:AKAP6_RAT A-kinase anchor protein 6 - Rattus norvegicus (Rat)|
          Length = 2314

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -2

Query: 340  ERRGSGLARRRSQGTGTSGQGPRN--PVSASPYLAKYGRGGGSTPPMEFVSSDKRERERL 167
            E  G+G    R+ G+GT G+  ++   VS  P++A    G   + P       +RERE+ 
Sbjct: 1856 ENNGNGKTPPRTHGSGTKGENKKSTYDVSKDPHVADMENGNIESTP-------EREREKP 1908

Query: 166  GGNRESGE 143
             G  E  E
Sbjct: 1909 QGLPEVSE 1916

>Q1QNY6:RS21_NITHX 30S ribosomal protein S21 - Nitrobacter hamburgensis (strain X14 /|
           DSM 10229)
          Length = 95

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -2

Query: 358 RHGGDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYLAKYGRGGGSTPP 209
           R   +  RR   LAR++ Q  G     P+    A P   + G G G+ PP
Sbjct: 45  REKAEAVRRARKLARKKMQREGLLPMKPKPVFGAGPGAGRGGPGAGARPP 94

>Q9Z7S4:RL15_CHLPN 50S ribosomal protein L15 - Chlamydia pneumoniae (Chlamydophila|
           pneumoniae)
          Length = 144

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 346 DMERRGSGLARRRSQGTG-TSGQGPRNPVSASPYLAKYGRGGGSTP 212
           + +RR   L R  S G G TSG+G +   S S Y  ++G  GG  P
Sbjct: 12  ERKRRKKLLGRGPSSGHGKTSGRGHKGDGSRSGYKRRFGYEGGGVP 57

>Q9PJN0:RL15_CHLMU 50S ribosomal protein L15 - Chlamydia muridarum|
          Length = 144

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
 Frame = -2

Query: 340 ERRGSGLARRRSQGTG-TSGQGPRNPVSASPYLAKYGRGGGSTPPMEFVS----SDKR-- 182
           +RR   L R  S G G TSG+G +   S S Y  ++G  GG  P    V     S KR  
Sbjct: 14  KRRTKLLGRGPSSGHGKTSGRGHKGDGSRSGYKRRFGYEGGGVPLYRRVPTRGFSHKRFD 73

Query: 181 ------ERERLGGNRESGE 143
                   +RL G  E+GE
Sbjct: 74  KCVEEITTQRLNGIFENGE 92

>P12447:NEF_HV2SB Protein Nef - Human immunodeficiency virus type 2 (isolate SBLISY|
           subtype A) (HIV-2)
          Length = 256

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -3

Query: 447 AQARLEPTRALLAVNLGGSSQSRRTSNRGGAMAGTWN---GGEAAWHGGGAREQ 295
           ++ R  P+R L         Q R    RGGA  G W+   GG + +H G  REQ
Sbjct: 6   SKKRSRPSRGL---------QERLLRARGGACGGLWDESEGGYSQFHEGSGREQ 50

>Q6IMF3:K2C1_RAT Keratin, type II cytoskeletal 1 - Rattus norvegicus (Rat)|
          Length = 625

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -3

Query: 375 TSNRGGAMAGTWNGGEAAWHGGGAREQAHQG 283
           TS+RGG   G+  GG    +GGG+R  ++ G
Sbjct: 514 TSSRGGGRYGSGGGGGGGTYGGGSRGGSYGG 544

>Q80WJ1:GGN_MOUSE Gametogenetin - Mus musculus (Mouse)|
          Length = 673

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 385 VPSHEQQGRRHGGDMERRGSGLARRRSQGTGTSGQGPRNPVSASPYLAKYGRGGGST 215
           +P  + + RR+ G   R   G+ R      GTSG GPR P +A    +  G GGG +
Sbjct: 537 MPQPKTRTRRNKGP--RAARGVIREE----GTSGDGPREPNTAPVTDSSSGGGGGGS 587


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 120,531,728
Number of extensions: 2589572
Number of successful extensions: 10883
Number of sequences better than 10.0: 26
Number of HSP's gapped: 10726
Number of HSP's successfully gapped: 28
Length of query: 251
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 140
Effective length of database: 70,239,694
Effective search space: 9833557160
Effective search space used: 9833557160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)