| Clone Name | FLbaf146e06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829808.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104A14, full insert sequence Length = 749 Score = 188 bits (95), Expect = 2e-44 Identities = 193/224 (86%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaaga 201 ||||| ||| |||||||||||||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 99 ccgccgccggcgccggcgccggcaagtcgctgttccagaccttccgcaagttcttcaaga 158 Query: 202 agccgtgggagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtg 261 |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| | Sbjct: 159 agccgtgggagatcaccggcccgtgcgcctcccccgagtaccgcagcgcgctcccgggcg 218 Query: 262 cgctcgagtaccgtcaaacctgcccggccacccttcgcga-gaacgaccccaaggccgtc 320 | || |||||||| || ||||||||||||||| || ||| ||| | | ||||||| Sbjct: 219 ccctggagtaccgccaccgctgcccggccaccct----gacgaaggacacgatggccgtc 274 Query: 321 atccccacctccgacccggagaccgtgttcgacatcaagtacta 364 | ||||||||||| || |||||||| | ||||||||||||||| Sbjct: 275 gtgcccacctccgagcccgagaccgtctacgacatcaagtacta 318 Score = 139 bits (70), Expect = 2e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct: 378 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccccgtgcctt 437 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||| | | ||||| |||||||||||| |||||||||||||||||||| Sbjct: 438 acgtgaacaccgccgtggaggaggactacgacgccgtcggcggcggctac 487 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 134 cccgatggccgcctccgccgccggcgccggc 164 ||||||||||||||||||| ||| ||||||| Sbjct: 79 cccgatggccgcctccgcctccgccgccggc 109 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttgtgga 682 ||||||||||| |||||||| ||||||||| || ||| |||||| Sbjct: 598 tctggttgtaagagatgatggcggcaataatatgacacctgtgga 642
>ref|NM_001050869.1| Oryza sativa (japonica cultivar-group) Os01g0763300 (Os01g0763300) mRNA, partial cds Length = 732 Score = 188 bits (95), Expect = 2e-44 Identities = 193/224 (86%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaaga 201 ||||| ||| |||||||||||||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 82 ccgccgccggcgccggcgccggcaagtcgctgttccagaccttccgcaagttcttcaaga 141 Query: 202 agccgtgggagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtg 261 |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| | Sbjct: 142 agccgtgggagatcaccggcccgtgcgcctcccccgagtaccgcagcgcgctcccgggcg 201 Query: 262 cgctcgagtaccgtcaaacctgcccggccacccttcgcga-gaacgaccccaaggccgtc 320 | || |||||||| || ||||||||||||||| || ||| ||| | | ||||||| Sbjct: 202 ccctggagtaccgccaccgctgcccggccaccct----gacgaaggacacgatggccgtc 257 Query: 321 atccccacctccgacccggagaccgtgttcgacatcaagtacta 364 | ||||||||||| || |||||||| | ||||||||||||||| Sbjct: 258 gtgcccacctccgagcccgagaccgtctacgacatcaagtacta 301 Score = 139 bits (70), Expect = 2e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct: 361 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccccgtgcctt 420 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||| | | ||||| |||||||||||| |||||||||||||||||||| Sbjct: 421 acgtgaacaccgccgtggaggaggactacgacgccgtcggcggcggctac 470 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 134 cccgatggccgcctccgccgccggcgccggc 164 ||||||||||||||||||| ||| ||||||| Sbjct: 62 cccgatggccgcctccgcctccgccgccggc 92 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttgtgga 682 ||||||||||| |||||||| ||||||||| || ||| |||||| Sbjct: 581 tctggttgtaagagatgatggcggcaataatatgacacctgtgga 625
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 188 bits (95), Expect = 2e-44 Identities = 193/224 (86%), Gaps = 5/224 (2%) Strand = Plus / Minus Query: 142 ccgcctccgccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaaga 201 ||||| ||| |||||||||||||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 32121160 ccgccgccggcgccggcgccggcaagtcgctgttccagaccttccgcaagttcttcaaga 32121101 Query: 202 agccgtgggagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtg 261 |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| | Sbjct: 32121100 agccgtgggagatcaccggcccgtgcgcctcccccgagtaccgcagcgcgctcccgggcg 32121041 Query: 262 cgctcgagtaccgtcaaacctgcccggccacccttcgcga-gaacgaccccaaggccgtc 320 | || |||||||| || ||||||||||||||| || ||| ||| | | ||||||| Sbjct: 32121040 ccctggagtaccgccaccgctgcccggccaccct----gacgaaggacacgatggccgtc 32120985 Query: 321 atccccacctccgacccggagaccgtgttcgacatcaagtacta 364 | ||||||||||| || |||||||| | ||||||||||||||| Sbjct: 32120984 gtgcccacctccgagcccgagaccgtctacgacatcaagtacta 32120941 Score = 139 bits (70), Expect = 2e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct: 32120881 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccccgtgcctt 32120822 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||| | | ||||| |||||||||||| |||||||||||||||||||| Sbjct: 32120821 acgtgaacaccgccgtggaggaggactacgacgccgtcggcggcggctac 32120772 Score = 48.1 bits (24), Expect = 0.053 Identities = 24/24 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggca 165 |||||||||||||||||||||||| Sbjct: 28357376 ccgcctccgccgccggcgccggca 28357399 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 134 cccgatggccgcctccgccgccggcgccggc 164 ||||||||||||||||||| ||| ||||||| Sbjct: 32121180 cccgatggccgcctccgcctccgccgccggc 32121150 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccg 162 |||||||||||||||||||||| Sbjct: 11767535 gccgcctccgccgccggcgccg 11767556 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 138 atggccgcctccgccgccggcgccg 162 |||||||| |||||||||||||||| Sbjct: 22705698 atggccgcgtccgccgccggcgccg 22705674 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttgtgga 682 ||||||||||| |||||||| ||||||||| || ||| |||||| Sbjct: 32116705 tctggttgtaagagatgatggcggcaataatatgacacctgtgga 32116661
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 188 bits (95), Expect = 2e-44 Identities = 193/224 (86%), Gaps = 5/224 (2%) Strand = Plus / Minus Query: 142 ccgcctccgccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaaga 201 ||||| ||| |||||||||||||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 162974 ccgccgccggcgccggcgccggcaagtcgctgttccagaccttccgcaagttcttcaaga 162915 Query: 202 agccgtgggagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtg 261 |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| | Sbjct: 162914 agccgtgggagatcaccggcccgtgcgcctcccccgagtaccgcagcgcgctcccgggcg 162855 Query: 262 cgctcgagtaccgtcaaacctgcccggccacccttcgcga-gaacgaccccaaggccgtc 320 | || |||||||| || ||||||||||||||| || ||| ||| | | ||||||| Sbjct: 162854 ccctggagtaccgccaccgctgcccggccaccct----gacgaaggacacgatggccgtc 162799 Query: 321 atccccacctccgacccggagaccgtgttcgacatcaagtacta 364 | ||||||||||| || |||||||| | ||||||||||||||| Sbjct: 162798 gtgcccacctccgagcccgagaccgtctacgacatcaagtacta 162755 Score = 139 bits (70), Expect = 2e-29 Identities = 100/110 (90%) Strand = Plus / Minus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct: 162695 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccccgtgcctt 162636 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||| | | ||||| |||||||||||| |||||||||||||||||||| Sbjct: 162635 acgtgaacaccgccgtggaggaggactacgacgccgtcggcggcggctac 162586 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 134 cccgatggccgcctccgccgccggcgccggc 164 ||||||||||||||||||| ||| ||||||| Sbjct: 162994 cccgatggccgcctccgcctccgccgccggc 162964 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttgtgga 682 ||||||||||| |||||||| ||||||||| || ||| |||||| Sbjct: 158519 tctggttgtaagagatgatggcggcaataatatgacacctgtgga 158475
>dbj|AK122186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150K13, full insert sequence Length = 724 Score = 188 bits (95), Expect = 2e-44 Identities = 193/224 (86%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaaga 201 ||||| ||| |||||||||||||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 77 ccgccgccggcgccggcgccggcaagtcgctgttccagaccttccgcaagttcttcaaga 136 Query: 202 agccgtgggagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtg 261 |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| | Sbjct: 137 agccgtgggagatcaccggcccgtgcgcctcccccgagtaccgcagcgcgctcccgggcg 196 Query: 262 cgctcgagtaccgtcaaacctgcccggccacccttcgcga-gaacgaccccaaggccgtc 320 | || |||||||| || ||||||||||||||| || ||| ||| | | ||||||| Sbjct: 197 ccctggagtaccgccaccgctgcccggccaccct----gacgaaggacacgatggccgtc 252 Query: 321 atccccacctccgacccggagaccgtgttcgacatcaagtacta 364 | ||||||||||| || |||||||| | ||||||||||||||| Sbjct: 253 gtgcccacctccgagcccgagaccgtctacgacatcaagtacta 296 Score = 139 bits (70), Expect = 2e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct: 356 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccccgtgcctt 415 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||| | | ||||| |||||||||||| |||||||||||||||||||| Sbjct: 416 acgtgaacaccgccgtggaggaggactacgacgccgtcggcggcggctac 465 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 134 cccgatggccgcctccgccgccggcgccggc 164 ||||||||||||||||||| ||| ||||||| Sbjct: 57 cccgatggccgcctccgcctccgccgccggc 87 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttgtgga 682 ||||||||||| |||||||| ||||||||| || ||| |||||| Sbjct: 576 tctggttgtaagagatgatggcggcaataatatgacacctgtgga 620
>dbj|AK063778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-D04, full insert sequence Length = 732 Score = 188 bits (95), Expect = 2e-44 Identities = 193/224 (86%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaaga 201 ||||| ||| |||||||||||||||||| ||| ||||||| |||||||| |||||||||| Sbjct: 82 ccgccgccggcgccggcgccggcaagtcgctgttccagaccttccgcaagttcttcaaga 141 Query: 202 agccgtgggagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtg 261 |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| | Sbjct: 142 agccgtgggagatcaccggcccgtgcgcctcccccgagtaccgcagcgcgctcccgggcg 201 Query: 262 cgctcgagtaccgtcaaacctgcccggccacccttcgcga-gaacgaccccaaggccgtc 320 | || |||||||| || ||||||||||||||| || ||| ||| | | ||||||| Sbjct: 202 ccctggagtaccgccaccgctgcccggccaccct----gacgaaggacacgatggccgtc 257 Query: 321 atccccacctccgacccggagaccgtgttcgacatcaagtacta 364 | ||||||||||| || |||||||| | ||||||||||||||| Sbjct: 258 gtgcccacctccgagcccgagaccgtctacgacatcaagtacta 301 Score = 139 bits (70), Expect = 2e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||| || || | Sbjct: 361 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccccgtgcctt 420 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||| | | ||||| |||||||||||| |||||||||||||||||||| Sbjct: 421 acgtgaacaccgccgtggaggaggactacgacgccgtcggcggcggctac 470 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 134 cccgatggccgcctccgccgccggcgccggc 164 ||||||||||||||||||| ||| ||||||| Sbjct: 62 cccgatggccgcctccgcctccgccgccggc 92 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttgtgga 682 ||||||||||| |||||||| ||||||||| || ||| |||||| Sbjct: 581 tctggttgtaagagatgatggcggcaataatatgacacctgtgga 625
>gb|DQ245311.1| Zea mays clone 14386 mRNA sequence Length = 754 Score = 99.6 bits (50), Expect = 2e-17 Identities = 173/214 (80%) Strand = Plus / Plus Query: 150 gccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaagaagccgtgg 209 ||||||| ||| ||||| || ||| ||||| ||||||| ||| |||| ||||||||| Sbjct: 63 gccgccgccgctggcaaatcgctgttccaggggttccgcaggttcctcaaaaagccgtgg 122 Query: 210 gagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtgcgctcgag 269 |||||||| ||||| ||| |||||||| |||||||||||||||| || || ||||||||| Sbjct: 123 gagatcacgggcccctgcgcctcgcccgagtaccgcagcgcgctgcctggcgcgctcgag 182 Query: 270 taccgtcaaacctgcccggccacccttcgcgagaacgaccccaaggccgtcatccccacc 329 ||||| | |||||||||||| | ||||| || | ||||||| || | ||||| Sbjct: 183 taccgcgtcaagtgcccggccaccgtgcgcgacgaccgcgacaaggccatcgtgcccaca 242 Query: 330 tccgacccggagaccgtgttcgacatcaagtact 363 ||||| |||||||| || | |||||||||||||| Sbjct: 243 tccgatccggagacagtctacgacatcaagtact 276 Score = 83.8 bits (42), Expect = 1e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||| | |||||||||| |||||| ||||||||||||| || || | Sbjct: 337 acctcgagcgctacatggtcaccaagcagtttgaccccaccaaggacttccccgtgccat 396 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||||| | | |||||||||||| ||||| | |||||||| |||||| Sbjct: 397 acgtcaacaccactgtcgaggaggacgacaacacggtcggcggtggctac 446
>gb|AY103881.1| Zea mays PCO073464 mRNA sequence Length = 827 Score = 99.6 bits (50), Expect = 2e-17 Identities = 173/214 (80%) Strand = Plus / Plus Query: 150 gccgccggcgccggcaagtcactgatccagacattccgcaaattcttcaagaagccgtgg 209 ||||||| ||| ||||| || ||| ||||| ||||||| ||| |||| ||||||||| Sbjct: 164 gccgccgccgctggcaaatcgctgttccaggggttccgcaggttcctcaaaaagccgtgg 223 Query: 210 gagatcaccggcccgtgctcctcgcccaagtaccgcagcgcgctcccgggtgcgctcgag 269 |||||||| ||||| ||| |||||||| |||||||||||||||| || || ||||||||| Sbjct: 224 gagatcacgggcccctgcgcctcgcccgagtaccgcagcgcgctgcctggcgcgctcgag 283 Query: 270 taccgtcaaacctgcccggccacccttcgcgagaacgaccccaaggccgtcatccccacc 329 ||||| | |||||||||||| | ||||| || | ||||||| || | ||||| Sbjct: 284 taccgcgtcaagtgcccggccaccgtgcgcgacgaccgcgacaaggccatcgtgcccaca 343 Query: 330 tccgacccggagaccgtgttcgacatcaagtact 363 ||||| |||||||| || | |||||||||||||| Sbjct: 344 tccgatccggagacagtctacgacatcaagtact 377 Score = 83.8 bits (42), Expect = 1e-12 Identities = 93/110 (84%) Strand = Plus / Plus Query: 424 acctcgagcgctacatggccgccaagcagttcgaccccgccaaggacttccctgtcccct 483 |||||||||||||||||| | |||||||||| |||||| ||||||||||||| || || | Sbjct: 438 acctcgagcgctacatggtcaccaagcagtttgaccccaccaaggacttccccgtgccat 497 Query: 484 acgtcatgtctgccgtcgaggaggactacaacgccgtcggcggcggctac 533 |||||| | | |||||||||||| ||||| | |||||||| |||||| Sbjct: 498 acgtcaacaccactgtcgaggaggacgacaacacggtcggcggtggctac 547 Score = 58.0 bits (29), Expect = 5e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 638 tctggttgtaaaagatgatgttggcaataatgtggcacttg 678 |||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 680 tctggttgtaaaagatgatggtggcaataatatggtacttg 720
>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete sequence Length = 70311 Score = 50.1 bits (25), Expect = 0.013 Identities = 25/25 (100%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||||||||||||||||||||| Sbjct: 25522 ggccgcctccgccgccggcgccggc 25498
>ref|NM_001050448.1| Oryza sativa (japonica cultivar-group) Os01g0687500 (Os01g0687500) mRNA, complete cds Length = 1544 Score = 48.1 bits (24), Expect = 0.053 Identities = 24/24 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggca 165 |||||||||||||||||||||||| Sbjct: 81 ccgcctccgccgccggcgccggca 104
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 48.1 bits (24), Expect = 0.053 Identities = 24/24 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggca 165 |||||||||||||||||||||||| Sbjct: 72476 ccgcctccgccgccggcgccggca 72499
>dbj|AK069185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008N17, full insert sequence Length = 1545 Score = 48.1 bits (24), Expect = 0.053 Identities = 24/24 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccggca 165 |||||||||||||||||||||||| Sbjct: 82 ccgcctccgccgccggcgccggca 105
>emb|CT829166.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA031J20, full insert sequence Length = 1200 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 430 gccgcctccgccgccggcgccgg 452
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccg 162 ||||||||||||||||||||||| Sbjct: 3438062 ggccgcctccgccgccggcgccg 3438040
>ref|NM_001057828.1| Oryza sativa (japonica cultivar-group) Os03g0751600 (Os03g0751600) mRNA, partial cds Length = 1132 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 429 gccgcctccgccgccggcgccgg 451
>emb|CT986810.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 639 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Plus Query: 333 gacccggagaccgtgttcgacatcaagtact 363 ||||||||||| |||| |||||||||||||| Sbjct: 155 gacccggagacggtgtacgacatcaagtact 185 Score = 44.1 bits (22), Expect = 0.83 Identities = 31/34 (91%) Strand = Plus / Plus Query: 194 cttcaagaagccgtgggagatcaccggcccgtgc 227 |||||||||||||||||| | |||||||||||| Sbjct: 25 cttcaagaagccgtgggacttaaccggcccgtgc 58
>emb|CT984084.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 357 Score = 46.1 bits (23), Expect = 0.21 Identities = 29/31 (93%) Strand = Plus / Minus Query: 333 gacccggagaccgtgttcgacatcaagtact 363 ||||||||||| |||| |||||||||||||| Sbjct: 107 gacccggagacggtgtacgacatcaagtact 77 Score = 44.1 bits (22), Expect = 0.83 Identities = 31/34 (91%) Strand = Plus / Minus Query: 194 cttcaagaagccgtgggagatcaccggcccgtgc 227 |||||||||||||||||| | |||||||||||| Sbjct: 237 cttcaagaagccgtgggacttaaccggcccgtgc 204
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 105354 gccgcctccgccgccggcgccgg 105332
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 63961 gccgcctccgccgccggcgccgg 63939
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 7132 gccgcctccgccgccggcgccgg 7154
>ref|XM_761010.1| Theileria parva strain Muguga chromosome 1 RNA helicase (TP01_0582) partial mRNA Length = 5295 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 752 taatgaaatttatgaaaaactca 774 ||||||||||||||||||||||| Sbjct: 252 taatgaaatttatgaaaaactca 274
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 30789853 gccgcctccgccgccggcgccgg 30789875
>gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrophosphatase mRNA, complete cds Length = 2671 Score = 46.1 bits (23), Expect = 0.21 Identities = 26/27 (96%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccggcaag 167 ||||||||||||||||||| ||||||| Sbjct: 148 gccgcctccgccgccggcggcggcaag 174
>dbj|AK105937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B08, full insert sequence Length = 1101 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 342 gccgcctccgccgccggcgccgg 364
>dbj|AK104665.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G12, full insert sequence Length = 1014 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 340 gccgcctccgccgccggcgccgg 362
>dbj|AK061520.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A12, full insert sequence Length = 1132 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccgg 163 ||||||||||||||||||||||| Sbjct: 429 gccgcctccgccgccggcgccgg 451
>emb|CT832402.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116K09, full insert sequence Length = 947 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccg 162 |||||||||||||||||||||| Sbjct: 665 gccgcctccgccgccggcgccg 686
>ref|NM_001049403.1| Oryza sativa (japonica cultivar-group) Os01g0313300 (Os01g0313300) mRNA, complete cds Length = 908 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccg 162 |||||||||||||||||||||| Sbjct: 665 gccgcctccgccgccggcgccg 686
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 44.1 bits (22), Expect = 0.83 Identities = 28/30 (93%) Strand = Plus / Plus Query: 501 gaggaggactacaacgccgtcggcggcggc 530 ||||||||||||||||||| |||| ||||| Sbjct: 99951 gaggaggactacaacgccggcggccgcggc 99980
>emb|CT009586.1| Triticum aestivum Length = 107638 Score = 44.1 bits (22), Expect = 0.83 Identities = 28/30 (93%) Strand = Plus / Plus Query: 501 gaggaggactacaacgccgtcggcggcggc 530 ||||||||||||||||||| |||| ||||| Sbjct: 4725 gaggaggactacaacgccggcggccgcggc 4754
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 tcgggccgtagccaccgcaccg 130 |||||||||||||||||||||| Sbjct: 1221071 tcgggccgtagccaccgcaccg 1221050
>emb|CR679511.2|CNS0FN9F Tetraodon nigroviridis full-length cDNA Length = 865 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ccaccctcccccttcccgtcgg 112 |||||||||||||||||||||| Sbjct: 679 ccaccctcccccttcccgtcgg 658
>emb|CR665879.2|CNS0FCRH Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ccaccctcccccttcccgtcgg 112 |||||||||||||||||||||| Sbjct: 682 ccaccctcccccttcccgtcgg 661
>emb|CR663837.2|CNS0FB6R Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 ccaccctcccccttcccgtcgg 112 |||||||||||||||||||||| Sbjct: 682 ccaccctcccccttcccgtcgg 661
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccg 162 |||||||||||||||||||||| Sbjct: 106703 gccgcctccgccgccggcgccg 106724
>dbj|AK111775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G11, full insert sequence Length = 909 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccg 162 |||||||||||||||||||||| Sbjct: 666 gccgcctccgccgccggcgccg 687
>emb|AJ575219.1|OSA575219 Oryza sativa (japonica cultivar-group) partial mRNA for EREBP-3 protein Length = 186 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccg 162 |||||||||||||||||||||| Sbjct: 97 gccgcctccgccgccggcgccg 118
>emb|AL953880.11| Zebrafish DNA sequence from clone CH211-236O11 in linkage group 16, complete sequence Length = 161603 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 86 tgctcccaccctcccccttccc 107 |||||||||||||||||||||| Sbjct: 55749 tgctcccaccctcccccttccc 55770
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 44.1 bits (22), Expect = 0.83 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccgg 163 |||||||||||||||||||||| Sbjct: 874 ccgcctccgccgccggcgccgg 895
>emb|CT827952.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0525G02, complete sequence Length = 112944 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 31884 gccgcctccgccgccggcgcc 31864
>emb|CR855213.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101P20, complete sequence Length = 96688 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctccgccgccggcgccggcaa 166 ||||||||||||||||||||| Sbjct: 31389 ctccgccgccggcgccggcaa 31409
>emb|CR855173.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0402A04, complete sequence Length = 50268 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 atggccgcctccgccgccggcgccg 162 ||||||||||||||||||| ||||| Sbjct: 36418 atggccgcctccgccgccgccgccg 36442
>dbj|AK241994.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075099M14, full insert sequence Length = 1786 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccggca 165 |||||||||||||||| |||||||| Sbjct: 500 gccgcctccgccgccgccgccggca 476
>ref|NM_001074827.1| Oryza sativa (japonica cultivar-group) Os11g0620500 (Os11g0620500) mRNA, complete cds Length = 2485 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||||||||||||| ||||||| Sbjct: 1747 ggccgcctccgccgccgccgccggc 1771
>ref|NM_001074188.1| Oryza sativa (japonica cultivar-group) Os11g0264900 (Os11g0264900) mRNA, complete cds Length = 1053 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 797 gccgcctccgccgccggcgcc 777
>ref|NM_001065583.1| Oryza sativa (japonica cultivar-group) Os07g0182000 (Os07g0182000) mRNA, complete cds Length = 1742 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccggca 165 |||||||||||||||| |||||||| Sbjct: 456 gccgcctccgccgccgccgccggca 432
>ref|NM_001062747.1| Oryza sativa (japonica cultivar-group) Os05g0545400 (Os05g0545400) mRNA, partial cds Length = 1367 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 cgcctccgccgccggcgccggcaag 167 ||||||||||||||||| ||||||| Sbjct: 882 cgcctccgccgccggcgacggcaag 906
>ref|NM_001060407.1| Oryza sativa (japonica cultivar-group) Os04g0615800 (Os04g0615800) mRNA, partial cds Length = 1750 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 1492 gccgcctccgccgccggcgcc 1472
>ref|NM_001059802.1| Oryza sativa (japonica cultivar-group) Os04g0508000 (Os04g0508000) mRNA, complete cds Length = 2487 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ctccgccgccggcgccggcaa 166 ||||||||||||||||||||| Sbjct: 607 ctccgccgccggcgccggcaa 587
>ref|XM_001146833.1| PREDICTED: Pan troglodytes CD2 antigen (p50), sheep red blood cell receptor, transcript variant 1 (CD2), mRNA Length = 1688 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 348 ttccttgaaagtctctttctctttt 324
>ref|XM_513681.2| PREDICTED: Pan troglodytes CD2 antigen (p50), sheep red blood cell receptor, transcript variant 3 (CD2), mRNA Length = 1564 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 303 ttccttgaaagtctctttctctttt 279
>ref|XM_001147046.1| PREDICTED: Pan troglodytes CD2 antigen (p50), sheep red blood cell receptor, transcript variant 2 (CD2), mRNA Length = 1610 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 348 ttccttgaaagtctctttctctttt 324
>gb|DQ894115.1| Homo sapiens clone FLH167909.01L; RZPDo839H0289D CD2 mRNA, partial sequence Length = 1056 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 240 ttccttgaaagtctctttctctttt 216
>gb|DQ890953.1| Synthetic construct Homo sapiens clone FLH167913.01X; RZPDo839H0290D CD2 mRNA, complete sequence Length = 1056 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 240 ttccttgaaagtctctttctctttt 216
>gb|AC189332.1| Brassica rapa subsp. pekinensis clone KBrB038E05, complete sequence Length = 140757 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 tcaagaagccgtgggagatcaccgg 220 |||||||||| |||||||||||||| Sbjct: 30602 tcaagaagccatgggagatcaccgg 30626
>ref|XM_001076573.1| PREDICTED: Rattus norvegicus hypothetical protein LOC691025 (LOC691025), mRNA Length = 2220 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 2096 gccgcctccgccgccggcgcc 2076
>ref|XM_990793.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L26 (Silica-induced gene 20 protein) (SIG-20) (LOC433010), mRNA Length = 544 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 809 aactgcaaacggcatttcaac 829 ||||||||||||||||||||| Sbjct: 97 aactgcaaacggcatttcaac 117
>ref|XR_005009.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L26 (Silica-induced gene 20 protein) (SIG-20) (LOC677088), mRNA Length = 507 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 809 aactgcaaacggcatttcaac 829 ||||||||||||||||||||| Sbjct: 73 aactgcaaacggcatttcaac 93
>ref|XR_001911.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L26 (Silica-induced gene 20 protein) (SIG-20) (LOC666717), mRNA Length = 507 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 809 aactgcaaacggcatttcaac 829 ||||||||||||||||||||| Sbjct: 73 aactgcaaacggcatttcaac 93
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 atggccgcctccgccgccggcgccg 162 ||||||||||||||||||| ||||| Sbjct: 4712 atggccgcctccgccgccgccgccg 4736
>gb|AC174352.7| Medicago truncatula clone mth2-7o1, complete sequence Length = 121626 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 aaatttatgaaaaactcaaat 777 ||||||||||||||||||||| Sbjct: 120347 aaatttatgaaaaactcaaat 120327
>gb|AC125018.15| Mus musculus chromosome 7, clone RP24-158A20, complete sequence Length = 162317 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 809 aactgcaaacggcatttcaac 829 ||||||||||||||||||||| Sbjct: 24986 aactgcaaacggcatttcaac 24966
>gb|AY022892.1| Oryza sativa microsatellite MRG5217 containing (CGG)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccggcaagtc 169 |||||| ||||||||| |||||||||||| Sbjct: 122 gccgccgccgccgccgccgccggcaagtc 94
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 94413 gccgcctccgccgccggcgcc 94393
>gb|AC167421.2| Mus musculus BAC clone RP23-143K19 from chromosome 3, complete sequence Length = 194311 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 734 taatgctgatctttgatttaatgaa 758 ||||||||||||| ||||||||||| Sbjct: 12157 taatgctgatcttagatttaatgaa 12133
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 gcctccgccgccggcgccggc 164 ||||||||||||||||||||| Sbjct: 144514 gcctccgccgccggcgccggc 144534
>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048K05, complete sequence Length = 104254 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 gcctccgccgccggcgccggc 164 ||||||||||||||||||||| Sbjct: 16675 gcctccgccgccggcgccggc 16695
>gb|AY445034.1| Pan troglodytes cluster of differentiation 2 (CD2) mRNA, partial cds Length = 1035 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 240 ttccttgaaagtctctttctctttt 216
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 cgcctccgccgccggcgccggcaag 167 ||||||||||||||||| ||||||| Sbjct: 107932 cgcctccgccgccggcgacggcaag 107908
>gb|AC137124.17| Mus musculus chromosome 3, clone RP24-229P11, complete sequence Length = 172081 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 734 taatgctgatctttgatttaatgaa 758 ||||||||||||| ||||||||||| Sbjct: 52886 taatgctgatcttagatttaatgaa 52910
>ref|NM_001767.2| Homo sapiens CD2 molecule (CD2), mRNA gb|BC033583.1| Homo sapiens CD2 molecule, mRNA (cDNA clone MGC:34621 IMAGE:5227138), complete cds Length = 1579 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 253 ttccttgaaagtctctttctctttt 229
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 cgcctccgccgccggcgccggcaag 167 ||||||||||||||||| ||||||| Sbjct: 22124 cgcctccgccgccggcgacggcaag 22100
>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence Length = 236510 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 594 ctcttccttggaagtctctttctct 618 ||||| ||||||||||||||||||| Sbjct: 164202 ctcttacttggaagtctctttctct 164226
>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence Length = 126187 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 795 acatgacctacttaaactgca 815 ||||||||||||||||||||| Sbjct: 18980 acatgacctacttaaactgca 19000
>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence Length = 209359 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 594 ctcttccttggaagtctctttctct 618 ||||| ||||||||||||||||||| Sbjct: 26595 ctcttacttggaagtctctttctct 26619
>gb|M19800.1|HUMCD22 Homo sapiens T11 surface antigen (CD2) gene, exon 2 Length = 344 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 197 ttccttgaaagtctctttctctttt 173
>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034K24, complete sequence Length = 142852 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||||||||||||| ||||||| Sbjct: 46512 ggccgcctccgccgccgccgccggc 46488
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 tccgccgccggcgccggcaagtcac 171 |||||||||||||| |||||||||| Sbjct: 1731042 tccgccgccggcgcgggcaagtcac 1731018
>dbj|AK010227.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310079L18 product:RIKEN cDNA 1200003E11 gene, full insert sequence Length = 934 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 ctcccaccctcccccttcccgtcgg 112 |||| |||||||||||||||||||| Sbjct: 18 ctcctaccctcccccttcccgtcgg 42
>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0091J06 from chromosome 10, complete sequence Length = 141911 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||| ||||||||||||||||| Sbjct: 124668 ggccgccgccgccgccggcgccggc 124644
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||| ||||||||||||||||| Sbjct: 15590 ggccgccgccgccgccggcgccggc 15566
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccggcaagtc 169 |||||| ||||||||| |||||||||||| Sbjct: 22705526 gccgccgccgccgccgccgccggcaagtc 22705554
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 8923814 gccgcctccgccgccggcgcc 8923834 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||||||||||||| ||||||| Sbjct: 23340463 ggccgcctccgccgccgccgccggc 23340487
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||| ||||||||||||||||| Sbjct: 11431597 ggccgccgccgccgccggcgccggc 11431573
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccggca 165 |||||||||||||||| |||||||| Sbjct: 4358369 gccgcctccgccgccgccgccggca 4358393
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 gcctccgccgccggcgccggc 164 ||||||||||||||||||||| Sbjct: 24630338 gcctccgccgccggcgccggc 24630358 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 cgcctccgccgccggcgccggcaag 167 ||||||||||||||||| ||||||| Sbjct: 26869692 cgcctccgccgccggcgacggcaag 26869668
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctccgccgccggcgccggcaa 166 ||||||||||||||||||||| Sbjct: 25357772 ctccgccgccggcgccggcaa 25357792 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 atggccgcctccgccgccggcgccg 162 ||||||||||||||||||| ||||| Sbjct: 30838615 atggccgcctccgccgccgccgccg 30838639 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 31283273 gccgcctccgccgccggcgcc 31283253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccg 162 ||||||||||||||||||||| Sbjct: 8881616 ccgcctccgccgccggcgccg 8881636
>dbj|AK223393.1| Homo sapiens mRNA for CD2 antigen (p50), sheep red blood cell receptor variant, clone: FCC107D05 Length = 1550 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 269 ttccttgaaagtctctttctctttt 245
>emb|AL135798.5| Human DNA sequence from clone RP4-655N15 on chromosome 1p13.1-13.3 Contains a neurofilament, heavy polypeptide 200kDa (NEFH) pseudogene, the CD2 gene for CD2 antigen (p50) sheep red blood cell receptor and a ferritin heavy polypeptide 1 (FTH1) pseudogene, complete sequence Length = 103209 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 68152 ttccttgaaagtctctttctctttt 68176
>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12 Contains the PPIAL gene for peptidylprolyl isomerase A (cyclophilin A)-like pseudogene, the 5' end of the PTPRT gene for protein tyrosine phosphatase receptor type T, a novel gene and two CpG Islands, complete sequence Length = 177562 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccctgctcccaccctcccccttccc 107 |||||| |||||||||||||||||| Sbjct: 153885 ccctgcccccaccctcccccttccc 153909
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctccgccgccggcgccggcaa 166 ||||||||||||||||||||| Sbjct: 141711 ctccgccgccggcgccggcaa 141731
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 atggccgcctccgccgccggcgccg 162 ||||||||||||||||||| ||||| Sbjct: 106136 atggccgcctccgccgccgccgccg 106160
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 ctccgccgccggcgccggcaa 166 ||||||||||||||||||||| Sbjct: 84331 ctccgccgccggcgccggcaa 84351
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 104875 gccgcctccgccgccggcgcc 104855
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cccgatggccgcctccgccgc 154 ||||||||||||||||||||| Sbjct: 741144 cccgatggccgcctccgccgc 741124
>gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome 16, complete sequence Length = 256130 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 809 aactgcaaacggcatttcaac 829 ||||||||||||||||||||| Sbjct: 191707 aactgcaaacggcatttcaac 191687
>emb|CR608242.1| full-length cDNA clone CS0CAP005YO07 of Thymus of Homo sapiens (human) Length = 1488 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 253 ttccttgaaagtctctttctctttt 229
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 138 atggccgcctccgccgccggcgccg 162 |||||||| |||||||||||||||| Sbjct: 82410 atggccgcgtccgccgccggcgccg 82386
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 138 atggccgcctccgccgccggcgccg 162 |||||||| |||||||||||||||| Sbjct: 23087 atggccgcgtccgccgccggcgccg 23063
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccggca 165 |||||||||||||||| |||||||| Sbjct: 179423 gccgcctccgccgccgccgccggca 179447
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ccgcctccgccgccggcgccg 162 ||||||||||||||||||||| Sbjct: 86634 ccgcctccgccgccggcgccg 86654
>dbj|AK120965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040E06, full insert sequence Length = 2486 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||||||||||||| ||||||| Sbjct: 1748 ggccgcctccgccgccgccgccggc 1772
>dbj|AK107521.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F09, full insert sequence Length = 1750 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgcc 161 ||||||||||||||||||||| Sbjct: 1492 gccgcctccgccgccggcgcc 1472
>dbj|AK105946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C05, full insert sequence Length = 1367 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 cgcctccgccgccggcgccggcaag 167 ||||||||||||||||| ||||||| Sbjct: 882 cgcctccgccgccggcgacggcaag 906
>dbj|AK071432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092D01, full insert sequence Length = 2488 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ctccgccgccggcgccggcaa 166 ||||||||||||||||||||| Sbjct: 608 ctccgccgccggcgccggcaa 588
>gb|AY890622.1| Synthetic construct Homo sapiens clone FLH120008.01X CD2 antigen (CD2) mRNA, complete cds Length = 1056 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 240 ttccttgaaagtctctttctctttt 216
>emb|X07871.1|HSCD2G1 H.sapiens CD2 gene exons 1 and 2 (and joined CDS) Length = 704 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 541 ttccttgaaagtctctttctctttt 517
>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence Length = 77605 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 140 ggccgcctccgccgccggcgccggc 164 ||||||||||||||||| ||||||| Sbjct: 39197 ggccgcctccgccgccgccgccggc 39173
>ref|XM_723646.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07776) partial mRNA Length = 1515 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 cccgatggccgcctccgccgc 154 ||||||||||||||||||||| Sbjct: 1418 cccgatggccgcctccgccgc 1398
>emb|AL928745.3|CNS08CBI Oryza sativa chromosome 12, . BAC OSJNBb0092G12 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131603 Score = 42.1 bits (21), Expect = 3.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 gccgcctccgccgccggcgccggcaagtc 169 |||||| ||||||||| |||||||||||| Sbjct: 17376 gccgccgccgccgccgccgccggcaagtc 17404
>emb|AJ293561.1|SHY293561 Saccharum hybrid cultivar microsatellite DNA, clone mSSCIR75 Length = 465 Score = 42.1 bits (21), Expect = 3.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 130 gtcccccgatggccgcctccgccgccggcgccg 162 |||| |||||||||||| ||||||||| ||||| Sbjct: 123 gtccgccgatggccgccgccgccgccgccgccg 91
>gb|M16336.1|HUMCD2A Human T-cell surface antigen CD2 (T11) mRNA, complete cds, clone PB1 Length = 1522 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 263 ttccttgaaagtctctttctctttt 239
>gb|M16445.1|HUMANTCD2 Human surface antigen CD2 mRNA, complete cds Length = 1504 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 246 ttccttgaaagtctctttctctttt 222
>dbj|AB053475.1| Oryza sativa gene for RISBZ1, complete cds Length = 4442 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccggca 165 |||||||||||||||| |||||||| Sbjct: 456 gccgcctccgccgccgccgccggca 432
>dbj|AB053472.1| Oryza sativa mRNA for RISBZ1, complete cds Length = 1768 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 141 gccgcctccgccgccggcgccggca 165 |||||||||||||||| |||||||| Sbjct: 456 gccgcctccgccgccgccgccggca 432
>gb|M14362.1|HUMATCCD2 Human T-cell surface antigen CD2 (T11) mRNA, complete cds Length = 1510 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ttccttggaagtctctttctctttt 621 ||||||| ||||||||||||||||| Sbjct: 249 ttccttgaaagtctctttctctttt 225 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 129,341,528 Number of extensions: 7739776 Number of successful extensions: 315654 Number of sequences better than 10.0: 117 Number of HSP's gapped: 315645 Number of HSP's successfully gapped: 161 Length of query: 866 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 844 Effective length of database: 18,508,616,841 Effective search space: 15621272613804 Effective search space used: 15621272613804 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)