| Clone Name | FLbaf148j03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099999:Os03g0349000 | 892 | 0.0 | 2 | AK110127: | 77 | 5e-14 | 3 | Os05g0521800:Os05g0521800 | 30 | 7.5 | 4 | Os04g0643200:Os04g0643200 | 30 | 9.7 | 5 | AK063489:Os01g0357400 | 30 | 9.7 |
|---|
>AK099999:Os03g0349000 | Length = 870 Score = 892 bits (2306), Expect(2) = 0.0 Identities = 440/503 (87%), Positives = 467/503 (92%) Frame = +1 Query: 832 ATGSKSVTMQKVWHLIQALVGEGSSHRNVSRKMSLVVGARQHLEWGYEKYIIETINSQPA 1011 A G+KSVTM KVWHLIQALVGEGS+HRN+SRKMSLV+GAR+HLEWG+EKYI+ETINS PA Sbjct: 252 AIGTKSVTMHKVWHLIQALVGEGSTHRNISRKMSLVIGARRHLEWGHEKYILETINSHPA 311 Query: 1012 LAALGGSVGNLQKIRAFLRVRLRDHGVLDFDASDLRRQPPVDTTWQQIYFCLRTGYYDEA 1191 LAALGGSVGNLQKIRAFLRVRLRDHGVLDFDA+DLRRQPPVDTTWQQIYFCLRTGYYDEA Sbjct: 312 LAALGGSVGNLQKIRAFLRVRLRDHGVLDFDATDLRRQPPVDTTWQQIYFCLRTGYYDEA 371 Query: 1192 RQVAQSSRAAYNFAPLLAEWITTNGAVSSETALTASEECEKMLRMGDRPGRPGYDRKKLL 1371 RQVAQSSRAA+NFAPLL EWITTNGAVS ETALTASEEC+KMLRMGDRPGRPGYDRKKLL Sbjct: 372 RQVAQSSRAAFNFAPLLVEWITTNGAVSPETALTASEECDKMLRMGDRPGRPGYDRKKLL 431 Query: 1372 LYAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYXXXXXXXXXXEGLVPYTLED 1551 LYA+ICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREY EGLVPYTLED Sbjct: 432 LYAMICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYTSASSSNVSNEGLVPYTLED 491 Query: 1552 LQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQSLPAILYLSKEVGEEGYHVDAVHISITL 1731 LQ+YLNKFEPSYYTK+GKDPLVYPY+LLLSIQ LPAILYLSKEVGEEGYHVDAVHISI L Sbjct: 492 LQSYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAILYLSKEVGEEGYHVDAVHISIAL 551 Query: 1732 ADHGILPEGVGSGQKMGVMDACAEAASIIRQYGSVYLRNGNLDXXXXXXXXXXXXMGGGE 1911 +DHG+LP+GVGSGQKMG+MDACAEAASIIRQYGS+YLRNGNLD MGGGE Sbjct: 552 SDHGVLPDGVGSGQKMGIMDACAEAASIIRQYGSIYLRNGNLDLALEYYAQSAAAMGGGE 611 Query: 1912 VSWIGQGNADQQRQRSSMLKQLLTEILLRDGGIQLLLGPSGMGEEGELKKYMMDWRSRQQ 2091 VSWIG+GNADQQRQR+ MLKQLLTEILLRDGGIQLLLGPSGMGEEGELKKYMMDWRSRQQ Sbjct: 612 VSWIGRGNADQQRQRNLMLKQLLTEILLRDGGIQLLLGPSGMGEEGELKKYMMDWRSRQQ 671 Query: 2092 FLLEAAHRCQEAGLYDKSVEIHKRVGAFAMALQTVNKCLSDAVCALAHNMLDGESRAVGL 2271 FLLEAAH+C EAGLYDKSVEIHKRVGAFAMALQT+NKCLSDA+CA+A +MLDGESRA L Sbjct: 672 FLLEAAHQCHEAGLYDKSVEIHKRVGAFAMALQTINKCLSDAICAMARSMLDGESRAAAL 731 Query: 2272 IQSGNEILETARYSSEASVQDKD 2340 I SGNEI+ETARY SEASVQDKD Sbjct: 732 IHSGNEIMETARY-SEASVQDKD 753 Score = 371 bits (952), Expect(2) = 0.0 Identities = 196/232 (84%), Positives = 207/232 (89%), Gaps = 1/232 (0%) Frame = +3 Query: 135 WSELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATRLLAR 314 WSELL++STKLLEQAA TPHFP LQRNLDQLEVLSTKLKAKT+RAEAP QSLSATRLLAR Sbjct: 19 WSELLHSSTKLLEQAAPTPHFPPLQRNLDQLEVLSTKLKAKTVRAEAPVQSLSATRLLAR 78 Query: 315 EGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSFN 494 EGINAEQL RDLKSFELKTTFEDVFPSEAT+VEEYLQQLHEMAIVSSIQ AQKDNL+SFN Sbjct: 79 EGINAEQLARDLKSFELKTTFEDVFPSEATTVEEYLQQLHEMAIVSSIQEAQKDNLRSFN 138 Query: 495 NYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNL-AGGLSRHALMXXXXXXXXXXXXXX 671 NYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNL A G+SR ALM Sbjct: 139 NYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNLMASGISRPALMPSSASSPQSSSGLP 198 Query: 672 XEEVMPIPNKTIIDSKSSVYAGVVKDLNDARGRSLPFSPATAFRAAYESLSL 827 +EVMPIPNKTII++KSSVYA VV+DLNDARGRSLPF PATAFRAAYESLS+ Sbjct: 199 SKEVMPIPNKTIIENKSSVYAAVVRDLNDARGRSLPFGPATAFRAAYESLSV 250 Score = 227 bits (579), Expect = 3e-59 Identities = 112/117 (95%), Positives = 116/117 (99%) Frame = +2 Query: 2339 IISEQQIVLRQLEAILHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPH 2518 +ISEQQ VLRQLEAILHIYRLARAGQT+DALRETIKLPFLHLDPQ+PNV+VDVFRNLSPH Sbjct: 754 LISEQQTVLRQLEAILHIYRLARAGQTLDALRETIKLPFLHLDPQAPNVTVDVFRNLSPH 813 Query: 2519 VQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQCI 2689 VQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQCI Sbjct: 814 VQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQCI 870
>AK110127: | Length = 777 Score = 77.4 bits (189), Expect = 5e-14 Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%) Frame = +3 Query: 138 SELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQS-LSATRLLAR 314 SELL S KL + P +Q LDQ+E S KL +K++R+ + + A LA Sbjct: 14 SELLQQSKKLTNHLGRSD-LPQIQLGLDQIENQSRKLVSKSLRSGSTQPADARAHYFLAN 72 Query: 315 EGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSFN 494 GI+A QL + + +TFE + P T VE YL H+ ++S+I+ +++ L+ F+ Sbjct: 73 GGIDAAQLADTTNAANIASTFEPLQPIYDTDVESYLTHEHQQVVISAIEQGRRETLQDFH 132 Query: 495 NYMMQVLEDDWQKEKRDFLQSLSR 566 + + + DW+++KR + L + Sbjct: 133 RNLDRTMHRDWERQKRKIFEELGQ 156 Score = 55.1 bits (131), Expect = 3e-07 Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 4/159 (2%) Frame = +1 Query: 1351 YDRKKLLLYAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALRE-YXXXXXXXXXXEG 1527 +D KL LY +I +ID K L ++I+++LW +LS +RE Y Sbjct: 304 HDPYKLGLYKLI----GRIDVAKKYPALLTSSIQNWLWLQLSMVRETYDEDADAQDSVRD 359 Query: 1528 LVPYTLEDLQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQSLPAILYLSKEVGEEGYHVD 1707 +TL DL + + KF +Y+ G PL Y +LLL Q A+ +L + VD Sbjct: 360 R--FTLADLGHKVEKFGEAYFDPKGNRPLFYFRLLLLCGQFEKAVGFL---FSRSAHQVD 414 Query: 1708 AVHISITLADHGIL--PEGVGSGQ-KMGVMDACAEAASI 1815 A+H + LA +G+L P S Q + V+++ A+ S+ Sbjct: 415 AIHFGVVLAYYGLLRVPSQAASSQVEYLVVESDAQGGSV 453
>Os05g0521800:Os05g0521800 | Length = 657 Score = 30.4 bits (67), Expect = 7.5 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +3 Query: 315 EGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQL-HEMAIVSSI--QGAQKDNLK 485 + ++ + TRDL E+V+ EAT+++E +++ S I GA++D L Sbjct: 198 KAVSRQTSTRDL---------ENVYHKEATALKELFSTCTFSVSVTSDIWSSGAREDYL- 247 Query: 486 SFNNYMMQVLEDDWQKEKR 542 + ++ ++DDWQ +KR Sbjct: 248 ---SVVVHFVDDDWQLQKR 263
>Os04g0643200:Os04g0643200 | Length = 536 Score = 30.0 bits (66), Expect = 9.7 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 1741 GILPEGVGSGQKMGVMDACAEAASIIRQYGSV 1836 GI+ E +G G + GV+ + +AAS + Q GSV Sbjct: 313 GIIQETLGEGVETGVISSIKDAASHLEQLGSV 344
>AK063489:Os01g0357400 | Length = 348 Score = 30.0 bits (66), Expect = 9.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 321 SPRAPATWWRRATVTAPRRGSSWP 250 SPRA W+R+T P R S WP Sbjct: 192 SPRATPPTWQRSTSMPPSRASPWP 215 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 86,241,220 Number of extensions: 2012699 Number of successful extensions: 5283 Number of sequences better than 10.0: 5 Number of HSP's gapped: 5274 Number of HSP's successfully gapped: 8 Length of query: 985 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 875 Effective length of database: 10,995,345 Effective search space: 9620926875 Effective search space used: 9620926875 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)