ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf148j03 |
|---|---|
| Clone Library Name | barley_pub |
>O22224:Y2162_ARATH Uncharacterized protein At2g41620 - Arabidopsis thaliana (Mouse-ear| cress) Length = 861 Score = 669 bits (1726), Expect(3) = 0.0 Identities = 322/503 (64%), Positives = 408/503 (81%), Gaps = 1/503 (0%) Frame = +1 Query: 835 TGSKSVTMQKVWHLIQALVGEGSSHRN-VSRKMSLVVGARQHLEWGYEKYIIETINSQPA 1011 T KSV MQK+W L+QA+ GE S+ R VS++M+L +GAR HL+ G+EK+I++TI + P Sbjct: 242 TRGKSVNMQKIWQLVQAITGEDSAVRQGVSKRMALAIGARHHLQHGHEKFIMDTIQTHPT 301 Query: 1012 LAALGGSVGNLQKIRAFLRVRLRDHGVLDFDASDLRRQPPVDTTWQQIYFCLRTGYYDEA 1191 AALGGSVGNLQ+IRAFLR+RLRD+GVLDFD++D RRQPPVDTTWQQIYFCLRTGYY+EA Sbjct: 302 QAALGGSVGNLQRIRAFLRIRLRDYGVLDFDSTDARRQPPVDTTWQQIYFCLRTGYYEEA 361 Query: 1192 RQVAQSSRAAYNFAPLLAEWITTNGAVSSETALTASEECEKMLRMGDRPGRPGYDRKKLL 1371 R++A+S+R++ FAPLL EWITT+G V++E+A ASEECEKMLRMGDR GR YD+KKLL Sbjct: 362 REIARSTRSSQQFAPLLTEWITTDGMVAAESAAIASEECEKMLRMGDRLGRTAYDKKKLL 421 Query: 1372 LYAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYXXXXXXXXXXEGLVPYTLED 1551 LY II G RRQI+R+L+DL TLFNTIEDFLWFKLS +R+ +GL PY+L+D Sbjct: 422 LYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLSCIRDVTGGSSSVVLNDGLAPYSLDD 481 Query: 1552 LQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQSLPAILYLSKEVGEEGYHVDAVHISITL 1731 LQ YLNKFEPSYYTK+GKDPLVYPY+LLLS+Q LPAI++LSKE G+ GY++DAVHI+I+L Sbjct: 482 LQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQLLPAIMHLSKEAGDGGYNIDAVHIAISL 541 Query: 1732 ADHGILPEGVGSGQKMGVMDACAEAASIIRQYGSVYLRNGNLDXXXXXXXXXXXXMGGGE 1911 DH +L EG G+G K+ VMD+ AEA+S+IRQYGS++L +G+L +GGG+ Sbjct: 542 VDHSVLSEGSGTGHKLSVMDSNAEASSMIRQYGSMFLHHGDLQMTVEYYAQAAATVGGGQ 601 Query: 1912 VSWIGQGNADQQRQRSSMLKQLLTEILLRDGGIQLLLGPSGMGEEGELKKYMMDWRSRQQ 2091 ++W G+ N DQQRQR+ MLKQLLTEILLR+ GI LLG G GEEG+L ++ D R RQQ Sbjct: 602 LAWSGRSNVDQQRQRNLMLKQLLTEILLRERGIYFLLGARGSGEEGQLGRFFPDSRLRQQ 661 Query: 2092 FLLEAAHRCQEAGLYDKSVEIHKRVGAFAMALQTVNKCLSDAVCALAHNMLDGESRAVGL 2271 FL+EAAH+CQEAGLYDKS+E+ KRVGAF+ AL+T+NKCLS+A+C+LA LDGESR GL Sbjct: 662 FLVEAAHQCQEAGLYDKSIELQKRVGAFSAALETINKCLSEAICSLARGRLDGESRTSGL 721 Query: 2272 IQSGNEILETARYSSEASVQDKD 2340 I +GN+ILET +Y E S+Q+++ Sbjct: 722 ILAGNDILETYKYYPEVSLQERE 744 Score = 273 bits (698), Expect(3) = 0.0 Identities = 144/232 (62%), Positives = 177/232 (76%) Frame = +3 Query: 135 WSELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATRLLAR 314 W++LL++S+KLLEQAA + FP LQRNLDQLE LS KLKAKT+R EAPSQS++ATRLLAR Sbjct: 10 WTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQSIAATRLLAR 69 Query: 315 EGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSFN 494 EGINAEQL RDLKSFELKTTFEDVFP+EATSVEEYLQQ+HEMA+VS+IQ AQKDN++SFN Sbjct: 70 EGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEAQKDNVRSFN 129 Query: 495 NYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNLAGGLSRHALMXXXXXXXXXXXXXXX 674 +YMM+VLE+DW+KEKRDFLQSLSR+S LPK N + HA Sbjct: 130 DYMMKVLEEDWRKEKRDFLQSLSRISMLPKTNM-IDTSREAHAGQLVPVGSSPRVSSTPG 188 Query: 675 EEVMPIPNKTIIDSKSSVYAGVVKDLNDARGRSLPFSPATAFRAAYESLSLD 830 +E++ + N I + K+ VY VVK LN +R R +PF PA F+ AY++L + Sbjct: 189 KELVALANIPIHEKKAYVYGEVVKKLNTSRERGMPFRPAMCFKDAYDTLGAE 240 Score = 155 bits (391), Expect(3) = 0.0 Identities = 71/114 (62%), Positives = 93/114 (81%) Frame = +2 Query: 2342 ISEQQIVLRQLEAILHIYRLARAGQTVDALRETIKLPFLHLDPQSPNVSVDVFRNLSPHV 2521 + EQ+ +LR+LEAIL I++L R G +DALRE KLPFLHLDP+ P+ + DVF++ SP+ Sbjct: 746 VMEQETILRELEAILSIHKLGRLGNHLDALREIAKLPFLHLDPRMPDATADVFQSASPYF 805 Query: 2522 QACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSRNWPQDLYQKVAQ 2683 Q CVPDLLKVAL C+DNV DTDG++RA++SKIA +ASN RNWP+DLY+KVA+ Sbjct: 806 QTCVPDLLKVALTCLDNVPDTDGSIRAMRSKIAGFLASNTHRNWPRDLYEKVAR 859
>O94418:MUG87_SCHPO Meiotically up-regulated gene 87 protein - Schizosaccharomyces pombe| (Fission yeast) Length = 851 Score = 81.6 bits (200), Expect = 2e-14 Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 6/274 (2%) Frame = +1 Query: 946 ARQHLEWGYEKYIIETINSQPALAALGGSVGNLQKIRAFLRVRLRDHGVLDFDASDLRRQ 1125 +R+ LE + + + + I P A +GG KIRA+L +RL +GV ++ + Sbjct: 264 SRKFLEAQFFEVLNKEIAKTPQAALVGGVPSIRNKIRAYLNIRLLRNGVWINPDLEIIQD 323 Query: 1126 PPVDTTWQQIYFCLRTGYYDEARQVAQSSRAAYN-FAPLLAEWITT-----NGAVSSETA 1287 P+ W I++ LR G+ EA + +R + A +I NG + + Sbjct: 324 VPI---WAFIFYLLRCGFLKEAVDFTEENRDLFEKVAEKFPFYINAYAKAPNGILPRQLR 380 Query: 1288 LTASEECEKMLRMGDRPGRPGYDRKKLLLYAIICGCRRQIDRLLKDLPTLFNTIEDFLWF 1467 E + +R+ + D K +Y II C D P++ + ED++WF Sbjct: 381 SQLFSEFNQTIRLQESS-----DPYKYAVYKIIGRC----DLSKTSCPSICSVTEDYIWF 431 Query: 1468 KLSALREYXXXXXXXXXXEGLVPYTLEDLQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQ 1647 +L RE+ ++LED+Q+ L + Y+T +G +P++Y ++L+L Sbjct: 432 QLILSREFTEKSVSAHEF-----FSLEDVQHILLSYGSDYFTNNGSNPVMYFFLLMLCGL 486 Query: 1648 SLPAILYLSKEVGEEGYHVDAVHISITLADHGIL 1749 AI +L + DAVH +IT A +G+L Sbjct: 487 YERAINFLYPY-----FPTDAVHFAITCAYYGLL 515 Score = 45.4 bits (106), Expect = 0.001 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 3/133 (2%) Frame = +3 Query: 147 LNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATR---LLARE 317 L+ ++ L L P P +Q NL ++E +AK P+ T+ LLA Sbjct: 18 LDQKSRKLANELLEPCLPFIQFNLGEIEQ-----RAKHYLNTVPTSKDGNTKAHYLLAGS 72 Query: 318 GINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSFNN 497 GINAEQ + ++S L+ T V+ +L+ E +++S++ ++ +F+ Sbjct: 73 GINAEQTWKKIESLSLQVRPPTTLELSFTDVDMFLKYHREKNVLNSLEALVQNTQIAFDQ 132 Query: 498 YMMQVLEDDWQKE 536 Y LE++W+ + Sbjct: 133 Y----LEEEWRSK 141
>P34077:NIC96_YEAST Nucleoporin NIC96 - Saccharomyces cerevisiae (Baker's yeast)| Length = 839 Score = 51.6 bits (122), Expect(2) = 3e-12 Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 6/307 (1%) Frame = +1 Query: 832 ATGSKSVTMQKVWHLIQALVGEGSSHRNVSRKMSLVVGARQHLEWGYEKYI--IETINSQ 1005 A G+++ + + W +++++ S+ +++V +Q+LE + +Y + N Sbjct: 245 ANGTRNAQLLESWKILESMK---------SKDINIVEVGKQYLEQQFLQYTDNLYKKNMN 295 Query: 1006 PALAALGGSVGNLQKIRAFLRVRLRDHGVLDFDASDLRRQPPVDTTWQQIYFCLRTGYYD 1185 LA N+ KI++F+ +L+ + S+L V W I++ LR G Sbjct: 296 EGLAT------NVNKIKSFIDTKLKKADK-SWKISNLTVINGVPI-WALIFYLLRAGLIK 347 Query: 1186 EARQVAQSSRAAYNFAPLLAEWITTNGAVSSET----ALTASEECEKMLRMGDRPGRPGY 1353 EA QV ++A N + ++T A +S + S + + G Sbjct: 348 EALQVLVENKA--NIKKVEQSFLTYFKAYASSKDHGLPVEYSTKLHTEYNQHIKSSLDG- 404 Query: 1354 DRKKLLLYAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYXXXXXXXXXXEGLV 1533 D +L +Y +I C D K++P + +IED+LW L ++E Sbjct: 405 DPYRLAVYKLIGRC----DLSRKNIPAVTLSIEDWLWMHLMLIKEKDAENDPVYER---- 456 Query: 1534 PYTLEDLQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQSLPAILYLSKEVGEEGYHVDAV 1713 Y+LED QN + + PS ++ Y LLLS + L+ + +DAV Sbjct: 457 -YSLEDFQNIIISYGPSRFSN------YYLQTLLLS-----GLYGLAIDYTYTFSEMDAV 504 Query: 1714 HISITLA 1734 H++I LA Sbjct: 505 HLAIGLA 511 Score = 42.7 bits (99), Expect(2) = 3e-12 Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 6/219 (2%) Frame = +3 Query: 162 KLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQS----LSATRLLAREGINA 329 KL E + + P+ L ++V +L+ + + + +++ A LLA G++ Sbjct: 21 KLNELLESSDNLPSASSELGSIQVSINELRRRVFQLRSKNKASKDYTKAHYLLANSGLSF 80 Query: 330 EQLTRDLKSFELKTTFEDVFPS--EATSVEEYLQQLHEMAIVSSIQGAQKDNLKSFNNYM 503 E + +K + E P E+ +E Y++ E I+ SI+ K F+N++ Sbjct: 81 EDVDAFIKDLQTNQFLEPNPPKIIESEELEFYIRTKKEENILMSIEQLLNGATKDFDNFI 140 Query: 504 MQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNLAGGLSRHALMXXXXXXXXXXXXXXXEEV 683 L DW + K + +++ L K+ + +S E Sbjct: 141 NHNLNLDWAQHKNEVMKNFGIL-IQDKKTVDHKKSISSLDPKLPSWGNKGNNILNSNESR 199 Query: 684 MPIPNKTIIDSKSSVYAGVVKDLNDARGRSLPFSPATAF 800 + + I+ K YA +V N++R + F A F Sbjct: 200 LNVNENNILREKFENYARIVFQFNNSRQANGNFDIANEF 238
>Q7ZU29:NUP93_DANRE Nuclear pore complex protein Nup93 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 820 Score = 66.2 bits (160), Expect = 7e-10 Identities = 97/447 (21%), Positives = 180/447 (40%), Gaps = 4/447 (0%) Frame = +1 Query: 904 SHRNVSRKMSLVVGARQHLEWGYEKYIIETINSQPALAALGGSVGNLQKIRAFLRVRLRD 1083 S +V +M+ V A Q LE Y+ Y + T+ A LGG G Q + +FL ++L Sbjct: 245 SRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNIKLPT 304 Query: 1084 HGVLDFDASDLRRQPPVDTTWQQIYFCLRTGYYDEARQVAQSSRAAY-NFAPLLAEWITT 1260 + ++ P W IYFCLR G A QV ++ +F E++ Sbjct: 305 P-LPGRQDGEVEGHP----VWALIYFCLRCGDLSAAMQVVNKAQHQLGDFKIWFQEYMN- 358 Query: 1261 NGAVSSETALTASEECEKMLRMGDRPGRPGYDRKKLLLYAIICGCRRQIDRLLKDLPTLF 1440 S + L+ + E K+ R R D K +Y +I C + + + Sbjct: 359 ----SPDRRLSPATE-NKLRLHYRRVLRNSADPYKRAVYCLIGKC-----DIGDNHGEVA 408 Query: 1441 NTIEDFLWFKLSALREYXXXXXXXXXXEGLVPYTLEDLQNYLNKFEPSYYTKSGKDPLVY 1620 + ED+LW KL+ + TL LQ L + + + P +Y Sbjct: 409 DKTEDYLWLKLNQV-----CFDEDGSSSPQDRMTLAQLQKQLLEDYGESHFSASHQPFLY 463 Query: 1621 PYILLLSIQSLPAILYLSKEVGEEGYHVDAVHISITLADHGILPEGVGSGQKMGVMDACA 1800 +L L+ Q AI +L + E AVH+++ L + +L + SGQ ++ A Sbjct: 464 FQVLFLTAQFEAAIAFLFR---VERLRSHAVHVALVLYELKLLLK--SSGQSAQLLSQEA 518 Query: 1801 EAASIIRQYGSVYLRNGNLDXXXXXXXXXXXXMGGGEVSWIGQGNADQQRQRSSMLKQLL 1980 ++R+ + L + + + D Q + +M + + Sbjct: 519 GDPPMVRRLNFI-----RLLMLYTRKFESTDPREALQYFYFLRNEKDSQGE--NMFMRCV 571 Query: 1981 TEILLRDGGIQLLLG---PSGMGEEGELKKYMMDWRSRQQFLLEAAHRCQEAGLYDKSVE 2151 +E+++ +LLG G + G + K+ D R+ + + A + GL++++V+ Sbjct: 572 SELVIESREFDMLLGRLEKDGSRKPGVIDKFAGDTRA---IITKVASEAENKGLFEEAVK 628 Query: 2152 IHKRVGAFAMALQTVNKCLSDAVCALA 2232 +++ L+ +NK LS + ++ Sbjct: 629 LYELAKNADKVLELMNKLLSPVIAQVS 655 Score = 59.3 bits (142), Expect = 9e-08 Identities = 32/143 (22%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Frame = +3 Query: 135 WSELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTI-RAEAPSQSLSATRLLA 311 + ELL + +L + P ++RNL +++ +L+++T+ R + + A+ LL Sbjct: 6 FGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKASILLG 65 Query: 312 REGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSF 491 G++ +++ L+S TTFE + P + T ++ +L+ + A++S+I+ +++ Sbjct: 66 SRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRRTFLLA 125 Query: 492 NNYMMQVLEDDWQKEKRDFLQSL 560 Y + W++ K+ L +L Sbjct: 126 EEYHRDSMLVQWEQVKQRVLHTL 148
>Q7ZX96:NUP93_XENLA Nuclear pore complex protein Nup93 - Xenopus laevis (African clawed| frog) Length = 820 Score = 64.3 bits (155), Expect = 3e-09 Identities = 35/143 (24%), Positives = 77/143 (53%), Gaps = 1/143 (0%) Frame = +3 Query: 135 WSELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTI-RAEAPSQSLSATRLLA 311 + ELL + +L + P ++RNL +++ +L++KT+ R S ++ A+ LL Sbjct: 6 FGELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKASVLLG 65 Query: 312 REGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSF 491 G++ +++ L+S TTFE + P + T ++ +L+ + A++S+I+ ++K Sbjct: 66 SRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFVMA 125 Query: 492 NNYMMQVLEDDWQKEKRDFLQSL 560 Y + + +W++ K+ L +L Sbjct: 126 EEYHRESMLVEWEQVKQRVLHTL 148 Score = 60.5 bits (145), Expect = 4e-08 Identities = 93/442 (21%), Positives = 167/442 (37%), Gaps = 6/442 (1%) Frame = +1 Query: 925 KMSLVVGARQHLEWGYEKYIIETINSQPALAALGGSVGNLQKIRAFLRVRLRDHGVLDFD 1104 +M+ V A +LE Y+ Y + ++ + A LGG G +R+FL +RL + Sbjct: 252 QMAFVRQALNYLEQSYKNYTLISVFANLQQAQLGGVPGTYNLVRSFLNIRL-PTPIPGLQ 310 Query: 1105 ASDLRRQPPVDTTWQQIYFCLRTGYYDEARQVA-QSSRAAYNFAPLLAEWITTNGAVSSE 1281 ++ P W IY+C+R G A+QV ++ +F E+I S Sbjct: 311 DGEIEGYP----VWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYIHNKDRRLSP 366 Query: 1282 TALTASEECEKMLRMGDRPG-RPGYDRKKLLLYAIICGCRRQIDRLLKDLPTLFNTIEDF 1458 T E LR+ R R D K +Y II C + + + + ED+ Sbjct: 367 TT-------ENKLRLHYRRAVRASTDPYKRAVYCIIGRC-----DVSDNHSEVADKTEDY 414 Query: 1459 LWFKLSALREYXXXXXXXXXXEGLVPYTLEDLQNYLNKFEPSYYTKSGKDPLVYPYILLL 1638 LW KLS + TL Q L + + + P +Y +L L Sbjct: 415 LWLKLSQV-----CFEDEANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFL 469 Query: 1639 SIQSLPAILYLSKEVGEEGYHVDAVHISITLADHGILPEGVG-SGQKMGVMDACAEAASI 1815 + Q AI +L + E AVH+++ L + +L + G S Q + + Sbjct: 470 TAQFEAAIAFLFR---LERTRCHAVHVALALFELKLLLKSTGQSAQLLSQEPGEPQGVRR 526 Query: 1816 IRQYGSVYLRNGNLDXXXXXXXXXXXXMGGGEVSWIGQGNADQQRQRSSMLKQLLTEILL 1995 + + L + E + Q SM + ++E+++ Sbjct: 527 LNFIRLLMLYTRKFEPTDPREALQYFYFLRNE----------KDNQGESMFLRCVSELVI 576 Query: 1996 RDGGIQLLLG---PSGMGEEGELKKYMMDWRSRQQFLLEAAHRCQEAGLYDKSVEIHKRV 2166 +LLG G + G + K+ D ++ + + A + GL++++ +++ Sbjct: 577 ESREFDMLLGKLEKDGSRKPGAIDKFTRDTKT---IINKVASVAENKGLFEEAAKLYDLA 633 Query: 2167 GAFAMALQTVNKCLSDAVCALA 2232 L+ NK LS V ++ Sbjct: 634 KNPDKVLELTNKLLSPVVSQIS 655
>Q8BJ71:NUP93_MOUSE Nuclear pore complex protein Nup93 - Mus musculus (Mouse)| Length = 819 Score = 64.3 bits (155), Expect = 3e-09 Identities = 99/451 (21%), Positives = 180/451 (39%), Gaps = 12/451 (2%) Frame = +1 Query: 904 SHRNVSRKMSLVVGARQHLEWGYEKYIIETINSQPALAALGGSVGNLQKIRAFLRVRL-- 1077 S +V +M V A +LE Y+ Y + T+ A LGG G Q +R+FL ++L Sbjct: 244 SRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPA 303 Query: 1078 RDHGVLDFDASDLRRQPPVDTTWQQIYFCLRTGYYDEARQVAQSSRAAYNFAPLLAEWIT 1257 G+ D ++ P W IY+C+R G A QV SRA + L E+ T Sbjct: 304 PSPGLQD---GEVEGHP----VWALIYYCMRCGDLLAASQVV--SRAQHQ----LGEFKT 350 Query: 1258 TNGAVSSETALTASEECEKMLRMGDRPG-RPGYDRKKLLLYAIICGCRRQIDRLLKDLPT 1434 + S E LR+ R R D K +Y II C + + Sbjct: 351 WFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRC-----DITDNQSE 405 Query: 1435 LFNTIEDFLWFKLSALREYXXXXXXXXXXEGLVPYTLEDLQNYLNKFEPSYYTKSGKDPL 1614 + + ED+LW KL+ + L + + L++Y S++T + + P Sbjct: 406 VADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDY----GESHFTVN-QQPF 460 Query: 1615 VYPYILLLSIQSLPAILYLSKEVGEEGYHVDAVHISITLADHGILPEGVGSGQKMGVMD- 1791 +Y +L L+ Q AI +L + E AVH+++ L + +L + SGQ ++ Sbjct: 461 LYFQVLFLTAQFEAAIAFLFR---MERLRCHAVHVALVLFELKLLLK--SSGQSAQLLSH 515 Query: 1792 -----ACAEAASIIRQYGSVYLRNGNLDXXXXXXXXXXXXMGGGEVSWIGQGNADQQRQR 1956 C + +R + + D + + ++ Q Sbjct: 516 EPGDPPCMRRLNFVRLLMLYTRKFESTDPRE-------------ALQYFYFLRDEKDSQG 562 Query: 1957 SSMLKQLLTEILLRDGGIQLLLGP---SGMGEEGELKKYMMDWRSRQQFLLEAAHRCQEA 2127 +M + ++E+++ ++LG G + G + K+ D + + + A + Sbjct: 563 ENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSD---TKPIINKVASVAENK 619 Query: 2128 GLYDKSVEIHKRVGAFAMALQTVNKCLSDAV 2220 GL++++ +++ L+ +NK LS V Sbjct: 620 GLFEEAAKLYDLAKNADKVLELMNKLLSPVV 650 Score = 62.0 bits (149), Expect = 1e-08 Identities = 33/143 (23%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Frame = +3 Query: 135 WSELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTI-RAEAPSQSLSATRLLA 311 + ELL + +L + P ++RNL +++ +L+++T+ R + + A+ LL Sbjct: 6 FGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLG 65 Query: 312 REGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSF 491 G++ +++ L+S TTFE + P + T ++ +L+ + A++S+I+ ++K Sbjct: 66 SRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMA 125 Query: 492 NNYMMQVLEDDWQKEKRDFLQSL 560 Y + + +W++ K+ L +L Sbjct: 126 EEYHRESMLVEWEQVKQRILHTL 148
>Q8N1F7:NUP93_HUMAN Nuclear pore complex protein Nup93 - Homo sapiens (Human)| Length = 819 Score = 62.0 bits (149), Expect = 1e-08 Identities = 33/143 (23%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Frame = +3 Query: 135 WSELLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTI-RAEAPSQSLSATRLLA 311 + ELL + +L + P ++RNL +++ +L+++T+ R + + A+ LL Sbjct: 6 FGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLG 65 Query: 312 REGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKSF 491 G++ +++ L+S TTFE + P + T ++ +L+ + A++S+I+ ++K Sbjct: 66 SRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMA 125 Query: 492 NNYMMQVLEDDWQKEKRDFLQSL 560 Y + + +W++ K+ L +L Sbjct: 126 EEYHRESMLVEWEQVKQRILHTL 148 Score = 60.5 bits (145), Expect = 4e-08 Identities = 94/446 (21%), Positives = 177/446 (39%), Gaps = 10/446 (2%) Frame = +1 Query: 913 NVSRKMSLVVGARQHLEWGYEKYIIETINSQPALAALGGSVGNLQKIRAFLRVRLRDHGV 1092 +V +M V A +LE Y+ Y + T+ A LGG G Q +R+FL ++L + Sbjct: 247 SVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKL-PAPL 305 Query: 1093 LDFDASDLRRQPPVDTTWQQIYFCLRTGYYDEARQVAQSSRAAYNFAPLLAEWITTNGAV 1272 ++ P W IY+C+R G A QV +RA + L E+ T Sbjct: 306 PGLQDGEVEGHP----VWALIYYCMRCGDLLAASQVV--NRAQHQ----LGEFKTWFQEY 355 Query: 1273 SSETALTASEECEKMLRMGDRPG-RPGYDRKKLLLYAIICGCRRQIDRLLKDLPTLFNTI 1449 + S E LR+ R R D K +Y II C + + + + Sbjct: 356 MNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRC-----DVTDNQSEVADKT 410 Query: 1450 EDFLWFKLSALREYXXXXXXXXXXEGLVPYTLEDLQNYLNKFEPSYYTKSGKDPLVYPYI 1629 ED+LW KL+ + L + + L++Y S++T + + P +Y + Sbjct: 411 EDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDY----GESHFTVN-QQPFLYFQV 465 Query: 1630 LLLSIQSLPAILYLSKEVGEEGYHVDAVHISITLADHGILPEGVGSGQKMGVMD------ 1791 L L+ Q A+ +L + E AVH+++ L + +L + SGQ ++ Sbjct: 466 LFLTAQFEAAVAFLFR---MERLRCHAVHVALVLFELKLLLK--SSGQSAQLLSHEPGDP 520 Query: 1792 ACAEAASIIRQYGSVYLRNGNLDXXXXXXXXXXXXMGGGEVSWIGQGNADQQRQRSSMLK 1971 C + +R + + D + + ++ Q +M Sbjct: 521 PCLRRLNFVRLLMLYTRKFESTDPRE-------------ALQYFYFLRDEKDSQGENMFL 567 Query: 1972 QLLTEILLRDGGIQLLLGP---SGMGEEGELKKYMMDWRSRQQFLLEAAHRCQEAGLYDK 2142 + ++E+++ ++LG G + G + K+ D + + + A + GL+++ Sbjct: 568 RCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSD---TKPIINKVASVAENKGLFEE 624 Query: 2143 SVEIHKRVGAFAMALQTVNKCLSDAV 2220 + +++ L+ +NK LS V Sbjct: 625 AAKLYDLAKNADKVLELMNKLLSPVV 650
>O14310:NP106_SCHPO Nucleoporin npp106 - Schizosaccharomyces pombe (Fission yeast)| Length = 933 Score = 49.7 bits (117), Expect = 7e-05 Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 1/145 (0%) Frame = +3 Query: 183 LTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATRLLAREGINAEQLTRDLKSFE 362 L P P +Q L+QLE + L++K + A LLA G+NAEQ + + S Sbjct: 40 LEPQVPVIQYGLNQLEEKARNLESKVLLTR--DGDTKAHYLLAESGMNAEQTRQKIYSIH 97 Query: 363 LKTTFEDVFPSEATSVEEYLQQLHE-MAIVSSIQGAQKDNLKSFNNYMMQVLEDDWQKEK 539 + + ++ + + + E+ +L+ +V+SI+ + N+ F +M+ W+ K Sbjct: 98 IHSPWDQLELDKKSLYEQPHTKLYNGQNVVASIENGYQSNVYEFQLRLMKNNGIAWENTK 157 Query: 540 RDFLQSLSRLSTLPKRNTNLAGGLS 614 +F++ + +L K N+ L +S Sbjct: 158 TEFMEDVGKL-LHSKDNSGLGTSIS 181 Score = 40.0 bits (92), Expect = 0.056 Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 6/246 (2%) Frame = +1 Query: 1030 SVGNLQKIRAFLRVRLRDHGVLDFDASDLRRQPPVDTTWQQIYFCLRTGYYDEARQVAQS 1209 +V +++K+ A+ ++R +G + P+ W +++ +R+G D A Q + Sbjct: 358 TVNSVEKVIAYSKLRFYKNGSWIKSTVSVVNDVPL---WVVLFYLMRSGQLDAALQFVNT 414 Query: 1210 -----SRAAYNFAPLLAEWITTNGAVSSETALTASEECEKMLRMGDRPGRPGYDRKKLLL 1374 + +F PL N ++ L + E M P P K + Sbjct: 415 YSDDFEKLGRSF-PLYFYSYAKNPSLPLPKQLRDRLQAEYGQLMKYAPEDPF----KHAI 469 Query: 1375 YAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYXXXXXXXXXXEGLVP-YTLED 1551 Y ++ C LP + T ED++W +L R + + L Sbjct: 470 YKLLGNCEPH----RVSLPEVCVTSEDYMWIQLMFCRVNQNDVIDSNGGQSTNSLFNLYQ 525 Query: 1552 LQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQSLPAILYLSKEVGEEGYHVDAVHISITL 1731 L+ + F P Y+ P Y LL+ + AI +L Y V+A H ++ + Sbjct: 526 LEKKIVAFGPRYFNPKNNTPTNYFLALLMCGEFERAISFL-----HTNYPVEATHFAVAM 580 Query: 1732 ADHGIL 1749 A +G+L Sbjct: 581 AYYGLL 586
>Q09857:YAF3_SCHPO Uncharacterized protein C29E6.03c - Schizosaccharomyces pombe| (Fission yeast) Length = 1044 Score = 35.8 bits (81), Expect = 1.1 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 3/148 (2%) Frame = +3 Query: 138 SELLNTSTKLLEQAALTPHFPALQR-NLDQLEVLSTKLKA--KTIRAEAPSQSLSATRLL 308 S++ N T +++ L+R NL ++ LS K K K++R E + + + Sbjct: 567 SDVYNAITSAVKRDVFINRLQRLRRMNLYEITFLSMKQKMQLKSLREEIDNTKEALDLSV 626 Query: 309 AREGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAIVSSIQGAQKDNLKS 488 I E+L LK+ KT E+ EE L ++ + K N K Sbjct: 627 KERSIQEEKLNESLKTS--KTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQ 684 Query: 489 FNNYMMQVLEDDWQKEKRDFLQSLSRLS 572 M QVL + + E +DF++ S+L+ Sbjct: 685 MEEEM-QVLREGHESEIKDFIEEHSKLT 711
>Q91ZU8:BPAEA_MOUSE Bullous pemphigoid antigen 1, isoform 5 - Mus musculus (Mouse)| Length = 2611 Score = 35.8 bits (81), Expect = 1.1 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 12/148 (8%) Frame = +3 Query: 144 LLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATRLLAREGI 323 + N + QAA +P PAL+ +L V+ L + + L L+ + Sbjct: 771 ITNKCEEFFSQAADSPSVPALR---SELSVVIQSLSQIYSMSSTYIEKLKTVNLVLKNTQ 827 Query: 324 NAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEM------------AIVSSIQGA 467 AE L +K +E K E+ ++ ++E + L + A+ +Q A Sbjct: 828 AAEAL---VKLYETKLCEEEAVIADKNNIENLMSTLKQWRSEVDEKREVFHALEDELQKA 884 Query: 468 QKDNLKSFNNYMMQVLEDDWQKEKRDFL 551 + + + F + + L+ DW KEK D L Sbjct: 885 KAISDEMFKTHKERDLDFDWHKEKADQL 912
>Q91ZU6:BPA1_MOUSE Bullous pemphigoid antigen 1, isoforms 1/2/3/4 - Mus musculus (Mouse)| Length = 7389 Score = 35.8 bits (81), Expect = 1.1 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 12/148 (8%) Frame = +3 Query: 144 LLNTSTKLLEQAALTPHFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATRLLAREGI 323 + N + QAA +P PAL+ +L V+ L + + L L+ + Sbjct: 1125 ITNKCEEFFSQAADSPSVPALR---SELSVVIQSLSQIYSMSSTYIEKLKTVNLVLKNTQ 1181 Query: 324 NAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEM------------AIVSSIQGA 467 AE L +K +E K E+ ++ ++E + L + A+ +Q A Sbjct: 1182 AAEAL---VKLYETKLCEEEAVIADKNNIENLMSTLKQWRSEVDEKREVFHALEDELQKA 1238 Query: 468 QKDNLKSFNNYMMQVLEDDWQKEKRDFL 551 + + + F + + L+ DW KEK D L Sbjct: 1239 KAISDEMFKTHKERDLDFDWHKEKADQL 1266
>Q8WXK8:BPAEB_HUMAN Bullous pemphigoid antigen 1, isoform 7 - Homo sapiens (Human)| Length = 3060 Score = 33.1 bits (74), Expect = 6.9 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 21/157 (13%) Frame = +3 Query: 144 LLNTSTKLLEQAALTPHFPALQ-------RNLDQLEVLST----KLKA-----KTIRAEA 275 + N + QAA + P L+ +N++Q+ +S+ KLK K +A Sbjct: 800 ITNKCEEFFSQAAASSSVPTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLGLKNTQAAE 859 Query: 276 PSQSLSATRLLAREGI-----NAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEM 440 L T+L E + N E L LK + + V+E Q H Sbjct: 860 ALVKLYETKLCEEEAVIADKNNIENLISTLKQWR-------------SEVDEKRQVFH-- 904 Query: 441 AIVSSIQGAQKDNLKSFNNYMMQVLEDDWQKEKRDFL 551 A+ +Q A+ + + F Y + L+ DW KEK D L Sbjct: 905 ALEDELQKAKAISDEMFKTYKERDLDFDWHKEKADQL 941
>O94833:BPAEA_HUMAN Bullous pemphigoid antigen 1, isoforms 6/9/10 - Homo sapiens (Human)| Length = 5171 Score = 33.1 bits (74), Expect = 6.9 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 21/157 (13%) Frame = +3 Query: 144 LLNTSTKLLEQAALTPHFPALQ-------RNLDQLEVLST----KLKA-----KTIRAEA 275 + N + QAA + P L+ +N++Q+ +S+ KLK K +A Sbjct: 800 ITNKCEEFFSQAAASSSVPTLRSELNVVLQNMNQVYSMSSTYIDKLKTVNLGLKNTQAAE 859 Query: 276 PSQSLSATRLLAREGI-----NAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEM 440 L T+L E + N E L LK + + V+E Q H Sbjct: 860 ALVKLYETKLCEEEAVIADKNNIENLISTLKQWR-------------SEVDEKRQVFH-- 904 Query: 441 AIVSSIQGAQKDNLKSFNNYMMQVLEDDWQKEKRDFL 551 A+ +Q A+ + + F Y + L+ DW KEK D L Sbjct: 905 ALEDELQKAKAISDEMFKTYKERDLDFDWHKEKADQL 941
>Q59279:ARGC_CORGL N-acetyl-gamma-glutamyl-phosphate reductase - Corynebacterium| glutamicum (Brevibacterium flavum) Length = 347 Score = 33.1 bits (74), Expect = 6.9 Identities = 19/70 (27%), Positives = 30/70 (42%) Frame = +3 Query: 192 HFPALQRNLDQLEVLSTKLKAKTIRAEAPSQSLSATRLLAREGINAEQLTRDLKSFELKT 371 H P + +NL ++ K+ + A P L+ +EG+ AEQ + F + Sbjct: 212 HTPEIAQNLGEVSDKPVKVSFTPVLAPLPRGILTTATAPLKEGVTAEQARAVYEEFYAQE 271 Query: 372 TFEDVFPSEA 401 TF V P A Sbjct: 272 TFVHVLPEGA 281 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 524,526,813 Number of extensions: 11804523 Number of successful extensions: 30286 Number of sequences better than 10.0: 14 Number of HSP's gapped: 30260 Number of HSP's successfully gapped: 24 Length of query: 985 Length of database: 100,686,439 Length adjustment: 123 Effective length of query: 862 Effective length of database: 66,948,154 Effective search space: 57709308748 Effective search space used: 57709308748 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
