ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf148j03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056641.1| Oryza sativa (japonica cultivar-group) Os03g0349000 (Os03g0349000) mRNA, complete cds Length = 3072 Score = 2825 bits (1425), Expect = 0.0 Identities = 2291/2576 (88%), Gaps = 9/2576 (0%) Strand = Plus / Plus Query: 122 ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 181 |||||||||||| ||||| ||||| ||| || ||||||| |||||||||||||||||||| Sbjct: 119 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 178 Query: 182 cctcacccctcacttccctgccctccagaggaacctggaccagctcgaggtgctctccac 241 || |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 179 ccccaccccgcacttccctcccctccagaggaacctggaccagctggaggtgctctccac 238 Query: 242 caagctcaaggccaagacgatccgcgccgaggcgccgtcacagtcgctctccgccaccag 301 ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 239 caagctcaaggccaagacggtgcgcgccgaggcgcccgtgcagtcgctctccgccaccag 298 Query: 302 gttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcattcga 361 |||| |||||||||||||||||||||| ||||||||| |||| |||||||| || ||||| Sbjct: 299 gttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatccttcga 358 Query: 362 actcaagaccacctttgaggatgtttttccatcggaagcaacttctgtcgaggaatacct 421 ||| |||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 359 acttaagaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacct 418 Query: 422 gcaacagcttcatgaaatggcaattgtctcatccatccaaggagcacaaaaggacaactt 481 ||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 419 gcagcagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaactt 478 Query: 482 aaagagttttaacaattatatgatgcaagttcttgaggatgactggcagaaggagaagag 541 || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | Sbjct: 479 aaggagttttaacaattatatgatgcaagttctcgaggatgattggcagaaggagaagcg 538 Query: 542 agattttttgcagagtctaagccgactttctacattaccaaagagaaacaccaatcta-- 599 ||| || |||||||||||||||||||| ||||||||||| || |||||||| ||||| Sbjct: 539 agacttcttgcagagtctaagccgactctctacattaccgaaaagaaacactaatctcat 598 Query: 600 -gctggtggtctgtctcgtcatgctctgatgccatcttcagcttccagtcctcaagcttc 658 || |||| | ||||||| |||||||||||||||||||||||||||||| ||| |||| Sbjct: 599 ggccagtgggatttctcgtcctgctctgatgccatcttcagcttccagtccccaatcttc 658 Query: 659 atcagggctgcctgctgaggaagtaatgcccatacctaacaagaccataattgatagtaa 718 || || ||||| || ||||||| ||||||||||||||||| || |||||||| | || Sbjct: 659 gtccggtctgccatctaaggaagtcatgcccatacctaacaaaactataattgaaaacaa 718 Query: 719 atcttcagtttacgcgggggttgtgaaggatctcaacgatgctagaggacgcagtctgcc 778 |||||||||||| || | ||||||| ||||| || ||||||||||| ||||| || || Sbjct: 719 atcttcagtttatgctgcagttgtgagagatcttaatgatgctagagggcgcagcctacc 778 Query: 779 tttcagtcctgctacagctttcagagctgcttacgagtccttgtctcttgattgccactg 838 ||| ||||||||||||| ||||| |||||||| ||||| || ||| ||| | || | || Sbjct: 779 ttttggtcctgctacagcattcagggctgcttatgagtctttatctgttggt-gctattg 837 Query: 839 gctcaaagtcagtgaccatgcagaaagtgtggcacttgattcaggccttagtaggggaag 898 | |||| |||||||||||||| ||||||||||| || |||||||| ||||| ||||||| Sbjct: 838 ggacaaaatcagtgaccatgcataaagtgtggcatttaattcaggcattagttggggaag 897 Query: 899 ggtcttctcatagaaacgtttcaagaaaaatgtcactagtggttggagcaaggcaacacc 958 |||| ||||| ||||| ||||||||||||||||||||||| |||| || || | ||||| Sbjct: 898 ggtcaactcatcgaaacatttcaagaaaaatgtcactagtgattggtgctagacgacacc 957 Query: 959 ttgaatggggttatgagaaatacataattgagaccatcaacagccagccagcactagctg 1018 |||| |||||| |||| || |||||| ||||||||||||| ||||| || || ||||||| Sbjct: 958 ttgagtggggtcatgaaaagtacatacttgagaccatcaatagccatccggctctagctg 1017 Query: 1019 ctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggtccggttga 1078 ||||||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 1018 ctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggtccgtttgc 1077 Query: 1079 gggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagccaccagtggata 1138 |||||||||| ||| ||||||||||||||| |||||| || ||||||||||||||||| | Sbjct: 1078 gggatcatggtgtgctagactttgatgcaactgatctgcgtagacagccaccagtggaca 1137 Query: 1139 caacatggcagcagatttatttctgcttaagaactgggtattatgatgaagcaaggcaag 1198 |||||||||| ||||||||||||||||| ||||| || || |||||||| ||||| |||| Sbjct: 1138 caacatggcaacagatttatttctgcttgagaaccggatactatgatgaggcaagacaag 1197 Query: 1199 ttgctcaatcatctcgtgctgcttacaacttcgcccctctgcttgcagaatggattacta 1258 |||| ||||||||||||||||| | |||||| || || ||||||| |||||||||||||| Sbjct: 1198 ttgcccaatcatctcgtgctgcattcaactttgctcccctgcttgtagaatggattacta 1257 Query: 1259 ctaatggtgctgtgtcatcagagactgctctgacagcttctgaggaatgtgaaaaaatgc 1318 ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1258 ctaatggtgctgtatccccagagactgctctgacagcttctgaggaatgtgacaaaatgc 1317 Query: 1319 tcagaatgggtgaccgaccagggcgtcctggttatgataggaagaagttgcttctttatg 1378 | ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 1318 tgagaatgggtgatcgacctggccgtcctggttatgataggaagaagttgctcctttatg 1377 Query: 1379 ccataatttgtggctgtcgacggcaaattgacagattacttaaagatctgccaacacttt 1438 |||| || ||||| |||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1378 ccatgatctgtggttgtcgacgtcaaatcgacagattgcttaaagatctgccaacacttt 1437 Query: 1439 tcaatactatagaggatttcttgtggttcaagttgtcagctctgcgggaatactccagtg 1498 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 1438 tcaatactatagaggatttcttgtggttcaaattgtcagctctgcgggagtacaccagtg 1497 Query: 1499 catcttcttctaatgttgtgagtgaaggcttggttccttatacgctggaggatttacaaa 1558 ||||||||||||||||| | |||||||||||| |||||||| ||||||||| | |||| Sbjct: 1498 catcttcttctaatgtttcaaatgaaggcttggtgccttatactctggaggatctgcaaa 1557 Query: 1559 attatttgaacaaatttgagccatcatattatacaaaaagtggaaaagatcccttggtct 1618 ||| || ||||||||||| ||||||||||||||||| | ||||||||| |||||||||| Sbjct: 1558 gttacttaaacaaatttgaaccatcatattatacaaagaatggaaaagaccccttggtct 1617 Query: 1619 atccctatattctgctcttaagcatccaatcacttccagcaattctttatttgtctaaag 1678 |||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1618 atccatatgttctgctgttaagcatccaattgcttccagcaattctttatttgtctaaag 1677 Query: 1679 aagttggagaggaaggataccatgttgatgctgtgcatatttcaattactctggccgatc 1738 ||||||||||||||||||||||||| ||||||||||||||||||||| || | | |||| Sbjct: 1678 aagttggagaggaaggataccatgtagatgctgtgcatatttcaattgctttatctgatc 1737 Query: 1739 atggtattctccctgagggagttggatcaggccagaagatgggtgtaatggatgcttgcg 1798 ||||| |||||||||| || ||||| |||||||||||||||||| | ||||||||||| | Sbjct: 1738 atggtgttctccctgatggtgttgggtcaggccagaagatgggtatcatggatgcttgtg 1797 Query: 1799 cagaagctgccagtattatacggcaatatggctctgtttacttgcgcaatggcaaccttg 1858 |||||||||||||||| |||||||| ||||||||| |||| ||||| ||||| ||||||| Sbjct: 1798 cagaagctgccagtataatacggcagtatggctctatttatttgcgtaatggtaaccttg 1857 Query: 1859 atttggccttggagtattatgcacaggctgctgctgcaatgggtggaggagaggtatcat 1918 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1858 atttggccttggagtattatgcacagtctgctgctgcaatgggtggaggagaggtatcat 1917 Query: 1919 ggattggtcaagggaatgctgatcaacaacgtcaacgaagttcaatgttgaagcaactgc 1978 ||||||||| ||||||||||||||| || || || |||| | ||||||||||||||||| Sbjct: 1918 ggattggtcgagggaatgctgatcagcagcggcagcgaaatctaatgttgaagcaactgc 1977 Query: 1979 tcacagagatattactaagggatggtggtattcaacttttgcttggtccaagtggaatgg 2038 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1978 tgacagagatattactaagggatggtggcattcaacttttgcttggtccaagtggaatgg 2037 Query: 2039 gagaagaaggagaactaaaaaagtacatgatggactggagaagtaggcagcaatttttgc 2098 | |||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| || | Sbjct: 2038 gggaagaaggagaattaaagaagtatatgatggattggagaagcaggcagcaattcttac 2097 Query: 2099 ttgaagccgcccatcggtgtcaagaggcagggctctatgacaaatcggtggaaatccaca 2158 ||||||| ||||||| |||||| |||||||| |||||||||||||| |||||||| || | Sbjct: 2098 ttgaagctgcccatcagtgtcatgaggcaggcctctatgacaaatcagtggaaattcata 2157 Query: 2159 aaagagttggagcttttgccatggcacttcagacagtaaacaagtgtttatcggatgcag 2218 ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||| Sbjct: 2158 aaagagttggagcttttgccatggcacttcagacaataaataagtgcctgtcggatgcaa 2217 Query: 2219 tatgtgccctggcacacaatatgttagatggagaaagccgtgctgttggtctaattcaat 2278 |||||||| |||||| || |||||||||||| ||||| ||||||| || ||||||||| | Sbjct: 2218 tatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgctgctctaattcatt 2277 Query: 2279 ctggcaatgaaattttggagacagccagatattcttctgaagccagtgttcaagacaagg 2338 |||| ||||||||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 2278 ctggtaatgaaattatggaaactgccagata---ttcggaagccagtgttcaagacaagg 2334 Query: 2339 a--tcatttctgaacagcaaattgtactgagacagcttgaagctattcttcacatttata 2396 | |||| ||||| || |||| ||||||||||||||||||||||||||| || || |||| Sbjct: 2335 acctcatatctgagcaacaaactgtactgagacagcttgaagctattctccatatctata 2394 Query: 2397 ggctagctcgtgctggacaaactgttgacgctctgagggaaaccatcaaacttccatttc 2456 |||| ||||| |||||||| ||| | || ||| ||||||||||||||||||| ||||||| Sbjct: 2395 ggcttgctcgagctggacagactttagatgctttgagggaaaccatcaaactcccatttc 2454 Query: 2457 ttcatttggatccacagtctccgaatgtatcagtcgatgtattcaggaatttatcacccc 2516 ||||||||||||| ||| |||| ||||| |||| ||||| ||||| || || ||||| | Sbjct: 2455 ttcatttggatcctcaggctccaaatgtgacagttgatgtgttcagaaacttgtcaccgc 2514 Query: 2517 atgttcaagcttgtgtgccagatctcctgaaggttgctctaaactgcatggacaatgtta 2576 |||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 2515 atgttcaagcttgtgtgccagatctcttgaaggttgctctaaattgtatggacaatgtta 2574 Query: 2577 gagataccgatgggaccctgcgtgctgtcaagtcaaagattgcgaaccttgtggcaagca 2636 ||||||| ||||||||| ||||||| |||||||||||||| || ||||| |||||||||| Sbjct: 2575 gagatactgatgggaccttgcgtgcagtcaagtcaaagatcgcaaacctcgtggcaagca 2634 Query: 2637 acatgagcaggaattggccacaggatttgtaccagaaggtggctcagtgcatatga 2692 ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2635 acatgagcaggaactggccacaggatttgtatcagaaggtggcgcagtgcatatga 2690 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 cggcggcgatggccggcgtcgg 100 |||||||||||||||||||||| Sbjct: 70 cggcggcgatggccggcgtcgg 91
>dbj|AK099999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K18, full insert sequence Length = 3073 Score = 2825 bits (1425), Expect = 0.0 Identities = 2291/2576 (88%), Gaps = 9/2576 (0%) Strand = Plus / Plus Query: 122 ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 181 |||||||||||| ||||| ||||| ||| || ||||||| |||||||||||||||||||| Sbjct: 120 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 179 Query: 182 cctcacccctcacttccctgccctccagaggaacctggaccagctcgaggtgctctccac 241 || |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 180 ccccaccccgcacttccctcccctccagaggaacctggaccagctggaggtgctctccac 239 Query: 242 caagctcaaggccaagacgatccgcgccgaggcgccgtcacagtcgctctccgccaccag 301 ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 240 caagctcaaggccaagacggtgcgcgccgaggcgcccgtgcagtcgctctccgccaccag 299 Query: 302 gttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcattcga 361 |||| |||||||||||||||||||||| ||||||||| |||| |||||||| || ||||| Sbjct: 300 gttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatccttcga 359 Query: 362 actcaagaccacctttgaggatgtttttccatcggaagcaacttctgtcgaggaatacct 421 ||| |||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| Sbjct: 360 acttaagaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacct 419 Query: 422 gcaacagcttcatgaaatggcaattgtctcatccatccaaggagcacaaaaggacaactt 481 ||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| Sbjct: 420 gcagcagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaactt 479 Query: 482 aaagagttttaacaattatatgatgcaagttcttgaggatgactggcagaaggagaagag 541 || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | Sbjct: 480 aaggagttttaacaattatatgatgcaagttctcgaggatgattggcagaaggagaagcg 539 Query: 542 agattttttgcagagtctaagccgactttctacattaccaaagagaaacaccaatcta-- 599 ||| || |||||||||||||||||||| ||||||||||| || |||||||| ||||| Sbjct: 540 agacttcttgcagagtctaagccgactctctacattaccgaaaagaaacactaatctcat 599 Query: 600 -gctggtggtctgtctcgtcatgctctgatgccatcttcagcttccagtcctcaagcttc 658 || |||| | ||||||| |||||||||||||||||||||||||||||| ||| |||| Sbjct: 600 ggccagtgggatttctcgtcctgctctgatgccatcttcagcttccagtccccaatcttc 659 Query: 659 atcagggctgcctgctgaggaagtaatgcccatacctaacaagaccataattgatagtaa 718 || || ||||| || ||||||| ||||||||||||||||| || |||||||| | || Sbjct: 660 gtccggtctgccatctaaggaagtcatgcccatacctaacaaaactataattgaaaacaa 719 Query: 719 atcttcagtttacgcgggggttgtgaaggatctcaacgatgctagaggacgcagtctgcc 778 |||||||||||| || | ||||||| ||||| || ||||||||||| ||||| || || Sbjct: 720 atcttcagtttatgctgcagttgtgagagatcttaatgatgctagagggcgcagcctacc 779 Query: 779 tttcagtcctgctacagctttcagagctgcttacgagtccttgtctcttgattgccactg 838 ||| ||||||||||||| ||||| |||||||| ||||| || ||| ||| | || | || Sbjct: 780 ttttggtcctgctacagcattcagggctgcttatgagtctttatctgttggt-gctattg 838 Query: 839 gctcaaagtcagtgaccatgcagaaagtgtggcacttgattcaggccttagtaggggaag 898 | |||| |||||||||||||| ||||||||||| || |||||||| ||||| ||||||| Sbjct: 839 ggacaaaatcagtgaccatgcataaagtgtggcatttaattcaggcattagttggggaag 898 Query: 899 ggtcttctcatagaaacgtttcaagaaaaatgtcactagtggttggagcaaggcaacacc 958 |||| ||||| ||||| ||||||||||||||||||||||| |||| || || | ||||| Sbjct: 899 ggtcaactcatcgaaacatttcaagaaaaatgtcactagtgattggtgctagacgacacc 958 Query: 959 ttgaatggggttatgagaaatacataattgagaccatcaacagccagccagcactagctg 1018 |||| |||||| |||| || |||||| ||||||||||||| ||||| || || ||||||| Sbjct: 959 ttgagtggggtcatgaaaagtacatacttgagaccatcaatagccatccggctctagctg 1018 Query: 1019 ctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggtccggttga 1078 ||||||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 1019 ctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggtccgtttgc 1078 Query: 1079 gggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagccaccagtggata 1138 |||||||||| ||| ||||||||||||||| |||||| || ||||||||||||||||| | Sbjct: 1079 gggatcatggtgtgctagactttgatgcaactgatctgcgtagacagccaccagtggaca 1138 Query: 1139 caacatggcagcagatttatttctgcttaagaactgggtattatgatgaagcaaggcaag 1198 |||||||||| ||||||||||||||||| ||||| || || |||||||| ||||| |||| Sbjct: 1139 caacatggcaacagatttatttctgcttgagaaccggatactatgatgaggcaagacaag 1198 Query: 1199 ttgctcaatcatctcgtgctgcttacaacttcgcccctctgcttgcagaatggattacta 1258 |||| ||||||||||||||||| | |||||| || || ||||||| |||||||||||||| Sbjct: 1199 ttgcccaatcatctcgtgctgcattcaactttgctcccctgcttgtagaatggattacta 1258 Query: 1259 ctaatggtgctgtgtcatcagagactgctctgacagcttctgaggaatgtgaaaaaatgc 1318 ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1259 ctaatggtgctgtatccccagagactgctctgacagcttctgaggaatgtgacaaaatgc 1318 Query: 1319 tcagaatgggtgaccgaccagggcgtcctggttatgataggaagaagttgcttctttatg 1378 | ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 1319 tgagaatgggtgatcgacctggccgtcctggttatgataggaagaagttgctcctttatg 1378 Query: 1379 ccataatttgtggctgtcgacggcaaattgacagattacttaaagatctgccaacacttt 1438 |||| || ||||| |||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1379 ccatgatctgtggttgtcgacgtcaaatcgacagattgcttaaagatctgccaacacttt 1438 Query: 1439 tcaatactatagaggatttcttgtggttcaagttgtcagctctgcgggaatactccagtg 1498 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 1439 tcaatactatagaggatttcttgtggttcaaattgtcagctctgcgggagtacaccagtg 1498 Query: 1499 catcttcttctaatgttgtgagtgaaggcttggttccttatacgctggaggatttacaaa 1558 ||||||||||||||||| | |||||||||||| |||||||| ||||||||| | |||| Sbjct: 1499 catcttcttctaatgtttcaaatgaaggcttggtgccttatactctggaggatctgcaaa 1558 Query: 1559 attatttgaacaaatttgagccatcatattatacaaaaagtggaaaagatcccttggtct 1618 ||| || ||||||||||| ||||||||||||||||| | ||||||||| |||||||||| Sbjct: 1559 gttacttaaacaaatttgaaccatcatattatacaaagaatggaaaagaccccttggtct 1618 Query: 1619 atccctatattctgctcttaagcatccaatcacttccagcaattctttatttgtctaaag 1678 |||| ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1619 atccatatgttctgctgttaagcatccaattgcttccagcaattctttatttgtctaaag 1678 Query: 1679 aagttggagaggaaggataccatgttgatgctgtgcatatttcaattactctggccgatc 1738 ||||||||||||||||||||||||| ||||||||||||||||||||| || | | |||| Sbjct: 1679 aagttggagaggaaggataccatgtagatgctgtgcatatttcaattgctttatctgatc 1738 Query: 1739 atggtattctccctgagggagttggatcaggccagaagatgggtgtaatggatgcttgcg 1798 ||||| |||||||||| || ||||| |||||||||||||||||| | ||||||||||| | Sbjct: 1739 atggtgttctccctgatggtgttgggtcaggccagaagatgggtatcatggatgcttgtg 1798 Query: 1799 cagaagctgccagtattatacggcaatatggctctgtttacttgcgcaatggcaaccttg 1858 |||||||||||||||| |||||||| ||||||||| |||| ||||| ||||| ||||||| Sbjct: 1799 cagaagctgccagtataatacggcagtatggctctatttatttgcgtaatggtaaccttg 1858 Query: 1859 atttggccttggagtattatgcacaggctgctgctgcaatgggtggaggagaggtatcat 1918 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1859 atttggccttggagtattatgcacagtctgctgctgcaatgggtggaggagaggtatcat 1918 Query: 1919 ggattggtcaagggaatgctgatcaacaacgtcaacgaagttcaatgttgaagcaactgc 1978 ||||||||| ||||||||||||||| || || || |||| | ||||||||||||||||| Sbjct: 1919 ggattggtcgagggaatgctgatcagcagcggcagcgaaatctaatgttgaagcaactgc 1978 Query: 1979 tcacagagatattactaagggatggtggtattcaacttttgcttggtccaagtggaatgg 2038 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1979 tgacagagatattactaagggatggtggcattcaacttttgcttggtccaagtggaatgg 2038 Query: 2039 gagaagaaggagaactaaaaaagtacatgatggactggagaagtaggcagcaatttttgc 2098 | |||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| || | Sbjct: 2039 gggaagaaggagaattaaagaagtatatgatggattggagaagcaggcagcaattcttac 2098 Query: 2099 ttgaagccgcccatcggtgtcaagaggcagggctctatgacaaatcggtggaaatccaca 2158 ||||||| ||||||| |||||| |||||||| |||||||||||||| |||||||| || | Sbjct: 2099 ttgaagctgcccatcagtgtcatgaggcaggcctctatgacaaatcagtggaaattcata 2158 Query: 2159 aaagagttggagcttttgccatggcacttcagacagtaaacaagtgtttatcggatgcag 2218 ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||| Sbjct: 2159 aaagagttggagcttttgccatggcacttcagacaataaataagtgcctgtcggatgcaa 2218 Query: 2219 tatgtgccctggcacacaatatgttagatggagaaagccgtgctgttggtctaattcaat 2278 |||||||| |||||| || |||||||||||| ||||| ||||||| || ||||||||| | Sbjct: 2219 tatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgctgctctaattcatt 2278 Query: 2279 ctggcaatgaaattttggagacagccagatattcttctgaagccagtgttcaagacaagg 2338 |||| ||||||||| |||| || |||||||| ||| |||||||||||||||||||||| Sbjct: 2279 ctggtaatgaaattatggaaactgccagata---ttcggaagccagtgttcaagacaagg 2335 Query: 2339 a--tcatttctgaacagcaaattgtactgagacagcttgaagctattcttcacatttata 2396 | |||| ||||| || |||| ||||||||||||||||||||||||||| || || |||| Sbjct: 2336 acctcatatctgagcaacaaactgtactgagacagcttgaagctattctccatatctata 2395 Query: 2397 ggctagctcgtgctggacaaactgttgacgctctgagggaaaccatcaaacttccatttc 2456 |||| ||||| |||||||| ||| | || ||| ||||||||||||||||||| ||||||| Sbjct: 2396 ggcttgctcgagctggacagactttagatgctttgagggaaaccatcaaactcccatttc 2455 Query: 2457 ttcatttggatccacagtctccgaatgtatcagtcgatgtattcaggaatttatcacccc 2516 ||||||||||||| ||| |||| ||||| |||| ||||| ||||| || || ||||| | Sbjct: 2456 ttcatttggatcctcaggctccaaatgtgacagttgatgtgttcagaaacttgtcaccgc 2515 Query: 2517 atgttcaagcttgtgtgccagatctcctgaaggttgctctaaactgcatggacaatgtta 2576 |||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 2516 atgttcaagcttgtgtgccagatctcttgaaggttgctctaaattgtatggacaatgtta 2575 Query: 2577 gagataccgatgggaccctgcgtgctgtcaagtcaaagattgcgaaccttgtggcaagca 2636 ||||||| ||||||||| ||||||| |||||||||||||| || ||||| |||||||||| Sbjct: 2576 gagatactgatgggaccttgcgtgcagtcaagtcaaagatcgcaaacctcgtggcaagca 2635 Query: 2637 acatgagcaggaattggccacaggatttgtaccagaaggtggctcagtgcatatga 2692 ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2636 acatgagcaggaactggccacaggatttgtatcagaaggtggcgcagtgcatatga 2691 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 cggcggcgatggccggcgtcgg 100 |||||||||||||||||||||| Sbjct: 71 cggcggcgatggccggcgtcgg 92
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 1150 bits (580), Expect = 0.0 Identities = 823/904 (91%) Strand = Plus / Plus Query: 1239 gcttgcagaatggattactactaatggtgctgtgtcatcagagactgctctgacagcttc 1298 ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 148924 gcttgtagaatggattactactaatggtgctgtatccccagagactgctctgacagcttc 148983 Query: 1299 tgaggaatgtgaaaaaatgctcagaatgggtgaccgaccagggcgtcctggttatgatag 1358 |||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||| Sbjct: 148984 tgaggaatgtgacaaaatgctgagaatgggtgatcgacctggccgtcctggttatgatag 149043 Query: 1359 gaagaagttgcttctttatgccataatttgtggctgtcgacggcaaattgacagattact 1418 |||||||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| || Sbjct: 149044 gaagaagttgctcctttatgccatgatctgtggttgtcgacgtcaaatcgacagattgct 149103 Query: 1419 taaagatctgccaacacttttcaatactatagaggatttcttgtggttcaagttgtcagc 1478 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 149104 taaagatctgccaacacttttcaatactatagaggatttcttgtggttcaaattgtcagc 149163 Query: 1479 tctgcgggaatactccagtgcatcttcttctaatgttgtgagtgaaggcttggttcctta 1538 ||||||||| ||| ||||||||||||||||||||||| | |||||||||||| ||||| Sbjct: 149164 tctgcgggagtacaccagtgcatcttcttctaatgtttcaaatgaaggcttggtgcctta 149223 Query: 1539 tacgctggaggatttacaaaattatttgaacaaatttgagccatcatattatacaaaaag 1598 ||| ||||||||| | |||| ||| || ||||||||||| ||||||||||||||||| | Sbjct: 149224 tactctggaggatctgcaaagttacttaaacaaatttgaaccatcatattatacaaagaa 149283 Query: 1599 tggaaaagatcccttggtctatccctatattctgctcttaagcatccaatcacttccagc 1658 ||||||||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||| Sbjct: 149284 tggaaaagaccccttggtctatccatatgttctgctgttaagcatccaattgcttccagc 149343 Query: 1659 aattctttatttgtctaaagaagttggagaggaaggataccatgttgatgctgtgcatat 1718 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 149344 aattctttatttgtctaaagaagttggagaggaaggataccatgtagatgctgtgcatat 149403 Query: 1719 ttcaattactctggccgatcatggtattctccctgagggagttggatcaggccagaagat 1778 ||||||| || | | ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 149404 ttcaattgctttatctgatcatggtgttctccctgatggtgttgggtcaggccagaagat 149463 Query: 1779 gggtgtaatggatgcttgcgcagaagctgccagtattatacggcaatatggctctgttta 1838 |||| | ||||||||||| ||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 149464 gggtatcatggatgcttgtgcagaagctgccagtataatacggcagtatggctctattta 149523 Query: 1839 cttgcgcaatggcaaccttgatttggccttggagtattatgcacaggctgctgctgcaat 1898 ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 149524 tttgcgtaatggtaaccttgatttggccttggagtattatgcacagtctgctgctgcaat 149583 Query: 1899 gggtggaggagaggtatcatggattggtcaagggaatgctgatcaacaacgtcaacgaag 1958 ||||||||||||||||||||||||||||| ||||||||||||||| || || || |||| Sbjct: 149584 gggtggaggagaggtatcatggattggtcgagggaatgctgatcagcagcggcagcgaaa 149643 Query: 1959 ttcaatgttgaagcaactgctcacagagatattactaagggatggtggtattcaactttt 2018 | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 149644 tctaatgttgaagcaactgctgacagagatattactaagggatggtggcattcaactttt 149703 Query: 2019 gcttggtccaagtggaatgggagaagaaggagaactaaaaaagtacatgatggactggag 2078 ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||| ||||| Sbjct: 149704 gcttggtccaagtggaatgggggaagaaggagaattaaagaagtatatgatggattggag 149763 Query: 2079 aagtaggcagcaatttttgcttgaagccgcccatcggtgtcaagaggcagggctctatga 2138 ||| ||||||||||| || |||||||| ||||||| |||||| |||||||| |||||||| Sbjct: 149764 aagcaggcagcaattcttacttgaagctgcccatcagtgtcatgaggcaggcctctatga 149823 Query: 2139 caaa 2142 |||| Sbjct: 149824 caaa 149827 Score = 309 bits (156), Expect = 3e-80 Identities = 261/295 (88%), Gaps = 2/295 (0%) Strand = Plus / Plus Query: 2322 cagtgttcaagacaagga--tcatttctgaacagcaaattgtactgagacagcttgaagc 2379 |||||||||||||||||| |||| ||||| || |||| ||||||||||||||||||||| Sbjct: 150389 cagtgttcaagacaaggacctcatatctgagcaacaaactgtactgagacagcttgaagc 150448 Query: 2380 tattcttcacatttataggctagctcgtgctggacaaactgttgacgctctgagggaaac 2439 |||||| || || |||||||| ||||| |||||||| ||| | || ||| |||||||||| Sbjct: 150449 tattctccatatctataggcttgctcgagctggacagactttagatgctttgagggaaac 150508 Query: 2440 catcaaacttccatttcttcatttggatccacagtctccgaatgtatcagtcgatgtatt 2499 ||||||||| |||||||||||||||||||| ||| |||| ||||| |||| ||||| || Sbjct: 150509 catcaaactcccatttcttcatttggatcctcaggctccaaatgtgacagttgatgtgtt 150568 Query: 2500 caggaatttatcaccccatgttcaagcttgtgtgccagatctcctgaaggttgctctaaa 2559 ||| || || ||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 150569 cagaaacttgtcaccgcatgttcaagcttgtgtgccagatctcttgaaggttgctctaaa 150628 Query: 2560 ctgcatggacaatgttagagataccgatgggaccctgcgtgctgtcaagtcaaag 2614 || |||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 150629 ttgtatggacaatgttagagatactgatgggaccttgcgtgcagtcaagtcaaag 150683 Score = 186 bits (94), Expect = 3e-43 Identities = 225/268 (83%), Gaps = 3/268 (1%) Strand = Plus / Plus Query: 517 aggatgactggcagaaggagaagagagattttttgcagagtctaagccgactttctacat 576 ||||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 146612 aggatgattggcagaaggagaagcgagacttcttgcagagtctaagccgactctctacat 146671 Query: 577 taccaaagagaaacaccaatcta---gctggtggtctgtctcgtcatgctctgatgccat 633 |||| || |||||||| ||||| || |||| | ||||||| |||||||||||||| Sbjct: 146672 taccgaaaagaaacactaatctcatggccagtgggatttctcgtcctgctctgatgccat 146731 Query: 634 cttcagcttccagtcctcaagcttcatcagggctgcctgctgaggaagtaatgcccatac 693 |||||||||||||||| ||| |||| || || ||||| || ||||||| |||||||||| Sbjct: 146732 cttcagcttccagtccccaatcttcgtccggtctgccatctaaggaagtcatgcccatac 146791 Query: 694 ctaacaagaccataattgatagtaaatcttcagtttacgcgggggttgtgaaggatctca 753 ||||||| || |||||||| | |||||||||||||| || | ||||||| ||||| | Sbjct: 146792 ctaacaaaactataattgaaaacaaatcttcagtttatgctgcagttgtgagagatctta 146851 Query: 754 acgatgctagaggacgcagtctgccttt 781 | ||||||||||| ||||| || ||||| Sbjct: 146852 atgatgctagagggcgcagcctaccttt 146879 Score = 172 bits (87), Expect = 5e-39 Identities = 147/167 (88%) Strand = Plus / Plus Query: 2146 gtggaaatccacaaaagagttggagcttttgccatggcacttcagacagtaaacaagtgt 2205 |||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 150120 gtggaaattcataaaagagttggagcttttgccatggcacttcagacaataaataagtgc 150179 Query: 2206 ttatcggatgcagtatgtgccctggcacacaatatgttagatggagaaagccgtgctgtt 2265 | ||||||||| |||||||| |||||| || |||||||||||| ||||| ||||||| | Sbjct: 150180 ctgtcggatgcaatatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgct 150239 Query: 2266 ggtctaattcaatctggcaatgaaattttggagacagccagatattc 2312 | ||||||||| ||||| ||||||||| |||| || ||||||||||| Sbjct: 150240 gctctaattcattctggtaatgaaattatggaaactgccagatattc 150286 Score = 147 bits (74), Expect = 3e-31 Identities = 89/94 (94%) Strand = Plus / Plus Query: 426 cagcttcatgaaatggcaattgtctcatccatccaaggagcacaaaaggacaacttaaag 485 |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| | Sbjct: 144610 cagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaacttaagg 144669 Query: 486 agttttaacaattatatgatgcaagttcttgagg 519 ||||||||||||||||||||||||||||| |||| Sbjct: 144670 agttttaacaattatatgatgcaagttctcgagg 144703 Score = 137 bits (69), Expect = 3e-28 Identities = 90/97 (92%) Strand = Plus / Plus Query: 207 cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 266 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct: 143169 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 143228 Query: 267 gccgaggcgccgtcacagtcgctctccgccaccaggt 303 ||||||||||| |||||||||||||||||||||| Sbjct: 143229 gccgaggcgcccgtgcagtcgctctccgccaccaggt 143265 Score = 119 bits (60), Expect = 6e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 877 attcaggccttagtaggggaagggtcttctcatagaaacgtttcaagaaaaatgtcacta 936 |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 147351 attcaggcattagttggggaagggtcaactcatcgaaacatttcaagaaaaatgtcacta 147410 Query: 937 gtggttggagcaaggcaacaccttgaatggggttatgagaaatacataattgagaccatc 996 ||| |||| || || | ||||||||| |||||| |||| || |||||| ||||||||||| Sbjct: 147411 gtgattggtgctagacgacaccttgagtggggtcatgaaaagtacatacttgagaccatc 147470 Query: 997 aacagcca 1004 || ||||| Sbjct: 147471 aatagcca 147478 Score = 103 bits (52), Expect = 4e-18 Identities = 79/88 (89%) Strand = Plus / Plus Query: 122 ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 181 |||||||||||| ||||| ||||| ||| || ||||||| |||||||||||||||||||| Sbjct: 142967 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 143026 Query: 182 cctcacccctcacttccctgccctccag 209 || |||||| ||||||||| |||||||| Sbjct: 143027 ccccaccccgcacttccctcccctccag 143054 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 1068 ggtccggttgagggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagcc 1127 |||||| ||| |||||||||| ||| ||||||||||||||| |||||| || |||||||| Sbjct: 148166 ggtccgtttgcgggatcatggtgtgctagactttgatgcaactgatctgcgtagacagcc 148225 Query: 1128 accagtggatacaacatggca 1148 ||||||||| ||||||||||| Sbjct: 148226 accagtggacacaacatggca 148246 Score = 85.7 bits (43), Expect = 8e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 1151 agatttatttctgcttaagaactgggtattatgatgaagcaaggcaagttgctcaatcat 1210 |||||||||||||||| ||||| || || |||||||| ||||| |||||||| ||||||| Sbjct: 148758 agatttatttctgcttgagaaccggatactatgatgaggcaagacaagttgcccaatcat 148817 Query: 1211 ctcgtgctgcttacaactt 1229 |||||||||| | |||||| Sbjct: 148818 ctcgtgctgcattcaactt 148836 Score = 83.8 bits (42), Expect = 3e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 299 caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 358 ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || || Sbjct: 143402 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 143461 Query: 359 cgaact 364 |||||| Sbjct: 143462 cgaact 143467 Score = 83.8 bits (42), Expect = 3e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 367 agaccacctttgaggatgtttttccatcggaagcaacttctgtcgaggaatacctgca 424 ||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 144463 agaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacctgca 144520 Score = 79.8 bits (40), Expect = 5e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 147983 gctgctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggt 148038 Score = 60.0 bits (30), Expect = 5e-05 Identities = 82/98 (83%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 786 cctgctacagctttcagagctgcttacgagtccttgtctcttgattgccactggctcaaa 845 ||||||||||| ||||| |||||||| ||||| || ||| ||| | || | ||| |||| Sbjct: 147132 cctgctacagcattcagggctgcttatgagtctttatctgttggt-gctattgggacaaa 147190 Query: 846 gtcagtgaccatgcagaaagtgtggcacttgattcagg 883 |||||||||||||| ||||||||||| || ||||||| Sbjct: 147191 atcagtgaccatgcataaagtgtggcatttaattcagg 147228 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 cggcggcgatggccggcgtcgg 100 |||||||||||||||||||||| Sbjct: 142918 cggcggcgatggccggcgtcgg 142939
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 1150 bits (580), Expect = 0.0 Identities = 823/904 (91%) Strand = Plus / Minus Query: 1239 gcttgcagaatggattactactaatggtgctgtgtcatcagagactgctctgacagcttc 1298 ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 13074467 gcttgtagaatggattactactaatggtgctgtatccccagagactgctctgacagcttc 13074408 Query: 1299 tgaggaatgtgaaaaaatgctcagaatgggtgaccgaccagggcgtcctggttatgatag 1358 |||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||| Sbjct: 13074407 tgaggaatgtgacaaaatgctgagaatgggtgatcgacctggccgtcctggttatgatag 13074348 Query: 1359 gaagaagttgcttctttatgccataatttgtggctgtcgacggcaaattgacagattact 1418 |||||||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| || Sbjct: 13074347 gaagaagttgctcctttatgccatgatctgtggttgtcgacgtcaaatcgacagattgct 13074288 Query: 1419 taaagatctgccaacacttttcaatactatagaggatttcttgtggttcaagttgtcagc 1478 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 13074287 taaagatctgccaacacttttcaatactatagaggatttcttgtggttcaaattgtcagc 13074228 Query: 1479 tctgcgggaatactccagtgcatcttcttctaatgttgtgagtgaaggcttggttcctta 1538 ||||||||| ||| ||||||||||||||||||||||| | |||||||||||| ||||| Sbjct: 13074227 tctgcgggagtacaccagtgcatcttcttctaatgtttcaaatgaaggcttggtgcctta 13074168 Query: 1539 tacgctggaggatttacaaaattatttgaacaaatttgagccatcatattatacaaaaag 1598 ||| ||||||||| | |||| ||| || ||||||||||| ||||||||||||||||| | Sbjct: 13074167 tactctggaggatctgcaaagttacttaaacaaatttgaaccatcatattatacaaagaa 13074108 Query: 1599 tggaaaagatcccttggtctatccctatattctgctcttaagcatccaatcacttccagc 1658 ||||||||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||| Sbjct: 13074107 tggaaaagaccccttggtctatccatatgttctgctgttaagcatccaattgcttccagc 13074048 Query: 1659 aattctttatttgtctaaagaagttggagaggaaggataccatgttgatgctgtgcatat 1718 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 13074047 aattctttatttgtctaaagaagttggagaggaaggataccatgtagatgctgtgcatat 13073988 Query: 1719 ttcaattactctggccgatcatggtattctccctgagggagttggatcaggccagaagat 1778 ||||||| || | | ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 13073987 ttcaattgctttatctgatcatggtgttctccctgatggtgttgggtcaggccagaagat 13073928 Query: 1779 gggtgtaatggatgcttgcgcagaagctgccagtattatacggcaatatggctctgttta 1838 |||| | ||||||||||| ||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 13073927 gggtatcatggatgcttgtgcagaagctgccagtataatacggcagtatggctctattta 13073868 Query: 1839 cttgcgcaatggcaaccttgatttggccttggagtattatgcacaggctgctgctgcaat 1898 ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 13073867 tttgcgtaatggtaaccttgatttggccttggagtattatgcacagtctgctgctgcaat 13073808 Query: 1899 gggtggaggagaggtatcatggattggtcaagggaatgctgatcaacaacgtcaacgaag 1958 ||||||||||||||||||||||||||||| ||||||||||||||| || || || |||| Sbjct: 13073807 gggtggaggagaggtatcatggattggtcgagggaatgctgatcagcagcggcagcgaaa 13073748 Query: 1959 ttcaatgttgaagcaactgctcacagagatattactaagggatggtggtattcaactttt 2018 | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 13073747 tctaatgttgaagcaactgctgacagagatattactaagggatggtggcattcaactttt 13073688 Query: 2019 gcttggtccaagtggaatgggagaagaaggagaactaaaaaagtacatgatggactggag 2078 ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||| ||||| Sbjct: 13073687 gcttggtccaagtggaatgggggaagaaggagaattaaagaagtatatgatggattggag 13073628 Query: 2079 aagtaggcagcaatttttgcttgaagccgcccatcggtgtcaagaggcagggctctatga 2138 ||| ||||||||||| || |||||||| ||||||| |||||| |||||||| |||||||| Sbjct: 13073627 aagcaggcagcaattcttacttgaagctgcccatcagtgtcatgaggcaggcctctatga 13073568 Query: 2139 caaa 2142 |||| Sbjct: 13073567 caaa 13073564 Score = 309 bits (156), Expect = 3e-80 Identities = 261/295 (88%), Gaps = 2/295 (0%) Strand = Plus / Minus Query: 2322 cagtgttcaagacaagga--tcatttctgaacagcaaattgtactgagacagcttgaagc 2379 |||||||||||||||||| |||| ||||| || |||| ||||||||||||||||||||| Sbjct: 13073002 cagtgttcaagacaaggacctcatatctgagcaacaaactgtactgagacagcttgaagc 13072943 Query: 2380 tattcttcacatttataggctagctcgtgctggacaaactgttgacgctctgagggaaac 2439 |||||| || || |||||||| ||||| |||||||| ||| | || ||| |||||||||| Sbjct: 13072942 tattctccatatctataggcttgctcgagctggacagactttagatgctttgagggaaac 13072883 Query: 2440 catcaaacttccatttcttcatttggatccacagtctccgaatgtatcagtcgatgtatt 2499 ||||||||| |||||||||||||||||||| ||| |||| ||||| |||| ||||| || Sbjct: 13072882 catcaaactcccatttcttcatttggatcctcaggctccaaatgtgacagttgatgtgtt 13072823 Query: 2500 caggaatttatcaccccatgttcaagcttgtgtgccagatctcctgaaggttgctctaaa 2559 ||| || || ||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13072822 cagaaacttgtcaccgcatgttcaagcttgtgtgccagatctcttgaaggttgctctaaa 13072763 Query: 2560 ctgcatggacaatgttagagataccgatgggaccctgcgtgctgtcaagtcaaag 2614 || |||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 13072762 ttgtatggacaatgttagagatactgatgggaccttgcgtgcagtcaagtcaaag 13072708 Score = 186 bits (94), Expect = 3e-43 Identities = 225/268 (83%), Gaps = 3/268 (1%) Strand = Plus / Minus Query: 517 aggatgactggcagaaggagaagagagattttttgcagagtctaagccgactttctacat 576 ||||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 13076779 aggatgattggcagaaggagaagcgagacttcttgcagagtctaagccgactctctacat 13076720 Query: 577 taccaaagagaaacaccaatcta---gctggtggtctgtctcgtcatgctctgatgccat 633 |||| || |||||||| ||||| || |||| | ||||||| |||||||||||||| Sbjct: 13076719 taccgaaaagaaacactaatctcatggccagtgggatttctcgtcctgctctgatgccat 13076660 Query: 634 cttcagcttccagtcctcaagcttcatcagggctgcctgctgaggaagtaatgcccatac 693 |||||||||||||||| ||| |||| || || ||||| || ||||||| |||||||||| Sbjct: 13076659 cttcagcttccagtccccaatcttcgtccggtctgccatctaaggaagtcatgcccatac 13076600 Query: 694 ctaacaagaccataattgatagtaaatcttcagtttacgcgggggttgtgaaggatctca 753 ||||||| || |||||||| | |||||||||||||| || | ||||||| ||||| | Sbjct: 13076599 ctaacaaaactataattgaaaacaaatcttcagtttatgctgcagttgtgagagatctta 13076540 Query: 754 acgatgctagaggacgcagtctgccttt 781 | ||||||||||| ||||| || ||||| Sbjct: 13076539 atgatgctagagggcgcagcctaccttt 13076512 Score = 172 bits (87), Expect = 5e-39 Identities = 147/167 (88%) Strand = Plus / Minus Query: 2146 gtggaaatccacaaaagagttggagcttttgccatggcacttcagacagtaaacaagtgt 2205 |||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 13073271 gtggaaattcataaaagagttggagcttttgccatggcacttcagacaataaataagtgc 13073212 Query: 2206 ttatcggatgcagtatgtgccctggcacacaatatgttagatggagaaagccgtgctgtt 2265 | ||||||||| |||||||| |||||| || |||||||||||| ||||| ||||||| | Sbjct: 13073211 ctgtcggatgcaatatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgct 13073152 Query: 2266 ggtctaattcaatctggcaatgaaattttggagacagccagatattc 2312 | ||||||||| ||||| ||||||||| |||| || ||||||||||| Sbjct: 13073151 gctctaattcattctggtaatgaaattatggaaactgccagatattc 13073105 Score = 147 bits (74), Expect = 3e-31 Identities = 89/94 (94%) Strand = Plus / Minus Query: 426 cagcttcatgaaatggcaattgtctcatccatccaaggagcacaaaaggacaacttaaag 485 |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| | Sbjct: 13078803 cagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaacttaagg 13078744 Query: 486 agttttaacaattatatgatgcaagttcttgagg 519 ||||||||||||||||||||||||||||| |||| Sbjct: 13078743 agttttaacaattatatgatgcaagttctcgagg 13078710 Score = 137 bits (69), Expect = 3e-28 Identities = 90/97 (92%) Strand = Plus / Minus Query: 207 cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 266 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct: 13080244 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 13080185 Query: 267 gccgaggcgccgtcacagtcgctctccgccaccaggt 303 ||||||||||| |||||||||||||||||||||| Sbjct: 13080184 gccgaggcgcccgtgcagtcgctctccgccaccaggt 13080148 Score = 119 bits (60), Expect = 6e-23 Identities = 111/128 (86%) Strand = Plus / Minus Query: 877 attcaggccttagtaggggaagggtcttctcatagaaacgtttcaagaaaaatgtcacta 936 |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 13076040 attcaggcattagttggggaagggtcaactcatcgaaacatttcaagaaaaatgtcacta 13075981 Query: 937 gtggttggagcaaggcaacaccttgaatggggttatgagaaatacataattgagaccatc 996 ||| |||| || || | ||||||||| |||||| |||| || |||||| ||||||||||| Sbjct: 13075980 gtgattggtgctagacgacaccttgagtggggtcatgaaaagtacatacttgagaccatc 13075921 Query: 997 aacagcca 1004 || ||||| Sbjct: 13075920 aatagcca 13075913 Score = 111 bits (56), Expect = 1e-20 Identities = 68/72 (94%) Strand = Plus / Minus Query: 2621 aaccttgtggcaagcaacatgagcaggaattggccacaggatttgtaccagaaggtggct 2680 ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 13072001 aacctcgtggcaagcaacatgagcaggaactggccacaggatttgtatcagaaggtggcg 13071942 Query: 2681 cagtgcatatga 2692 |||||||||||| Sbjct: 13071941 cagtgcatatga 13071930 Score = 103 bits (52), Expect = 4e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 122 ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 181 |||||||||||| ||||| ||||| ||| || ||||||| |||||||||||||||||||| Sbjct: 13080446 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 13080387 Query: 182 cctcacccctcacttccctgccctccag 209 || |||||| ||||||||| |||||||| Sbjct: 13080386 ccccaccccgcacttccctcccctccag 13080359 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 1068 ggtccggttgagggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagcc 1127 |||||| ||| |||||||||| ||| ||||||||||||||| |||||| || |||||||| Sbjct: 13075225 ggtccgtttgcgggatcatggtgtgctagactttgatgcaactgatctgcgtagacagcc 13075166 Query: 1128 accagtggatacaacatggca 1148 ||||||||| ||||||||||| Sbjct: 13075165 accagtggacacaacatggca 13075145 Score = 85.7 bits (43), Expect = 8e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 1151 agatttatttctgcttaagaactgggtattatgatgaagcaaggcaagttgctcaatcat 1210 |||||||||||||||| ||||| || || |||||||| ||||| |||||||| ||||||| Sbjct: 13074633 agatttatttctgcttgagaaccggatactatgatgaggcaagacaagttgcccaatcat 13074574 Query: 1211 ctcgtgctgcttacaactt 1229 |||||||||| | |||||| Sbjct: 13074573 ctcgtgctgcattcaactt 13074555 Score = 83.8 bits (42), Expect = 3e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 367 agaccacctttgaggatgtttttccatcggaagcaacttctgtcgaggaatacctgca 424 ||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 13078950 agaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacctgca 13078893 Score = 83.8 bits (42), Expect = 3e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 299 caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 358 ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || || Sbjct: 13080011 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 13079952 Query: 359 cgaact 364 |||||| Sbjct: 13079951 cgaact 13079946 Score = 79.8 bits (40), Expect = 5e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 13075408 gctgctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggt 13075353 Score = 60.0 bits (30), Expect = 5e-05 Identities = 82/98 (83%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 786 cctgctacagctttcagagctgcttacgagtccttgtctcttgattgccactggctcaaa 845 ||||||||||| ||||| |||||||| ||||| || ||| ||| | || | ||| |||| Sbjct: 13076259 cctgctacagcattcagggctgcttatgagtctttatctgttggt-gctattgggacaaa 13076201 Query: 846 gtcagtgaccatgcagaaagtgtggcacttgattcagg 883 |||||||||||||| ||||||||||| || ||||||| Sbjct: 13076200 atcagtgaccatgcataaagtgtggcatttaattcagg 13076163 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 cggcggcgatggccggcgtcgg 100 |||||||||||||||||||||| Sbjct: 13080495 cggcggcgatggccggcgtcgg 13080474
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 1150 bits (580), Expect = 0.0 Identities = 823/904 (91%) Strand = Plus / Minus Query: 1239 gcttgcagaatggattactactaatggtgctgtgtcatcagagactgctctgacagcttc 1298 ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 155390 gcttgtagaatggattactactaatggtgctgtatccccagagactgctctgacagcttc 155331 Query: 1299 tgaggaatgtgaaaaaatgctcagaatgggtgaccgaccagggcgtcctggttatgatag 1358 |||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||| Sbjct: 155330 tgaggaatgtgacaaaatgctgagaatgggtgatcgacctggccgtcctggttatgatag 155271 Query: 1359 gaagaagttgcttctttatgccataatttgtggctgtcgacggcaaattgacagattact 1418 |||||||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| || Sbjct: 155270 gaagaagttgctcctttatgccatgatctgtggttgtcgacgtcaaatcgacagattgct 155211 Query: 1419 taaagatctgccaacacttttcaatactatagaggatttcttgtggttcaagttgtcagc 1478 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 155210 taaagatctgccaacacttttcaatactatagaggatttcttgtggttcaaattgtcagc 155151 Query: 1479 tctgcgggaatactccagtgcatcttcttctaatgttgtgagtgaaggcttggttcctta 1538 ||||||||| ||| ||||||||||||||||||||||| | |||||||||||| ||||| Sbjct: 155150 tctgcgggagtacaccagtgcatcttcttctaatgtttcaaatgaaggcttggtgcctta 155091 Query: 1539 tacgctggaggatttacaaaattatttgaacaaatttgagccatcatattatacaaaaag 1598 ||| ||||||||| | |||| ||| || ||||||||||| ||||||||||||||||| | Sbjct: 155090 tactctggaggatctgcaaagttacttaaacaaatttgaaccatcatattatacaaagaa 155031 Query: 1599 tggaaaagatcccttggtctatccctatattctgctcttaagcatccaatcacttccagc 1658 ||||||||| |||||||||||||| ||| ||||||| ||||||||||||| |||||||| Sbjct: 155030 tggaaaagaccccttggtctatccatatgttctgctgttaagcatccaattgcttccagc 154971 Query: 1659 aattctttatttgtctaaagaagttggagaggaaggataccatgttgatgctgtgcatat 1718 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 154970 aattctttatttgtctaaagaagttggagaggaaggataccatgtagatgctgtgcatat 154911 Query: 1719 ttcaattactctggccgatcatggtattctccctgagggagttggatcaggccagaagat 1778 ||||||| || | | ||||||||| |||||||||| || ||||| |||||||||||||| Sbjct: 154910 ttcaattgctttatctgatcatggtgttctccctgatggtgttgggtcaggccagaagat 154851 Query: 1779 gggtgtaatggatgcttgcgcagaagctgccagtattatacggcaatatggctctgttta 1838 |||| | ||||||||||| ||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 154850 gggtatcatggatgcttgtgcagaagctgccagtataatacggcagtatggctctattta 154791 Query: 1839 cttgcgcaatggcaaccttgatttggccttggagtattatgcacaggctgctgctgcaat 1898 ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 154790 tttgcgtaatggtaaccttgatttggccttggagtattatgcacagtctgctgctgcaat 154731 Query: 1899 gggtggaggagaggtatcatggattggtcaagggaatgctgatcaacaacgtcaacgaag 1958 ||||||||||||||||||||||||||||| ||||||||||||||| || || || |||| Sbjct: 154730 gggtggaggagaggtatcatggattggtcgagggaatgctgatcagcagcggcagcgaaa 154671 Query: 1959 ttcaatgttgaagcaactgctcacagagatattactaagggatggtggtattcaactttt 2018 | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 154670 tctaatgttgaagcaactgctgacagagatattactaagggatggtggcattcaactttt 154611 Query: 2019 gcttggtccaagtggaatgggagaagaaggagaactaaaaaagtacatgatggactggag 2078 ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||| ||||| Sbjct: 154610 gcttggtccaagtggaatgggggaagaaggagaattaaagaagtatatgatggattggag 154551 Query: 2079 aagtaggcagcaatttttgcttgaagccgcccatcggtgtcaagaggcagggctctatga 2138 ||| ||||||||||| || |||||||| ||||||| |||||| |||||||| |||||||| Sbjct: 154550 aagcaggcagcaattcttacttgaagctgcccatcagtgtcatgaggcaggcctctatga 154491 Query: 2139 caaa 2142 |||| Sbjct: 154490 caaa 154487 Score = 309 bits (156), Expect = 3e-80 Identities = 261/295 (88%), Gaps = 2/295 (0%) Strand = Plus / Minus Query: 2322 cagtgttcaagacaagga--tcatttctgaacagcaaattgtactgagacagcttgaagc 2379 |||||||||||||||||| |||| ||||| || |||| ||||||||||||||||||||| Sbjct: 153925 cagtgttcaagacaaggacctcatatctgagcaacaaactgtactgagacagcttgaagc 153866 Query: 2380 tattcttcacatttataggctagctcgtgctggacaaactgttgacgctctgagggaaac 2439 |||||| || || |||||||| ||||| |||||||| ||| | || ||| |||||||||| Sbjct: 153865 tattctccatatctataggcttgctcgagctggacagactttagatgctttgagggaaac 153806 Query: 2440 catcaaacttccatttcttcatttggatccacagtctccgaatgtatcagtcgatgtatt 2499 ||||||||| |||||||||||||||||||| ||| |||| ||||| |||| ||||| || Sbjct: 153805 catcaaactcccatttcttcatttggatcctcaggctccaaatgtgacagttgatgtgtt 153746 Query: 2500 caggaatttatcaccccatgttcaagcttgtgtgccagatctcctgaaggttgctctaaa 2559 ||| || || ||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 153745 cagaaacttgtcaccgcatgttcaagcttgtgtgccagatctcttgaaggttgctctaaa 153686 Query: 2560 ctgcatggacaatgttagagataccgatgggaccctgcgtgctgtcaagtcaaag 2614 || |||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 153685 ttgtatggacaatgttagagatactgatgggaccttgcgtgcagtcaagtcaaag 153631 Score = 186 bits (94), Expect = 3e-43 Identities = 225/268 (83%), Gaps = 3/268 (1%) Strand = Plus / Minus Query: 517 aggatgactggcagaaggagaagagagattttttgcagagtctaagccgactttctacat 576 ||||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||| Sbjct: 157702 aggatgattggcagaaggagaagcgagacttcttgcagagtctaagccgactctctacat 157643 Query: 577 taccaaagagaaacaccaatcta---gctggtggtctgtctcgtcatgctctgatgccat 633 |||| || |||||||| ||||| || |||| | ||||||| |||||||||||||| Sbjct: 157642 taccgaaaagaaacactaatctcatggccagtgggatttctcgtcctgctctgatgccat 157583 Query: 634 cttcagcttccagtcctcaagcttcatcagggctgcctgctgaggaagtaatgcccatac 693 |||||||||||||||| ||| |||| || || ||||| || ||||||| |||||||||| Sbjct: 157582 cttcagcttccagtccccaatcttcgtccggtctgccatctaaggaagtcatgcccatac 157523 Query: 694 ctaacaagaccataattgatagtaaatcttcagtttacgcgggggttgtgaaggatctca 753 ||||||| || |||||||| | |||||||||||||| || | ||||||| ||||| | Sbjct: 157522 ctaacaaaactataattgaaaacaaatcttcagtttatgctgcagttgtgagagatctta 157463 Query: 754 acgatgctagaggacgcagtctgccttt 781 | ||||||||||| ||||| || ||||| Sbjct: 157462 atgatgctagagggcgcagcctaccttt 157435 Score = 172 bits (87), Expect = 5e-39 Identities = 147/167 (88%) Strand = Plus / Minus Query: 2146 gtggaaatccacaaaagagttggagcttttgccatggcacttcagacagtaaacaagtgt 2205 |||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 154194 gtggaaattcataaaagagttggagcttttgccatggcacttcagacaataaataagtgc 154135 Query: 2206 ttatcggatgcagtatgtgccctggcacacaatatgttagatggagaaagccgtgctgtt 2265 | ||||||||| |||||||| |||||| || |||||||||||| ||||| ||||||| | Sbjct: 154134 ctgtcggatgcaatatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgct 154075 Query: 2266 ggtctaattcaatctggcaatgaaattttggagacagccagatattc 2312 | ||||||||| ||||| ||||||||| |||| || ||||||||||| Sbjct: 154074 gctctaattcattctggtaatgaaattatggaaactgccagatattc 154028 Score = 147 bits (74), Expect = 3e-31 Identities = 89/94 (94%) Strand = Plus / Minus Query: 426 cagcttcatgaaatggcaattgtctcatccatccaaggagcacaaaaggacaacttaaag 485 |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| | Sbjct: 159726 cagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaacttaagg 159667 Query: 486 agttttaacaattatatgatgcaagttcttgagg 519 ||||||||||||||||||||||||||||| |||| Sbjct: 159666 agttttaacaattatatgatgcaagttctcgagg 159633 Score = 137 bits (69), Expect = 3e-28 Identities = 90/97 (92%) Strand = Plus / Minus Query: 207 cagaggaacctggaccagctcgaggtgctctccaccaagctcaaggccaagacgatccgc 266 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct: 161167 cagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgc 161108 Query: 267 gccgaggcgccgtcacagtcgctctccgccaccaggt 303 ||||||||||| |||||||||||||||||||||| Sbjct: 161107 gccgaggcgcccgtgcagtcgctctccgccaccaggt 161071 Score = 119 bits (60), Expect = 6e-23 Identities = 111/128 (86%) Strand = Plus / Minus Query: 877 attcaggccttagtaggggaagggtcttctcatagaaacgtttcaagaaaaatgtcacta 936 |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 156963 attcaggcattagttggggaagggtcaactcatcgaaacatttcaagaaaaatgtcacta 156904 Query: 937 gtggttggagcaaggcaacaccttgaatggggttatgagaaatacataattgagaccatc 996 ||| |||| || || | ||||||||| |||||| |||| || |||||| ||||||||||| Sbjct: 156903 gtgattggtgctagacgacaccttgagtggggtcatgaaaagtacatacttgagaccatc 156844 Query: 997 aacagcca 1004 || ||||| Sbjct: 156843 aatagcca 156836 Score = 111 bits (56), Expect = 1e-20 Identities = 68/72 (94%) Strand = Plus / Minus Query: 2621 aaccttgtggcaagcaacatgagcaggaattggccacaggatttgtaccagaaggtggct 2680 ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 152924 aacctcgtggcaagcaacatgagcaggaactggccacaggatttgtatcagaaggtggcg 152865 Query: 2681 cagtgcatatga 2692 |||||||||||| Sbjct: 152864 cagtgcatatga 152853 Score = 103 bits (52), Expect = 4e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 122 ggagatgggcggctggtcagagcttctcaacacctccaccaagctcctcgagcaggccgc 181 |||||||||||| ||||| ||||| ||| || ||||||| |||||||||||||||||||| Sbjct: 161369 ggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgc 161310 Query: 182 cctcacccctcacttccctgccctccag 209 || |||||| ||||||||| |||||||| Sbjct: 161309 ccccaccccgcacttccctcccctccag 161282 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 1068 ggtccggttgagggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagcc 1127 |||||| ||| |||||||||| ||| ||||||||||||||| |||||| || |||||||| Sbjct: 156148 ggtccgtttgcgggatcatggtgtgctagactttgatgcaactgatctgcgtagacagcc 156089 Query: 1128 accagtggatacaacatggca 1148 ||||||||| ||||||||||| Sbjct: 156088 accagtggacacaacatggca 156068 Score = 85.7 bits (43), Expect = 8e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 1151 agatttatttctgcttaagaactgggtattatgatgaagcaaggcaagttgctcaatcat 1210 |||||||||||||||| ||||| || || |||||||| ||||| |||||||| ||||||| Sbjct: 155556 agatttatttctgcttgagaaccggatactatgatgaggcaagacaagttgcccaatcat 155497 Query: 1211 ctcgtgctgcttacaactt 1229 |||||||||| | |||||| Sbjct: 155496 ctcgtgctgcattcaactt 155478 Score = 83.8 bits (42), Expect = 3e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 367 agaccacctttgaggatgtttttccatcggaagcaacttctgtcgaggaatacctgca 424 ||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||| Sbjct: 159873 agaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacctgca 159816 Score = 83.8 bits (42), Expect = 3e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 299 caggttgctggcgcgcgaggggatcaatgctgagcagctcaccagagacctcaagtcatt 358 ||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| || || Sbjct: 160934 caggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatcctt 160875 Query: 359 cgaact 364 |||||| Sbjct: 160874 cgaact 160869 Score = 79.8 bits (40), Expect = 5e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct: 156331 gctgctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggt 156276 Score = 60.0 bits (30), Expect = 5e-05 Identities = 82/98 (83%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 786 cctgctacagctttcagagctgcttacgagtccttgtctcttgattgccactggctcaaa 845 ||||||||||| ||||| |||||||| ||||| || ||| ||| | || | ||| |||| Sbjct: 157182 cctgctacagcattcagggctgcttatgagtctttatctgttggt-gctattgggacaaa 157124 Query: 846 gtcagtgaccatgcagaaagtgtggcacttgattcagg 883 |||||||||||||| ||||||||||| || ||||||| Sbjct: 157123 atcagtgaccatgcataaagtgtggcatttaattcagg 157086 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 cggcggcgatggccggcgtcgg 100 |||||||||||||||||||||| Sbjct: 161418 cggcggcgatggccggcgtcgg 161397
>gb|AY108425.1| Zea mays PCO146490 mRNA sequence Length = 775 Score = 593 bits (299), Expect = e-165 Identities = 524/598 (87%), Gaps = 2/598 (0%) Strand = Plus / Plus Query: 2098 cttgaagccgcccatcggtgtcaagaggcagggctctatgacaaatcggtggaaatccac 2157 |||||||| |||||||||||||||||||| ||||||||||||||| | |||||||| ||| Sbjct: 12 cttgaagctgcccatcggtgtcaagaggctgggctctatgacaaagctgtggaaattcac 71 Query: 2158 aaaagagttggagcttttgccatggcacttcagacagtaaacaagtgtttatcggatgca 2217 |||||||| ||||| ||||||||||| ||||||||| |||||||||| || || |||||| Sbjct: 72 aaaagagtaggagcctttgccatggctcttcagacaataaacaagtgcttgtctgatgca 131 Query: 2218 gtatgtgccctggcacacaatatgttagatggagaaagccgtgctgttggtctaattcaa 2277 || |||||| |||||| | |||||||||||| || || ||||||| || |||||||| Sbjct: 132 gtctgtgccatggcacggagtatgttagatggcgagagtcgtgctgctgccctaattcat 191 Query: 2278 tctggcaatgaaattttggagacagccagatattcttctgaagccagtgttcaagacaag 2337 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||| Sbjct: 192 tctggcaatgaaattttggagacagctagatactcttctgaagccagcattcaagagaag 251 Query: 2338 ga--tcatttctgaacagcaaattgtactgagacagcttgaagctattcttcacatttat 2395 || |||||||||| || |||| ||| ||||||||||||||||||||||| || |||||| Sbjct: 252 gacctcatttctgagcaacaaactgtgctgagacagcttgaagctattctccatatttat 311 Query: 2396 aggctagctcgtgctggacaaactgttgacgctctgagggaaaccatcaaacttccattt 2455 ||||||||||| ||||| |||||||| || ||| ||||||||||||||| || || || Sbjct: 312 aggctagctcgagctgggcaaactgtagatgctttgagggaaaccatcaggctacccttc 371 Query: 2456 cttcatttggatccacagtctccgaatgtatcagtcgatgtattcaggaatttatcaccc 2515 ||||||||||| || || |||| ||||| | || || | |||||||| || |||||| Sbjct: 372 cttcatttggaccccaaggctccaaatgtgactgttgacattttcaggaacttgtcaccc 431 Query: 2516 catgttcaagcttgtgtgccagatctcctgaaggttgctctaaactgcatggacaatgtt 2575 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 432 catgttcaagcttgcgtgccagatctcctgaaggttgctctaaattgcattgacaatgtt 491 Query: 2576 agagataccgatgggaccctgcgtgctgtcaagtcaaagattgcgaaccttgtggcaagc 2635 |||||||| ||||||||| |||| |||||||| |||||||| || |||||||| |||||| Sbjct: 492 agagatactgatgggaccttgcgcgctgtcaaatcaaagatcgcaaaccttgtagcaagc 551 Query: 2636 aacatgagcaggaattggccacaggatttgtaccagaaggtggctcagtgcatatgaa 2693 ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 552 aacatgagccggaattggccacaggatttgtatcagaaggtggcacagtgcatatgaa 609
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete sequence Length = 105618 Score = 107 bits (54), Expect = 2e-19 Identities = 165/202 (81%) Strand = Plus / Minus Query: 1447 atagaggatttcttgtggttcaagttgtcagctctgcgggaatactccagtgcatcttct 1506 ||||||||||||||||||||||| ||||| ||| ||||||| | | |||||| |||||| Sbjct: 50769 atagaggatttcttgtggttcaaattgtcggctgtgcgggactgccccagtggatcttcg 50710 Query: 1507 tctaatgttgtgagtgaaggcttggttccttatacgctggaggatttacaaaattatttg 1566 || | |||| | ||||| || ||| |||| || | |||| ||||| |||| ||| | Sbjct: 50709 tccattgttctaagtgatggtttgattccatacagtttggatgatttgcaaagttaccta 50650 Query: 1567 aacaaatttgagccatcatattatacaaaaagtggaaaagatcccttggtctatccctat 1626 || |||||||| |||||||| |||||||||| |||||||||||| |||| ||||||||| Sbjct: 50649 aataaatttgaaccatcatactatacaaaaaatggaaaagatcctctggtatatccctat 50590 Query: 1627 attctgctcttaagcatccaat 1648 || |||| |||||||| |||| Sbjct: 50589 atcttgcttttaagcattcaat 50568 Score = 50.1 bits (25), Expect = 0.047 Identities = 46/53 (86%) Strand = Plus / Minus Query: 2504 aatttatcaccccatgttcaagcttgtgtgccagatctcctgaaggttgctct 2556 |||||||| || ||||| ||||||||| | ||||| ||| ||||||||||||| Sbjct: 48653 aatttatctcctcatgtccaagcttgtataccagacctcttgaaggttgctct 48601 Score = 46.1 bits (23), Expect = 0.73 Identities = 68/83 (81%) Strand = Plus / Minus Query: 430 ttcatgaaatggcaattgtctcatccatccaaggagcacaaaaggacaacttaaagagtt 489 |||||||||||||||| ||||| || |||| | ||| || ||||| ||| ||| ||||| Sbjct: 54902 ttcatgaaatggcaatggtctctgccgtccaggaagctcagaaggataacctaaggagtt 54843 Query: 490 ttaacaattatatgatgcaagtt 512 | || ||||||||||| ||||| Sbjct: 54842 tcaatgattatatgatgaaagtt 54820
>gb|AY021663.1| Oryza sativa microsatellite MRG3988 containing (TA)X32, closest to marker C198 , genomic sequence Length = 264 Score = 99.6 bits (50), Expect = 6e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 454 ccatccaaggagcacaaaaggacaacttaaagagttttaacaattatatgatgcaagttc 513 |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 264 ccattcaagaagcacaaaaggacaacttaaggagttttaacaattatatgatgcaagttc 205 Query: 514 ttgagg 519 | |||| Sbjct: 204 tcgagg 199
>ref|NM_129725.2| Arabidopsis thaliana unknown protein (AT2G41620) mRNA, complete cds Length = 2911 Score = 83.8 bits (42), Expect = 3e-12 Identities = 138/170 (81%) Strand = Plus / Plus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggtccgg 1074 ||||||||||||||||| ||||| ||| | |||| ||||||||| || |||||| | || Sbjct: 958 gctgctcttggtggatctgttggaaatttgcaaagaattcgtgctttccttcggattcgt 1017 Query: 1075 ttgagggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagccaccagtg 1134 ||||| || |||| || ||||| |||||| ||| |||| ||| || ||||| || || Sbjct: 1018 ttgagagactatggagttttagattttgattcaactgatgctcgtaggcagcctcctgtt 1077 Query: 1135 gatacaacatggcagcagatttatttctgcttaagaactgggtattatga 1184 ||||| || ||||| ||||| ||||| ||||| |||||||||||||||| Sbjct: 1078 gatactacttggcaacagatatatttttgcttgcgaactgggtattatga 1127 Score = 50.1 bits (25), Expect = 0.047 Identities = 28/29 (96%) Strand = Plus / Plus Query: 414 gaatacctgcaacagcttcatgaaatggc 442 ||||||||||||||| ||||||||||||| Sbjct: 358 gaatacctgcaacaggttcatgaaatggc 386 Score = 50.1 bits (25), Expect = 0.047 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1570 aaatttgagccatcatattatacaaaaagtggaaaagatcccttggtctatcc 1622 ||||||||||| ||||| || ||||| | ||||||||| |||||||| ||||| Sbjct: 1513 aaatttgagccttcatactacacaaagaatggaaaagaccccttggtatatcc 1565
>gb|AY113905.1| Arabidopsis thaliana unknown protein (At2g41620) mRNA, complete cds Length = 2586 Score = 83.8 bits (42), Expect = 3e-12 Identities = 138/170 (81%) Strand = Plus / Plus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggtccgg 1074 ||||||||||||||||| ||||| ||| | |||| ||||||||| || |||||| | || Sbjct: 907 gctgctcttggtggatctgttggaaatttgcaaagaattcgtgctttccttcggattcgt 966 Query: 1075 ttgagggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagccaccagtg 1134 ||||| || |||| || ||||| |||||| ||| |||| ||| || ||||| || || Sbjct: 967 ttgagagactatggagttttagattttgattcaactgatgctcgtaggcagcctcctgtt 1026 Query: 1135 gatacaacatggcagcagatttatttctgcttaagaactgggtattatga 1184 ||||| || ||||| ||||| ||||| ||||| |||||||||||||||| Sbjct: 1027 gatactacttggcaacagatatatttttgcttgcgaactgggtattatga 1076 Score = 50.1 bits (25), Expect = 0.047 Identities = 28/29 (96%) Strand = Plus / Plus Query: 414 gaatacctgcaacagcttcatgaaatggc 442 ||||||||||||||| ||||||||||||| Sbjct: 307 gaatacctgcaacaggttcatgaaatggc 335 Score = 50.1 bits (25), Expect = 0.047 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1570 aaatttgagccatcatattatacaaaaagtggaaaagatcccttggtctatcc 1622 ||||||||||| ||||| || ||||| | ||||||||| |||||||| ||||| Sbjct: 1462 aaatttgagccttcatactacacaaagaatggaaaagaccccttggtatatcc 1514
>gb|AY034907.1| Arabidopsis thaliana unknown protein (At2g41620) mRNA, complete cds Length = 2878 Score = 83.8 bits (42), Expect = 3e-12 Identities = 138/170 (81%) Strand = Plus / Plus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggtccgg 1074 ||||||||||||||||| ||||| ||| | |||| ||||||||| || |||||| | || Sbjct: 958 gctgctcttggtggatctgttggaaatttgcaaagaattcgtgctttccttcggattcgt 1017 Query: 1075 ttgagggatcatggcgtgttagactttgatgcaagtgatcttcgcagacagccaccagtg 1134 ||||| || |||| || ||||| |||||| ||| |||| ||| || ||||| || || Sbjct: 1018 ttgagagactatggagttttagattttgattcaactgatgctcgtaggcagcctcctgtt 1077 Query: 1135 gatacaacatggcagcagatttatttctgcttaagaactgggtattatga 1184 ||||| || ||||| ||||| ||||| ||||| |||||||||||||||| Sbjct: 1078 gatactacttggcaacagatatatttttgcttgcgaactgggtattatga 1127 Score = 50.1 bits (25), Expect = 0.047 Identities = 28/29 (96%) Strand = Plus / Plus Query: 414 gaatacctgcaacagcttcatgaaatggc 442 ||||||||||||||| ||||||||||||| Sbjct: 358 gaatacctgcaacaggttcatgaaatggc 386 Score = 50.1 bits (25), Expect = 0.047 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1570 aaatttgagccatcatattatacaaaaagtggaaaagatcccttggtctatcc 1622 ||||||||||| ||||| || ||||| | ||||||||| |||||||| ||||| Sbjct: 1513 aaatttgagccttcatactacacaaagaatggaaaagaccccttggtatatcc 1565
>gb|AC189231.1| Brassica rapa subsp. pekinensis clone KBrB013M01, complete sequence Length = 126690 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| ||||| ||| | |||| ||||||||| ||||||||||| Sbjct: 98680 gctgctcttggtggatctgttggaaatttgcaaagaattcgtgcctttcttcgggt 98625
>emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BAC clone F28O9 Length = 85710 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| ||||| ||| | |||| ||||||||| ||||||||||| Sbjct: 62415 gctgctcttggtggatcagttggaaatttgcaaagaattcgtgcttttcttcgggt 62360
>ref|NM_115595.1| Arabidopsis thaliana unknown protein (AT3G57350) mRNA, complete cds Length = 2628 Score = 61.9 bits (31), Expect = 1e-05 Identities = 49/55 (89%) Strand = Plus / Plus Query: 1014 agctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgg 1068 |||||||||||||||||| ||||| ||| | |||| ||||||||| ||||||||| Sbjct: 939 agctgctcttggtggatcagttggaaatttgcaaagaattcgtgcttttcttcgg 993 Score = 56.0 bits (28), Expect = 8e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 414 gaatacctgcaacagcttcatgaaatggcaat 445 ||||||||||||||| |||||||||||||||| Sbjct: 346 gaatacctgcaacaggttcatgaaatggcaat 377
>gb|DQ108458.1| Corchorus olitorius SSR marker J-53-M13F genomic sequence Length = 887 Score = 60.0 bits (30), Expect = 5e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1567 aacaaatttgagccatcatattatacaaaaagtggaaa 1604 ||||||||||||||||||||||||||||| | |||||| Sbjct: 188 aacaaatttgagccatcatattatacaaagaatggaaa 225 Score = 58.0 bits (29), Expect = 2e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1873 tattatgcacaggctgctgctgcaatgggtggaggagaggtatcatgga 1921 ||||||||||| |||||||||||| | ||||| ||| |||||||||||| Sbjct: 494 tattatgcacaagctgctgctgcagtcggtggtggacaggtatcatgga 542 Score = 48.1 bits (24), Expect = 0.18 Identities = 66/80 (82%) Strand = Plus / Plus Query: 1400 ggcaaattgacagattacttaaagatctgccaacacttttcaatactatagaggatttct 1459 ||||||||||| | | |||| |||| | ||| ||||||||| ||| |||||||||||| Sbjct: 21 ggcaaattgaccgcctccttagagatataccatcacttttcagtaccatagaggatttcc 80 Query: 1460 tgtggttcaagttgtcagct 1479 | ||||||| ||||||||| Sbjct: 81 tatggttcatattgtcagct 100
>gb|AC189568.1| Brassica rapa subsp. pekinensis clone KBrH009I04, complete sequence Length = 162363 Score = 56.0 bits (28), Expect = 8e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| ||||| ||| | |||| ||||||||| || |||||||| Sbjct: 60111 gctgctcttggtggatctgttggaaatttgcaaagaattcgtgctttccttcgggt 60056
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 56.0 bits (28), Expect = 8e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 1015 gctgctcttggtggatcggttggcaatcttcaaaaaattcgtgcatttcttcgggt 1070 ||||||||||||||||| ||||| ||| | |||| ||||||||| || |||||||| Sbjct: 53524 gctgctcttggtggatctgttggaaatttgcaaagaattcgtgctttccttcgggt 53469 Score = 50.1 bits (25), Expect = 0.047 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1570 aaatttgagccatcatattatacaaaaagtggaaaagatcccttggtctatcc 1622 ||||||||||| ||||| || ||||| | ||||||||| |||||||| ||||| Sbjct: 52690 aaatttgagccttcatactacacaaagaatggaaaagaccccttggtatatcc 52638
>ref|NM_001056642.1| Oryza sativa (japonica cultivar-group) Os03g0349100 (Os03g0349100) mRNA, complete cds Length = 651 Score = 52.0 bits (26), Expect = 0.012 Identities = 29/30 (96%) Strand = Plus / Minus Query: 490 ttaacaattatatgatgcaagttcttgagg 519 ||||||||||||||||||||||||| |||| Sbjct: 651 ttaacaattatatgatgcaagttctcgagg 622
>emb|CT033779.9| Mouse DNA sequence from clone RP24-230F21 on chromosome 9, complete sequence Length = 161997 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 999 cagccagccagcactagctgctct 1022 |||||||||||||||||||||||| Sbjct: 114918 cagccagccagcactagctgctct 114941
>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence Length = 171374 Score = 48.1 bits (24), Expect = 0.18 Identities = 24/24 (100%) Strand = Plus / Plus Query: 999 cagccagccagcactagctgctct 1022 |||||||||||||||||||||||| Sbjct: 47149 cagccagccagcactagctgctct 47172
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.73 Identities = 23/23 (100%) Strand = Plus / Plus Query: 89 ggccggcgtcggagccgatggcg 111 ||||||||||||||||||||||| Sbjct: 1059520 ggccggcgtcggagccgatggcg 1059542
>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209961 Score = 46.1 bits (23), Expect = 0.73 Identities = 26/27 (96%) Strand = Plus / Minus Query: 566 actttctacattaccaaagagaaacac 592 |||| |||||||||||||||||||||| Sbjct: 139567 acttgctacattaccaaagagaaacac 139541
>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146120 Score = 46.1 bits (23), Expect = 0.73 Identities = 26/27 (96%) Strand = Plus / Minus Query: 566 actttctacattaccaaagagaaacac 592 |||| |||||||||||||||||||||| Sbjct: 120701 acttgctacattaccaaagagaaacac 120675
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 cggcggcgatggccggcgtcgg 100 |||||||||||||||||||||| Sbjct: 60167 cggcggcgatggccggcgtcgg 60146
>gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062D09, complete sequence Length = 160244 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1319 tcagaatgggtgaccgaccagg 1340 |||||||||||||||||||||| Sbjct: 102605 tcagaatgggtgaccgaccagg 102584
>gb|AC120147.8| Mus musculus chromosome 19, clone RP24-223N20, complete sequence Length = 172853 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 catccatccaaggagcacaaaa 472 |||||||||||||||||||||| Sbjct: 139644 catccatccaaggagcacaaaa 139665
>gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, complete sequence Length = 191988 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1431 aacacttttcaatactatagag 1452 |||||||||||||||||||||| Sbjct: 5563 aacacttttcaatactatagag 5542
>gb|AC162456.3| Mus musculus chromosome 19, clone RP23-406F15, complete sequence Length = 173042 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 catccatccaaggagcacaaaa 472 |||||||||||||||||||||| Sbjct: 166961 catccatccaaggagcacaaaa 166982
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 ccgcgccgaggcgccgtcacagtcgc 288 |||||||| ||||||||||||||||| Sbjct: 1339088 ccgcgccgcggcgccgtcacagtcgc 1339113
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1319 tcagaatgggtgaccgaccagg 1340 |||||||||||||||||||||| Sbjct: 8496966 tcagaatgggtgaccgaccagg 8496987
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence Length = 158297 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2875 caagaaaactgccacttttcat 2896 |||||||||||||||||||||| Sbjct: 92540 caagaaaactgccacttttcat 92561
>emb|Z95331.2|HS941F9 Human DNA sequence from clone CTA-941F9 on chromosome 22q13, complete sequence Length = 127587 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2764 catttgaacaggtagttgaagg 2785 |||||||||||||||||||||| Sbjct: 116057 catttgaacaggtagttgaagg 116078
>gb|AC008699.6| Homo sapiens chromosome 5 clone CTB-73D21, complete sequence Length = 169349 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2035 atgggagaagaaggagaactaaaaaa 2060 ||||||||||| |||||||||||||| Sbjct: 141363 atgggagaagagggagaactaaaaaa 141388
>gb|AC015604.5|AC015604 Homo sapiens, clone RP11-45D18, complete sequence Length = 172914 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2554 tctaaactgcatggacaatgttagag 2579 ||||||||||||| |||||||||||| Sbjct: 139672 tctaaactgcatgtacaatgttagag 139697
>gb|AC073848.4|AC073848 Homo sapiens BAC clone RP11-669M16 from 4, complete sequence Length = 163636 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1351 tatgataggaagaagttgcttcttta 1376 ||||||||||||||||| |||||||| Sbjct: 48220 tatgataggaagaagtttcttcttta 48195
>gb|AC133941.4| Mus musculus BAC clone RP23-466I9 from chromosome 18, complete sequence Length = 185668 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1431 aacacttttcaatactatagag 1452 |||||||||||||||||||||| Sbjct: 101800 aacacttttcaatactatagag 101779
>gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, complete sequence Length = 166967 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 451 catccatccaaggagcacaaaa 472 |||||||||||||||||||||| Sbjct: 113208 catccatccaaggagcacaaaa 113187
>emb|CT009725.15| Mouse DNA sequence from clone RP23-236N13 on chromosome 12, complete sequence Length = 74878 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1874 attatgcacaggctgctgctgc 1895 |||||||||||||||||||||| Sbjct: 2462 attatgcacaggctgctgctgc 2483
>dbj|AB051572.1| Aphis gossypii mRNA for GrpE, complete cds Length = 881 Score = 44.1 bits (22), Expect = 2.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2765 atttgaacaggtagttgaaggt 2786 |||||||||||||||||||||| Sbjct: 645 atttgaacaggtagttgaaggt 666
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2554 tctaaactgcatggacaatgttagag 2579 ||||||||||||| |||||||||||| Sbjct: 133452 tctaaactgcatgtacaatgttagag 133427
>gb|AC027310.5| Homo sapiens chromosome 5 clone CTC-200H6, complete sequence Length = 103446 Score = 44.1 bits (22), Expect = 2.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2035 atgggagaagaaggagaactaaaaaa 2060 ||||||||||| |||||||||||||| Sbjct: 7075 atgggagaagagggagaactaaaaaa 7100 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 582,020,009 Number of extensions: 31587667 Number of successful extensions: 186035 Number of sequences better than 10.0: 41 Number of HSP's gapped: 186022 Number of HSP's successfully gapped: 108 Length of query: 2956 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2933 Effective length of database: 18,503,978,556 Effective search space: 54272169104748 Effective search space used: 54272169104748 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
