| Clone Name | FLbaf148i06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 -... | 32 | 5.3 | 2 | Q6BK66:CCS1_DEBHA Superoxide dismutase 1 copper chaperone - Deba... | 32 | 6.9 |
|---|
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 32.0 bits (71), Expect = 5.3 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 15/91 (16%) Frame = +2 Query: 329 RKPRTKPMMPASLTRXXXXXXXXXXXXXSRATHSLRRQSPRRPPTKRHRRLK-------- 484 R+ R+ PA TR SR+ RR+S R PT+R R + Sbjct: 558 RRGRSHSRSPA--TRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS 615 Query: 485 KAKSPT-------SPRQRQGRNNHPTRRTGR 556 ++++P SP +R+ R+ P RR+GR Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGR 646 Score = 31.6 bits (70), Expect = 6.9 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Frame = +2 Query: 314 QRAKVRKPRTKPMMPASLTRXXXXXXXXXXXXXSRATHSLRRQSPRRPPTKRHRRLK--- 484 +R++ R P + + R SR +RR+S R P +R R + Sbjct: 592 RRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRT 651 Query: 485 -----KAKSPTSPRQRQGRNNHPTRRTGR 556 +++S T R+ + R+ P RR+GR Sbjct: 652 PARRGRSRSRTPARRGRSRSRTPARRSGR 680
>Q6BK66:CCS1_DEBHA Superoxide dismutase 1 copper chaperone - Debaryomyces hansenii| (Yeast) (Torulaspora hansenii) Length = 250 Score = 31.6 bits (70), Expect = 6.9 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = +1 Query: 79 VVLRVSIHCEGCXXXXXXXXXHVDGVFRCDIDARSNRVAVTTSTKIDAGILIARLRKSGK 258 +V V + C+ C ++G+ + DID +SN VTT + ++ ++ +GK Sbjct: 7 IVFAVPMECQSCVDSVSLSLKSLNGISKYDIDLKSN--LVTTEGSVPPSEIVKAIQSTGK 64 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 142,011,234 Number of extensions: 2316338 Number of successful extensions: 6307 Number of sequences better than 10.0: 2 Number of HSP's gapped: 6288 Number of HSP's successfully gapped: 3 Length of query: 403 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 288 Effective length of database: 69,142,514 Effective search space: 19913044032 Effective search space used: 19913044032 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)