ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf148h18 |
|---|---|
| Clone Library Name | barley_pub |
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 275 bits (702), Expect = 4e-73 Identities = 128/182 (70%), Positives = 160/182 (87%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EPPE+AK++VGNLPYDVDSE LA+LF+QAGVVE+AEVIYNR++ QSRGFGFVTMST+EEA Sbjct: 131 EPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEA 190 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 +KA+E +NRYD++GRLL VN+AA+RG R ERPPR F S+R YVGN+PW +D+RL Q+F Sbjct: 191 EKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLF 250 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 SEHG+VV+A +VYDRETGRSRGFGFVTMAS+ ++ AI+ LDGQ +DGR +RVNVA +R Sbjct: 251 SEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRS 310 Query: 896 QR 901 +R Sbjct: 311 RR 312
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 266 bits (680), Expect = 1e-70 Identities = 127/192 (66%), Positives = 162/192 (84%), Gaps = 3/192 (1%) Frame = +2 Query: 335 GDAGYTAE---PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFG 505 G+AG T E P E+AK++VGNLPYD+DSE LAQLF QAGVVE+AEVIYNRE+ +SRGFG Sbjct: 82 GEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFG 141 Query: 506 FVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 FVTMST+EEADKA+E +++YD++GRLL VN+AA RGSR ER PR F ++R YVGN+PW Sbjct: 142 FVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWD 201 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 +D+RL Q+FSEHG+VV+A +V+DRE+GRSRGFGFVTM+S+ ++ AI+ LDGQ +DGR Sbjct: 202 IDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRT 261 Query: 866 LRVNVAAERPQR 901 +RVN A ERP+R Sbjct: 262 IRVNAAEERPRR 273
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 261 bits (667), Expect = 4e-69 Identities = 124/182 (68%), Positives = 153/182 (84%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP EEAK++VGNL YDV+S+ LA LF+QAG VE+AEVIYNRE+ QSRGFGFVTMS+++EA Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 + A+E FNRYD++GRLL VN+AA RGSR ER PR + +FR YVGNLPW ++ RL Q+F Sbjct: 205 ETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLF 264 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 SEHG+VV A +VYDRETGRSRGFGFVTM+ ++L+ AISALDGQ ++GR +RVNVA ERP Sbjct: 265 SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERP 324 Query: 896 QR 901 R Sbjct: 325 PR 326
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 258 bits (659), Expect = 4e-68 Identities = 127/191 (66%), Positives = 155/191 (81%) Frame = +2 Query: 335 GDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 G G++ EPPEEAK++VGNLPYDVDSE+LA +FD AGVVE+AEVIYNRE+ +SRGFGFVT Sbjct: 44 GGQGFS-EPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102 Query: 515 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 694 MST+EEA+KA+E N YD+ GR L VN+AA RGS P F S R YVGNLPW + Sbjct: 103 MSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDT 162 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 SRL Q+FSEHG+VV+A +V DRETGRSRGFGFVTM+S+ +++ AI+ALDGQ +DGR +RV Sbjct: 163 SRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRV 222 Query: 875 NVAAERPQRGF 907 NVA ERP+R F Sbjct: 223 NVAEERPRRAF 233
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 181 bits (459), Expect = 6e-45 Identities = 100/214 (46%), Positives = 133/214 (62%), Gaps = 29/214 (13%) Frame = +2 Query: 353 AEPP---EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMST 523 AE P E+ K++VGNLP+ VDS LA LF++AG VE+ EVIY++ SG+SRGFGFVTMST Sbjct: 79 AEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMST 138 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVE-------------------------- 625 EE + A + FN Y+I GR + VN R Sbjct: 139 KEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGA 198 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R R SS R YVGNL W +D L ++FSE G VV+A +VYDR++GRSRGFGFVT +S Sbjct: 199 RGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 258 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 907 ++++ AI +L+G ++DGR +RV+ A ERP+R F Sbjct: 259 AKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292 Score = 80.5 bits (197), Expect = 1e-14 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 V PR F+ + +VGNLP+ + + L +F G V ++YD+ +GRSRGFGFVTM Sbjct: 78 VAEQPR-FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTM 136 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAAAES 931 ++KE++++A +G E+DGR +RVN A+R F G S Sbjct: 137 STKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNS 183
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 180 bits (456), Expect = 1e-44 Identities = 99/214 (46%), Positives = 133/214 (62%), Gaps = 29/214 (13%) Frame = +2 Query: 353 AEPP---EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMST 523 AE P E+ K++VGNLP+ VDS LA LF++AG VE+ EVIY++ +G+SRGFGFVTMST Sbjct: 78 AEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMST 137 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVE-------------------------- 625 EE + A + FN Y+I GR + VN R Sbjct: 138 KEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGA 197 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R R SS R YVGNL W +D L ++FSE G VV+A +VYDR++GRSRGFGFVT +S Sbjct: 198 RGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 257 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 907 ++++ AI +L+G ++DGR +RV+ A ERP+R F Sbjct: 258 SKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQF 291 Score = 82.4 bits (202), Expect = 3e-15 Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 V PR F+ + +VGNLP+ + + L +F G V ++YD+ TGRSRGFGFVTM Sbjct: 77 VAEQPR-FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTM 135 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAAAES 931 ++KE++++A +G E+DGR +RVN A+R F G S Sbjct: 136 STKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNS 182
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 178 bits (452), Expect = 4e-44 Identities = 95/198 (47%), Positives = 130/198 (65%), Gaps = 9/198 (4%) Frame = +2 Query: 335 GDAGYTAEP--PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 GD G E + K++VGNLP+ DS LA+LF++AG VE+ EVIY++ +G+SRGFGF Sbjct: 73 GDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGF 132 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPR-------QFASSFRAYV 667 VTMS+ EE + A + FN Y++ GR L VN R R F SS R YV Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYV 192 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 GNL W + L +FSE G+VV+A +VYDR++GRSRGFGFVT +S E++++AI +LDG Sbjct: 193 GNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGV 252 Query: 848 EMDGRPLRVNVAAERPQR 901 +++GR +RV+ A RP R Sbjct: 253 DLNGRAIRVSPAEARPPR 270
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 176 bits (446), Expect = 2e-43 Identities = 94/206 (45%), Positives = 130/206 (63%), Gaps = 25/206 (12%) Frame = +2 Query: 359 PPEEA------KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS 520 PP+E K++VGNLP++VDS +LAQLF+ AG VE+ EVIY++ +G+SRGFGFVTMS Sbjct: 81 PPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMS 140 Query: 521 TIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF--------------- 655 ++ E + A + FN Y++ GR L VN R + R SSF Sbjct: 141 SVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGA 200 Query: 656 ----RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDS 823 R YVGNL W +D L +FSE G+VV A ++YDR++GRS+GFGFVT S +++ + Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260 Query: 824 AISALDGQEMDGRPLRVNVAAERPQR 901 AI +LDG ++DGR +RV+ A RP R Sbjct: 261 AIKSLDGADLDGRQIRVSEAEARPPR 286
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 173 bits (439), Expect = 1e-42 Identities = 94/204 (46%), Positives = 130/204 (63%), Gaps = 15/204 (7%) Frame = +2 Query: 335 GDAGYTAEP--PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 GD G E + K++VGNL + DS LA+LF++AG VE+ EVIY++ +G+SRGFGF Sbjct: 73 GDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGF 132 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQ-------------FAS 649 VTMS+ EE + A + FN Y++ GR L VN R R+ F S Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDS 192 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 S R YVGNL W + L +FSE G+VV+A +VYDR++GRSRGFGFVT +S E++++AI Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI 252 Query: 830 SALDGQEMDGRPLRVNVAAERPQR 901 +LDG +++GR +RV+ A RP R Sbjct: 253 ESLDGVDLNGRAIRVSPAEARPPR 276
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 142 bits (358), Expect = 3e-33 Identities = 72/189 (38%), Positives = 118/189 (62%), Gaps = 9/189 (4%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 +E E ++YVGNLP+ + S +L+++F +AG V E++Y+R + +SRGF FVTM ++EE Sbjct: 108 SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEE 167 Query: 533 ADKAIETFNRYDISGRLLNVN-----RAAQR---GSRVERPPRQFASS-FRAYVGNLPWQ 685 A +AI F+ + GR + VN R +R +++ + F S + YV NL W Sbjct: 168 AKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWA 227 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 L F++ ++A ++YDR +GRSRGFGF+T +S E ++SA+ ++ E++GRP Sbjct: 228 LTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRP 287 Query: 866 LRVNVAAER 892 LR+NVA ++ Sbjct: 288 LRLNVAGQK 296 Score = 84.7 bits (208), Expect = 7e-16 Identities = 46/123 (37%), Positives = 63/123 (51%) Frame = +2 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 688 + +ST +E D L+ + + ER + R YVGNLP+ Sbjct: 66 IFLSTCASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSM 125 Query: 689 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 868 S+L ++F+E G V N IVYDR T RSRGF FVTM S E+ AI DG ++ GR + Sbjct: 126 TSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTV 185 Query: 869 RVN 877 +VN Sbjct: 186 KVN 188
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 127 bits (318), Expect = 1e-28 Identities = 68/191 (35%), Positives = 116/191 (60%), Gaps = 6/191 (3%) Frame = +2 Query: 329 SGGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 S A +++ ++YVGN+P +++++ L + ++ G +E+AEV+Y++ SG+SR FGF Sbjct: 70 SSSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGF 129 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQ--RG---SRVERPPRQFASS-FRAYVG 670 VTM T+E+A+ IE N +I GR + VN + G + + QF S ++ Y+G Sbjct: 130 VTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIG 189 Query: 671 NLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE 850 NL + L FSE G+V+ A + T +S GFGFV+ +S+E++++AI AL+ Sbjct: 190 NLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSV 249 Query: 851 MDGRPLRVNVA 883 ++G+ +RVN A Sbjct: 250 LEGQKIRVNKA 260
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 113 bits (283), Expect = 1e-24 Identities = 61/185 (32%), Positives = 104/185 (56%), Gaps = 5/185 (2%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E E A ++VG L + +D E L + F+ G V A VIY R + +SRG+G+V A Sbjct: 163 ETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYA 222 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFAS-----SFRAYVGNLPWQAEDSR 700 +KAI+ +I GR +N + + + + ++F S ++GNL + A+ Sbjct: 223 EKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDA 282 Query: 701 LVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 880 + ++F++HGEVV+ I ET + +GFG+V ++ ED A+ AL G+ +D RP+R++ Sbjct: 283 IFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDF 342 Query: 881 AAERP 895 ++ RP Sbjct: 343 SSPRP 347
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 107 bits (266), Expect = 1e-22 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 1/238 (0%) Frame = +2 Query: 341 AGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS 520 AG +E ++A VYVG L V L +LF QAG V + +R +GQ +G+GFV Sbjct: 3 AGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFL 62 Query: 521 TIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSR 700 + E+AD AI+ N + G+ + VN+A+ ++ ++GNL + ++ Sbjct: 63 SEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLD-------VGANIFIGNLDPEIDEKL 115 Query: 701 LVQMFSEHGEVVNA-TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 877 L FS G ++ I+ D +TG S+G+ F+ AS + D+AI A++GQ + RP+ V+ Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVS 175 Query: 878 VAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQKTEACHHLKLPH*PPDAGSPPI 1051 A ++ +G G+AAE + A+ L + + H L PP + P+ Sbjct: 176 YAFKKDSKGERHGSAAERLL---------AAQNPLSQADRPHQLFADAPPPPSAPNPV 224
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 105 bits (261), Expect = 5e-22 Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E +YV NLP DVD + L LF Q G + +V+ + SG SR FGFV Sbjct: 180 EAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 EEA KA+ N ++SGRLL RA +R R R+F YV Sbjct: 239 EKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D +L + FS +G + +A ++ E G S+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVGTKPLYVALAQRKEER 374 Score = 80.1 bits (196), Expect = 2e-14 Identities = 52/175 (29%), Positives = 85/175 (48%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V + SRGFGFV T E A +AI T Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINTM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R + YV NLP ++ L +FS+ G+++ Sbjct: 159 NGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKML 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G SR FGFV E+ A+ ++G+E+ GR L A +R +R Sbjct: 219 SVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVER 272 Score = 60.8 bits (146), Expect = 1e-08 Identities = 47/185 (25%), Positives = 85/185 (45%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ ++ +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N + G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFEMLKGQPIRI-MWSQRD-----PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ + D SRGFGFV + E AI+ ++G ++ R + V R +R Sbjct: 125 ILSCKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAE 182 Query: 911 CGAAA 925 GA A Sbjct: 183 LGARA 187
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 103 bits (258), Expect = 1e-21 Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A+ E VY+ N +VD E L +LF Q G +V+ + +G+S+GFGFV+ Sbjct: 180 EAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSY 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A+KA+E N +ISG+++ V RA ++ R R+F Y+ Sbjct: 239 EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYI 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D +L + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVGSKPLYVALAQRKEER 374 Score = 85.1 bits (209), Expect = 5e-16 Identities = 52/175 (29%), Positives = 93/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V++ NL +D++ L F G + +V+ + E+G S+G+ FV T E ADKAIE Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYAFVHFETQEAADKAIEKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N + +D L ++FS+ G+ + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D G+S+GFGFV+ ED + A+ ++G+E+ G+ + V A ++ +R Sbjct: 219 SVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVER 272 Score = 49.7 bits (117), Expect = 3e-05 Identities = 30/89 (33%), Positives = 47/89 (52%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +Y+ NL +D E+L + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N + + L V A ++ R Q+ Sbjct: 354 NGRIVGSKPLYVALAQRKEERKAHLTNQY 382
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 103 bits (257), Expect = 1e-21 Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 10/195 (5%) Frame = +2 Query: 347 YTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTI 526 Y A+ E VY+ N D+D +RL ++F G +V+ + ++G+SRGFGFV Sbjct: 183 YGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNH 241 Query: 527 EEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYVGNL 676 EEA KA+ N +++GR++ V RA +R R R+F YV NL Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 +D RL + FS +G + +A ++ E G S+GFGFV +S E+ A++ ++G+ + Sbjct: 302 DDGIDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVS 359 Query: 857 GRPLRVNVAAERPQR 901 +PL V +A + +R Sbjct: 360 TKPLYVALAQRKEER 374 Score = 91.7 bits (226), Expect = 6e-18 Identities = 55/175 (31%), Positives = 92/175 (52%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V++ NL +D++ L F G + +V+ + SRG+GFV T E A++AI+T Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R + Y+ N +D RL ++FS G + Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +TGRSRGFGFV + E+ A+S ++G+E++GR + V A +R +R Sbjct: 219 SVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272 Score = 64.3 bits (155), Expect = 1e-09 Identities = 48/183 (26%), Positives = 86/183 (46%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ ++ +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I GR + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFEVIKGRPIRI-MWSQRD-----PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D SRG+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELE 182 Query: 911 CGA 919 GA Sbjct: 183 YGA 185
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 103 bits (256), Expect = 2e-21 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 10/195 (5%) Frame = +2 Query: 347 YTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTI 526 Y A+ E VY+ N D+D +RL ++F G +V+ + +SG+SRGFGFV Sbjct: 183 YGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNH 241 Query: 527 EEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYVGNL 676 EEA KA+ N +++GR++ V RA +R R R+F YV NL Sbjct: 242 EEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNL 301 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 +D RL + F +G + +A ++ E G S+GFGFV +S E+ A++ ++G+ + Sbjct: 302 DDGIDDDRLRKEFLPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVS 359 Query: 857 GRPLRVNVAAERPQR 901 +PL V +A + +R Sbjct: 360 TKPLYVALAQRKEER 374 Score = 90.1 bits (222), Expect = 2e-17 Identities = 54/175 (30%), Positives = 92/175 (52%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V++ NL +D++ L F G + +V+ + SRG+GFV T E A++AI+T Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R + Y+ N +D RL ++FS G + Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D ++GRSRGFGFV + E+ A+S ++G+E++GR + V A +R +R Sbjct: 219 SVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272 Score = 60.8 bits (146), Expect = 1e-08 Identities = 46/183 (25%), Positives = 84/183 (45%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +Y+G+L DV L + F AG + V + + +S + ++ +A++A++ Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I GR + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFEVIKGRPIRI-MWSQRD-----PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D SRG+GFV + E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELE 182 Query: 911 CGA 919 GA Sbjct: 183 YGA 185
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 102 bits (255), Expect = 2e-21 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL +LF + G +V+ + ESG+S+GFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N +++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 87.0 bits (214), Expect = 1e-16 Identities = 51/175 (29%), Positives = 94/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AIE Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N +D RL ++F + G + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + V A ++ +R Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 63.5 bits (153), Expect = 2e-09 Identities = 50/186 (26%), Positives = 90/186 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 51.6 bits (122), Expect = 7e-06 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 102 bits (255), Expect = 2e-21 Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL +LF + G +V+ + ESG+S+GFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N +++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 85.5 bits (210), Expect = 4e-16 Identities = 50/175 (28%), Positives = 94/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AIE Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R + R + Y+ N +D RL ++F + G + Sbjct: 159 NGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + V A ++ +R Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 62.0 bits (149), Expect = 5e-09 Identities = 49/186 (26%), Positives = 90/186 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V + +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 51.6 bits (122), Expect = 7e-06 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 102 bits (253), Expect = 4e-21 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL LF + G +V+ + ESG+S+GFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N +++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 86.3 bits (212), Expect = 2e-16 Identities = 51/175 (29%), Positives = 93/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AIE Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N +D RL +F + G + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + V A ++ +R Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 62.0 bits (149), Expect = 5e-09 Identities = 49/186 (26%), Positives = 89/186 (47%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L D L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 51.6 bits (122), Expect = 7e-06 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 102 bits (253), Expect = 4e-21 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL LF + G +V+ + ESG+S+GFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N +++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 86.3 bits (212), Expect = 2e-16 Identities = 51/175 (29%), Positives = 93/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AIE Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N +D RL +F + G + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + V A ++ +R Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 63.5 bits (153), Expect = 2e-09 Identities = 50/186 (26%), Positives = 90/186 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 51.6 bits (122), Expect = 7e-06 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 102 bits (253), Expect = 4e-21 Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL LF + G +V+ + ESG+S+GFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N +++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 86.3 bits (212), Expect = 2e-16 Identities = 51/175 (29%), Positives = 93/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AIE Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N +D RL +F + G + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D E+G+S+GFGFV+ ED A+ ++G+E++G+ + V A ++ +R Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 63.5 bits (153), Expect = 2e-09 Identities = 50/186 (26%), Positives = 90/186 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 51.6 bits (122), Expect = 7e-06 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 101 bits (252), Expect = 6e-21 Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL + F Q G +V+ + + G+SRGFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N D++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + F+ G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFTPFGSITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 83.2 bits (204), Expect = 2e-15 Identities = 49/175 (28%), Positives = 93/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N +D RL + F ++G + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D + G+SRGFGFV+ ED A+ ++G++++G+ + V A ++ +R Sbjct: 219 SVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVER 272 Score = 63.5 bits (153), Expect = 2e-09 Identities = 50/186 (26%), Positives = 90/186 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 50.4 bits (119), Expect = 1e-05 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFTPFGSITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 101 bits (252), Expect = 6e-21 Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 10/195 (5%) Frame = +2 Query: 347 YTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTI 526 Y A+ E VY+ N D+D +RL ++F G +V+ + SG+SRGFGFV Sbjct: 183 YGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNH 241 Query: 527 EEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYVGNL 676 EEA KA+ N +++GR++ V RA +R R R+F YV NL Sbjct: 242 EEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNL 301 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 +D RL + FS +G + + ++ E G S+GFGFV +S E+ A++ ++G+ + Sbjct: 302 DDGIDDDRLRKEFSPYGTITSTKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVS 359 Query: 857 GRPLRVNVAAERPQR 901 +PL V +A + +R Sbjct: 360 TKPLYVALAQRKEER 374 Score = 87.0 bits (214), Expect = 1e-16 Identities = 53/175 (30%), Positives = 91/175 (52%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V++ NL +D++ L F G + +V+ + SRG+GFV T E A++AI+T Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R + Y+ N +D RL ++FS G + Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +GRSRGFGFV + E+ A++ ++G+E++GR + V A +R +R Sbjct: 219 SVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIER 272 Score = 64.3 bits (155), Expect = 1e-09 Identities = 49/183 (26%), Positives = 89/183 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +Y+G+L DV L + F AG + V + + +S G+ ++ +A++A++ Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I GR + + +QR P + + ++ NL ++ L FS G+ Sbjct: 71 TMNFEVIKGRPIRI-MWSQRD-----PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGD 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G SRG+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-EYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELE 182 Query: 911 CGA 919 GA Sbjct: 183 YGA 185
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 100 bits (250), Expect = 9e-21 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D+D ERL LF + G +V+ + ESG+S+GFGFV+ Sbjct: 180 EAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASS----------FRAYV 667 E+A KA++ N +++G+ + V RA ++ R R F YV Sbjct: 239 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + FS G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 60.1 bits (144), Expect = 2e-08 Identities = 49/186 (26%), Positives = 86/186 (46%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + + + + S + +V ++A+ A++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I G+ + + +QR P + + +V NL + L S G Sbjct: 71 TMNFDVIKGKPVRI-MWSQRD-----PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV + E + AI ++G ++GR + V R +R Sbjct: 125 ILSCNVVCD-ENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 100 bits (249), Expect = 1e-20 Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 10/190 (5%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P VYV NLP ++ + L + F + GV+ A V+ +SG SR FGFV E A Sbjct: 226 PRFTNVYVKNLPKEIGEDELRKTFGKFGVISSA-VVMRDQSGNSRCFGFVNFECTEAAAS 284 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAE 691 A+E N + +L V RA ++ R E R+F + Y+ NL + Sbjct: 285 AVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVD 344 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 D +L +MFSE+G V ++ ++ + + G SRGFGFV ++ E+ A+S ++G+ + +PL Sbjct: 345 DEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLY 403 Query: 872 VNVAAERPQR 901 + +A + R Sbjct: 404 IALAQRKEDR 413 Score = 69.3 bits (168), Expect = 3e-11 Identities = 46/178 (25%), Positives = 84/178 (47%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +++ NL +D++ L + F G + +V + +G+S+G+GFV E A AI Sbjct: 135 KGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAI 193 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + N ++ + + V +R R YV NLP + + L + F + G Sbjct: 194 DKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFG 253 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + +A ++ D ++G SR FGFV E SA+ ++G + L V A ++ +R Sbjct: 254 VISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSER 310
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 100 bits (248), Expect = 2e-20 Identities = 62/186 (33%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 VYV N D D E+L + F+ G + +V+ ++E G+S+GFGFV T E A+ A++ Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 557 NRYDIS-GRLLNVNRAAQRGSRVERPPRQFAS----------SFRAYVGNLPWQAEDSRL 703 N D+ G+ L V RA ++ R + R+F YV NL +D RL Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 FS +G + +A ++ D E GRS+GFGFV + + A++ L+G+ + +PL V +A Sbjct: 304 RIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362 Query: 884 AERPQR 901 + +R Sbjct: 363 QRKEER 368 Score = 80.5 bits (197), Expect = 1e-14 Identities = 49/176 (27%), Positives = 94/176 (53%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V++ NL +D++ + F G + +V + E G S+G+GFV T E A+ +I+ Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKV 150 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++G+ + V + R R + + YV N +D +L + F +G++ Sbjct: 151 NGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKIT 210 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM-DGRPLRVNVAAERPQR 901 + ++ +E G+S+GFGFV + E ++A+ AL+G++M +G+ L V A ++ +R Sbjct: 211 SYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAER 265 Score = 66.2 bits (160), Expect = 3e-10 Identities = 44/177 (24%), Positives = 87/177 (49%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+LP DV+ L F AG V V + + +S G+ +V +A++A++ Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N + + + + +QR + R + ++ NL ++ + FS G Sbjct: 62 TMNFDLVRNKPIRI-MWSQRDPSLRR-----SGVGNVFIKNLDRAIDNKAIYDTFSAFGN 115 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +++ + D E G S+G+GFV ++E +++I ++G ++G+ + V R +R Sbjct: 116 ILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 98.2 bits (243), Expect = 6e-20 Identities = 43/86 (50%), Positives = 64/86 (74%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S R YVGNL W +D L +F+E G+VV A ++YDR++GRS+GFGFVT++S +++ A Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314 Query: 827 ISALDGQEMDGRPLRVNVAAERPQRG 904 I++L+G ++DGR +RV+ A RP RG Sbjct: 315 INSLNGADLDGRQIRVSEAEARPPRG 340 Score = 91.3 bits (225), Expect = 8e-18 Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 3/93 (3%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + K++VGNL ++VDS +LAQLF+ AG VE+ EVIY++ +G+SRGFGFVTMST E + A Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVE---RPPR 637 + FN Y+ GR L VN R E R PR Sbjct: 158 QQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190 Score = 83.2 bits (204), Expect = 2e-15 Identities = 39/94 (41%), Positives = 59/94 (62%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 VER F+ + +VGNL + + ++L Q+F G V ++YD+ TGRSRGFGFVTM Sbjct: 90 VER--NSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTM 147 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 ++ ++++A +G E +GRPLRVN P+R Sbjct: 148 STAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKR 181 Score = 79.3 bits (194), Expect = 3e-14 Identities = 39/82 (47%), Positives = 55/82 (67%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 ++YVGNL + VD L LF++ G V A VIY+R+SG+S+GFGFVT+S+ +E KAI + Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317 Query: 554 FNRYDISGRLLNVNRAAQRGSR 619 N D+ GR + V+ A R R Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 96.7 bits (239), Expect = 2e-19 Identities = 64/199 (32%), Positives = 101/199 (50%), Gaps = 1/199 (0%) Frame = +2 Query: 341 AGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS 520 AG E ++A +YVG L V L +L QAG V + +R + +GFGFV Sbjct: 3 AGPIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFM 62 Query: 521 TIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSR 700 E+AD AI+ N + G+ + VN+A+ ++ +VGNL + ++ Sbjct: 63 GEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMD-------VGANIFVGNLDPEVDEKL 115 Query: 701 LVQMFSEHGEVVNA-TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 877 L FS G ++ I+ D ++G S+GF F+ AS E D+A+ A++GQ + R + V+ Sbjct: 116 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVS 175 Query: 878 VAAERPQRGF*CGAAAESM 934 A +R +G G AAE M Sbjct: 176 YAFKRDSKGERHGTAAERM 194
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 95.9 bits (237), Expect = 3e-19 Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 +A A E VY+ N D++ ERL ++F + G +V+ + ++G+S+GFGFV+ Sbjct: 180 EAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSF 238 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA----------SSFRAYV 667 E+A KA++ N D++G+ + V RA ++ R R+F YV Sbjct: 239 ERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 298 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL +D RL + F G + +A ++ E GRS+GFGFV +S E+ A++ ++G+ Sbjct: 299 KNLDDGIDDERLRKEFLPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGR 356 Query: 848 EMDGRPLRVNVAAERPQR 901 + +PL V +A + +R Sbjct: 357 IVATKPLYVALAQRKEER 374 Score = 85.1 bits (209), Expect = 5e-16 Identities = 50/175 (28%), Positives = 93/175 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D++ L F G + +V+ + E+G S+G+GFV T E A++AI+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKM 158 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ R + V R R R + Y+ N D RL +MF ++G + Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPAL 218 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D + G+S+GFGFV+ ED A+ ++G++M+G+ + V A ++ +R Sbjct: 219 SVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVER 272 Score = 65.5 bits (158), Expect = 4e-10 Identities = 51/186 (27%), Positives = 90/186 (48%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L DV L + F AG + V + + +S G+ +V +A++A++ Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T N I GR + + +QR P + + ++ NL ++ L FS G Sbjct: 71 TMNFDVIKGRPVRI-MWSQRD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF* 910 +++ +V D E G S+G+GFV ++E + AI ++G ++ R + V R +R Sbjct: 125 ILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182 Query: 911 CGAAAE 928 GA A+ Sbjct: 183 LGARAK 188 Score = 50.1 bits (118), Expect = 2e-05 Identities = 32/89 (35%), Positives = 48/89 (53%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV NL +D ERL + F G + A+V+ E G+S+GFGFV S+ EEA KA+ Sbjct: 296 LYVKNLDDGIDDERLRKEFLPFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEM 353 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF 643 N ++ + L V A ++ R Q+ Sbjct: 354 NGRIVATKPLYVALAQRKEERQAHLTNQY 382
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 94.7 bits (234), Expect = 7e-19 Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 11/191 (5%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E V+VG L ++VD + L Q F++ G + A VI + +SG+S+G+G+V T E A A Sbjct: 261 ETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAA 320 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF---------RAYVGNLPWQAEDS 697 + +I GR++N++ + R + + +Q A +F +VGNL + A + Sbjct: 321 VAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFNATED 380 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA--LDGQEMDGRPLR 871 L F G++ + + D ++GR +GFG+VT + D+DSA ++G + GRP R Sbjct: 381 DLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFS---DIDSAKKCVEMNGHFIAGRPCR 437 Query: 872 VNVAAERPQRG 904 ++ + R G Sbjct: 438 LDFSTPRTGGG 448 Score = 70.1 bits (170), Expect = 2e-11 Identities = 30/97 (30%), Positives = 59/97 (60%) Frame = +2 Query: 605 QRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGF 784 +R +++ +P + + +VG L W +D L Q F E+G +V A ++ D ++GRS+G+ Sbjct: 247 ERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGY 306 Query: 785 GFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 G+V + E +A++A +E+DGR + ++++ RP Sbjct: 307 GYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRP 343
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 94.0 bits (232), Expect = 1e-18 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 10/190 (5%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P VYV NLP ++ + L + F + G + A V+ +SG SR FGFV + E A Sbjct: 222 PSFTNVYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAV 280 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAE 691 A+E N + +L V RA ++ R E R+F Y+ NL Sbjct: 281 AVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVN 340 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 D +L +MFSE+G V + ++ + + G SRGFGFV ++ E+ A+ ++G+ + +PL Sbjct: 341 DEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLY 399 Query: 872 VNVAAERPQR 901 V +A + +R Sbjct: 400 VALAQRKEER 409 Score = 76.6 bits (187), Expect = 2e-13 Identities = 49/178 (27%), Positives = 85/178 (47%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + V++ NL +D++ L + F G + +V + G+S+G+GFV E A AI Sbjct: 131 KGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAI 189 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + N ++ + + V +R R S YV NLP + D L + F ++G Sbjct: 190 DKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYG 249 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 ++ +A ++ D ++G SR FGFV S E A+ ++G + L V A ++ R Sbjct: 250 DISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDR 306 Score = 65.1 bits (157), Expect = 6e-10 Identities = 44/177 (24%), Positives = 83/177 (46%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 + +YVG+L V+ L LF+Q V V + + +S G+ +V + E+A +A+E Sbjct: 45 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAME 103 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 + N I R + + + + P + + ++ NL ++ L + FS G Sbjct: 104 SLNYAPIRDRPIRIMLSNR------DPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGT 157 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +++ + D GRS+G+GFV +E +AI L+G ++ + + V R R Sbjct: 158 ILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 92.4 bits (228), Expect = 3e-18 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 2/190 (1%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 D+G T + + + V LP ++ E L LF G +E +++ ++ +GQS G+GFV Sbjct: 30 DSGNTED--SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDS 697 ++A+KAI T N + + + V+ A RP YV LP Sbjct: 88 IDPKDAEKAINTLNGLRLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQK 139 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLR 871 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ Sbjct: 140 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPIT 199 Query: 872 VNVAAERPQR 901 V A Q+ Sbjct: 200 VKFANNPSQK 209 Score = 65.5 bits (158), Expect = 4e-10 Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 57/235 (24%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS--------- 520 +A +YV LP + + L QLF Q G + + ++ ++ +G SRG GF+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 521 ---------------TIEEADKAIETFNRYDISGRLLNVNRA-----AQRGSRVERP--- 631 T++ A+ + N+ +S + NR AQ+ R Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLL 243 Query: 632 -------------------------PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 P + + +V NL A++S L QMF G V Sbjct: 244 NMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVT 303 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 N ++ D T + +GFGFVTM + ++ AI++L+G + R L+V+ + + Sbjct: 304 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 92.4 bits (228), Expect = 3e-18 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 2/190 (1%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 D+G T + + + V LP ++ E L LF G +E +++ ++ +GQS G+GFV Sbjct: 30 DSGNTED--SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDS 697 ++A+KAI T N + + + V+ A RP YV LP Sbjct: 88 IDPKDAEKAINTLNGLRLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQK 139 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLR 871 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ Sbjct: 140 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPIT 199 Query: 872 VNVAAERPQR 901 V A Q+ Sbjct: 200 VKFANNPSQK 209 Score = 57.8 bits (138), Expect = 9e-08 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 58/236 (24%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSR--GF------------- 502 +A +YV LP + + L QLF Q G + + ++ ++ +G SR GF Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 503 ---------GFVTMSTIEEADKAIETFNRYDISGRLLNVNRA-----AQRGSRVERP--- 631 G T++ A+ + N+ +S + NR AQ+ R Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLL 243 Query: 632 --------------------------PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 P + + +V NL A++S L QMF G V Sbjct: 244 NMAYGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAV 303 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 N ++ D T + +GFGFVTM + ++ AI++L+G + R L+V+ + + Sbjct: 304 TNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 359
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 92.4 bits (228), Expect = 3e-18 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 2/190 (1%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 D+G T + + + V LP ++ E L LF G +E +++ ++ +GQS G+GFV Sbjct: 30 DSGNTED--SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNY 87 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDS 697 ++A+KAI T N + + + V+ A RP YV LP Sbjct: 88 IDPKDAEKAINTLNGLRLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQK 139 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLR 871 L Q+FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ Sbjct: 140 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPIT 199 Query: 872 VNVAAERPQR 901 V A Q+ Sbjct: 200 VKFANNPSQK 209 Score = 65.5 bits (158), Expect = 4e-10 Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 57/235 (24%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS--------- 520 +A +YV LP + + L QLF Q G + + ++ ++ +G SRG GF+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 521 ---------------TIEEADKAIETFNRYDISGRLLNVNRA-----AQRGSRVERP--- 631 T++ A+ + N+ +S + NR AQ+ R Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLL 243 Query: 632 -------------------------PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 P + + +V NL A++S L QMF G V Sbjct: 244 NMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVT 303 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 N ++ D T + +GFGFVTM + ++ AI++L+G + R L+V+ + + Sbjct: 304 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 91.7 bits (226), Expect = 6e-18 Identities = 51/174 (29%), Positives = 97/174 (55%), Gaps = 2/174 (1%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL + + L Q F G + +++ ++ + ++ + FV +A+ A++T Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQTL 135 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFAS--SFRAYVGNLPWQAEDSRLVQMFSEHGE 730 N I ++ +N A Q +Q +S +F +VG+L +D L F + Sbjct: 136 NGKQIENNIVKINWAFQS--------QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPS 187 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 ++ +++D +TG SRG+GFV+ S++D +A+ ++ GQ+++GRPLR+N AA+R Sbjct: 188 YLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241 Score = 32.0 bits (71), Expect = 5.4 Identities = 22/94 (23%), Positives = 36/94 (38%) Frame = +2 Query: 359 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 PP Y+GN+P+ L LF G I + + +G F+ T E+A Sbjct: 337 PPRVTTAYIGNIPHFATEADLIPLFQNFG------FILDFKHYPEKGCCFIKYDTHEQAA 390 Query: 539 KAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQ 640 I + GR L +R + + + +Q Sbjct: 391 VCIVALANFPFQGRNLRTGWGKERSNFMPQQQQQ 424 Score = 32.0 bits (71), Expect = 5.4 Identities = 22/78 (28%), Positives = 33/78 (42%) Frame = +2 Query: 659 AYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISAL 838 AY+GN+P A ++ L+ +F G + D + +G F+ + E I AL Sbjct: 343 AYIGNIPHFATEADLIPLFQNFG------FILDFKHYPEKGCCFIKYDTHEQAAVCIVAL 396 Query: 839 DGQEMDGRPLRVNVAAER 892 GR LR ER Sbjct: 397 ANFPFQGRNLRTGWGKER 414
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 90.9 bits (224), Expect = 1e-17 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V N+ D+D E+L +LF + G E +VI + SG+S+GFGFV T E A KA+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAEDSRLV 706 + I G++L V RA ++ R+ R+F Y+ NL D +L Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL V + Sbjct: 320 EEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQ 377 Query: 887 ER 892 R Sbjct: 378 AR 379 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D+ L LF G + +V+ + S+G+ +V ++ A++AI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 557 NRYDISGRLLNVNRAAQRGSRV-ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N ++ R + V R R E R A+ +V N+ +D +L ++F E+G Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 225 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L V A ++ +R Sbjct: 226 ESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 32.0 bits (71), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + L + F G + I D T G+G+V D + A++ ++ Sbjct: 21 YVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80 Query: 842 GQEMDGRPLRV 874 ++G+P R+ Sbjct: 81 FDLINGKPFRL 91
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 90.9 bits (224), Expect = 1e-17 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A + + V LP ++ + LF G +E +++ ++ +GQS G+GFV S + Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPND 92 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 ADKAI T N + + + V+ A RP YV LP + Q+ Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMSQKEMEQL 144 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAA 886 FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V A Sbjct: 145 FSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFAN 204 Query: 887 ERPQR 901 Q+ Sbjct: 205 NPSQK 209 Score = 54.7 bits (130), Expect = 8e-07 Identities = 27/80 (33%), Positives = 47/80 (58%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +V NL +A++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+ Sbjct: 287 FVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLN 346 Query: 842 GQEMDGRPLRVNVAAERPQR 901 G + R L+V+ + + Sbjct: 347 GYRLGERVLQVSFKTSKQHK 366 Score = 51.2 bits (121), Expect = 9e-06 Identities = 28/73 (38%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++V NL + D L QLF G V +VI + + + +GFGFVTM+ +EA AI + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 346 NGYRLGERVLQVS 358
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 90.9 bits (224), Expect = 1e-17 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 2/190 (1%) Frame = +2 Query: 335 GDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 GD G T + V LP ++ + L LF G VE A++I ++ +G S G+GFV Sbjct: 15 GDIGRT-------NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVN 67 Query: 515 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 694 T ++A++AI T N + + + V+ A RP + Y+ LP Sbjct: 68 YVTAKDAERAINTLNGLRLQSKTIKVSYA--------RPSSEVIKDANLYISGLPRTMTQ 119 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPL 868 + MFS G ++N+ ++ D+ TG SRG F+ + + + AI++ +G + G P+ Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPI 179 Query: 869 RVNVAAERPQ 898 V AA Q Sbjct: 180 TVKFAANPNQ 189 Score = 72.0 bits (175), Expect = 5e-12 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 44/228 (19%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 ++E ++A +Y+ LP + + + +F + G + + V+ ++ +G SRG F+ Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158 Query: 530 EADKAIETFNRYDISGR-------------------LLN-------------VNRAAQR- 610 EA++AI +FN + G LL+ V+ AQR Sbjct: 159 EAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLYHSPARRFGGPVHHQAQRF 218 Query: 611 -----------GSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYD 757 G P +S + ++ NL A++ L QMF G V N ++ D Sbjct: 219 RFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 278 Query: 758 RETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 T + +GFGFVTM + E+ AI++L+G + + L+V+ + + Sbjct: 279 FNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK 326
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 90.5 bits (223), Expect = 1e-17 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V N+ D+D E+L +LF + G E +VI + SG+S+GFGFV T E A KA+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAEDSRLV 706 + I G++L V RA ++ R+ R+F Y+ NL D +L Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL V + Sbjct: 320 EEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377 Query: 887 ER 892 R Sbjct: 378 AR 379 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D+ L LF G + +V+ + S+G+ +V ++ A++AI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 557 NRYDISGRLLNVNRAAQRGSRV-ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N ++ R + V R R E R A+ +V N+ +D +L ++F E+G Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 225 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L V A ++ +R Sbjct: 226 ESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 32.0 bits (71), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + L + F G + I D T G+G+V D + A++ ++ Sbjct: 21 YVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80 Query: 842 GQEMDGRPLRV 874 ++G+P R+ Sbjct: 81 FDLINGKPFRL 91
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 90.5 bits (223), Expect = 1e-17 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V N+ D+D E+L +LF + G E +VI + SG+S+GFGFV T E A KA+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAEDSRLV 706 + I G++L V RA ++ R+ R+F Y+ NL D +L Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL V + Sbjct: 320 EEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377 Query: 887 ER 892 R Sbjct: 378 AR 379 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D+ L LF G + +V+ + S+G+ +V ++ A++AI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 557 NRYDISGRLLNVNRAAQRGSRV-ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N ++ R + V R R E R A+ +V N+ +D +L ++F E+G Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 225 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L V A ++ +R Sbjct: 226 ESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 32.0 bits (71), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + L + F G + I D T G+G+V D + A++ ++ Sbjct: 21 YVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80 Query: 842 GQEMDGRPLRV 874 ++G+P R+ Sbjct: 81 FDLINGKPFRL 91
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 90.5 bits (223), Expect = 1e-17 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V N+ D+D E+L +LF + G E +VI + SG+S+GFGFV T E A KA+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAEDSRLV 706 + I G++L V RA ++ R+ R+F Y+ NL D +L Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL V + Sbjct: 320 EEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377 Query: 887 ER 892 R Sbjct: 378 AR 379 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D+ L LF G + +V+ + S+G+ +V ++ A++AI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 557 NRYDISGRLLNVNRAAQRGSRV-ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N ++ R + V R R E R A+ +V N+ +D +L ++F E+G Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 225 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L V A ++ +R Sbjct: 226 ESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 32.0 bits (71), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + L + F G + I D T G+G+V D + A++ ++ Sbjct: 21 YVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80 Query: 842 GQEMDGRPLRV 874 ++G+P R+ Sbjct: 81 FDLINGKPFRL 91
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 90.5 bits (223), Expect = 1e-17 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V N+ D+D E+L +LF + G E +VI + SG+S+GFGFV T E A KA+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAEDSRLV 706 + I G++L V RA ++ R+ R+F Y+ NL D +L Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL V + Sbjct: 320 EEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377 Query: 887 ER 892 R Sbjct: 378 AR 379 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D+ L LF G + +V+ + S+G+ +V ++ A++AI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 557 NRYDISGRLLNVNRAAQRGSRV-ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N ++ R + V R R E R A+ +V N+ +D +L ++F E+G Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 225 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L V A ++ +R Sbjct: 226 ESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 32.0 bits (71), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + L + F G + I D T G+G+V D + A++ ++ Sbjct: 21 YVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80 Query: 842 GQEMDGRPLRV 874 ++G+P R+ Sbjct: 81 FDLINGKPFRL 91
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 90.5 bits (223), Expect = 1e-17 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V N+ D+D E+L +LF + G E +VI + SG+S+GFGFV T E A KA+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQAEDSRLV 706 + I G++L V RA ++ R+ R+F Y+ NL D +L Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + FS G + A ++ E G+ +GFG V +S E+ A+ ++G+ + +PL V + Sbjct: 320 EEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQ 377 Query: 887 ER 892 R Sbjct: 378 AR 379 Score = 70.5 bits (171), Expect = 1e-11 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D+ L LF G + +V+ + S+G+ +V ++ A++AI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 557 NRYDISGRLLNVNRAAQRGSRV-ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N ++ R + V R R E R A+ +V N+ +D +L ++F E+G Sbjct: 166 NGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPT 225 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++ D +G+S+GFGFV + E A+ L G+ +DG+ L V A ++ +R Sbjct: 226 ESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 32.0 bits (71), Expect = 5.4 Identities = 18/71 (25%), Positives = 33/71 (46%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + L + F G + I D T G+G+V D + A++ ++ Sbjct: 21 YVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMN 80 Query: 842 GQEMDGRPLRV 874 ++G+P R+ Sbjct: 81 FDLINGKPFRL 91
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 90.5 bits (223), Expect = 1e-17 Identities = 55/181 (30%), Positives = 95/181 (52%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + + NL Y E L ++F++A ++V + ++G+S+G+ F+ ++ E+A +A Sbjct: 486 ESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAKEA 541 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + N+ +I GR + + RGS P + S +V L + L + F Sbjct: 542 LNSCNKREIEGRAIRLELQGPRGS----PNARSQPSKTLFVKGLSEDTTEETLKESFDGS 597 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + G Sbjct: 598 ---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 654 Query: 905 F 907 F Sbjct: 655 F 655 Score = 68.6 bits (166), Expect = 5e-11 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%) Frame = +2 Query: 389 NLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYD 568 NLPY V + L ++F+ A AE+ + G+S+G ++ T +A+K E + Sbjct: 401 NLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTE 455 Query: 569 ISGRLLNVNRAAQRGS----RVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 I GR +++ ++G R + S + NL + A + L ++F E Sbjct: 456 IDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVF----EKA 511 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 V + G+S+G+ F+ AS ED A+++ + +E++GR +R+ + R Sbjct: 512 TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 563 Score = 57.0 bits (136), Expect = 2e-07 Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 4/185 (2%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAE----VIYNRESGQSRGFGFVTMST 523 EP ++VGNL ++ + L + G+ +V + + G +R FG+V + Sbjct: 304 EPTTAFNLFVGNLNFNKSAPEL-----KTGISDVFAKNDLAVVDVRIGMTRKFGYVDFES 358 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 E+ +KA+E + G + + + + S+ ER R + NLP++ L Sbjct: 359 AEDLEKALE-LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAK------NLPYKVTQDEL 411 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 ++F + E+ + + G+S+G ++ ++ D + G E+DGR + + Sbjct: 412 KEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYT 466 Query: 884 AERPQ 898 E+ Q Sbjct: 467 GEKGQ 471
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 90.5 bits (223), Expect = 1e-17 Identities = 55/181 (30%), Positives = 94/181 (51%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + + NL Y E L ++F++A ++V + + G+S+G+ F+ ++ E+A +A Sbjct: 484 ESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQQGKSKGYAFIEFASFEDAKEA 539 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + N+ +I GR + + RGS P + S +V L + L + F Sbjct: 540 LNSCNKMEIEGRTIRLELQGPRGS----PNARSQPSKTLFVKGLSEDTTEETLKESFEGS 595 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + G Sbjct: 596 ---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 652 Query: 905 F 907 F Sbjct: 653 F 653 Score = 48.5 bits (114), Expect = 6e-05 Identities = 32/140 (22%), Positives = 64/140 (45%) Frame = +2 Query: 482 SGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRA 661 +G +R FG+V + E+ +KA+E + G + + + R S+ R R + Sbjct: 344 TGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAK--- 399 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 NL + + L ++F + E+ + + G+S+G ++ S+ D + + Sbjct: 400 ---NLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQ 451 Query: 842 GQEMDGRPLRVNVAAERPQR 901 G E+DGR + + E+ QR Sbjct: 452 GAEIDGRSVSLYYTGEKGQR 471 Score = 33.9 bits (76), Expect = 1.4 Identities = 24/74 (32%), Positives = 36/74 (48%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 F ++GNL + L SE N V D TG +R FG+V S EDL+ A+ Sbjct: 308 FNLFIGNLNPNKSVAELKVAISEPF-AKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE 366 Query: 833 ALDGQEMDGRPLRV 874 L G ++ G +++ Sbjct: 367 -LTGLKVFGNEIKL 379
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 90.5 bits (223), Expect = 1e-17 Identities = 55/181 (30%), Positives = 95/181 (52%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + + NL Y E L ++F++A ++V + ++G+S+G+ F+ ++ E+A +A Sbjct: 485 ESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAKEA 540 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + N+ +I GR + + RGS P + S +V L + L + F Sbjct: 541 LNSCNKREIEGRAIRLELQGPRGS----PNARSQPSKTLFVKGLSEDTTEETLKESFDGS 596 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + G Sbjct: 597 ---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 653 Query: 905 F 907 F Sbjct: 654 F 654 Score = 68.6 bits (166), Expect = 5e-11 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%) Frame = +2 Query: 389 NLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYD 568 NLPY V + L ++F+ A AE+ + G+S+G ++ T +A+K E + Sbjct: 400 NLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTE 454 Query: 569 ISGRLLNVNRAAQRGS----RVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 I GR +++ ++G R + S + NL + A + L ++F E Sbjct: 455 IDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVF----EKA 510 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 V + G+S+G+ F+ AS ED A+++ + +E++GR +R+ + R Sbjct: 511 TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 562 Score = 57.0 bits (136), Expect = 2e-07 Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 4/185 (2%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAE----VIYNRESGQSRGFGFVTMST 523 EP ++VGNL ++ + L + G+ +V + + G +R FG+V + Sbjct: 303 EPTTAFNLFVGNLNFNKSAPEL-----KTGISDVFAKNDLAVVDVRIGMTRKFGYVDFES 357 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 E+ +KA+E + G + + + + S+ ER R + NLP++ L Sbjct: 358 AEDLEKALE-LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAK------NLPYKVTQDEL 410 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 ++F + E+ + + G+S+G ++ ++ D + G E+DGR + + Sbjct: 411 KEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYT 465 Query: 884 AERPQ 898 E+ Q Sbjct: 466 GEKGQ 470
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 90.5 bits (223), Expect = 1e-17 Identities = 55/181 (30%), Positives = 95/181 (52%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + + NL Y E L ++F++A ++V + ++G+S+G+ F+ ++ E+A +A Sbjct: 484 ESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NQNGKSKGYAFIEFASFEDAKEA 539 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + N+ +I GR + + RGS P + S +V L + L + F Sbjct: 540 LNSCNKREIEGRAIRLELQGPRGS----PNARSQPSKTLFVKGLSEDTTEETLKESFDGS 595 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + G Sbjct: 596 ---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 652 Query: 905 F 907 F Sbjct: 653 F 653 Score = 68.6 bits (166), Expect = 5e-11 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%) Frame = +2 Query: 389 NLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYD 568 NLPY V + L ++F+ A AE+ + G+S+G ++ T +A+K E + Sbjct: 399 NLPYKVTQDELKEVFEDA-----AEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTE 453 Query: 569 ISGRLLNVNRAAQRGS----RVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 I GR +++ ++G R + S + NL + A + L ++F E Sbjct: 454 IDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVF----EKA 509 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 V + G+S+G+ F+ AS ED A+++ + +E++GR +R+ + R Sbjct: 510 TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 561 Score = 57.0 bits (136), Expect = 2e-07 Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 4/185 (2%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAE----VIYNRESGQSRGFGFVTMST 523 EP ++VGNL ++ + L + G+ +V + + G +R FG+V + Sbjct: 302 EPTTAFNLFVGNLNFNKSAPEL-----KTGISDVFAKNDLAVVDVRIGMTRKFGYVDFES 356 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 E+ +KA+E + G + + + + S+ ER R + NLP++ L Sbjct: 357 AEDLEKALE-LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAK------NLPYKVTQDEL 409 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 ++F + E+ + + G+S+G ++ ++ D + G E+DGR + + Sbjct: 410 KEVFEDAAEIRLVS-----KDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYT 464 Query: 884 AERPQ 898 E+ Q Sbjct: 465 GEKGQ 469
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 90.5 bits (223), Expect = 1e-17 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A + + V LP ++ + LF G +E +++ ++ +GQS G+GFV S + Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPND 92 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 ADKAI T N + + + V+ A RP YV LP + Q+ Sbjct: 93 ADKAINTLNGLKLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMSQKEMEQL 144 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAA 886 FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V A Sbjct: 145 FSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFAN 204 Query: 887 ERPQR 901 Q+ Sbjct: 205 NPSQK 209 Score = 54.7 bits (130), Expect = 8e-07 Identities = 27/80 (33%), Positives = 47/80 (58%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +V NL +A++S L Q+F G V N ++ D T + +GFGFVTM + ++ AI++L+ Sbjct: 287 FVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLN 346 Query: 842 GQEMDGRPLRVNVAAERPQR 901 G + R L+V+ + + Sbjct: 347 GYRLGERVLQVSFKTSKQHK 366 Score = 51.2 bits (121), Expect = 9e-06 Identities = 28/73 (38%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++V NL + D L QLF G V +VI + + + +GFGFVTM+ +EA AI + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 346 NGYRLGERVLQVS 358
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 90.5 bits (223), Expect = 1e-17 Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 2/190 (1%) Frame = +2 Query: 335 GDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 GD G T + V LP ++ E L LF G VE A++I ++ +G S G+GFV Sbjct: 15 GDIGRT-------NLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVN 67 Query: 515 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 694 T ++A++AI T N + + + V+ A RP + Y+ LP Sbjct: 68 YVTAKDAERAISTLNGLRLQSKTIKVSYA--------RPSSEVIKDANLYISGLPRTMTQ 119 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPL 868 + MFS G ++N+ ++ D+ TG SRG F+ + + + AI++ G + G P+ Sbjct: 120 KDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPI 179 Query: 869 RVNVAAERPQ 898 V AA Q Sbjct: 180 TVKFAANPNQ 189 Score = 68.2 bits (165), Expect = 7e-11 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 44/228 (19%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 ++E ++A +Y+ LP + + + +F + G + + V+ ++ +G SRG F+ Sbjct: 99 SSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRS 158 Query: 530 EADKAIETFNRYDISGR-------------------LLN-------------VNRAAQR- 610 EA++AI +F + G LL+ V+ AQR Sbjct: 159 EAEEAITSFIGHKPPGSSEPITVKFAANPNQNKNMALLSQLYHSPARRFGGPVHHQAQRF 218 Query: 611 -----------GSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYD 757 G P +S + ++ NL A++ L QMF G V N ++ D Sbjct: 219 RFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRD 278 Query: 758 RETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 T + +GFGFVTM + E+ AI++L+G + + L+V+ + + Sbjct: 279 FNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKILQVSFKTNKSHK 326
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 90.1 bits (222), Expect = 2e-17 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A + + V LP ++ E LF G +E +++ ++ +GQS G+GFV ++ Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 A+KAI T N + + + V+ A RP YV LP L Q+ Sbjct: 93 AEKAINTLNGLRLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQKELEQL 144 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAA 886 FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V A Sbjct: 145 FSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFAN 204 Query: 887 ERPQR 901 Q+ Sbjct: 205 NPSQK 209 Score = 53.1 bits (126), Expect = 2e-06 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++V NL D D L QLF G V +VI + + + +GFGFVTM+ +EA AI + Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 352 NGYRLGDRVLQVS 364 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/90 (30%), Positives = 49/90 (54%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P + + +V NL +++S L Q+F G V N ++ D T + +GFGFVTM + + Sbjct: 283 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYD 342 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + AI++L+G + R L+V+ + + Sbjct: 343 EAAMAIASLNGYRLGDRVLQVSFKTNKAHK 372
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 90.1 bits (222), Expect = 2e-17 Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A + + V LP ++ E LF G +E +++ ++ +GQS G+GFV ++ Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 A+KAI T N + + + V+ A RP YV LP L Q+ Sbjct: 105 AEKAINTLNGLRLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQKELEQL 156 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAA 886 FS++G ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V A Sbjct: 157 FSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFAN 216 Query: 887 ERPQR 901 Q+ Sbjct: 217 NPSQK 221 Score = 53.1 bits (126), Expect = 2e-06 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++V NL D D L QLF G V +VI + + + +GFGFVTM+ +EA AI + Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 364 NGYRLGDRVLQVS 376 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/90 (30%), Positives = 49/90 (54%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P + + +V NL +++S L Q+F G V N ++ D T + +GFGFVTM + + Sbjct: 295 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYD 354 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + AI++L+G + R L+V+ + + Sbjct: 355 EAAMAIASLNGYRLGDRVLQVSFKTNKAHK 384
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 89.7 bits (221), Expect = 2e-17 Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 2/180 (1%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + + V LP ++ E LF G +E +++ ++ +GQS G+GFV ++A+KAI Sbjct: 45 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI 104 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 T N + + + V+ A RP YV LP L Q+FS++G Sbjct: 105 NTLNGLRLQTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYG 156 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAAERPQR 901 ++ + I+ D+ TG SRG GF+ + + + AI L+GQ+ G P+ V A Q+ Sbjct: 157 RIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216 Score = 53.1 bits (126), Expect = 2e-06 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++V NL D D L QLF G V +VI + + + +GFGFVTM+ +EA AI + Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 359 NGYRLGDRVLQVS 371 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/90 (30%), Positives = 49/90 (54%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P + + +V NL +++S L Q+F G V N ++ D T + +GFGFVTM + + Sbjct: 290 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYD 349 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + AI++L+G + R L+V+ + + Sbjct: 350 EAAMAIASLNGYRLGDRVLQVSFKTNKAHK 379
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 89.7 bits (221), Expect = 2e-17 Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 392 LPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDI 571 LP ++ E L LF G +E +++ ++ +GQS G+GFV ++A+KAI T N + Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105 Query: 572 SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIV 751 + + V+ A RP YV LP L Q+FS++G ++ + I+ Sbjct: 106 QTKTIKVSYA--------RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRIL 157 Query: 752 YDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAAERPQR 901 D+ TG SRG GF+ + + + AI L+GQ+ G P+ V A Q+ Sbjct: 158 VDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQK 209 Score = 65.5 bits (158), Expect = 4e-10 Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 57/235 (24%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS--------- 520 +A +YV LP + + L QLF Q G + + ++ ++ +G SRG GF+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 521 ---------------TIEEADKAIETFNRYDISGRLLNVNRA-----AQRGSRVERP--- 631 T++ A+ + N+ +S + NR AQ+ R Sbjct: 184 KGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLL 243 Query: 632 -------------------------PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 P + + +V NL A++S L QMF G V Sbjct: 244 NMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVT 303 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 N ++ D T + +GFGFVTM + ++ AI++L+G + R L+V+ + + Sbjct: 304 NVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHK 358
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 89.0 bits (219), Expect = 4e-17 Identities = 55/181 (30%), Positives = 93/181 (51%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + + NL Y E L ++F++A ++V + G+S+G+ F+ ++ E+A +A Sbjct: 487 ESKTLVLSNLSYSATEETLQEVFEKATFIKVPQ----NPHGKSKGYAFIEFASFEDAKEA 542 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + N+ +I GR + + RGS P + S +V L + L + F Sbjct: 543 LNSCNKMEIEGRTIRLELQGPRGS----PNARSQPSKTLFVKGLSEDTTEETLKESFEGS 598 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + G Sbjct: 599 ---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 655 Query: 905 F 907 F Sbjct: 656 F 656 Score = 53.5 bits (127), Expect = 2e-06 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 6/231 (2%) Frame = +2 Query: 353 AEPPEEAKVYVGNL-PYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 +EP +++GNL P +E + + ++A V + +G +R FG+V + E Sbjct: 305 SEPTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAAV--DVRTGTNRKFGYVDFESAE 362 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 + +KA+E + G + + + R S+ R R + NL + + L + Sbjct: 363 DLEKALE-LTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAK------NLSFNITEDELKE 415 Query: 710 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 889 +F + E+ + + GRS+G ++ S+ D + + G E+DGR + + E Sbjct: 416 VFEDAVEIRLVS-----QDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGE 470 Query: 890 RPQRGF*CGA----AAESMAWRFS-WTHGNTAEMLLQKTEACHHLKLPH*P 1027 + QR G + ES S ++ T E L + E +K+P P Sbjct: 471 KGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNP 521
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 88.6 bits (218), Expect = 5e-17 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 10/194 (5%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 TA + VYV NL + L F + G + A V+ + E G+S+GFGFV + Sbjct: 208 TANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENAD 266 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSR-------VERPPRQFASSFRA---YVGNLP 679 +A +A+E+ N + + V RA ++ R E+ ++ A F++ YV NL Sbjct: 267 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 326 Query: 680 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 859 D +L ++FS G V ++ ++ D G S+G GFV A+ E+ A+S L G+ ++ Sbjct: 327 PSISDEKLKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKMIES 385 Query: 860 RPLRVNVAAERPQR 901 +PL V +A + R Sbjct: 386 KPLYVAIAQRKEDR 399 Score = 83.2 bits (204), Expect = 2e-15 Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL +D + L F G + +V + SGQS+G+GFV + E A KAIE Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKL 184 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASS----FRAYVGNLPWQAEDSRLVQMFSEH 724 N G LLN ++ G + R R ++ YV NL D L F E+ Sbjct: 185 N-----GMLLN-DKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEY 238 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 G++ +A ++ D E G+S+GFGFV + +D A+ +L+G + D + V A ++ +R Sbjct: 239 GKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296 Score = 51.2 bits (121), Expect = 9e-06 Identities = 27/78 (34%), Positives = 41/78 (52%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVG+L + DS+L F + G VV + D T RS G+G+V + +D AI L+ Sbjct: 39 YVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELN 98 Query: 842 GQEMDGRPLRVNVAAERP 895 + G+P+RV + P Sbjct: 99 YIPLYGKPIRVMYSHRDP 116 Score = 45.8 bits (107), Expect = 4e-04 Identities = 30/98 (30%), Positives = 52/98 (53%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A+ + + +YV NL + E+L ++F G V ++V+ + +G S+G GFV +T EE Sbjct: 312 ADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEE 370 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA 646 A +A+ + I + L V A ++ R R QF+ Sbjct: 371 ATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFS 408
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 87.8 bits (216), Expect = 8e-17 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 3/190 (1%) Frame = +2 Query: 329 SGGDAGY-TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFG 505 SGGD G + + V LP D+ L LF G + ++ + ++G S G+ Sbjct: 87 SGGDGGGGDTQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYA 146 Query: 506 FVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 FV ++ +A AI+T N + + L V+ A RP + YV NLP Sbjct: 147 FVDFASEIDAQNAIKTVNGITVRNKRLKVSYA--------RPGGESIKDTNLYVTNLPRT 198 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG-- 859 D L ++F ++G +V I+ D+ TGR RG FV +E+ AISAL+ +G Sbjct: 199 ITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGAS 258 Query: 860 RPLRVNVAAE 889 +PL V +A E Sbjct: 259 QPLTVRLAEE 268
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 87.8 bits (216), Expect = 8e-17 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 10/185 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 VY+ NL ++ + + LF Q G + ++ + ++ + RGFGFV + E A KA++ Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAVDEL 321 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFAS----------SFRAYVGNLPWQAEDSRLV 706 N + G+ L V RA ++ R E +++ ++ NL + +D RL Sbjct: 322 NDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLK 381 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 FS G + +A I+ D E G+S+GFGFV + E+ + A++ ++ + + G+PL V +A Sbjct: 382 AEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQ 440 Query: 887 ERPQR 901 + R Sbjct: 441 RKEVR 445 Score = 78.2 bits (191), Expect = 7e-14 Identities = 48/175 (27%), Positives = 87/175 (49%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V++ NL +D++ L F G + +V + E G ++G+GFV ++E A+ AIE Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHV 228 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ + + V R R + A+ Y+ NL + + +F + GE+ Sbjct: 229 NGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEIT 288 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + ++V D + + RGFGFV A+ E A+ L+ +E G+ L V A ++ +R Sbjct: 289 SLSLVKD-QNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHER 342 Score = 67.0 bits (162), Expect = 2e-10 Identities = 47/180 (26%), Positives = 85/180 (47%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P A +YVG L V L +LF+ G V V + + +S G+ +V +E+ +K Sbjct: 77 PTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEK 136 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSE 721 A++ N I GR + +QR P + + ++ NL ++ L FS Sbjct: 137 ALDELNYTLIKGRPCRI-MWSQRD-----PSLRKMGTGNVFIKNLDPAIDNKALHDTFSA 190 Query: 722 HGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 G++++ + D E G ++G+GFV S E ++AI ++G ++ + + V R +R Sbjct: 191 FGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRER 249
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus| (Rat) Length = 379 Score = 87.0 bits (214), Expect = 1e-16 Identities = 47/166 (28%), Positives = 90/166 (54%), Gaps = 1/166 (0%) Frame = +2 Query: 335 GDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 G+ G+ + PE+ K+++G L ++ + L + F++ G + V+ + ++ +SRGFGFV Sbjct: 22 GEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 81 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 T S +EE D A+ + + GR++ RA R V+ P + + +VG + E Sbjct: 82 TYSCVEEVDAAM-CARPHKVDGRVVEPKRAVSREDSVK--PGAHLTVKKIFVGGIKEDTE 138 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 + L F ++G++ ++ DR++G+ RGF FVT + +D + Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184 Score = 52.4 bits (124), Expect = 4e-06 Identities = 29/99 (29%), Positives = 52/99 (52%) Frame = +2 Query: 596 RAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRS 775 R +R P++ + ++G L ++ D L + F + G + + ++ D +T RS Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75 Query: 776 RGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 RGFGFVT + E++D+A+ A ++DGR + A R Sbjct: 76 RGFGFVTYSCVEEVDAAMCARP-HKVDGRVVEPKRAVSR 113
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 87.0 bits (214), Expect = 1e-16 Identities = 47/166 (28%), Positives = 90/166 (54%), Gaps = 1/166 (0%) Frame = +2 Query: 335 GDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 G+ G+ + PE+ K+++G L ++ + L + F++ G + V+ + ++ +SRGFGFV Sbjct: 22 GEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 81 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 T S +EE D A+ + + GR++ RA R V+ P + + +VG + E Sbjct: 82 TYSCVEEVDAAM-CARPHKVDGRVVEPKRAVSREDSVK--PGAHLTVKKIFVGGIKEDTE 138 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 + L F ++G++ ++ DR++G+ RGF FVT + +D + Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184 Score = 52.4 bits (124), Expect = 4e-06 Identities = 29/99 (29%), Positives = 52/99 (52%) Frame = +2 Query: 596 RAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRS 775 R +R P++ + ++G L ++ D L + F + G + + ++ D +T RS Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75 Query: 776 RGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 RGFGFVT + E++D+A+ A ++DGR + A R Sbjct: 76 RGFGFVTYSCVEEVDAAMCARP-HKVDGRVVEPKRAVSR 113
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 87.0 bits (214), Expect = 1e-16 Identities = 47/166 (28%), Positives = 90/166 (54%), Gaps = 1/166 (0%) Frame = +2 Query: 335 GDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 G+ G+ + PE+ K+++G L ++ + L + F++ G + V+ + ++ +SRGFGFV Sbjct: 22 GEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 81 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 T S +EE D A+ + + GR++ RA R V+ P + + +VG + E Sbjct: 82 TYSCVEEVDAAM-CARPHKVDGRVVEPKRAVSREDSVK--PGAHLTVKKIFVGGIKEDTE 138 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 + L F ++G++ ++ DR++G+ RGF FVT + +D + Sbjct: 139 EYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184 Score = 52.4 bits (124), Expect = 4e-06 Identities = 29/99 (29%), Positives = 52/99 (52%) Frame = +2 Query: 596 RAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRS 775 R +R P++ + ++G L ++ D L + F + G + + ++ D +T RS Sbjct: 16 RRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRS 75 Query: 776 RGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 RGFGFVT + E++D+A+ A ++DGR + A R Sbjct: 76 RGFGFVTYSCVEEVDAAMCARP-HKVDGRVVEPKRAVSR 113
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus| laevis (African clawed frog) Length = 358 Score = 86.7 bits (213), Expect = 2e-16 Identities = 47/158 (29%), Positives = 83/158 (52%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L ++ E L ++Q G + V+ + S +SRGFGFVT S + E Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + I GR++ RA R + P + + +VG + E+ L + F Sbjct: 64 DAAMSA-RPHTIDGRVVEPKRAVAREESAK--PGAHVTVKKLFVGGIKEDTEEHHLREYF 120 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+G++ + I+ D+++G+ RGFGFVT + +D + Sbjct: 121 EEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158 Score = 52.4 bits (124), Expect = 4e-06 Identities = 26/79 (32%), Positives = 45/79 (56%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L + F++ G +E E+I +++SG+ RGFGFVT + + DK I Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDK-IVL 159 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A + Sbjct: 160 QKYHTINGHNAEVRKALSK 178 Score = 49.3 bits (116), Expect = 3e-05 Identities = 28/93 (30%), Positives = 49/93 (52%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER QF F +G L ++ + L + + G++ + ++ D + RSRGFGFVT Sbjct: 1 MEREKEQFRKLF---IGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTF 57 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 898 + ++D+A+SA +DGR + A R + Sbjct: 58 SCMNEVDAAMSARP-HTIDGRVVEPKRAVAREE 89
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 86.7 bits (213), Expect = 2e-16 Identities = 39/84 (46%), Positives = 56/84 (66%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W +D L FS++GEV+++ I+ DRETGRSRGFGFVT ++ + AI Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67 Query: 833 ALDGQEMDGRPLRVNVAAERPQRG 904 ++GQ++DGR + VN A R G Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91 Score = 69.3 bits (168), Expect = 3e-11 Identities = 37/88 (42%), Positives = 49/88 (55%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A P E + +VG L + D L F Q G V +++I +RE+G+SRGFGFVT + Sbjct: 2 ASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKS 61 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGS 616 AIE N D+ GR + VN A RGS Sbjct: 62 MKDAIEGMNGQDLDGRSITVNEAQSRGS 89
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 86.3 bits (212), Expect = 2e-16 Identities = 60/188 (31%), Positives = 95/188 (50%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++A +Y+GNL V L +L QAG V + +R GFGF ++ + A Sbjct: 9 QDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYA 68 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + N+ + G+ + VNRA+Q +R + +VGNL ++ L FS Sbjct: 69 CQILNQVKLFGKPIRVNRASQ-----DRGVNTLIGA-NLFVGNLDPLVDERVLYDTFSAL 122 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 G++V A V E GRS+G+GFV+ S E D+AI A++ Q + +P+ V+ A +R +G Sbjct: 123 GQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKG 182 Query: 905 F*CGAAAE 928 G AE Sbjct: 183 ERHGDIAE 190
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 85.9 bits (211), Expect = 3e-16 Identities = 39/84 (46%), Positives = 54/84 (64%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W D L Q FS+ G++ ++ I+ DRETGRSRGFGFVT ++ + AI Sbjct: 6 YRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 65 Query: 833 ALDGQEMDGRPLRVNVAAERPQRG 904 ++GQE+DGR + VN A R G Sbjct: 66 GMNGQELDGRNITVNEAQSRGSGG 89 Score = 66.2 bits (160), Expect = 3e-10 Identities = 34/83 (40%), Positives = 49/83 (59%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E + +VG L + + E L Q F Q G + +++I +RE+G+SRGFGFVT + AI Sbjct: 5 EYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAI 64 Query: 548 ETFNRYDISGRLLNVNRAAQRGS 616 E N ++ GR + VN A RGS Sbjct: 65 EGMNGQELDGRNITVNEAQSRGS 87
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 85.5 bits (210), Expect = 4e-16 Identities = 47/158 (29%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP + K+++G L ++ E L F+Q G + V+ + + +SRGFGFVT +T+EE Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + + GR++ RA R + P + + +VG + E+ L F Sbjct: 69 DAAMNA-RPHKVDGRVVEPKRAVSRED--SQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/87 (32%), Positives = 49/87 (56%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L F + G + + ++ D T RSRGFGFVT A+ E Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 ++D+A++A ++DGR + A R Sbjct: 67 EVDAAMNARP-HKVDGRVVEPKRAVSR 92
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 85.5 bits (210), Expect = 4e-16 Identities = 47/158 (29%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP + K+++G L ++ E L F+Q G + V+ + + +SRGFGFVT +T+EE Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + + GR++ RA R + P + + +VG + E+ L F Sbjct: 69 DAAMNA-RPHKVDGRVVEPKRAVSRED--SQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/87 (32%), Positives = 49/87 (56%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L F + G + + ++ D T RSRGFGFVT A+ E Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 ++D+A++A ++DGR + A R Sbjct: 67 EVDAAMNARP-HKVDGRVVEPKRAVSR 92
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 85.5 bits (210), Expect = 4e-16 Identities = 47/158 (29%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP + K+++G L ++ E L F+Q G + V+ + + +SRGFGFVT +T+EE Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + + GR++ RA R + P + + +VG + E+ L F Sbjct: 69 DAAMNA-RPHKVDGRVVEPKRAVSRED--SQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 163 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/87 (32%), Positives = 49/87 (56%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L F + G + + ++ D T RSRGFGFVT A+ E Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 ++D+A++A ++DGR + A R Sbjct: 67 EVDAAMNARP-HKVDGRVVEPKRAVSR 92
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 85.5 bits (210), Expect = 4e-16 Identities = 47/158 (29%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP + K+++G L ++ E L F+Q G + V+ + + +SRGFGFVT +T+EE Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + + GR++ RA R + P + + +VG + E+ L F Sbjct: 68 DAAMNA-RPHKVDGRVVEPKRAVSRED--SQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 124 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162 Score = 53.1 bits (126), Expect = 2e-06 Identities = 28/87 (32%), Positives = 49/87 (56%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L F + G + + ++ D T RSRGFGFVT A+ E Sbjct: 6 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 65 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 ++D+A++A ++DGR + A R Sbjct: 66 EVDAAMNARP-HKVDGRVVEPKRAVSR 91
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus| laevis (African clawed frog) Length = 346 Score = 85.5 bits (210), Expect = 4e-16 Identities = 47/158 (29%), Positives = 83/158 (52%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L ++ E L ++Q G + V+ + S +SRGFGFVT S + E Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ T + I GR++ RA R + P + + +VG + E+ L + F Sbjct: 64 DAAMAT-RPHTIDGRVVEPKRAVAREESAK--PGAHVTVKKLFVGGIKEDTEEHHLREYF 120 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+G++ + I+ D+++G+ RGF FVT + +D + Sbjct: 121 EEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIV 158 Score = 48.1 bits (113), Expect = 7e-05 Identities = 24/79 (30%), Positives = 43/79 (54%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L + F++ G ++ E+I +++SG+ RGF FVT + DK I Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDK-IVL 159 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A + Sbjct: 160 QKYHTINGHNAEVRKALSK 178 Score = 45.4 bits (106), Expect = 5e-04 Identities = 27/93 (29%), Positives = 47/93 (50%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER QF F +G L ++ + L + + G + + ++ D + RSRGFGFVT Sbjct: 1 MEREKEQFRKLF---IGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTF 57 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 898 + ++D+A+ A +DGR + A R + Sbjct: 58 SCMNEVDAAM-ATRPHTIDGRVVEPKRAVAREE 89
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 85.5 bits (210), Expect = 4e-16 Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 10/185 (5%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YV N+ + E+ +LF + G + V+ + G+ +GFGFV E+A KA+E Sbjct: 221 LYVKNINSETTDEQFQELFAKFGPI-VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEAL 279 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFAS----------SFRAYVGNLPWQAEDSRLV 706 N +++G L V RA ++ R+ +Q+ + +V NL +D +L Sbjct: 280 NDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLE 339 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + F+ +G + +A ++ E G+S+GFGFV ++ E+ AI+ + Q + G+PL V +A Sbjct: 340 EEFAPYGTITSAKVM-RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398 Query: 887 ERPQR 901 + R Sbjct: 399 RKDVR 403 Score = 80.9 bits (198), Expect = 1e-14 Identities = 51/175 (29%), Positives = 91/175 (52%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL D+D++ L F G + ++ I E+G+S+GFGFV A +AI+ Sbjct: 128 IFIKNLHPDIDNKALYDTFSVFGDI-LSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++G+ + V R R + A YV N+ + D + ++F++ G +V Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +A++ D + G+ +GFGFV ED A+ AL+ E++G L V A ++ +R Sbjct: 247 SASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300 Score = 71.2 bits (173), Expect = 8e-12 Identities = 53/177 (29%), Positives = 82/177 (46%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 A +YVG+L V L +F G V V + + S G+ +V + E KAIE Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 N I GRL + +QR P + S ++ NL ++ L FS G+ Sbjct: 98 QLNYTPIKGRLCRI-MWSQRD-----PSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGD 151 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 ++++ I D E G+S+GFGFV + AI AL+G ++G+ + V R +R Sbjct: 152 ILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKER 207
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus| laevis (African clawed frog) Length = 385 Score = 85.1 bits (209), Expect = 5e-16 Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 1/168 (0%) Frame = +2 Query: 329 SGGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFG 505 S D G+ + PE+ K+++G L ++ + L + F+Q G + V+ + ++ +SRGFG Sbjct: 12 SSDDQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFG 71 Query: 506 FVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 FVT S +EE D ++ + + GR++ RA R P + + +VG + Sbjct: 72 FVTYSCVEEVDASMSA-RPHKVDGRVVEPKRAVSREDSAR--PGAHLTVKKIFVGGIKED 128 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+ L F +G++ ++ DR++G+ RGF FVT + +D + Sbjct: 129 TEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/87 (31%), Positives = 51/87 (58%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L + F + G++ + ++ D +T RSRGFGFVT + E Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 79 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 ++D+++SA ++DGR + A R Sbjct: 80 EVDASMSARP-HKVDGRVVEPKRAVSR 105
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 85.1 bits (209), Expect = 5e-16 Identities = 38/80 (47%), Positives = 55/80 (68%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W D+ L + FS+ GEV+++ I+ DRETGRSRGFGFVT ++ + AI Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65 Query: 833 ALDGQEMDGRPLRVNVAAER 892 ++G+E+DGR + VN A R Sbjct: 66 EMNGKELDGRTITVNEAQSR 85 Score = 60.5 bits (145), Expect = 1e-08 Identities = 31/82 (37%), Positives = 46/82 (56%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E + +VG L + L + F Q G V +++I +RE+G+SRGFGFVT + AI Sbjct: 5 EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64 Query: 548 ETFNRYDISGRLLNVNRAAQRG 613 + N ++ GR + VN A RG Sbjct: 65 DEMNGKELDGRTITVNEAQSRG 86
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 84.7 bits (208), Expect = 7e-16 Identities = 48/158 (30%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L ++ E L ++Q G + V+ + S +SRGFGFVT S++ E Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + I GR++ RA R + P + + +VG + E+ L F Sbjct: 76 DAAMAA-RPHSIDGRVVEPKRAVAREESGK--PGAHVTVKKLFVGGIKEDTEEHHLRDYF 132 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L F++ G ++ E+I +R+SG+ RGFGFVT + DK I Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK-IVL 171 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A R Sbjct: 172 QKHHTINGHNAEVRKALSR 190 Score = 52.0 bits (123), Expect = 5e-06 Identities = 27/95 (28%), Positives = 52/95 (54%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER R+ + ++G L ++ + L + + G++ + ++ D + RSRGFGFVT Sbjct: 10 LERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTF 69 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 +S ++D+A++A +DGR + A R + G Sbjct: 70 SSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 103
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus| (Mouse) Length = 353 Score = 84.7 bits (208), Expect = 7e-16 Identities = 48/158 (30%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L ++ E L ++Q G + V+ + S +SRGFGFVT S++ E Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + I GR++ RA R + P + + +VG + E+ L F Sbjct: 76 DAAMAA-RPHSIDGRVVEPKRAVAREESGK--PGAHVTVKKLFVGGIKEDTEEHHLRDYF 132 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L F++ G ++ E+I +R+SG+ RGFGFVT + DK I Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK-IVL 171 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A R Sbjct: 172 QKYHTINGHNAEVRKALSR 190 Score = 52.0 bits (123), Expect = 5e-06 Identities = 27/95 (28%), Positives = 52/95 (54%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER R+ + ++G L ++ + L + + G++ + ++ D + RSRGFGFVT Sbjct: 10 LERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTF 69 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 +S ++D+A++A +DGR + A R + G Sbjct: 70 SSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 103
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens| (Human) Length = 353 Score = 84.7 bits (208), Expect = 7e-16 Identities = 48/158 (30%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L ++ E L ++Q G + V+ + S +SRGFGFVT S++ E Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + I GR++ RA R + P + + +VG + E+ L F Sbjct: 76 DAAMAA-RPHSIDGRVVEPKRAVAREESGK--PGAHVTVKKLFVGGIKEDTEEHHLRDYF 132 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 133 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L F++ G ++ E+I +R+SG+ RGFGFVT + DK I Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK-IVL 171 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A R Sbjct: 172 QKYHTINGHNAEVRKALSR 190 Score = 52.0 bits (123), Expect = 5e-06 Identities = 27/95 (28%), Positives = 52/95 (54%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER R+ + ++G L ++ + L + + G++ + ++ D + RSRGFGFVT Sbjct: 10 LERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTF 69 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 +S ++D+A++A +DGR + A R + G Sbjct: 70 SSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 103
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus| (Bovine) Length = 341 Score = 84.7 bits (208), Expect = 7e-16 Identities = 48/158 (30%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L ++ E L ++Q G + V+ + S +SRGFGFVT S++ E Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + I GR++ RA R + P + + +VG + E+ L F Sbjct: 64 DAAMAA-RPHSIDGRVVEPKRAVAREESGK--PGAHVTVKKLFVGGIKEDTEEHHLRDYF 120 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 121 EEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L F++ G ++ E+I +R+SG+ RGFGFVT + DK I Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK-IVL 159 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A R Sbjct: 160 QKYHTINGHNAEVRKALSR 178 Score = 51.2 bits (121), Expect = 9e-06 Identities = 29/95 (30%), Positives = 51/95 (53%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER QF F +G L ++ + L + + G++ + ++ D + RSRGFGFVT Sbjct: 1 MEREKEQFRKLF---IGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTF 57 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 +S ++D+A++A +DGR + A R + G Sbjct: 58 SSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 91
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 84.3 bits (207), Expect = 9e-16 Identities = 48/158 (30%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L + E L ++Q G + V+ + S +SRGFGFVT S++ E Sbjct: 4 EKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + I GR++ RA R + P + + +VG + E+ L F Sbjct: 64 DAAMAA-RPHSIDGRVVEPKRAVAREESGK--PGAHVTVKKLFVGGIKEDTEEHHLRDYF 120 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 +E+G++ I+ DR++G+ RGFGFVT + +D + Sbjct: 121 AEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158 Score = 52.4 bits (124), Expect = 4e-06 Identities = 30/95 (31%), Positives = 51/95 (53%) Frame = +2 Query: 620 VERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTM 799 +ER QF F +G L +Q + L + + G++ + ++ D + RSRGFGFVT Sbjct: 1 MEREKEQFRKLF---IGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTF 57 Query: 800 ASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 +S ++D+A++A +DGR + A R + G Sbjct: 58 SSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 91 Score = 51.2 bits (121), Expect = 9e-06 Identities = 27/79 (34%), Positives = 42/79 (53%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + D + L F + G ++ E+I +R+SG+ RGFGFVT + DK I Sbjct: 101 KLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDK-IVL 159 Query: 554 FNRYDISGRLLNVNRAAQR 610 + I+G V +A R Sbjct: 160 QKYHTINGHNAEVRKALSR 178
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 84.3 bits (207), Expect = 9e-16 Identities = 37/84 (44%), Positives = 56/84 (66%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W +D L F+++G+V+++ I+ DRETGRSRGFGFVT ++ + AI Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67 Query: 833 ALDGQEMDGRPLRVNVAAERPQRG 904 ++GQ++DGR + VN A R G Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91 Score = 64.7 bits (156), Expect = 8e-10 Identities = 35/83 (42%), Positives = 47/83 (56%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E + +VG L + D L F Q G V +++I +RE+G+SRGFGFVT + AI Sbjct: 7 EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAI 66 Query: 548 ETFNRYDISGRLLNVNRAAQRGS 616 E N D+ GR + VN A RGS Sbjct: 67 EGMNGQDLDGRSITVNEAQSRGS 89
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 84.0 bits (206), Expect = 1e-15 Identities = 47/158 (29%), Positives = 82/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP + K+++G L ++ E L + F+Q G + V+ + S +SRGFGFVT + +E Sbjct: 9 EPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEV 68 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ T + + GR++ RA R P + + +VG + E+ L + F Sbjct: 69 DAAM-TARPHKVDGRVVEPKRAVSRED--SSRPGAHLTVKKIFVGGIKEDTEEDHLREYF 125 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++G++ I+ DR +G+ RGF FVT + +D + Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163 Score = 54.3 bits (129), Expect = 1e-06 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI-- 547 K++VG + D + + L + F+Q G +EV E++ +R SG+ RGF FVT + DK + Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165 Query: 548 --ETFNRYDISGR--LLNVNRAAQRGSRVER 628 T N ++ R L A+ GS+ ER Sbjct: 166 KYHTVNNHNSQVRKALSKQEMASVSGSQRER 196 Score = 50.4 bits (119), Expect = 1e-05 Identities = 25/79 (31%), Positives = 46/79 (58%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L ++ D L + F + G + + ++ D + RSRGFGFVT S +++D+A++A Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74 Query: 836 LDGQEMDGRPLRVNVAAER 892 ++DGR + A R Sbjct: 75 RP-HKVDGRVVEPKRAVSR 92
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 84.0 bits (206), Expect = 1e-15 Identities = 51/155 (32%), Positives = 83/155 (53%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP K+++G L Y E L Q F+Q G + V+ + ++ +SRGFGF+T S Sbjct: 12 EPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMV 71 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A + + + GR++ RA R + + RP A+ + +VG + + E++ L F Sbjct: 72 DDA-QNARPHKVDGRVVEPKRAVPR-TEIGRPEAG-ATVKKLFVGGIKEEMEENDLRDYF 128 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLD 820 ++G VV+A IV D+ET + RGF FV + +D Sbjct: 129 KQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVD 163 Score = 53.5 bits (127), Expect = 2e-06 Identities = 28/83 (33%), Positives = 47/83 (56%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L ++ D L Q F + GE+V+ ++ D +T RSRGFGF+T + +D A +A Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77 Query: 836 LDGQEMDGRPLRVNVAAERPQRG 904 ++DGR + A R + G Sbjct: 78 RP-HKVDGRVVEPKRAVPRTEIG 99 Score = 45.1 bits (105), Expect = 6e-04 Identities = 23/80 (28%), Positives = 43/80 (53%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG + +++ L F Q G V A ++ ++E+ + RGF FV + DK + Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLS 168 Query: 554 FNRYDISGRLLNVNRAAQRG 613 N + I G+ ++V +A +G Sbjct: 169 RN-HQIRGKHIDVKKALPKG 187
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 83.6 bits (205), Expect = 2e-15 Identities = 53/173 (30%), Positives = 87/173 (50%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL DV + QLF Q G + ++I S + FV +A A+ Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAM 68 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N I G+ + VN A S+ + ++ F +VG+L + + F+ G++ Sbjct: 69 NGRKILGKEVKVNWATTPSSQ----KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKIS 124 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A +P Sbjct: 125 DARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 177
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 83.6 bits (205), Expect = 2e-15 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 2/188 (1%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 GGD G + + V LP D+ L LF G + ++ + ++G S G+ FV Sbjct: 73 GGDCGDN-QGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFV 131 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 ++ +A AI++ N + + L V+ A RP + YV NLP Sbjct: 132 DFASEIDAQNAIKSLNGVTVRNKRLKVSYA--------RPGGESIKDTNLYVTNLPRTIT 183 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RP 865 D L ++F ++G +V I+ D+ TG+ RG FV +E+ AISAL+ +G +P Sbjct: 184 DDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQP 243 Query: 866 LRVNVAAE 889 L V +A E Sbjct: 244 LTVRLAEE 251
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 83.2 bits (204), Expect = 2e-15 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 3/190 (1%) Frame = +2 Query: 329 SGGDAGYTAEP-PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFG 505 SGG +P + V LP D+ L LF G + ++ + ++G S G+ Sbjct: 110 SGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYA 169 Query: 506 FVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 FV ++ ++ +AI+ N + + L V+ A RP + YV NLP Sbjct: 170 FVDFTSEMDSQRAIKVLNGITVRNKRLKVSYA--------RPGGESIKDTNLYVTNLPRT 221 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG-- 859 D +L +F ++G +V I+ D+ TGR RG FV +E+ AISAL+ +G Sbjct: 222 ITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGS 281 Query: 860 RPLRVNVAAE 889 +PL V +A E Sbjct: 282 QPLSVRLAEE 291
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 83.2 bits (204), Expect = 2e-15 Identities = 46/158 (29%), Positives = 81/158 (51%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP + K+++G L ++ E L F+Q G + V+ + + +SRGFGFVT +T+E+ Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 68 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + + GR++ RA R + P + + +VG + E+ L F Sbjct: 69 DAAMNA-RPHKVDGRVVEPKRAVSRED--SQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++G++ I+ DR +G+ RGF FVT +D + Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 163 Score = 52.0 bits (123), Expect = 5e-06 Identities = 28/87 (32%), Positives = 48/87 (55%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L F + G + + ++ D T RSRGFGFVT A+ E Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 +D+A++A ++DGR + A R Sbjct: 67 KVDAAMNARP-HKVDGRVVEPKRAVSR 92
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 83.2 bits (204), Expect = 2e-15 Identities = 37/80 (46%), Positives = 54/80 (67%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W ++ L FS+ GE+V++ I+ DRETGRSRGFGFVT ++ + AI Sbjct: 8 YRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67 Query: 833 ALDGQEMDGRPLRVNVAAER 892 ++GQ++DGR + VN A R Sbjct: 68 GMNGQDLDGRSITVNEAQSR 87 Score = 68.6 bits (166), Expect = 5e-11 Identities = 36/88 (40%), Positives = 49/88 (55%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 A P E + +VG L + D L F Q G + +++I +RE+G+SRGFGFVT + Sbjct: 2 ASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKS 61 Query: 533 ADKAIETFNRYDISGRLLNVNRAAQRGS 616 AIE N D+ GR + VN A RGS Sbjct: 62 MKDAIEGMNGQDLDGRSITVNEAQSRGS 89
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus| laevis (African clawed frog) Length = 373 Score = 82.8 bits (203), Expect = 3e-15 Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 1/168 (0%) Frame = +2 Query: 329 SGGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFG 505 S D G+ + PE+ K+++G L ++ + L + F+Q G + V+ + ++ +SRGFG Sbjct: 12 SSDDQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFG 71 Query: 506 FVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 FVT S +EE D ++ + + GR++ RA R P + + +VG + Sbjct: 72 FVTYSCVEEVDASMSA-RPHKVDGRVVEPKRAVSREDSAR--PGAHLTVKKIFVGGIKED 128 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 E+ L +G++ ++ DR++G+ RGF FVT + +D + Sbjct: 129 TEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/87 (31%), Positives = 51/87 (58%) Frame = +2 Query: 632 PRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 P++ + ++G L ++ D L + F + G++ + ++ D +T RSRGFGFVT + E Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 79 Query: 812 DLDSAISALDGQEMDGRPLRVNVAAER 892 ++D+++SA ++DGR + A R Sbjct: 80 EVDASMSARP-HKVDGRVVEPKRAVSR 105
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 82.8 bits (203), Expect = 3e-15 Identities = 38/82 (46%), Positives = 56/82 (68%) Frame = +2 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 S + ++G L W +D+ L F+ G+VV+A ++ DRETGRSRGFGFV + +AI Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93 Query: 830 SALDGQEMDGRPLRVNVAAERP 895 S +DG+E++GR +RVN A +RP Sbjct: 94 SEMDGKELNGRHIRVNPANDRP 115 Score = 55.5 bits (132), Expect = 5e-07 Identities = 31/81 (38%), Positives = 45/81 (55%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G L + D L F G V A+VI +RE+G+SRGFGFV + A AI Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 554 FNRYDISGRLLNVNRAAQRGS 616 + +++GR + VN A R S Sbjct: 96 MDGKELNGRHIRVNPANDRPS 116
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 82.0 bits (201), Expect = 5e-15 Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 12/192 (6%) Frame = +2 Query: 362 PEE--AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 PEE +Y+ NL DV + L + F + G + V+ I E+ RG+ FV E+A Sbjct: 196 PEEKYTNLYMKNLDADVSEDLLREKFAEFGKI-VSLAIAKDENRLCRGYAFVNFDNPEDA 254 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQF----------ASSFRAYVGNLPWQ 685 +A ET N + L V RA ++ R + QF A YV N+ Sbjct: 255 RRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVA 314 Query: 686 AEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 + L + FS+ G + + ++ D E G+S+GFGFV ++ E+ A+ GQ G+P Sbjct: 315 VTEEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKP 373 Query: 866 LRVNVAAERPQR 901 L V +A ++ R Sbjct: 374 LYVAIAQKKEDR 385 Score = 71.2 bits (173), Expect = 8e-12 Identities = 50/175 (28%), Positives = 87/175 (49%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+V NLP V + L +F + G + +V E G+SRG+GFV + A AI+T Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVV 736 N ++ + + V + ++ RV +P ++ + Y+ NL + L + F+E G++V Sbjct: 173 NSTIVADKEIYVGKFMKKTDRV-KPEEKYTN---LYMKNLDADVSEDLLREKFAEFGKIV 228 Query: 737 NATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 + I D E RG+ FV + ED A ++G + + L V A ++ +R Sbjct: 229 SLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAER 282 Score = 58.9 bits (141), Expect = 4e-08 Identities = 44/180 (24%), Positives = 82/180 (45%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P A +YVG+L V L F + + + + SG+S +G+ + ++A+ Sbjct: 21 PVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANL 80 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSE 721 AIE N ++G+++ V + V P + +V NLP ++ L MF + Sbjct: 81 AIEKKNNSLLNGKMIRVMWS------VRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKK 134 Query: 722 HGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 G +V+ + E G+SRG+GFV ++ +AI L+ + + + V ++ R Sbjct: 135 FGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR 193 Score = 52.4 bits (124), Expect = 4e-06 Identities = 33/97 (34%), Positives = 52/97 (53%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 + +YV N+ V E L + F Q G + +++ + E G+S+GFGFV ST EEA A++ Sbjct: 304 SNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVK 362 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRA 661 TF+ G+ L V A ++ R + QF + A Sbjct: 363 TFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEA 399
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 82.0 bits (201), Expect = 5e-15 Identities = 54/181 (29%), Positives = 91/181 (50%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + + NL Y E L ++F++A ++V + G+ +G+ F+ ++ E+A +A Sbjct: 485 ESKTLVLSNLSYSATKETLEEVFEKATFIKVPQ----NPHGKPKGYAFIEFASFEDAKEA 540 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + N+ +I GR + R +GS P S +V L + L + F Sbjct: 541 LNSCNKMEIEGRTI---RLELQGSNSRSQP-----SKTLFVKGLSEDTTEETLKESFEGS 592 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 904 V A IV DRETG S+GFGFV S+ED +A A++ E+DG + ++ A + + G Sbjct: 593 ---VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 649 Query: 905 F 907 F Sbjct: 650 F 650 Score = 52.4 bits (124), Expect = 4e-06 Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 11/236 (4%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERL----AQLF--DQAGVVEVAEVIYNRESGQSRGFGFVT 514 +EP +++GNL + L ++LF + VV+V +G +R FG+V Sbjct: 303 SEPTTPFNLFIGNLNPNKSVNELKFAISELFAKNDLAVVDV-------RTGTNRKFGYVD 355 Query: 515 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 694 + E+ +KA+E + G + + + R S+ R R + NL + + Sbjct: 356 FESAEDLEKALE-LTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAK------NLSFNITE 408 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 L ++F + E+ + + G+S+G ++ S+ D + + G E+DGR + + Sbjct: 409 DELKEVFEDAMEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 463 Query: 875 NVAAERPQRGF*CGA----AAESMAWRFS-WTHGNTAEMLLQKTEACHHLKLPH*P 1027 E+ QR G + ES S ++ T E L + E +K+P P Sbjct: 464 YYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETLEEVFEKATFIKVPQNP 519
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 82.0 bits (201), Expect = 5e-15 Identities = 36/80 (45%), Positives = 55/80 (68%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W + L Q F+ G+V+++ ++ DRETGRSRGFGFVT +S++ + AI Sbjct: 8 YRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIE 67 Query: 833 ALDGQEMDGRPLRVNVAAER 892 ++G+E+DGR + VN A R Sbjct: 68 NMNGKELDGRNITVNQAQSR 87 Score = 65.5 bits (158), Expect = 4e-10 Identities = 35/82 (42%), Positives = 51/82 (62%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E + +VG L + ++E L Q F G V ++VI +RE+G+SRGFGFVT S+ + AI Sbjct: 7 EYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAI 66 Query: 548 ETFNRYDISGRLLNVNRAAQRG 613 E N ++ GR + VN+A RG Sbjct: 67 ENMNGKELDGRNITVNQAQSRG 88
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila| melanogaster (Fruit fly) Length = 421 Score = 81.6 bits (200), Expect = 6e-15 Identities = 44/155 (28%), Positives = 83/155 (53%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E E K++VG L ++ E L++ F + G + V+ N ESG+SRGFGFVT + Sbjct: 2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNV 61 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 + ++ + + GR ++ R +++P + ++ ++G LP ++ L F Sbjct: 62 NHVLQN-GPHTLDGRTIDPKPCNPR--TLQKPKK--GGGYKVFLGGLPSNVTETDLRTFF 116 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLD 820 + +G+V I+YD+E +SRGFGF++ + ++ Sbjct: 117 NRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVE 151 Score = 57.4 bits (137), Expect = 1e-07 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 4/87 (4%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS- 832 + +VG L W+ L + F G++++ ++ + E+GRSRGFGFVT A +++ + Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67 Query: 833 ---ALDGQEMDGRPLRVNVAAERPQRG 904 LDG+ +D +P ++P++G Sbjct: 68 GPHTLDGRTIDPKPCNPR-TLQKPKKG 93
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 81.3 bits (199), Expect = 8e-15 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 2/171 (1%) Frame = +2 Query: 383 VGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNR 562 V LP D+ L LF G + ++ + ++G S G+ FV ++ ++ +AI+ N Sbjct: 131 VNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNG 190 Query: 563 YDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNA 742 + + L V+ A RP + YV NLP D +L +F ++G +V Sbjct: 191 ITVRNKRLKVSYA--------RPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQK 242 Query: 743 TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAAE 889 I+ D+ TGR RG FV +E+ AISAL+ +G +PL V +A E Sbjct: 243 NILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAQE 293 Score = 42.4 bits (98), Expect = 0.004 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E ++ +YV NLP + ++L +F + G + ++ ++ +G+ RG FV + EEA Sbjct: 208 ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEA 267 Query: 536 DKAIETFNRYDISG--RLLNVNRAAQRG 613 +AI N G + L+V A + G Sbjct: 268 QEAISALNNVIPEGGSQPLSVRLAQEHG 295
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 81.3 bits (199), Expect = 8e-15 Identities = 37/84 (44%), Positives = 55/84 (65%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W D L + FS+ G+V+++ I+ DRE+GRSRGFGFVT ++ + AI Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65 Query: 833 ALDGQEMDGRPLRVNVAAERPQRG 904 ++G+E+DGR + VN A R G Sbjct: 66 EMNGKELDGRVITVNEAQSRGSGG 89 Score = 66.2 bits (160), Expect = 3e-10 Identities = 35/83 (42%), Positives = 50/83 (60%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E + +VG L + + E L + F Q G V +++I +RESG+SRGFGFVT + AI Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64 Query: 548 ETFNRYDISGRLLNVNRAAQRGS 616 E N ++ GR++ VN A RGS Sbjct: 65 EEMNGKELDGRVITVNEAQSRGS 87
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 80.9 bits (198), Expect = 1e-14 Identities = 48/157 (30%), Positives = 78/157 (49%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K+++G L L F+ G + V+ N ++ +SR FGFVT S +EEA Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D A+ + + + G + + RA R P A + +VG L + L++ F Sbjct: 62 DAAMAA-SPHAVDGNTVELKRAVSREDSAR--PGAHAKVKKLFVGGLKGDVAEGDLIEHF 118 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S+ G V A I+ D+++G+ RGFGFV + + D A Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 55.1 bits (131), Expect = 6e-07 Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Frame = +2 Query: 350 TAEPPEEAKV---YVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMS 520 +A P AKV +VG L DV L + F Q G VE AE+I +++SG+ RGFGFV Sbjct: 88 SARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQ 147 Query: 521 TIEEADKAIETFNRYDISGRLLNVNRAAQR 610 + ADKA + I G + V +A + Sbjct: 148 NHDAADKA-AVVKFHPIQGHRVEVKKAVPK 176 Score = 44.7 bits (104), Expect = 8e-04 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L Q +S L F G + + +V + +T RSR FGFVT ++ E+ D+A++A Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67 Query: 836 LDGQEMDGRPLRVNVAAER 892 +DG + + A R Sbjct: 68 -SPHAVDGNTVELKRAVSR 85
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 80.9 bits (198), Expect = 1e-14 Identities = 41/152 (26%), Positives = 84/152 (55%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E K+++G L +D + L + F + G V +++ + +G+SRGFGF++ D+ Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 ++T ++ + G++++ RA R + + + + +VG + + FS+ Sbjct: 217 VKT--QHILDGKVIDPKRAIPRDEQDK--------TGKIFVGGIGPDVRPKEFEEFFSQW 266 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLD 820 G +++A ++ D++TG+SRGFGFVT S + +D Sbjct: 267 GTIIDAQLMLDKDTGQSRGFGFVTYDSADAVD 298 Score = 53.5 bits (127), Expect = 2e-06 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + K++VG + DV + + F Q G + A+++ ++++GQSRGFGFVT + + Sbjct: 238 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 297 Query: 536 DKAIETFNRY-DISGRLLNVNRAAQR 610 D+ + N++ D R + + RA R Sbjct: 298 DRVCQ--NKFIDFKDRKIEIKRAEPR 321 Score = 51.2 bits (121), Expect = 9e-06 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = +2 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 S + ++G L W + L + F ++G V + I+ D TGRSRGFGF++ +D + Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217 Query: 830 SA---LDGQEMD 856 LDG+ +D Sbjct: 218 KTQHILDGKVID 229
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 80.5 bits (197), Expect = 1e-14 Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 7/180 (3%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL DV + QLF Q G + ++I + + FV A A+ Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP--YCFVEFHEHRHAAAALAAM 66 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASS-------FRAYVGNLPWQAEDSRLVQMF 715 N I G+ + VN A S+ + S F +VG+L Q + F Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAF 126 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 + G + +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A +P Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 80.5 bits (197), Expect = 1e-14 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 2/171 (1%) Frame = +2 Query: 383 VGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNR 562 V LP D+ L LF G + ++ + ++G S G+GFV + +A +AI N Sbjct: 82 VNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNG 141 Query: 563 YDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNA 742 + + + V+ A RP + YV NL D +L +F ++G++V Sbjct: 142 ITVRNKRIKVSFA--------RPGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQK 193 Query: 743 TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAAE 889 I+ D+ TG RG F+ +E+ AISAL+ +G +PL V VA E Sbjct: 194 NILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTVRVAEE 244
>Q62826:HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M - Rattus norvegicus (Rat)| Length = 690 Score = 80.5 bits (197), Expect = 1e-14 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLF-DQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 A P + + ++ N+P+DV + L L ++ G V E++ + E G+SRG V E Sbjct: 64 ANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE-GKSRGCAVVEFKMEE 122 Query: 530 EADKAIETFNRYDISGRLLNVNRA--AQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 KA E N++ +SGR L V + R + + S+ +V NL ++ +L Sbjct: 123 SMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKAGRLGST--VFVANLDYKVGWKKL 180 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 880 ++FS G VV A I+ D++ G+SRG G VT + AIS +GQ + RP+ V + Sbjct: 181 KEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 238 Score = 46.2 bits (108), Expect = 3e-04 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 GG G+ +A +++V NLP+D + L F++ G V A++ E+G+S+G G Sbjct: 599 GGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGCGV 656 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNV 592 V + E A++A N +SGR ++V Sbjct: 657 VKFESPEVAERACRMMNGMKLSGREIDV 684 Score = 39.7 bits (91), Expect = 0.026 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +V NLP+ L F+E G V+ A I E G+S+G G V S E + A ++ Sbjct: 616 FVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMN 673 Query: 842 GQEMDGRPLRVNV 880 G ++ GR + V + Sbjct: 674 GMKLSGREIDVRI 686
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 80.5 bits (197), Expect = 1e-14 Identities = 35/80 (43%), Positives = 54/80 (67%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 +R +VG L W + L F+ +GE++++ ++ DRETGRSRGFGFVT +S+ + AI Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67 Query: 833 ALDGQEMDGRPLRVNVAAER 892 ++G+E+DGR + VN A R Sbjct: 68 NMNGKELDGRNITVNQAQSR 87 Score = 62.0 bits (149), Expect = 5e-09 Identities = 33/82 (40%), Positives = 48/82 (58%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E + +VG L + +E L F G + ++VI +RE+G+SRGFGFVT S+ AI Sbjct: 7 EYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAI 66 Query: 548 ETFNRYDISGRLLNVNRAAQRG 613 E N ++ GR + VN+A RG Sbjct: 67 ENMNGKELDGRNITVNQAQSRG 88
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 80.1 bits (196), Expect = 2e-14 Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIY----NRESGQSRGFG-----------FV 511 +YVGNL DV + QLF Q G + ++I +R S GF FV Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 +A A+ N I G+ + VN A S+ + ++ F +VG+L + Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQ----KKDTSNHFHVFVGDLSPEIT 126 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 + F+ G++ +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R Sbjct: 127 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 186 Query: 872 VNVAAERP 895 N A +P Sbjct: 187 TNWATRKP 194
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 80.1 bits (196), Expect = 2e-14 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 2/171 (1%) Frame = +2 Query: 383 VGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNR 562 V LP D+ L LF G + ++ + ++G S G+ FV + ++ +AI++ N Sbjct: 114 VNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNG 173 Query: 563 YDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNA 742 + + L V+ A RP + YV NLP D +L +F ++G +V Sbjct: 174 ITVRNKRLKVSYA--------RPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQK 225 Query: 743 TIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG--RPLRVNVAAE 889 I+ D+ TG+ RG FV +E+ AISAL+ +G +PL V +A E Sbjct: 226 NILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAEE 276 Score = 43.5 bits (101), Expect = 0.002 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E ++ +YV NLP + ++L +F + G++ ++ ++ +G+ RG FV + EEA Sbjct: 191 ESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEA 250 Query: 536 DKAIETFNRYDISG--RLLNVNRAAQRG 613 +AI N G + L V A + G Sbjct: 251 QEAISALNNVIPEGASQPLTVRLAEEHG 278
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 80.1 bits (196), Expect = 2e-14 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 3/192 (1%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYV-GNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 ++G P ++KV V NL Y + L ++F++A + + + G+++GF F+ Sbjct: 403 NSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKATSIRIPQ-----NQGRAKGFAFIE 457 Query: 515 MSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAED 694 S+ E+A A+++ N +I GR + + +Q G A S +V L + Sbjct: 458 FSSAEDAKDAMDSCNNTEIEGRSIRLE-FSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTE 516 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 L + F VNA IV DR+TG S+GFGFV ++ ED +A A++ E+DG + + Sbjct: 517 ETLKEAFDGS---VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTL 573 Query: 875 NVAAER--PQRG 904 + A + QRG Sbjct: 574 DFAKPKGDSQRG 585 Score = 73.6 bits (179), Expect = 2e-12 Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 3/201 (1%) Frame = +2 Query: 338 DAGYTAEPPEEAK---VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 D TAE +E ++V N+PY E L ++F+ A + + + G ++G + Sbjct: 311 DKNKTAENKKERDSRTLFVKNIPYSTTVEELQEIFENAKDIRIP----TGKDGSNKGIAY 366 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 688 V S +EA+KA+E +I GR + V+ ++ S V NL + A Sbjct: 367 VEFSNEDEANKALEEKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSA 426 Query: 689 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 868 + L ++F + +I + GR++GF F+ +S ED A+ + + E++GR + Sbjct: 427 TEDSLREVFEKA-----TSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSI 481 Query: 869 RVNVAAERPQRGF*CGAAAES 931 R+ + +G G +A+S Sbjct: 482 RLEFSQGGGPQGGGRGGSAQS 502
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 79.7 bits (195), Expect = 2e-14 Identities = 45/101 (44%), Positives = 55/101 (54%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVGNL + L ++FSE+G V + DRETGR RGFGFV M S D+AI ALD Sbjct: 4 YVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQALD 63 Query: 842 GQEMDGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTHGN 964 G E GR L+VN A R ++G G SW+ N Sbjct: 64 GAEWMGRVLKVNKARPREEKGARSGGG--------SWSRNN 96 Score = 62.0 bits (149), Expect = 5e-09 Identities = 32/84 (38%), Positives = 49/84 (58%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL Y V + L ++F + G V ++ +RE+G+ RGFGFV M + D AI+ Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62 Query: 557 NRYDISGRLLNVNRAAQRGSRVER 628 + + GR+L VN+A R + R Sbjct: 63 DGAEWMGRVLKVNKARPREEKGAR 86
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 79.3 bits (194), Expect = 3e-14 Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 7/180 (3%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL DV + QLF Q G + ++I + + FV A A+ Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDP--YCFVEFHEHRHAAAALAAM 66 Query: 557 NRYDISGRLLNVNRAAQRGSRVERPPRQFASS-------FRAYVGNLPWQAEDSRLVQMF 715 N I G+ + VN A S+ + S F +VG+L + + F Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 + G + +A +V D TG+S+G+GFV+ +K D ++AI + GQ + GR +R N A +P Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186 Score = 57.4 bits (137), Expect = 1e-07 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 14/188 (7%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T + V+VG+L ++ +E + F G + A V+ + +G+S+G+GFV+ Sbjct: 99 TQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKW 158 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQR----GSRVERPPRQFA----------SSFRAYV 667 +A+ AI+ + GR + N A ++ S E +Q + ++ Y Sbjct: 159 DAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYC 218 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 G + + + Q FS G+++ + D +G+ FV +S E AI +++G Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGT 272 Query: 848 EMDGRPLR 871 ++G ++ Sbjct: 273 TIEGHVVK 280
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 79.3 bits (194), Expect = 3e-14 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 10/194 (5%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 +A E K++VG L + E L F Q G V ++ ++ + QSRGFGFV Sbjct: 3 SAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSRVER----------PPRQFASSFRAYVGNLP 679 + + + + GR ++ RG + ER P + S + +VG +P Sbjct: 63 CVGTVLAS-RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIP 121 Query: 680 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 859 ++ L + F + G V ++YD E R RGFGF+T ++ +D A++ + ++ G Sbjct: 122 HNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMG 180 Query: 860 RPLRVNVAAERPQR 901 + + V A R + Sbjct: 181 KKVEVKRAEPRDSK 194 Score = 62.8 bits (151), Expect = 3e-09 Identities = 34/112 (30%), Positives = 60/112 (53%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 G G ++ + K++VG +P++ L + F + GVV +IY+ E + RGFGF+ Sbjct: 100 GWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFI 159 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYV 667 T + D+A+ + +DI G+ + V RA R S+ + P + AS + + V Sbjct: 160 TFEDEQSVDQAV-NMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRV 210
>Q8C854:MYEF2_MOUSE Myelin expression factor 2 - Mus musculus (Mouse)| Length = 591 Score = 79.0 bits (193), Expect = 4e-14 Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 40/213 (18%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLF-DQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 P +V++ N+PYD+ + + L ++ G V E+ + E G+SRG G V E Sbjct: 88 PNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAE-GKSRGCGVVEFKDEEFVK 146 Query: 539 KAIETFNRYDISGRLLNV---------NRAAQR------GSR--------VERPPR---- 637 KA+ET N+YD+SGR LN+ RA QR GS V PP Sbjct: 147 KALETMNKYDLSGRPLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSILNN 206 Query: 638 -----QFASSFRA-------YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRG 781 + S+ +A +V NL ++ +L ++FS G V A I D++ G+SRG Sbjct: 207 PNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKD-GKSRG 265 Query: 782 FGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 880 G VT + AIS +GQ + RP+ V + Sbjct: 266 MGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 298 Score = 52.8 bits (125), Expect = 3e-06 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 +++V NLP+D+ ++L + F Q G V AE+ E+G+S+G G V + E A+KA Sbjct: 515 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEI--KMENGKSKGCGTVRFESAESAEKACRI 572 Query: 554 FNRYDISGRLLNV 592 N ISGR ++V Sbjct: 573 MNGIKISGREIDV 585 Score = 41.2 bits (95), Expect = 0.009 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 6/139 (4%) Frame = +2 Query: 482 SGQSRGFGFVTMSTIEEADKAIETFNRYD-----ISGRLLNVNRAAQRGSRVERPPRQFA 646 SG G VT D+ +F+R I R ++V+R G + Sbjct: 451 SGSMSGMSTVTGGMGMGLDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLG 510 Query: 647 SSF-RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDS 823 S + +V NLP+ +L + FS+ G V+ A I E G+S+G G V S E + Sbjct: 511 SKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEI--KMENGKSKGCGTVRFESAESAEK 568 Query: 824 AISALDGQEMDGRPLRVNV 880 A ++G ++ GR + V + Sbjct: 569 ACRIMNGIKISGREIDVRL 587
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 79.0 bits (193), Expect = 4e-14 Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E K++VG L + E L F Q G V ++ ++ + QSRGFGFV Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVER-----------PPRQFASSFRAYVGNLPWQAE 691 + + + + GR ++ RG + ER P + + S + +VG +P Sbjct: 68 LAS-RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCG 126 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 ++ L + F+ G V ++YD E R RGFGF+T ++ +D A++ + ++ G+ + Sbjct: 127 ETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVE 185 Query: 872 VNVAAERPQR 901 V A R + Sbjct: 186 VKRAEPRDSK 195
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 78.6 bits (192), Expect = 5e-14 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 10/189 (5%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E K++VG L + E L F Q G V ++ ++ + QSRGFGFV Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVER----------PPRQFASSFRAYVGNLPWQAED 694 + + + + GR ++ RG + ER P + S + +VG +P + Sbjct: 68 LAS-RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 + L + F + G V ++YD E R RGFGF+T ++ +D A++ + ++ G+ + V Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVEV 185 Query: 875 NVAAERPQR 901 A R + Sbjct: 186 KRAEPRDSK 194 Score = 62.8 bits (151), Expect = 3e-09 Identities = 34/112 (30%), Positives = 60/112 (53%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 G G ++ + K++VG +P++ L + F + GVV +IY+ E + RGFGF+ Sbjct: 100 GWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFI 159 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYV 667 T + D+A+ + +DI G+ + V RA R S+ + P + AS + + V Sbjct: 160 TFEDEQSVDQAV-NMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSRV 210
>Q9P2K5:MYEF2_HUMAN Myelin expression factor 2 - Homo sapiens (Human)| Length = 600 Score = 78.2 bits (191), Expect = 7e-14 Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 40/213 (18%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLF-DQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 P +V++ N+PYD+ + + L ++ G V E+ + E G+SRG G V E Sbjct: 97 PNRNRVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAE-GKSRGCGVVEFKDEEFVK 155 Query: 539 KAIETFNRYDISGRLLNV---------NRAAQR---------------------GSRVER 628 KA+ET N+YD+SGR LN+ RA QR S + Sbjct: 156 KALETMNKYDLSGRPLNIKEDPDGENARRALQRTGGSFPGGHVPDMGSGLMNLPPSILNN 215 Query: 629 P--PRQFASSFRA-------YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRG 781 P P + S+ +A +V NL ++ +L ++FS G V A I D++ G+SRG Sbjct: 216 PNIPPEVISNLQAGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKD-GKSRG 274 Query: 782 FGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 880 G VT + AIS +GQ + RP+ V + Sbjct: 275 MGTVTFEQAIEAVQAISMFNGQFLFDRPMHVKM 307 Score = 52.0 bits (123), Expect = 5e-06 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 +++V NLP+D+ ++L + F Q G V AE+ E+G+S+G G V + E A+KA Sbjct: 524 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEI--KMENGKSKGCGTVRFDSPESAEKACRI 581 Query: 554 FNRYDISGRLLNV 592 N ISGR ++V Sbjct: 582 MNGIKISGREIDV 594 Score = 40.0 bits (92), Expect = 0.020 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 3/185 (1%) Frame = +2 Query: 329 SGGDAGYT--AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGF 502 +GGD+ + AEPP E + P+ ++E+ + E N ES + Sbjct: 13 TGGDSPHLQPAEPPGEPR----REPHPAEAEKQQPQHSSSSNGVKME---NDESAKEE-- 63 Query: 503 GFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPW 682 S ++E + NR+ + N ++G P R R ++ N+P+ Sbjct: 64 ----KSDLKEKSTGSKKANRFHPYSKDKNSGTGEKKG-----PNRN-----RVFISNIPY 109 Query: 683 QAEDSRLVQMFSEH-GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 859 + + + E GEV + D E G+SRG G V +E + A+ ++ ++ G Sbjct: 110 DMKWQAIKDLMREKVGEVTYVELFKDAE-GKSRGCGVVEFKDEEFVKKALETMNKYDLSG 168 Query: 860 RPLRV 874 RPL + Sbjct: 169 RPLNI 173 Score = 40.0 bits (92), Expect = 0.020 Identities = 24/73 (32%), Positives = 39/73 (53%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +V NLP+ +L + FS+ G V+ A I E G+S+G G V S E + A ++ Sbjct: 526 FVRNLPFDLTWQKLKEKFSQCGHVMFAEI--KMENGKSKGCGTVRFDSPESAEKACRIMN 583 Query: 842 GQEMDGRPLRVNV 880 G ++ GR + V + Sbjct: 584 GIKISGREIDVRL 596
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 77.0 bits (188), Expect = 1e-13 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 6/187 (3%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T E + V+ L + L + F G V +I +R S +SRG +V + Sbjct: 146 TPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVS 205 Query: 530 EADKAIETFNRYDISGRLL------NVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 AI + + ++ NRAA + +++ A R YVG+L + Sbjct: 206 SVRLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGS---AGPMRLYVGSLHFNIT 262 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 + L +F G + + ++ D ETGRS+G+GF+T + E A+ L+G E+ GRP++ Sbjct: 263 EDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMK 322 Query: 872 VNVAAER 892 V ER Sbjct: 323 VGHVTER 329
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 77.0 bits (188), Expect = 1e-13 Identities = 44/157 (28%), Positives = 79/157 (50%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K+++G L +D + L + + G V + + +G+SRGFGFV DK Sbjct: 24 DEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKV 83 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 +ET N + + G+L++ RA + + + PP+ + +VG L + + ++ Q F Sbjct: 84 LET-NEHKLDGKLIDPKRA--KALKGKEPPK------KVFVGGLSPETTEEQIKQYFGGF 134 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 GE+ N + D +T RGF FVT +E + + + Sbjct: 135 GEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLES 171 Score = 56.2 bits (134), Expect = 3e-07 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Frame = +2 Query: 611 GSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGF 790 GS++ Q + ++G L W L + S GEV++ TI D TGRSRGFGF Sbjct: 13 GSKINASKNQ-QDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGF 71 Query: 791 VTMASKEDLDSAISA----LDGQEMDGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTH 958 V +D + LDG+ +D + + E P++ F G + E+ + Sbjct: 72 VLFKDAVSVDKVLETNEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPETTEEQIKQYF 131 Query: 959 GNTAEM 976 G E+ Sbjct: 132 GGFGEI 137
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 76.6 bits (187), Expect = 2e-13 Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 2/167 (1%) Frame = +2 Query: 335 GDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRE--SGQSRGFGF 508 GDA + EP K++VG L + + + + + Q G E+ ++I R+ + +SRGFGF Sbjct: 13 GDA--SLEPENLRKIFVGGLTSNTTDDLMREFYSQFG--EITDIIVMRDPTTKRSRGFGF 68 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 688 VT S E D A++ + I G+ ++ RA R + S+ R YV + Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESN--VSTKRLYVSGVREDH 125 Query: 689 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 + L + F+++G V + I+ D+ T + RGFGFVT + +D + Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172 Score = 50.4 bits (119), Expect = 1e-05 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS- 832 + +VG L D + + +S+ GE+ + ++ D T RSRGFGFVT + K ++D+A+ Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83 Query: 833 ---ALDGQEMD 856 +DG+ +D Sbjct: 84 RPHIIDGKTVD 94
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 76.6 bits (187), Expect = 2e-13 Identities = 51/173 (29%), Positives = 80/173 (46%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VGNL + +E + LF Q G + +++ N FGFV M + EAD+AI+ Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIVKN--------FGFVHMDSKSEADEAIQN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y ++G +NV + + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYMLNGMAMNVEMSKGKPK----------TSTKLHVGNISSSCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 V IV D + FV M ED AIS LD G+ + V ++ R Sbjct: 105 VECDIVKD--------YAFVHMERVEDAMEAISGLDNTAFQGKLMSVKLSTSR 149
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 76.3 bits (186), Expect = 3e-13 Identities = 40/81 (49%), Positives = 49/81 (60%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVGNL + + L +F+E+G V + DRETGR RGFGFV M S + +AI ALD Sbjct: 4 YVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEALD 63 Query: 842 GQEMDGRPLRVNVAAERPQRG 904 G E GR L+VN A R RG Sbjct: 64 GAEWMGRDLKVNKAKPREDRG 84 Score = 63.9 bits (154), Expect = 1e-09 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL YDV E L +F + G V+ ++ +RE+G+ RGFGFV M + E AIE Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEAL 62 Query: 557 NRYDISGRLLNVNRAAQRGSR 619 + + GR L VN+A R R Sbjct: 63 DGAEWMGRDLKVNKAKPREDR 83
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 76.3 bits (186), Expect = 3e-13 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 6/187 (3%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T E + V+ L + L + F G V +I +R S +S+G +V + Sbjct: 146 TPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVS 205 Query: 530 EADKAIETFNRYDISGRLL------NVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 AI + + ++ NRAA + +++ A R YVG+L + Sbjct: 206 SVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGS---AGPMRLYVGSLHFNIT 262 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 + L +F G + + ++ D ETGRS+G+GF+T + E A+ L+G E+ GRP++ Sbjct: 263 EDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMK 322 Query: 872 VNVAAER 892 V ER Sbjct: 323 VGHVTER 329
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 76.3 bits (186), Expect = 3e-13 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 6/187 (3%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T E + V+ L + L + F G V +I +R S +S+G +V + Sbjct: 146 TPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVS 205 Query: 530 EADKAIETFNRYDISGRLL------NVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 AI + + ++ NRAA + +++ A R YVG+L + Sbjct: 206 SVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGS---AGPMRLYVGSLHFNIT 262 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLR 871 + L +F G + + ++ D ETGRS+G+GF+T + E A+ L+G E+ GRP++ Sbjct: 263 EDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMK 322 Query: 872 VNVAAER 892 V ER Sbjct: 323 VGHVTER 329
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 75.9 bits (185), Expect = 3e-13 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 5/185 (2%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E + V NL Y E L +LF +A +++ + G+ +G+ FV T E+A +A Sbjct: 459 ESKTLIVNNLSYAASEETLQELFKKATSIKMPQ----NNQGRPKGYAFVEFPTAEDAKEA 514 Query: 545 IETFNRYDISGRLLNVNRAA---QRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 + + N +I GR + + ++ Q+G+ R S +V L + L + F Sbjct: 515 LNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSK-TLFVRGLSEDTTEETLRESF 573 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 ++A IV DR+TG S+GFGFV +S ED +A A++ E+DG + ++ A + Sbjct: 574 EGS---ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAKPKG 630 Query: 896 --QRG 904 QRG Sbjct: 631 EFQRG 635 Score = 58.5 bits (140), Expect = 5e-08 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLA----QLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 T P ++V NL D E L + F + + +V+EV G S+ FG+V Sbjct: 274 TETPASAFSLFVKNLTPTKDYEELRTAIKEFFGKKNL-QVSEV----RIGSSKRFGYVDF 328 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDS 697 + E+ DKA++ N + G + + +A + S E + A + +V NLP++ + Sbjct: 329 LSAEDMDKALQ-LNGKKLMGLEIKLEKAKSKESLKENKKERDARTL--FVKNLPYRVTED 385 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVN 877 + +F EV +V ++E G S+G ++ ++ + + A+ G E+DGR + ++ Sbjct: 386 EMKNVFENALEV---RLVLNKE-GSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVID 441 Query: 878 VAAERPQR 901 E+ Q+ Sbjct: 442 YTGEKSQQ 449
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 75.5 bits (184), Expect = 4e-13 Identities = 47/168 (27%), Positives = 86/168 (51%) Frame = +2 Query: 359 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 P + K+++G L + E L + F Q G V+ V+ + + +SRGFGFVT D Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75 Query: 539 KAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFS 718 K + +R+++ + ++ A R ++ P+ + + +VG L + Q F Sbjct: 76 KVLAQ-SRHELDSKTIDPKVAFPRRAQ----PKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 + G+V +A +++D+ T R RGFGFVT S ED+ + + E++ + Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFES-EDIVEKVCEIHFHEINNK 177 Score = 50.8 bits (120), Expect = 1e-05 Identities = 27/79 (34%), Positives = 40/79 (50%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L WQ L + F + GEV ++ D T RSRGFGFVT + +D + A Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-A 79 Query: 836 LDGQEMDGRPLRVNVAAER 892 E+D + + VA R Sbjct: 80 QSRHELDSKTIDPKVAFPR 98 Score = 45.8 bits (107), Expect = 4e-04 Identities = 22/76 (28%), Positives = 46/76 (60%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG L + E + Q F+Q G V+ A +++++ + + RGFGFVT + + +K E Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE- 168 Query: 554 FNRYDISGRLLNVNRA 601 + ++I+ +++ +A Sbjct: 169 IHFHEINNKMVECKKA 184
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 75.5 bits (184), Expect = 4e-13 Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNL + L LF++ G V +V+ N +GFV M T ++ AI+ Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQN 59 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 N Y ++ + V A R R P + + +VGNL + + ++F ++G V Sbjct: 60 LNGYTLNEFAIKVEAAKSR-----RAPN--TPTTKIFVGNLTDKTRAPEVRELFQKYGTV 112 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER------- 892 V IV R +GFV + D+ AI L+G+ +DG+PL+V V+ R Sbjct: 113 VECDIV--------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGM 164 Query: 893 --PQRGF*CG 916 P++ + CG Sbjct: 165 GDPEQCYRCG 174
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 75.1 bits (183), Expect = 6e-13 Identities = 39/81 (48%), Positives = 50/81 (61%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVGNL ++ L +F+E+G V + DRETG+ RGFGFV M S+ + +AI ALD Sbjct: 4 YVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEALD 63 Query: 842 GQEMDGRPLRVNVAAERPQRG 904 G E GR L+VN A R RG Sbjct: 64 GAEWMGRDLKVNKAKPREDRG 84 Score = 64.3 bits (155), Expect = 1e-09 Identities = 34/81 (41%), Positives = 49/81 (60%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL Y+V + L+ +F + G V+ ++ +RE+GQ RGFGFV M + E AIE Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEAL 62 Query: 557 NRYDISGRLLNVNRAAQRGSR 619 + + GR L VN+A R R Sbjct: 63 DGAEWMGRDLKVNKAKPREDR 83
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 75.1 bits (183), Expect = 6e-13 Identities = 43/157 (27%), Positives = 78/157 (49%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K+++G L +D + L + + G V + + +G+SRGFGFV DK Sbjct: 24 DEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKV 83 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 +ET + + G+L++ RA + + + PP+ + +VG L + + ++ Q F Sbjct: 84 LET-KEHKLDGKLIDPKRA--KALKGKEPPK------KVFVGGLSPETTEEQIKQYFGGF 134 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 GE+ N + D +T RGF FVT +E + + + Sbjct: 135 GEIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLES 171 Score = 57.4 bits (137), Expect = 1e-07 Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Frame = +2 Query: 611 GSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGF 790 GS++ Q + ++G L W L + S GEVV+ TI D TGRSRGFGF Sbjct: 13 GSKINASKNQ-QDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGF 71 Query: 791 VTMASKEDLDSAISA----LDGQEMDGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTH 958 V +D + LDG+ +D + + E P++ F G + E+ + Sbjct: 72 VLFKDAVSVDKVLETKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPETTEEQIKQYF 131 Query: 959 GNTAEM 976 G E+ Sbjct: 132 GGFGEI 137
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila| melanogaster (Fruit fly) Length = 365 Score = 74.7 bits (182), Expect = 7e-13 Identities = 47/158 (29%), Positives = 77/158 (48%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP K+++G L Y E L F++ G + V+ + + +SRGFGF+T S Sbjct: 26 EPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMI 85 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF 715 D+A ++ + I GR++ RA R P A+ + +VG L ++ + F Sbjct: 86 DEAQKS-RPHKIDGRVVEPKRAVPRQDIDS--PNAGATVKKLFVGALKDDHDEQSIRDYF 142 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 G +V+ IV D+ETG+ RGF FV + +D + Sbjct: 143 QHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVV 180 Score = 46.6 bits (109), Expect = 2e-04 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L ++ D L F + G +V+ ++ D T RSRGFGF+T + +D A + Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91 Query: 836 LDGQEMDGRPLRVNVAAER 892 ++DGR + A R Sbjct: 92 RP-HKIDGRVVEPKRAVPR 109
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 74.7 bits (182), Expect = 7e-13 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 14/195 (7%) Frame = +2 Query: 362 PEEAK---VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 PEE V+ L + L F G V +I +R S +S+G +V I+ Sbjct: 160 PEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQS 219 Query: 533 ADKAIETFNRYDISGRLLNV-----------NRAAQRGSRVERPPRQFASSFRAYVGNLP 679 AI + RLL V NR A + +++ R YVG+L Sbjct: 220 VPLAIGLTGQ-----RLLGVPIIVQASQAEKNRLAAMANNLQKGN---GGPMRLYVGSLH 271 Query: 680 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 859 + + L +F G++ N ++ D +TGRS+G+GF+T + E A+ L+G E+ G Sbjct: 272 FNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG 331 Query: 860 RPLRVNVAAERPQRG 904 RP+RV ER G Sbjct: 332 RPMRVGHVTERLDGG 346
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 74.7 bits (182), Expect = 7e-13 Identities = 38/92 (41%), Positives = 56/92 (60%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R P S +VGN+P++A + +L +FSE G VV+ +VYDRETG+ +G+GF Sbjct: 7 RDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +E SA+ L+G+E GR LRV+ AA + Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAASEKNK 98 Score = 63.9 bits (154), Expect = 1e-09 Identities = 30/83 (36%), Positives = 48/83 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+VGN+PY+ E+L +F + G V ++Y+RE+G+ +G+GF E A A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 557 NRYDISGRLLNVNRAAQRGSRVE 625 N + SGR L V+ AA ++ E Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 74.7 bits (182), Expect = 7e-13 Identities = 38/92 (41%), Positives = 56/92 (60%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R P S +VGN+P++A + +L +FSE G VV+ +VYDRETG+ +G+GF Sbjct: 7 RDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +E SA+ L+G+E GR LRV+ AA + Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAASEKNK 98 Score = 63.9 bits (154), Expect = 1e-09 Identities = 30/83 (36%), Positives = 48/83 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+VGN+PY+ E+L +F + G V ++Y+RE+G+ +G+GF E A A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 557 NRYDISGRLLNVNRAAQRGSRVE 625 N + SGR L V+ AA ++ E Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila| melanogaster (Fruit fly) Length = 385 Score = 74.3 bits (181), Expect = 1e-12 Identities = 47/164 (28%), Positives = 81/164 (49%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 D EP + K+++G L Y + L F++ G + V+ + ++ +SRGFGF+T Sbjct: 13 DGEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDS 697 S D A + + I GR + RA R + P A+ + +VG L ++ Sbjct: 73 SQSYMIDNA-QNARPHKIDGRTVEPKRAVPR--QEIDSPNAGATVKKLFVGGLRDDHDEE 129 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 L + F + G++V+ IV D++TG+ RGF F+ + +D I Sbjct: 130 CLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173 Score = 48.5 bits (114), Expect = 6e-05 Identities = 25/81 (30%), Positives = 45/81 (55%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L ++ D L F + G +V+ ++ D +T RSRGFGF+T + +D+A +A Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84 Query: 836 LDGQEMDGRPLRVNVAAERPQ 898 ++DGR + A R + Sbjct: 85 RP-HKIDGRTVEPKRAVPRQE 104
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 73.9 bits (180), Expect = 1e-12 Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 6/175 (3%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 E ++V NL +D E L +LF G V A++I ++ G RG G V + E AI Sbjct: 121 ENSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAI 178 Query: 548 ETFNRYDISGRLLNVNR------AAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 F+ R L V + AA+ S+ + + + F ++ NLP+ L Sbjct: 179 SKFDGALFMDRKLMVRQDNPPPEAAKEFSK-KATREEIDNGFEVFIINLPYSMNWQSLKD 237 Query: 710 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 MF E G V+ A + D G SRGFG V +++++ AI +G E++GR L V Sbjct: 238 MFKECGHVLRADVELDFN-GFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEV 291 Score = 40.0 bits (92), Expect = 0.020 Identities = 23/75 (30%), Positives = 35/75 (46%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +Y NLP+ L LF G + AE + +E+GQ G V + +AD I+ Sbjct: 351 IYCSNLPFSTARSDLFDLFGPIGKINNAE-LKPQENGQPTGVAVVEYENLVDADFCIQKL 409 Query: 557 NRYDISGRLLNVNRA 601 N Y+ G L ++ A Sbjct: 410 NNYNYGGCSLQISYA 424
>Q8K3P4:MSI1H_RAT RNA-binding protein Musashi homolog 1 - Rattus norvegicus (Rat)| Length = 362 Score = 73.6 bits (179), Expect = 2e-12 Identities = 46/168 (27%), Positives = 85/168 (50%) Frame = +2 Query: 359 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 P + K+++G L + E L + F Q G V+ V+ + + +SRGFGFVT D Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75 Query: 539 KAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFS 718 K + +R+++ + ++ A R ++ P+ + + +VG L + F Sbjct: 76 KVLAQ-SRHELDSKTIDPKVAFPRRAQ----PKMVTRTKKIFVGGLSVNTTVEDVKHYFE 130 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 + G+V +A +++D+ T R RGFGFVT S ED+ + + E++ + Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFES-EDIVEKVCEIHFHEINNK 177 Score = 50.8 bits (120), Expect = 1e-05 Identities = 27/79 (34%), Positives = 40/79 (50%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L WQ L + F + GEV ++ D T RSRGFGFVT + +D + A Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-A 79 Query: 836 LDGQEMDGRPLRVNVAAER 892 E+D + + VA R Sbjct: 80 QSRHELDSKTIDPKVAFPR 98 Score = 43.9 bits (102), Expect = 0.001 Identities = 21/76 (27%), Positives = 45/76 (59%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG L + E + F+Q G V+ A +++++ + + RGFGFVT + + +K E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE- 168 Query: 554 FNRYDISGRLLNVNRA 601 + ++I+ +++ +A Sbjct: 169 IHFHEINNKMVECKKA 184
>Q61474:MSI1H_MOUSE RNA-binding protein Musashi homolog 1 - Mus musculus (Mouse)| Length = 362 Score = 73.6 bits (179), Expect = 2e-12 Identities = 46/168 (27%), Positives = 85/168 (50%) Frame = +2 Query: 359 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 P + K+++G L + E L + F Q G V+ V+ + + +SRGFGFVT D Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75 Query: 539 KAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFS 718 K + +R+++ + ++ A R ++ P+ + + +VG L + F Sbjct: 76 KVLAQ-SRHELDSKTIDPKVAFPRRAQ----PKMVTRTKKIFVGGLSVNTTVEDVKHYFE 130 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 + G+V +A +++D+ T R RGFGFVT S ED+ + + E++ + Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFES-EDIVEKVCEIHFHEINNK 177 Score = 50.8 bits (120), Expect = 1e-05 Identities = 27/79 (34%), Positives = 40/79 (50%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L WQ L + F + GEV ++ D T RSRGFGFVT + +D + A Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-A 79 Query: 836 LDGQEMDGRPLRVNVAAER 892 E+D + + VA R Sbjct: 80 QSRHELDSKTIDPKVAFPR 98 Score = 43.9 bits (102), Expect = 0.001 Identities = 21/76 (27%), Positives = 45/76 (59%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG L + E + F+Q G V+ A +++++ + + RGFGFVT + + +K E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE- 168 Query: 554 FNRYDISGRLLNVNRA 601 + ++I+ +++ +A Sbjct: 169 IHFHEINNKMVECKKA 184
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 73.6 bits (179), Expect = 2e-12 Identities = 38/92 (41%), Positives = 56/92 (60%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R P S +VGN+P++A + +L +FSE G VV+ +VYDRETG+ +G+GF Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +E SA+ L+G+E GR LRV+ AA + Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAASEKNK 98 Score = 64.7 bits (156), Expect = 8e-10 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Frame = +2 Query: 341 AGYTAEPPEEAK----VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 AG T P + V+VGN+PY+ E+L +F + G V ++Y+RE+G+ +G+GF Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVE 625 E A A+ N + SGR L V+ AA ++ E Sbjct: 62 CEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 73.6 bits (179), Expect = 2e-12 Identities = 38/92 (41%), Positives = 56/92 (60%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R P S +VGN+P++A + +L +FSE G VV+ +VYDRETG+ +G+GF Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +E SA+ L+G+E GR LRV+ AA + Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAASEKNK 98 Score = 63.9 bits (154), Expect = 1e-09 Identities = 30/83 (36%), Positives = 48/83 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 V+VGN+PY+ E+L +F + G V ++Y+RE+G+ +G+GF E A A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 557 NRYDISGRLLNVNRAAQRGSRVE 625 N + SGR L V+ AA ++ E Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 73.6 bits (179), Expect = 2e-12 Identities = 38/92 (41%), Positives = 56/92 (60%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R P S +VGN+P++A + +L +FSE G VV+ +VYDRETG+ +G+GF Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +E SA+ L+G+E GR LRV+ AA + Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAASEKNK 98 Score = 64.7 bits (156), Expect = 8e-10 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Frame = +2 Query: 341 AGYTAEPPEEAK----VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 AG T P + V+VGN+PY+ E+L +F + G V ++Y+RE+G+ +G+GF Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVE 625 E A A+ N + SGR L V+ AA ++ E Sbjct: 62 CEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 73.6 bits (179), Expect = 2e-12 Identities = 38/92 (41%), Positives = 56/92 (60%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 R P S +VGN+P++A + +L +FSE G VV+ +VYDRETG+ +G+GF Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVAAERPQR 901 +E SA+ L+G+E GR LRV+ AA + Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAASEKNK 98 Score = 64.7 bits (156), Expect = 8e-10 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%) Frame = +2 Query: 341 AGYTAEPPEEAK----VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 AG T P + V+VGN+PY+ E+L +F + G V ++Y+RE+G+ +G+GF Sbjct: 2 AGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGF 61 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVE 625 E A A+ N + SGR L V+ AA ++ E Sbjct: 62 CEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 72.8 bits (177), Expect = 3e-12 Identities = 38/77 (49%), Positives = 49/77 (63%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVGNL ++A ++ L +F+++GEV + DRETGR RGF FV M D+AI+ LD Sbjct: 4 YVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITELD 63 Query: 842 GQEMDGRPLRVNVAAER 892 G E GR LRVN A R Sbjct: 64 GAEWMGRQLRVNKAKPR 80 Score = 50.4 bits (119), Expect = 1e-05 Identities = 29/78 (37%), Positives = 41/78 (52%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL Y L +F G V+ + +RE+G+ RGF FV M+ + D AI Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 557 NRYDISGRLLNVNRAAQR 610 + + GR L VN+A R Sbjct: 63 DGAEWMGRQLRVNKAKPR 80
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 72.8 bits (177), Expect = 3e-12 Identities = 37/80 (46%), Positives = 49/80 (61%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVGNL + ++ L +F+E+G V + DRETGR RGFGFV + + + +AI ALD Sbjct: 4 YVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALD 63 Query: 842 GQEMDGRPLRVNVAAERPQR 901 G E GR L+VN A R R Sbjct: 64 GAEWMGRDLKVNKAKPRENR 83 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/81 (40%), Positives = 47/81 (58%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL YDV L +F + G V+ ++ +RE+G+ RGFGFV + E AIE Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEAL 62 Query: 557 NRYDISGRLLNVNRAAQRGSR 619 + + GR L VN+A R +R Sbjct: 63 DGAEWMGRDLKVNKAKPRENR 83
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 72.8 bits (177), Expect = 3e-12 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 836 LDGQEMDGRPLRVNVA---AERPQRGF*CGAA 922 ++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98 Score = 65.5 bits (158), Expect = 4e-10 Identities = 32/100 (32%), Positives = 56/100 (56%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K++VG L +D + + L Q+F + G + V+ +RE+ +SRGFGFVT I++A A Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAY 664 + N + GR + V++A + R R ++ R + Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGF 103
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 72.8 bits (177), Expect = 3e-12 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 836 LDGQEMDGRPLRVNVA---AERPQRGF*CGAA 922 ++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98 Score = 65.5 bits (158), Expect = 4e-10 Identities = 32/100 (32%), Positives = 56/100 (56%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K++VG L +D + + L Q+F + G + V+ +RE+ +SRGFGFVT I++A A Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAY 664 + N + GR + V++A + R R ++ R + Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGF 103
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 72.8 bits (177), Expect = 3e-12 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 836 LDGQEMDGRPLRVNVA---AERPQRGF*CGAA 922 ++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98 Score = 65.5 bits (158), Expect = 4e-10 Identities = 32/100 (32%), Positives = 56/100 (56%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K++VG L +D + + L Q+F + G + V+ +RE+ +SRGFGFVT I++A A Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAY 664 + N + GR + V++A + R R ++ R + Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGF 103
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 72.8 bits (177), Expect = 3e-12 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 836 LDGQEMDGRPLRVNVA---AERPQRGF*CGAA 922 ++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98 Score = 65.5 bits (158), Expect = 4e-10 Identities = 32/100 (32%), Positives = 56/100 (56%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K++VG L +D + + L Q+F + G + V+ +RE+ +SRGFGFVT I++A A Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAY 664 + N + GR + V++A + R R ++ R + Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGF 103
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 72.8 bits (177), Expect = 3e-12 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + + L Q+FS++G++ +V DRET RSRGFGFVT + +D A+ A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 836 LDGQEMDGRPLRVNVA---AERPQRGF*CGAA 922 ++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98 Score = 65.5 bits (158), Expect = 4e-10 Identities = 32/100 (32%), Positives = 56/100 (56%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K++VG L +D + + L Q+F + G + V+ +RE+ +SRGFGFVT I++A A Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAY 664 + N + GR + V++A + R R ++ R + Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGF 103
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 72.4 bits (176), Expect = 4e-12 Identities = 42/155 (27%), Positives = 77/155 (49%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 +K+++G L +D + L + + G V + + +G+SRGFGFV DK +E Sbjct: 34 SKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 93 Query: 551 TFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 T + + G+L++ RA + + + PP+ + +VG L + + ++ Q F GE Sbjct: 94 T-KEHKLDGKLIDPKRA--KALQGKEPPK------KVFVGGLSPETTEEQIKQYFGGFGE 144 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + N + D +T RGF FVT +E + + + Sbjct: 145 IENIELPMDTKTNERRGFCFVTYTDEEPVQKLLES 179 Score = 57.4 bits (137), Expect = 1e-07 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%) Frame = +2 Query: 623 ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMA 802 E P F + ++G L W L + S GEV++ TI D TGRSRGFGFV Sbjct: 24 ESNPDFFLIRSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFK 83 Query: 803 SKEDLDSAISA----LDGQEMDGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTA 970 +D + LDG+ +D + + E P++ F G + E+ + G Sbjct: 84 DAVSVDKVLETKEHKLDGKLIDPKRAKALQGKEPPKKVFVGGLSPETTEEQIKQYFGGFG 143 Query: 971 EM 976 E+ Sbjct: 144 EI 145
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 72.0 bits (175), Expect = 5e-12 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 16/188 (8%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++VG LP SE+L +LF Q G V+ V+ + S RGFG+VT S +E+ +A++ Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 557 NRYD--------ISGRLLNVNRAAQRGSRVERPPRQ--------FASSFRAYVGNLPWQA 688 ++ +L N + + E P ++ R + NL ++ Sbjct: 66 TTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFKC 125 Query: 689 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 868 + L +F++ G V+ I + G+ RGFGFV + + A+ ++ +E+ GR + Sbjct: 126 SEDDLKTVFAQFGAVLEVNIP-RKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTV 184 Query: 869 RVNVAAER 892 V+ A + Sbjct: 185 AVDWAVAK 192 Score = 42.7 bits (99), Expect = 0.003 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 6/133 (4%) Frame = +2 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDS 697 ST E+ DKA++ N+ + + P ++ NL + +E+ Sbjct: 308 STEEQEDKAVQVSNK------------------KKRKLPSDVNEGKTVFIRNLSFDSEEE 349 Query: 698 RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD------GQEMDG 859 L ++ + GE+ IV +T S+G F ++E + A G ++DG Sbjct: 350 ELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDG 409 Query: 860 RPLRVNVAAERPQ 898 R L+V++A R + Sbjct: 410 RQLKVDLAVTRDE 422
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 72.0 bits (175), Expect = 5e-12 Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 11/165 (6%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQ---SRGFGFVTMSTIEEADKAI 547 +++ NL +D E+L ++F + G V+ + + S GFGFV E+A KA+ Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791 Query: 548 ETFNRYDISGRLLNVNRAAQRGS-------RVERPPRQFASSFRAYVGNLPWQAEDSRLV 706 + + + G L V R ++R + R ++ PR+ +S + V N+P+QA + Sbjct: 792 KQLQGHVVDGHKLEV-RISERATKPAVTLARKKQVPRKQTTS-KILVRNIPFQAHSREIR 849 Query: 707 QMFSEHGEVVNATIVYDRE-TGRSRGFGFVTMASKEDLDSAISAL 838 ++FS GE+ + TG RGFGFV +K+D A +AL Sbjct: 850 ELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNAL 894 Score = 58.9 bits (141), Expect = 4e-08 Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 17/190 (8%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP V + P++V + + + A + VA I G G+ FV S EE Sbjct: 289 EPTTCHTVKLRGAPFNVTEKNVMEFL--APLKPVAIRIVRNAHGNKTGYIFVDFSNEEEV 346 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPR-----------------QFASSFRAY 664 +A++ NR + GR + V R + P A S R + Sbjct: 347 KQALKC-NREYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLF 405 Query: 665 VGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG 844 V NLP+ + + L ++FS++G + D T + +GF F+T E A S +DG Sbjct: 406 VRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDG 465 Query: 845 QEMDGRPLRV 874 Q GR L V Sbjct: 466 QVFQGRMLHV 475 Score = 43.1 bits (100), Expect = 0.002 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 22/140 (15%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 +++ V NLP + ER QLF G + + + ++ G+ R FGF+ + EEA KA + Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQKAQK 60 Query: 551 TFNRYDISGRLLNV---------------NRAAQRGSRVERPPRQFAS-------SFRAY 664 FN+ I + V ++ AQ+ S+ ++PP+ + + Sbjct: 61 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV 120 Query: 665 VGNLPWQAEDSRLVQMFSEH 724 G L ED+ + S H Sbjct: 121 AGQLEKLKEDTEFQEFLSVH 140 Score = 39.3 bits (90), Expect = 0.034 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGR---SRGFGFVTMASKEDLDSAIS 832 ++ NL + + +L ++FS+ G V + +I + S GFGFV E A+ Sbjct: 733 FIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALK 792 Query: 833 ALDGQEMDGRPLRVNVA 883 L G +DG L V ++ Sbjct: 793 QLQGHVVDGHKLEVRIS 809 Score = 35.0 bits (79), Expect = 0.64 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRE-SGQSRGFGFVTMSTIEEADKA 544 +K+ V N+P+ S + +LF G ++ + +G RGFGFV T ++A +A Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRA 890 Score = 33.9 bits (76), Expect = 1.4 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 R V NLP ++ R Q+F+ G + + ++ + ++ G+ R FGF+ S+E+ A Sbjct: 3 RLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQKA 58
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 71.6 bits (174), Expect = 6e-12 Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 16/188 (8%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++VG LP S++L +LF Q G V+ V+ + S RGFG+VT S +E+ +A++ Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 557 NRYD--------ISGRLLNVNRAAQRGSRVERPPRQ--------FASSFRAYVGNLPWQA 688 ++ +L N ++ ++ E P ++ R + NL ++ Sbjct: 66 TTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFKC 125 Query: 689 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 868 + L +F+ +G V+ I + G+ RGF FV + + A+ + +E+ GR + Sbjct: 126 SEDDLKAVFTHYGTVLEVNIP-KKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTV 184 Query: 869 RVNVAAER 892 V+ A + Sbjct: 185 AVDWAVAK 192
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 71.6 bits (174), Expect = 6e-12 Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG++P E + F+Q G V +I ++ +GQ +G FV +T ++AD+AI Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRA 180 Query: 554 F-NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGE 730 N+ + G V G R R F+ +VG+L QA + + ++F + G Sbjct: 181 LHNQITLPGGTGPVQVRYADGER----ERIGTLEFKLFVGSLNKQATEKEVEEIFLQFGH 236 Query: 731 VVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG-QEMDG--RPLRVNVA-AERPQ 898 V + ++ D E +SRG GFV +SKE +AI L+G M G +PL V A +RP+ Sbjct: 237 VEDVYLMRD-EYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRPK 295 Query: 899 RG 904 G Sbjct: 296 PG 297 Score = 51.2 bits (121), Expect = 9e-06 Identities = 23/68 (33%), Positives = 40/68 (58%) Frame = +2 Query: 644 ASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDS 823 +S+ + +VG++P A + + F +HG V+ ++ D+ TG+ +G FV A+ +D D Sbjct: 117 SSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADR 176 Query: 824 AISALDGQ 847 AI AL Q Sbjct: 177 AIRALHNQ 184
>Q99069:GRP1_SORBI Glycine-rich RNA-binding protein 1 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 142 Score = 71.2 bits (173), Expect = 8e-12 Identities = 34/64 (53%), Positives = 47/64 (73%) Frame = +2 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 FS +GEV+ + I+ DRET RSRGFGFVT +++E + SAI ++G+E+DGR + VN A R Sbjct: 7 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSR 66 Query: 893 PQRG 904 RG Sbjct: 67 GGRG 70 Score = 55.1 bits (131), Expect = 6e-07 Identities = 30/67 (44%), Positives = 39/67 (58%) Frame = +2 Query: 419 LAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNR 598 L F G V +++I +RE+ +SRGFGFVT ST E AIE N ++ GR + VN Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNE 62 Query: 599 AAQRGSR 619 A RG R Sbjct: 63 AQSRGGR 69
>Q9WX39:RBPF_ANASP Putative RNA-binding protein rbpF - Anabaena sp. (strain PCC 7120)| Length = 105 Score = 70.9 bits (172), Expect = 1e-11 Identities = 36/81 (44%), Positives = 47/81 (58%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 YVGNL ++ + +F+E+G V + DRETGR RGF FV M S + +AI LD Sbjct: 4 YVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGLD 63 Query: 842 GQEMDGRPLRVNVAAERPQRG 904 G E GR L+VN A + RG Sbjct: 64 GAEWMGRDLKVNKAKPKEDRG 84 Score = 56.6 bits (135), Expect = 2e-07 Identities = 31/81 (38%), Positives = 47/81 (58%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +YVGNL Y+V E ++ +F + G V+ + +RE+G+ RGF FV M + E AIE Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGL 62 Query: 557 NRYDISGRLLNVNRAAQRGSR 619 + + GR L VN+A + R Sbjct: 63 DGAEWMGRDLKVNKAKPKEDR 83
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus| (Mouse) Length = 301 Score = 70.9 bits (172), Expect = 1e-11 Identities = 39/157 (24%), Positives = 76/157 (48%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ K+++G L +D + L + + G V + + +G+SRGFGFV DK Sbjct: 27 DDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 86 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 +E + + G+L++ RA + + + PP+ + +VG L + ++ + F Sbjct: 87 LE-LKEHKLDGKLIDPKRA--KALKGKEPPK------KVFVGGLSPDTSEEQIKEYFGAF 137 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 GE+ N + D +T RGF F+T +E + + + Sbjct: 138 GEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 174 Score = 56.6 bits (135), Expect = 2e-07 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Frame = +2 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 +E N Y N+ A+ GS++ Q + ++G L W L + S Sbjct: 1 MEDMNEYS------NIEEFAE-GSKINASKNQ-QDDGKMFIGGLSWDTSKKDLTEYLSRF 52 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQEMDGRPLRVNVAAER 892 GEVV+ TI D TGRSRGFGFV +D + LDG+ +D + + E Sbjct: 53 GEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEP 112 Query: 893 PQRGF*CGAAAES 931 P++ F G + ++ Sbjct: 113 PKKVFVGGLSPDT 125
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens| (Human) Length = 420 Score = 70.9 bits (172), Expect = 1e-11 Identities = 39/157 (24%), Positives = 76/157 (48%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ K+++G L +D + L + + G V + + +G+SRGFGFV DK Sbjct: 146 DDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 205 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 +E + + G+L++ RA + + + PP+ + +VG L + ++ + F Sbjct: 206 LE-LKEHKLDGKLIDPKRA--KALKGKEPPK------KVFVGGLSPDTSEEQIKEYFGAF 256 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 GE+ N + D +T RGF F+T +E + + + Sbjct: 257 GEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 293 Score = 57.0 bits (136), Expect = 2e-07 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Frame = +2 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 ++ +E N Y N+ A+ GS++ Q + ++G L W L + Sbjct: 115 DSSVTMEDMNEYS------NIEEFAE-GSKINASKNQ-QDDGKMFIGGLSWDTSKKDLTE 166 Query: 710 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS----ALDGQEMDGRPLRVN 877 S GEVV+ TI D TGRSRGFGFV +D + LDG+ +D + + Sbjct: 167 YLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKAL 226 Query: 878 VAAERPQRGF*CGAAAES 931 E P++ F G + ++ Sbjct: 227 KGKEPPKKVFVGGLSPDT 244
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/173 (28%), Positives = 78/173 (45%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++GNLP + + + LF+Q G V ++I N +GFV + A+ AI Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIKN--------YGFVHIEDKTAAEDAIRN 54 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + Y + G +N+N VE + +S + +VGN+ + L F E+G V Sbjct: 55 LHHYKLHG--VNIN--------VEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYGPV 104 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 + IV D + FV M ED AI LD E G+ + V ++ R Sbjct: 105 IECDIVKD--------YAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSR 149
>P52272:HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M - Homo sapiens (Human)| Length = 730 Score = 70.1 bits (170), Expect = 2e-11 Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 40/216 (18%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLF-DQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 A P + + ++ N+P+DV + L L ++ G V E++ + E G+SRG V E Sbjct: 65 ANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE-GKSRGCAVVEFKMEE 123 Query: 530 EADKAIETFNRYDISGRLLNVN---------RAAQR---------------------GSR 619 KA E N++ +SGR L V RA Q+ S Sbjct: 124 SMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMITIPPSI 183 Query: 620 VERP--PRQFASSFRA-------YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGR 772 + P P + + +A +V NL ++ +L ++FS G VV A I+ D++ G+ Sbjct: 184 LNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD-GK 242 Query: 773 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 880 SRG G VT + AIS +GQ + RP+ V + Sbjct: 243 SRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 278 Score = 46.2 bits (108), Expect = 3e-04 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 GG G+ +A +++V NLP+D + L F++ G V A++ E+G+S+G G Sbjct: 639 GGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGCGV 696 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNV 592 V + E A++A N +SGR ++V Sbjct: 697 VKFESPEVAERACRMMNGMKLSGREIDV 724 Score = 45.1 bits (105), Expect = 6e-04 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Frame = +2 Query: 587 NVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH-GEVVNATIVYDRE 763 N+ R R P +++ RA++ N+P+ + L + E GEV ++ D E Sbjct: 53 NIKRGGNRFEPYANPTKRY----RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 108 Query: 764 TGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 G+SRG V +E + A L+ + GRPL+V Sbjct: 109 -GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV 144 Score = 39.7 bits (91), Expect = 0.026 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +V NLP+ L F+E G V+ A I E G+S+G G V S E + A ++ Sbjct: 656 FVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMN 713 Query: 842 GQEMDGRPLRVNV 880 G ++ GR + V + Sbjct: 714 GMKLSGREIDVRI 726
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 70.1 bits (170), Expect = 2e-11 Identities = 40/159 (25%), Positives = 75/159 (47%) Frame = +2 Query: 359 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 P K+++G L +D + L + + G V + + +G+SRGFGFV D Sbjct: 47 PTSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 106 Query: 539 KAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFS 718 K +E + + G+L++ RA + + + PP+ + +VG L + ++ + F Sbjct: 107 KVLE-LKEHKLDGKLIDPKRA--KALKGKEPPK------KVFVGGLSPDTSEEQIKEYFG 157 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 GE+ N + D +T RGF F+T +E + + + Sbjct: 158 AFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 196 Score = 55.8 bits (133), Expect = 4e-07 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S + ++G L W L + S GEVV+ TI D TGRSRGFGFV +D Sbjct: 49 SGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 108 Query: 827 IS----ALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 931 + LDG+ +D + + E P++ F G + ++ Sbjct: 109 LELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDT 147
>Q9D0E1:HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M - Mus musculus (Mouse)| Length = 729 Score = 69.7 bits (169), Expect = 2e-11 Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 40/216 (18%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLF-DQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 + P + + ++ N+P+DV + L L ++ G V E++ + E G+SRG V E Sbjct: 64 SNPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE-GKSRGCAVVEFKMEE 122 Query: 530 EADKAIETFNRYDISGRLLNVN---------RAAQR---------------------GSR 619 KA E N++ +SGR L V RA Q+ S Sbjct: 123 SMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIPPSI 182 Query: 620 VERP--PRQFASSFRA-------YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGR 772 + P P + + +A +V NL ++ +L ++FS G VV A I+ D++ G+ Sbjct: 183 LNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD-GK 241 Query: 773 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNV 880 SRG G VT + AIS +GQ + RP+ V + Sbjct: 242 SRGIGIVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 277 Score = 46.2 bits (108), Expect = 3e-04 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 GG G+ +A +++V NLP+D + L F++ G V A++ E+G+S+G G Sbjct: 638 GGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGCGV 695 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNV 592 V + E A++A N +SGR ++V Sbjct: 696 VKFESPEVAERACRMMNGMKLSGREIDV 723 Score = 45.4 bits (106), Expect = 5e-04 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Frame = +2 Query: 587 NVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH-GEVVNATIVYDRE 763 N+ R R P +++ RA++ N+P+ + L + E GEV ++ D E Sbjct: 52 NIKRGGNRFEPYSNPTKRY----RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAE 107 Query: 764 TGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 G+SRG V +E + A L+ + GRPL+V Sbjct: 108 -GKSRGCAVVEFKMEESMKKAAEVLNKHSLSGRPLKV 143 Score = 39.7 bits (91), Expect = 0.026 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +V NLP+ L F+E G V+ A I E G+S+G G V S E + A ++ Sbjct: 655 FVRNLPFDFTWKMLKDKFNECGHVLYADI--KMENGKSKGCGVVKFESPEVAERACRMMN 712 Query: 842 GQEMDGRPLRVNV 880 G ++ GR + V + Sbjct: 713 GMKLSGREIDVRI 725
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 69.3 bits (168), Expect = 3e-11 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 3/179 (1%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ +++G L V + Q+++ G ++I NR +G + G+ FV ++ EA A Sbjct: 91 QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA 150 Query: 545 IETFNRYDISG--RLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMF- 715 + + N I G L +N A+ G R + + AS + +VG+L + + +F Sbjct: 151 M-SMNNKPIPGTNHLFKLNWASGGGLREKSISK--ASEYSIFVGDLSPNVNEFDVYSLFA 207 Query: 716 SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 892 S + +A I+ D +T SRG+GFV + D SA++ + GQ RP+RV +A + Sbjct: 208 SRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPK 266
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 69.3 bits (168), Expect = 3e-11 Identities = 38/157 (24%), Positives = 76/157 (48%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ K+++G L +D + L + + G V + + +G+SRGFGFV +K Sbjct: 28 DDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKV 87 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 +E + + G+L++ RA + + + PP+ + +VG L + ++ + F Sbjct: 88 LE-LKEHKLDGKLIDPKRA--KALKGKEPPK------KVFVGGLSPDTSEEQIKEYFGAF 138 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 GE+ N + D +T RGF F+T +E + + + Sbjct: 139 GEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 175 Score = 54.3 bits (129), Expect = 1e-06 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 4/111 (3%) Frame = +2 Query: 611 GSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGF 790 GS++ Q + ++G L W L + S GEVV+ TI D TGRSRGFGF Sbjct: 17 GSKINASKNQ-QDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGF 75 Query: 791 VTMASKEDLDSAIS----ALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 931 V ++ + LDG+ +D + + E P++ F G + ++ Sbjct: 76 VLFKDAASVEKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDT 126 Score = 42.0 bits (97), Expect = 0.005 Identities = 22/66 (33%), Positives = 37/66 (56%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EPP+ KV+VG L D E++ + F G +E E+ + ++ + RGF F+T + E Sbjct: 112 EPPK--KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 169 Query: 536 DKAIET 553 K +E+ Sbjct: 170 KKLLES 175
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 68.6 bits (166), Expect = 5e-11 Identities = 40/190 (21%), Positives = 90/190 (47%) Frame = +2 Query: 329 SGGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 S + + + ++ K++VG L ++ + L F + G +E V + ++G+SRGF F Sbjct: 42 SDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAF 101 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQA 688 + + E DK + + + I+ + ++ +A R ++ +VG L + Sbjct: 102 IVFTNTEAIDK-VSAADEHIINSKKVDPKKAKARHGKI-------------FVGGLTTEI 147 Query: 689 EDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPL 868 D + F + G +V + +D++ + +GF F+T S++ + + Q++ G+ + Sbjct: 148 SDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT-PKQKIAGKEV 206 Query: 869 RVNVAAERPQ 898 V A +P+ Sbjct: 207 DVKRATPKPE 216 Score = 50.8 bits (120), Expect = 1e-05 Identities = 27/91 (29%), Positives = 46/91 (50%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L W+ + L F ++GE+ + + D +TGRSRGF F+ + E +D +SA Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK-VSA 115 Query: 836 LDGQEMDGRPLRVNVAAERPQRGF*CGAAAE 928 D ++ + + A R + F G E Sbjct: 116 ADEHIINSKKVDPKKAKARHGKIFVGGLTTE 146
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 68.2 bits (165), Expect = 7e-11 Identities = 30/78 (38%), Positives = 51/78 (65%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L ++ + L Q F+++G + +V DRET RSRGFGFVT + +D A+ A Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 836 LDGQEMDGRPLRVNVAAE 889 ++G+ +DGR +RV+ A + Sbjct: 66 MNGKSVDGRQIRVDQAGK 83 Score = 59.3 bits (142), Expect = 3e-08 Identities = 26/81 (32%), Positives = 49/81 (60%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 +E K+++G L ++ + + L Q F + G + V+ +RE+ +SRGFGFVT +++A A Sbjct: 3 DEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62 Query: 545 IETFNRYDISGRLLNVNRAAQ 607 + N + GR + V++A + Sbjct: 63 MMAMNGKSVDGRQIRVDQAGK 83
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 67.8 bits (164), Expect = 9e-11 Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 10/164 (6%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQ---SRGFGFVTMSTIEEADKAI 547 +++ NL + E L +F + G ++ + + S GFGFV E+A KA+ Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 548 ETFNRYDISGRLLNVN------RAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 + + + G L V + A +R ++ P++ +S + V N+P+QA + + Sbjct: 784 KQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTS-KILVRNIPFQANQREIRE 842 Query: 710 MFSEHGEVVNATIVYDRE-TGRSRGFGFVTMASKEDLDSAISAL 838 +FS GE+ + TG RGFGFV +K+D A +AL Sbjct: 843 LFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNAL 886 Score = 63.2 bits (152), Expect = 2e-09 Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 16/189 (8%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 EP V + P++V + + + A + VA I G G+ FV +S+ EE Sbjct: 288 EPTTPYTVKLRGAPFNVTEKNVIEFL--APLKPVAIRIVRNAHGNKTGYVFVDLSSEEEV 345 Query: 536 DKAIETFNRYDISGRLLNVNRAAQ----RGSRVERPPRQ------------FASSFRAYV 667 KA++ NR + GR + V R Q RG P Q A S R +V Sbjct: 346 KKALKC-NRDYMGGRYIEVFREKQAPTARGPPKSTTPWQGRTLGENEEEEDLADSGRLFV 404 Query: 668 GNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 NL + + + L ++FS +G + D T + +GF FVT E A + +DGQ Sbjct: 405 RNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQ 464 Query: 848 EMDGRPLRV 874 GR L V Sbjct: 465 VFQGRMLHV 473 Score = 38.5 bits (88), Expect = 0.058 Identities = 21/64 (32%), Positives = 35/64 (54%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 +++ V NLP + ER QLF G + + + ++ G+ R FGF+ + EEA A+ Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQAALN 60 Query: 551 TFNR 562 F+R Sbjct: 61 HFHR 64 Score = 38.1 bits (87), Expect = 0.076 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGR---SRGFGFVTMASKEDLDSAIS 832 ++ NL + + L +FS+ G + + TI + S GFGFV E A+ Sbjct: 725 FIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALK 784 Query: 833 ALDGQEMDGRPLRVNVA 883 L G +DG L V ++ Sbjct: 785 QLQGHTVDGHKLEVRIS 801 Score = 35.4 bits (80), Expect = 0.49 Identities = 17/59 (28%), Positives = 35/59 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 R V NLP ++ R Q+F+ G + + ++ + ++ G+ R FGF+ S+E+ +A++ Sbjct: 3 RLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQAALN 60 Score = 35.4 bits (80), Expect = 0.49 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRE-SGQSRGFGFVTMSTIEEADKA 544 +K+ V N+P+ + + +LF G ++ + +G RGFGFV T ++A KA Sbjct: 824 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 882
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 67.8 bits (164), Expect = 9e-11 Identities = 41/166 (24%), Positives = 81/166 (48%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + K+++G L + + L F + G + V+ + + +SRGFGFVT + DK Sbjct: 19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + +++ + ++ A R ++ P+ + + +VG L + Q F + Sbjct: 79 LGQ-PHHELDSKTIDPKVAFPRRAQ----PKMVTRTKKIFVGGLSANTVVEDVKQYFEQF 133 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 G+V +A +++D+ T R RGFGFVT ED+ + + E++ + Sbjct: 134 GKVEDAMLMFDKTTNRHRGFGFVTF-ENEDVVEKVCEIHFHEINNK 178 Score = 51.6 bits (122), Expect = 7e-06 Identities = 27/79 (34%), Positives = 39/79 (49%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L WQ L FS+ GE+ ++ D T RSRGFGFVT A +D + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81 Query: 836 LDGQEMDGRPLRVNVAAER 892 E+D + + VA R Sbjct: 82 -PHHELDSKTIDPKVAFPR 99 Score = 45.8 bits (107), Expect = 4e-04 Identities = 23/76 (30%), Positives = 45/76 (59%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG L + E + Q F+Q G VE A +++++ + + RGFGFVT + +K E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE- 169 Query: 554 FNRYDISGRLLNVNRA 601 + ++I+ +++ +A Sbjct: 170 IHFHEINNKMVECKKA 185
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 67.8 bits (164), Expect = 9e-11 Identities = 41/166 (24%), Positives = 81/166 (48%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + K+++G L + + L F + G + V+ + + +SRGFGFVT + DK Sbjct: 19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + +++ + ++ A R ++ P+ + + +VG L + Q F + Sbjct: 79 LGQ-PHHELDSKTIDPKVAFPRRAQ----PKMVTRTKKIFVGGLSANTVVEDVKQYFEQF 133 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 G+V +A +++D+ T R RGFGFVT ED+ + + E++ + Sbjct: 134 GKVEDAMLMFDKTTNRHRGFGFVTF-ENEDVVEKVCEIHFHEINNK 178 Score = 51.6 bits (122), Expect = 7e-06 Identities = 27/79 (34%), Positives = 39/79 (49%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L WQ L FS+ GE+ ++ D T RSRGFGFVT A +D + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81 Query: 836 LDGQEMDGRPLRVNVAAER 892 E+D + + VA R Sbjct: 82 -PHHELDSKTIDPKVAFPR 99 Score = 45.8 bits (107), Expect = 4e-04 Identities = 23/76 (30%), Positives = 45/76 (59%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG L + E + Q F+Q G VE A +++++ + + RGFGFVT + +K E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE- 169 Query: 554 FNRYDISGRLLNVNRA 601 + ++I+ +++ +A Sbjct: 170 IHFHEINNKMVECKKA 185
>P37838:NOP4_YEAST Nucleolar protein 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 685 Score = 67.4 bits (163), Expect = 1e-10 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 29/201 (14%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++V ++P DV E+LA F ++ A V+ + +SRGFGFV+ + ++ +A+ Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNK-RSRGFGFVSFAVEDDTKEALAKA 86 Query: 557 NRYDISGRLLNVNRAAQRGSR------VERPPRQFASSF--------------------- 655 + +G +L V+ A +R VE+ + + Sbjct: 87 RKTKFNGHILRVDIAKRRDRSKKTSEVVEKSTPESSEKITGQNNEDEDDADGEDSMLKGK 146 Query: 656 -RAYVGNLPWQAEDS-RLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 + + N+PW D +L ++F +G VV ATI R+ G+ GF FVTM + A+ Sbjct: 147 PKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRD-GKLCGFAFVTMKKISNCRIAL 205 Query: 830 SALDGQEMDGRPLRVNVAAER 892 ++DGR + V+ A ++ Sbjct: 206 ENTKDLKIDGRKVAVDFAVQK 226 Score = 48.5 bits (114), Expect = 6e-05 Identities = 46/202 (22%), Positives = 72/202 (35%), Gaps = 50/202 (24%) Frame = +2 Query: 374 KVYVGNLPYDV-DSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 K+ + N+P+ D +L ++F + G V V I + G+ GF FVTM I A+E Sbjct: 148 KLIIRNMPWSCRDPVKLKKIFGRYGTV-VEATIPRKRDGKLCGFAFVTMKKISNCRIALE 206 Query: 551 TFNRYDISGRLLNVNRAAQ----------------------------------------- 607 I GR + V+ A Q Sbjct: 207 NTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDNESGNEDAEENHDDEEDENEEE 266 Query: 608 --------RGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRE 763 + +R + F +V N+P+ A + L FS+ G V A V D+ Sbjct: 267 DRQVDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKS 326 Query: 764 TGRSRGFGFVTMASKEDLDSAI 829 TG ++G FV + + I Sbjct: 327 TGLAKGTAFVAFKDQYTYNECI 348 Score = 38.9 bits (89), Expect = 0.044 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 15/146 (10%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM-------ST 523 E+ V+V N+PYD E LA F + G V+ A + ++ +G ++G FV Sbjct: 288 EDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNEC 347 Query: 524 IEEADKAIET--------FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLP 679 I+ A A T Y GR+L++ R R + A+ + +G P Sbjct: 348 IKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVR-EDAGRMAEKNAAKRKEALGKAP 406 Query: 680 WQAEDSRLVQMFSEHGEVVNATIVYD 757 + +D R + + +E G VV + + D Sbjct: 407 GE-KDRRNLYLLNE-GRVVEGSKMAD 430
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 67.4 bits (163), Expect = 1e-10 Identities = 40/149 (26%), Positives = 75/149 (50%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 EE K+++G L +D + L F + G V + + +G+SRGFGFV E DK Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 ++ + ++G++++ RA + + + P + + +VG L + ++ + F Sbjct: 155 MDQ-KEHKLNGKVIDPKRA--KAMKTKEPVK------KIFVGGLSPDTPEEKIREYFGGF 205 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKE 811 GEV + + D +T + RGF F+T +E Sbjct: 206 GEVESIELPMDNKTNKRRGFCFITFKEEE 234 Score = 53.1 bits (126), Expect = 2e-06 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 ++ ++G L W L FS+ GEVV+ T+ D TGRSRGFGFV E +D + Sbjct: 97 WKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD 156 Query: 833 ----ALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 931 L+G+ +D + + E ++ F G + ++ Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDT 193 Score = 39.3 bits (90), Expect = 0.034 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T EP + K++VG L D E++ + F G VE E+ + ++ + RGF F+T E Sbjct: 177 TKEPVK--KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234 Query: 530 EADKAIE 550 K +E Sbjct: 235 PVKKIME 241
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 67.4 bits (163), Expect = 1e-10 Identities = 40/149 (26%), Positives = 75/149 (50%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 EE K+++G L +D + L F + G V + + +G+SRGFGFV E DK Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 ++ + ++G++++ RA + + + P + + +VG L + ++ + F Sbjct: 155 MDQ-KEHKLNGKVIDPKRA--KAMKTKEPVK------KIFVGGLSPDTPEEKIREYFGGF 205 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKE 811 GEV + + D +T + RGF F+T +E Sbjct: 206 GEVESIELPMDNKTNKRRGFCFITFKEEE 234 Score = 53.1 bits (126), Expect = 2e-06 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 ++ ++G L W L FS+ GEVV+ T+ D TGRSRGFGFV E +D + Sbjct: 97 WKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD 156 Query: 833 ----ALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 931 L+G+ +D + + E ++ F G + ++ Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDT 193 Score = 39.3 bits (90), Expect = 0.034 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T EP + K++VG L D E++ + F G VE E+ + ++ + RGF F+T E Sbjct: 177 TKEPVK--KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 234 Query: 530 EADKAIE 550 K +E Sbjct: 235 PVKKIME 241
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 67.0 bits (162), Expect = 2e-10 Identities = 46/152 (30%), Positives = 73/152 (48%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G L E L + Q G V V+ + + +SRGFGF+T + D+A E Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + I G+ + RA R R R S + +VG L ++ L + F + G V Sbjct: 93 -RPHIIDGKTVEAKRALPRPERESRETN--ISVKKLFVGGLKDNHDEECLREYFLQFGNV 149 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 V+ ++ D+ TG+ RGF FV + +D AI Sbjct: 150 VSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus| (Rat) Length = 353 Score = 67.0 bits (162), Expect = 2e-10 Identities = 40/149 (26%), Positives = 75/149 (50%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 EE K+++G L +D + L F + G V + + +G+SRGFGFV E DK Sbjct: 93 EEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 ++ + ++G++++ RA + + + P + + +VG L + ++ + F Sbjct: 153 MDQ-KEHKLNGKVIDPKRA--KAMKTKEPVK------KIFVGGLSPDTPEEKIREYFGGF 203 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKE 811 GEV + + D +T + RGF F+T +E Sbjct: 204 GEVESIELPMDNKTNKRRGFCFITFKEEE 232 Score = 52.0 bits (123), Expect = 5e-06 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Frame = +2 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAIS 832 ++ ++G L W L FS+ G+VV+ T+ D TGRSRGFGFV E +D + Sbjct: 95 WKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD 154 Query: 833 ----ALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 931 L+G+ +D + + E ++ F G + ++ Sbjct: 155 QKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDT 191 Score = 39.3 bits (90), Expect = 0.034 Identities = 22/67 (32%), Positives = 35/67 (52%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T EP + K++VG L D E++ + F G VE E+ + ++ + RGF F+T E Sbjct: 175 TKEPVK--KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEE 232 Query: 530 EADKAIE 550 K +E Sbjct: 233 PVKKIME 239
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 66.2 bits (160), Expect = 3e-10 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + ++ L FS G + +V DRET RSRGFGF+T + E A+ A Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 836 LDGQEMDGRPLRVNVAAE--RPQRG 904 ++G+ +DGR +RV+ A + R RG Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSRG 91 Score = 62.0 bits (149), Expect = 5e-09 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 EE K++VG L ++ D + L F G + V+ +RE+ +SRGFGF+T + E A A Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63 Query: 545 IETFNRYDISGRLLNVNRAAQ--RGSR 619 + N + GR + V+ A + RGSR Sbjct: 64 MRAMNGESLDGRQIRVDHAGKSARGSR 90
>P38922:HRB1_YEAST Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 454 Score = 66.2 bits (160), Expect = 3e-10 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 8/174 (4%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 ++VGNL YD E L + F Q G V A++I +R G RG G V + ++ D+AI + Sbjct: 163 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQY 220 Query: 557 NRYDISGRLLNV--------NRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 + R + V N +R + R + V NLP L + Sbjct: 221 DGAFFMDRKIFVRQDNPPPSNNIKERKALDRGELRHNRKTHEVIVKNLPASVNWQALKDI 280 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 F E G V +A + D + G S G G V+ +DL AI +G ++G L V Sbjct: 281 FKECGNVAHADVELDGD-GVSTGSGTVSFYDIKDLHRAIEKYNGYSIEGNVLDV 333 Score = 62.4 bits (150), Expect = 4e-09 Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 22/204 (10%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 D G + +V V NLP V+ + L +F + G V A+V + + G S G G V+ Sbjct: 250 DRGELRHNRKTHEVIVKNLPASVNWQALKDIFKECGNVAHADVELDGD-GVSTGSGTVSF 308 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQ--------------RGSRVERPPRQFASSF 655 I++ +AIE +N Y I G +L+V S V R+F + Sbjct: 309 YDIKDLHRAIEKYNGYSIEGNVLDVKSKESVHNHSDGDDVDIPMDDSPVNEEARKFTENV 368 Query: 656 RA--------YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKE 811 Y NLP+ S L +F G+V NA + YD + G G V + + Sbjct: 369 VGGGERNRLIYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDSK-GAPTGIAVVEYDNVD 427 Query: 812 DLDSAISALDGQEMDGRPLRVNVA 883 D D I L+ G L ++ A Sbjct: 428 DADVCIERLNNYNYGGCDLDISYA 451
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 65.9 bits (159), Expect = 3e-10 Identities = 33/82 (40%), Positives = 51/82 (62%) Frame = +2 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 S + Y+G L ++ L FS V A ++ ++ TGRSRG+GFV S++ +SAI Sbjct: 30 STKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAI 89 Query: 830 SALDGQEMDGRPLRVNVAAERP 895 SA++GQE++G + VNVA + P Sbjct: 90 SAMNGQELNGFNISVNVAKDWP 111 Score = 50.1 bits (118), Expect = 2e-05 Identities = 26/76 (34%), Positives = 41/76 (53%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+Y+G L D L F V A V+ N+ +G+SRG+GFV + + A+ AI Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91 Query: 554 FNRYDISGRLLNVNRA 601 N +++G ++VN A Sbjct: 92 MNGQELNGFNISVNVA 107
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 65.5 bits (158), Expect = 4e-10 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L + ++ L FS G + +V DRET RSRGFGF+T + E A+ A Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 836 LDGQEMDGRPLRVNVAAE--RPQRGF*CGA 919 ++G+ +DGR +RV+ A + R RG GA Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRGGGFGA 96 Score = 60.5 bits (145), Expect = 1e-08 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 EE K++VG L ++ D + L F G + V+ +RE+ +SRGFGF+T + E A A Sbjct: 4 EEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63 Query: 545 IETFNRYDISGRLLNVNRAAQ--RGSR 619 + N + GR + V+ A + RG+R Sbjct: 64 MRAMNGESLDGRQIRVDHAGKSARGTR 90
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 65.5 bits (158), Expect = 4e-10 Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 17/186 (9%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVE-----------------VAEVIYNRESGQSR 496 E V+VGNLP + ++L F + G VE +A + Q Sbjct: 188 ERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKS 247 Query: 497 GFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 +V A KA++ G + V+ A++ SR +R +VGNL Sbjct: 248 INAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASRDKRS---------VFVGNL 298 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 P++ EDS L + F + G +V IV + TG RGFG+V + + + A+ L+ E+ Sbjct: 299 PYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALK-LNNSELM 357 Query: 857 GRPLRV 874 GR LRV Sbjct: 358 GRKLRV 363 Score = 49.3 bits (116), Expect = 3e-05 Identities = 24/82 (29%), Positives = 42/82 (51%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ V+VGNLPY ++ L + F G + ++ N +G RGFG+V + A Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 348 Query: 545 IETFNRYDISGRLLNVNRAAQR 610 ++ N ++ GR L V R+ + Sbjct: 349 LK-LNNSELMGRKLRVMRSVNK 369
>Q5AJS6:MRD1_CANAL Multiple RNA-binding domain-containing protein 1 - Candida albicans| (Yeast) Length = 841 Score = 64.7 bits (156), Expect = 8e-10 Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 6/180 (3%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYN---RESGQ--SRGFGFVTMSTIEEADK 541 V+V NL + + L+ LF VA V + SG+ S GFGFV T E+A+ Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVERPP-RQFASSFRAYVGNLPWQAEDSRLVQMFS 718 AI T + + + G L + + ++G+ ++ S + + NLP++A L+++F Sbjct: 679 AISTLDGHVLDGHKLQLKLSHKQGTGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFG 738 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 898 G++ + + + +RGF FV ++ ++A+S L+G + GR L + A + P+ Sbjct: 739 AFGQLKSVRVPKKFDQS-ARGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAEQDPE 797 Score = 50.8 bits (120), Expect = 1e-05 Identities = 25/84 (29%), Positives = 44/84 (52%) Frame = +2 Query: 623 ERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMA 802 E+ ++ + R ++ N+ ++A + +FS++G + I D TG+S+GF +V Sbjct: 300 EQIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFL 359 Query: 803 SKEDLDSAISALDGQEMDGRPLRV 874 KED A +LD Q GR L + Sbjct: 360 KKEDATRAYRSLDKQIFQGRLLHI 383 Score = 48.1 bits (113), Expect = 7e-05 Identities = 21/76 (27%), Positives = 41/76 (53%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 E ++++ N+ Y+ E LF Q G +E + + +G+S+GF +V E+A +A Sbjct: 308 ETGRLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRA 367 Query: 545 IETFNRYDISGRLLNV 592 + ++ GRLL++ Sbjct: 368 YRSLDKQIFQGRLLHI 383 Score = 39.3 bits (90), Expect = 0.034 Identities = 25/99 (25%), Positives = 46/99 (46%) Frame = +2 Query: 329 SGGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 +G A + + +K+ + NLP++ + L +LF G ++ V + +RGF F Sbjct: 703 TGTSASSIKKSGKSSKIIIKNLPFEATRKDLLELFGAFGQLKSVRVPKKFDQS-ARGFAF 761 Query: 509 VTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVE 625 V + ++EA+ A+ + GR L + A Q E Sbjct: 762 VEFNLMKEAETAMSQLEGVHLLGRRLVMQYAEQDPENAE 800 Score = 36.2 bits (82), Expect = 0.29 Identities = 21/77 (27%), Positives = 41/77 (53%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 +++ V LP E+L + F + G V +++ R +G+SR F F+ + + A++A++ Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKR-NGESRKFAFIGYKSADAAERAVK 60 Query: 551 TFNRYDISGRLLNVNRA 601 FN+ I + V A Sbjct: 61 YFNKSFIDTARIEVEFA 77
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 64.3 bits (155), Expect = 1e-09 Identities = 41/177 (23%), Positives = 87/177 (49%), Gaps = 3/177 (1%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 +VYVG++ +++ + + F G ++ + ++ + + +GF FV E A A+E Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 554 FNRYDISGRLLNVNRAAQ--RGSRVERPPRQFASSF-RAYVGNLPWQAEDSRLVQMFSEH 724 N + GR + V R + + +V ++ A SF R YV ++ + + +F Sbjct: 191 MNGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVFEAF 250 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERP 895 G ++ + +G+GF+ A+K+ +D AI++++ ++ G+ LRV + P Sbjct: 251 GPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRSITPP 307
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 63.9 bits (154), Expect = 1e-09 Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 17/186 (9%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVE-----------------VAEVIYNRESGQSR 496 E V+VGNLP + ++L F + G +E +A + Q Sbjct: 184 ERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKN 243 Query: 497 GFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 +V A +A++ G + V+ A++ SR +R +VGNL Sbjct: 244 INAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS---------VFVGNL 294 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 P++ E+S + + F + G ++ IV D+ TG +GFG+V + + + A+ L+ E+ Sbjct: 295 PYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALK-LNNSELM 353 Query: 857 GRPLRV 874 GR LRV Sbjct: 354 GRKLRV 359 Score = 47.4 bits (111), Expect = 1e-04 Identities = 22/82 (26%), Positives = 43/82 (52%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ V+VGNLPY V+ + + F G + ++ ++ +G +GFG+V + A Sbjct: 285 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344 Query: 545 IETFNRYDISGRLLNVNRAAQR 610 ++ N ++ GR L V R+ + Sbjct: 345 LK-LNNSELMGRKLRVMRSVNK 365
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 63.2 bits (152), Expect = 2e-09 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 17/186 (9%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVE-----------------VAEVIYNRESGQSR 496 E V+VGNLP + ++L F + G VE +A + Q Sbjct: 182 ERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKS 241 Query: 497 GFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 +V A KA++ G + V+ A++ SR +R +VGNL Sbjct: 242 INAYVVFKEERAAAKALQRNGAQIAEGFRIRVDLASETASRDKRS---------VFVGNL 292 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 P++ ++S L + F + G +V IV + TG RGFG+V + + + A+ L+ E+ Sbjct: 293 PYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALK-LNNSELM 351 Query: 857 GRPLRV 874 GR LRV Sbjct: 352 GRKLRV 357 Score = 50.8 bits (120), Expect = 1e-05 Identities = 26/82 (31%), Positives = 42/82 (51%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 ++ V+VGNLPY VD L + F G + ++ N +G RGFG+V + A Sbjct: 283 DKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLA 342 Query: 545 IETFNRYDISGRLLNVNRAAQR 610 ++ N ++ GR L V R+ + Sbjct: 343 LK-LNNSELMGRKLRVMRSVNK 363
>Q76LC6:RBM24_DANRE RNA-binding protein 24 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 230 Score = 63.2 bits (152), Expect = 2e-09 Identities = 32/76 (42%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ DS L + F GE+ A ++ DR+TG+SRG+GFVTMA + D A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 72 -PNPIIDGRKANVNLA 86 Score = 62.0 bits (149), Expect = 5e-09 Identities = 34/76 (44%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ AD+A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos| taurus (Bovine) Length = 403 Score = 62.0 bits (149), Expect = 5e-09 Identities = 39/160 (24%), Positives = 70/160 (43%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +Y+ LP + + L +L G + + I ++ + + +G+GFV + A KA+ Sbjct: 61 KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAV 120 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + AQ + E+ P Y+ NLP ++ L M G Sbjct: 121 SALKASGVQ---------AQMAKQQEQDPTNL------YISNLPLSMDEQELENMLKPFG 165 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 +V++ I+ D +G SRG GF M S E ++ I +G+ Sbjct: 166 QVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S Y+ LP D LV++ +G++V+ + D+ T + +G+GFV S A Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKA 119 Query: 827 ISAL 838 +SAL Sbjct: 120 VSAL 123
>Q6CEW9:MRD1_YARLI Multiple RNA-binding domain-containing protein 1 - Yarrowia| lipolytica (Candida lipolytica) Length = 828 Score = 62.0 bits (149), Expect = 5e-09 Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 7/189 (3%) Frame = +2 Query: 338 DAGYTAEPPEEAK--VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQ-----SR 496 D G E P A V+V NL + S L F VA+V +S S Sbjct: 592 DTGSNDERPATASTSVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSM 651 Query: 497 GFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 GFGFV S+ E A+ A + + + + G L + + + RG E + A + + NL Sbjct: 652 GFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQL-KISNRGQDEETTETKKAIDSKILIKNL 710 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 P++A + ++F G + + + SRGF F S ++ + A+SAL G + Sbjct: 711 PFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAMSALQGTHLL 769 Query: 857 GRPLRVNVA 883 GR L + A Sbjct: 770 GRRLVLQYA 778 Score = 44.3 bits (103), Expect = 0.001 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 R ++ NL + A++ Q+FS++GE+ + + +TG+ +GF V E+ +A A Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361 Query: 836 LDGQEMDGRPLRV 874 DG+ GR L + Sbjct: 362 QDGKIFQGRLLHI 374 Score = 42.4 bits (98), Expect = 0.004 Identities = 24/73 (32%), Positives = 36/73 (49%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 ++++ NL Y E QLF Q G +E + N ++GQ +GF V E A A E Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361 Query: 554 FNRYDISGRLLNV 592 + GRLL++ Sbjct: 362 QDGKIFQGRLLHI 374 Score = 38.9 bits (89), Expect = 0.044 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Frame = +2 Query: 584 LNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRE 763 L+ + GS ERP +S +V NL ++ L F + A + + Sbjct: 585 LSASDVMDTGSNDERPA---TASTSVFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPD 641 Query: 764 TGR-----SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 + S GFGFV +SKE + A A+DG +DG L++ ++ Sbjct: 642 SKNKGKFLSMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKIS 686 Score = 38.1 bits (87), Expect = 0.076 Identities = 22/86 (25%), Positives = 42/86 (48%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 ++K+ + NLP++ + + +LF G ++ V + + +SRGF F + +EA+ A+ Sbjct: 702 DSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAM 760 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVE 625 + GR L + A S E Sbjct: 761 SALQGTHLLGRRLVLQYAQADASNAE 786
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 61.6 bits (148), Expect = 6e-09 Identities = 38/160 (23%), Positives = 70/160 (43%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +Y+ LP + + L +L G + + I ++ + + +G+GFV + A KA+ Sbjct: 61 KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV 120 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + AQ + E+ P Y+ NLP ++ L M G Sbjct: 121 SALKASGVQ---------AQMAKQQEQDPTNL------YISNLPLSMDEQELENMLKPFG 165 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 +V++ ++ D +G SRG GF M S E ++ I +G+ Sbjct: 166 QVISTRVLRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S Y+ LP D LV++ +G++V+ + D+ T + +G+GFV S A Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKA 119 Query: 827 ISAL 838 +SAL Sbjct: 120 VSAL 123
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 61.6 bits (148), Expect = 6e-09 Identities = 38/160 (23%), Positives = 70/160 (43%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +Y+ LP + + L +L G + + I ++ + + +G+GFV + A KA+ Sbjct: 61 KTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAV 120 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + AQ + E+ P Y+ NLP ++ L M G Sbjct: 121 SALKANGVQ---------AQMAKQQEQDPTNL------YISNLPLSMDEQELENMLKPFG 165 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 +V++ ++ D +G SRG GF M S E ++ I +G+ Sbjct: 166 QVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHFNGK 204 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S Y+ LP D LV++ +G++V+ + D+ T + +G+GFV S A Sbjct: 60 SKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKA 119 Query: 827 ISAL 838 +SAL Sbjct: 120 VSAL 123
>Q7TP47:HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q - Rattus norvegicus (Rat)| Length = 533 Score = 61.6 bits (148), Expect = 6e-09 Identities = 38/153 (24%), Positives = 80/153 (52%), Gaps = 2/153 (1%) Frame = +2 Query: 338 DAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 D+ Y+ + P +++VG +P D+ + L LF++AG + ++ + +G +RG+ FVT Sbjct: 60 DSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVT 119 Query: 515 MSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 T E A +A++ +N ++I SG+ + V + ++ R +VG++P Sbjct: 120 FCTKEAAQEAVKLYNNHEIRSGKHIGVCIS--------------VANNRLFVGSIPKSKT 165 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGF 790 ++++ FS+ E + I+Y + + + GF Sbjct: 166 KEQILEEFSKVTEGLTDVILYHQPDDKKKNRGF 198 Score = 42.7 bits (99), Expect = 0.003 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +VG +P + LV +F + G + + ++ D TG +RG+ FVT +KE A+ + Sbjct: 75 FVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN 134 Query: 842 GQEM-DGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQK----TEACHH 1006 E+ G+ + V C + A + + S T E +L++ TE Sbjct: 135 NHEIRSGKHIGV------------CISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTD 182 Query: 1007 LKLPH*PPD 1033 + L H P D Sbjct: 183 VILYHQPDD 191
>Q7TMK9:HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q - Mus musculus (Mouse)| Length = 623 Score = 61.6 bits (148), Expect = 6e-09 Identities = 38/153 (24%), Positives = 80/153 (52%), Gaps = 2/153 (1%) Frame = +2 Query: 338 DAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 D+ Y+ + P +++VG +P D+ + L LF++AG + ++ + +G +RG+ FVT Sbjct: 150 DSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVT 209 Query: 515 MSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 T E A +A++ +N ++I SG+ + V + ++ R +VG++P Sbjct: 210 FCTKEAAQEAVKLYNNHEIRSGKHIGVCIS--------------VANNRLFVGSIPKSKT 255 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGF 790 ++++ FS+ E + I+Y + + + GF Sbjct: 256 KEQILEEFSKVTEGLTDVILYHQPDDKKKNRGF 288 Score = 42.7 bits (99), Expect = 0.003 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +VG +P + LV +F + G + + ++ D TG +RG+ FVT +KE A+ + Sbjct: 165 FVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN 224 Query: 842 GQEM-DGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQK----TEACHH 1006 E+ G+ + V C + A + + S T E +L++ TE Sbjct: 225 NHEIRSGKHIGV------------CISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTD 272 Query: 1007 LKLPH*PPD 1033 + L H P D Sbjct: 273 VILYHQPDD 281
>O60506:HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q - Homo sapiens (Human)| Length = 623 Score = 61.6 bits (148), Expect = 6e-09 Identities = 38/153 (24%), Positives = 80/153 (52%), Gaps = 2/153 (1%) Frame = +2 Query: 338 DAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVT 514 D+ Y+ + P +++VG +P D+ + L LF++AG + ++ + +G +RG+ FVT Sbjct: 150 DSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVT 209 Query: 515 MSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 T E A +A++ +N ++I SG+ + V + ++ R +VG++P Sbjct: 210 FCTKEAAQEAVKLYNNHEIRSGKHIGVCIS--------------VANNRLFVGSIPKSKT 255 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGF 790 ++++ FS+ E + I+Y + + + GF Sbjct: 256 KEQILEEFSKVTEGLTDVILYHQPDDKKKNRGF 288 Score = 42.7 bits (99), Expect = 0.003 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 5/129 (3%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +VG +P + LV +F + G + + ++ D TG +RG+ FVT +KE A+ + Sbjct: 165 FVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYN 224 Query: 842 GQEM-DGRPLRVNVAAERPQRGF*CGAAAESMAWRFSWTHGNTAEMLLQK----TEACHH 1006 E+ G+ + V C + A + + S T E +L++ TE Sbjct: 225 NHEIRSGKHIGV------------CISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTD 272 Query: 1007 LKLPH*PPD 1033 + L H P D Sbjct: 273 VILYHQPDD 281
>Q6PDU1:SFRS2_RAT Splicing factor, arginine/serine-rich 2 - Rattus norvegicus (Rat)| Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 40.4 bits (93), Expect = 0.015 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 634 +A+ A++ + + GR L V A R RPP Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA-----RYGRPP 96
>Q06A98:SFRS2_PIG Splicing factor, arginine/serine-rich 2 - Sus scrofa (Pig)| Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 40.4 bits (93), Expect = 0.015 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 634 +A+ A++ + + GR L V A R RPP Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA-----RYGRPP 96
>Q5R1W5:SFRS2_PANTR Splicing factor, arginine/serine-rich 2 - Pan troglodytes| (Chimpanzee) Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 40.4 bits (93), Expect = 0.015 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 634 +A+ A++ + + GR L V A R RPP Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA-----RYGRPP 96
>Q62093:SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 - Mus musculus (Mouse)| Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 40.4 bits (93), Expect = 0.015 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 634 +A+ A++ + + GR L V A R RPP Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA-----RYGRPP 96
>Q01130:SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 - Homo sapiens (Human)| Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 40.4 bits (93), Expect = 0.015 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 634 +A+ A++ + + GR L V A R RPP Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA-----RYGRPP 96
>P30352:SFRS2_CHICK Splicing factor, arginine/serine-rich 2 - Gallus gallus (Chicken)| Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 43.5 bits (101), Expect = 0.002 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 9/111 (8%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAA------QRGSRVERPPRQFASS 652 +A+ A++ + + GR L V A SR PPR++ SS Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSS 113
>Q3MHR5:SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 - Bos taurus (Bovine)| Length = 221 Score = 61.2 bits (147), Expect = 8e-09 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 626 RPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMAS 805 RPP V NL ++ L ++F ++G V + I DR T SRGF FV Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64 Query: 806 KEDLDSAISALDGQEMDGRPLRVNVA 883 K D + A+ A+DG +DGR LRV +A Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMA 90 Score = 40.4 bits (93), Expect = 0.015 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Frame = +2 Query: 347 YTAEPPEE---AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 Y PP+ + V NL Y + L ++F++ G V + +R + +SRGF FV Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 634 +A+ A++ + + GR L V A R RPP Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA-----RYGRPP 96
>P29558:RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 - Homo| sapiens (Human) Length = 406 Score = 61.2 bits (147), Expect = 8e-09 Identities = 39/160 (24%), Positives = 69/160 (43%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +Y+ LP + L +L G + + I ++ + + +G+GFV + A KA+ Sbjct: 61 KTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAV 120 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + AQ + E+ P Y+ NLP ++ L M G Sbjct: 121 SALKASGVQ---------AQMAKQQEQDPTNL------YISNLPLSMDEQELENMLKPFG 165 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQ 847 +V++ I+ D +G SRG GF M S E ++ I +G+ Sbjct: 166 QVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S Y+ LP D LV++ +G++V+ + D+ T + +G+GFV S A Sbjct: 60 SKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKA 119 Query: 827 ISAL 838 +SAL Sbjct: 120 VSAL 123
>Q923K9:ACF_RAT APOBEC1 complementation factor - Rattus norvegicus (Rat)| Length = 594 Score = 61.2 bits (147), Expect = 8e-09 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 4/162 (2%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 G G+ PPE ++++G LP D+ + L L ++ G + ++ + +G +RG+ F Sbjct: 42 GPPPGWDTTPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDF-NGNNRGYAF 100 Query: 509 VTMSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 VT S +EA AI+ N Y+I +GRLL V + + R +VG +P Sbjct: 101 VTFSNKQEAKNAIKQLNNYEIRNGRLLGVCAS--------------VDNCRLFVGGIPKT 146 Query: 686 AEDSRLVQMFSEHGEVVNATIVYD--RETGRSRGFGFVTMAS 805 + ++ + E V IVY + ++RGF FV S Sbjct: 147 KKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYES 188 Score = 41.2 bits (95), Expect = 0.009 Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 6/179 (3%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQA--GVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 + +++VG +P E + + GVV+V + ++RGF FV + A Sbjct: 134 DNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAA 193 Query: 539 KAIETF--NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 A R + G + V+ A VE +S YV NL + + + Sbjct: 194 MARRRLLPGRIQLWGHPIAVDWAEPE---VEVDEDTMSSVKILYVRNLMLSTSEEMIEKE 250 Query: 713 FS--EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 F+ + G V + R + FV +++ED A+ AL+G+ +DG P+ V +A Sbjct: 251 FNSIKPGAV--------ERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301 Score = 38.1 bits (87), Expect = 0.076 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 ++G LP + L+ + + G++ ++ D G +RG+ FVT ++K++ +AI L+ Sbjct: 59 FIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKQEAKNAIKQLN 117 Query: 842 GQEM-DGRPLRV 874 E+ +GR L V Sbjct: 118 NYEIRNGRLLGV 129
>Q9NQ94:ACF_HUMAN APOBEC1 complementation factor - Homo sapiens (Human)| Length = 594 Score = 61.2 bits (147), Expect = 8e-09 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 4/162 (2%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 G G+ A PPE ++++G LP D+ + L L ++ G + ++ + +G +RG+ F Sbjct: 42 GPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDF-NGNNRGYAF 100 Query: 509 VTMSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 VT S EA AI+ N Y+I +GRLL V + + R +VG +P Sbjct: 101 VTFSNKVEAKNAIKQLNNYEIRNGRLLGVCAS--------------VDNCRLFVGGIPKT 146 Query: 686 AEDSRLVQMFSEHGEVVNATIVYD--RETGRSRGFGFVTMAS 805 + ++ + E V IVY + ++RGF FV S Sbjct: 147 KKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYES 188 Score = 40.8 bits (94), Expect = 0.012 Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 4/177 (2%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQA--GVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 + +++VG +P E + + GVV+V + ++RGF FV + A Sbjct: 134 DNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAA 193 Query: 539 KAIETF--NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 A R + G + V+ A VE +S YV NL + + + Sbjct: 194 MARRKLLPGRIQLWGHGIAVDWAEPE---VEVDEDTMSSVKILYVRNLMLSTSEEMIEKE 250 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 F+ N + R + FV +++ED A+ AL+G+ +DG P+ V +A Sbjct: 251 FN------NIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301 Score = 36.6 bits (83), Expect = 0.22 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 ++G LP + L+ + + G++ ++ D G +RG+ FVT ++K + +AI L+ Sbjct: 59 FIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKVEAKNAIKQLN 117 Query: 842 GQEM-DGRPLRV 874 E+ +GR L V Sbjct: 118 NYEIRNGRLLGV 129
>Q62176:RBM38_MOUSE RNA-binding protein 38 - Mus musculus (Mouse)| Length = 237 Score = 60.8 bits (146), Expect = 1e-08 Identities = 34/76 (44%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ AD+A + Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 93 PNPI-IDGRKANVNLA 107 Score = 60.5 bits (145), Expect = 1e-08 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ D+ L + F G++ A ++ DR+TG+SRG+GFVTMA + D A Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 93 -PNPIIDGRKANVNLA 107
>Q5R9H4:ACF_PONPY APOBEC1 complementation factor - Pongo pygmaeus (Orangutan)| Length = 587 Score = 60.8 bits (146), Expect = 1e-08 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 4/162 (2%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 G G+ A PPE ++++G LP D+ + L L ++ G + ++ + +G +RG+ F Sbjct: 42 GPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDF-NGNNRGYAF 100 Query: 509 VTMSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 VT S EA AI+ N Y+I +GRLL V + + R +VG +P Sbjct: 101 VTFSNKLEAKNAIKQLNNYEIRNGRLLGVCAS--------------VDNCRLFVGGIPKT 146 Query: 686 AEDSRLVQMFSEHGEVVNATIVYD--RETGRSRGFGFVTMAS 805 + ++ + E V IVY + ++RGF FV S Sbjct: 147 KKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYES 188 Score = 41.2 bits (95), Expect = 0.009 Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 4/177 (2%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQA--GVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 + +++VG +P E + + GVV+V + ++RGF FV + A Sbjct: 134 DNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAA 193 Query: 539 KAIETF--NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 A R + G + V+ A VE +S YV NL + + + Sbjct: 194 MARRKLLPGRIQLWGHPIAVDWAEPE---VEVDEDTMSSVKILYVRNLMLSTSEEMIEKE 250 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 F+ N + R + FV +++ED A+ AL+G+ +DG P+ V +A Sbjct: 251 FN------NIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301 Score = 36.2 bits (82), Expect = 0.29 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 ++G LP + L+ + + G++ ++ D G +RG+ FVT ++K + +AI L+ Sbjct: 59 FIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKLEAKNAIKQLN 117 Query: 842 GQEM-DGRPLRV 874 E+ +GR L V Sbjct: 118 NYEIRNGRLLGV 129
>Q5RBD3:RBMS3_PONPY RNA-binding motif, single-stranded-interacting protein 3 - Pongo| pygmaeus (Orangutan) Length = 436 Score = 60.5 bits (145), Expect = 1e-08 Identities = 42/172 (24%), Positives = 71/172 (41%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 + E + +Y+ LP + L +L G + + I ++ + Q +G+GFV + Sbjct: 53 SGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPA 112 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 A KA+ + + AQ + E+ P Y+ NLP ++ L Sbjct: 113 AAQKAVASLKANGVQ---------AQMAKQQEQDPTNL------YISNLPISMDEQELEN 157 Query: 710 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 M G V++ I+ D G SRG GF M S E + I +G+ + P Sbjct: 158 MLKPFGHVISTRILRD-ANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 208
>Q8BWL5:RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 - Mus| musculus (Mouse) Length = 431 Score = 60.5 bits (145), Expect = 1e-08 Identities = 42/172 (24%), Positives = 71/172 (41%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 + E + +Y+ LP + L +L G + + I ++ + Q +G+GFV + Sbjct: 49 SGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPA 108 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 A KA+ + + AQ + E+ P Y+ NLP ++ L Sbjct: 109 AAQKAVASLKANGVQ---------AQMAKQQEQDPTNL------YISNLPISMDEQELEN 153 Query: 710 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 M G V++ I+ D G SRG GF M S E + I +G+ + P Sbjct: 154 MLKPFGHVISTRILRD-ANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 204
>Q6XE24:RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 - Homo| sapiens (Human) Length = 437 Score = 60.5 bits (145), Expect = 1e-08 Identities = 42/172 (24%), Positives = 71/172 (41%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 + E + +Y+ LP + L +L G + + I ++ + Q +G+GFV + Sbjct: 54 SGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPA 113 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQ 709 A KA+ + + AQ + E+ P Y+ NLP ++ L Sbjct: 114 AAQKAVASLKANGVQ---------AQMAKQQEQDPTNL------YISNLPISMDEQELEN 158 Query: 710 MFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 M G V++ I+ D G SRG GF M S E + I +G+ + P Sbjct: 159 MLKPFGHVISTRILRD-ANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 209
>Q6GQD3:RB24A_XENLA RNA-binding protein 24-A - Xenopus laevis (African clawed frog)| Length = 225 Score = 60.5 bits (145), Expect = 1e-08 Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 5/139 (3%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ DS L + F G++ A ++ DR+TG+SRG+GFVTMA + + A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 836 LDGQEMDGRPLRVNVA--AERP---QRGF*CGAAAESMAWRFSWTHGNTAEMLLQKTEAC 1000 +DGR VN+A +P Q GF G A G A + + Sbjct: 72 -PNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQIHPA-LIQRPFGIPAHYVYPQAYVQ 129 Query: 1001 HHLKLPH*PPDAGSPPIPY 1057 + +PH P A + PY Sbjct: 130 PGVVIPHVQPTAATSTSPY 148 Score = 59.7 bits (143), Expect = 2e-08 Identities = 33/76 (43%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ A++A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q5REG1:SART3_PONPY Squamous cell carcinoma antigen recognized by T-cells 3 - Pongo| pygmaeus (Orangutan) Length = 981 Score = 60.1 bits (144), Expect = 2e-08 Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Frame = +2 Query: 377 VYVGNLPYDVDSE--RLAQLFDQAG-VVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 V+V NLPY + +L LF+ G VV++ + NR G RG+ +V + A +A+ Sbjct: 724 VFVSNLPYSMQEPDAKLRPLFEACGEVVQIRPIFSNR--GDFRGYRYVEFKEEKSALQAL 781 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF---RAYVGNLPWQAEDSRLVQMFS 718 E +R + GR + V+ + + ++++S + ++ LP+ L ++ Sbjct: 782 E-MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICK 840 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 898 HG V + +V +R G+ +G +V ++ A+ +DG + ++V + + PQ Sbjct: 841 AHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMDGMTIKENVIKVAI-SNPPQ 898 Query: 899 R 901 R Sbjct: 899 R 899
>Q6P8A7:RBM24_XENTR RNA-binding protein 24 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 226 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ DS L + F G++ A ++ DR+TG+SRG+GFVTMA + + A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 72 -PNPIIDGRKANVNLA 86 Score = 59.7 bits (143), Expect = 2e-08 Identities = 33/76 (43%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ A++A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q9BX46:RBM24_HUMAN RNA-binding protein 24 - Homo sapiens (Human)| Length = 236 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ D+ L + F GE+ A ++ DR+TG+SRG+GFVTMA + + A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 72 -PNPIIDGRKANVNLA 86 Score = 59.7 bits (143), Expect = 2e-08 Identities = 33/76 (43%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ A++A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q5ZMA3:RBM24_CHICK RNA-binding protein 24 - Gallus gallus (Chicken)| Length = 225 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ DS L + F G++ A ++ DR+TG+SRG+GFVTMA + + A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 72 -PNPIIDGRKANVNLA 86 Score = 59.7 bits (143), Expect = 2e-08 Identities = 33/76 (43%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ A++A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q9I8B3:RB24B_XENLA RNA-binding protein 24-B - Xenopus laevis (African clawed frog)| Length = 224 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ DS L + F G++ A ++ DR+TG+SRG+GFVTMA + + A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 72 -PNPIIDGRKANVNLA 86 Score = 59.7 bits (143), Expect = 2e-08 Identities = 33/76 (43%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ A++A + Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86
>Q9JJ43:A2BP1_MOUSE Ataxin-2-binding protein 1 - Mus musculus (Mouse)| Length = 396 Score = 60.1 bits (144), Expect = 2e-08 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 4/126 (3%) Frame = +2 Query: 527 EEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF----RAYVGNLPWQAED 694 + AD + +T +SG + AA + + P + S R +V N+P++ D Sbjct: 75 QSADTSAQT-----VSGTATQTDDAAPTDGQPQTQPSENTESKSQPKRLHVSNIPFRFRD 129 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 L QMF + G++++ I+++ E G S+GFGFVT + D D A L G ++GR + V Sbjct: 130 PDLRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHGTVVEGRKIEV 187 Query: 875 NVAAER 892 N A R Sbjct: 188 NNATAR 193 Score = 54.3 bits (129), Expect = 1e-06 Identities = 29/87 (33%), Positives = 45/87 (51%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T + +++V N+P+ L Q+F Q G + E+I+N S+GFGFVT Sbjct: 109 TESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSA 166 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQR 610 +AD+A E + + GR + VN A R Sbjct: 167 DADRAREKLHGTVVEGRKIEVNNATAR 193
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 59.7 bits (143), Expect = 2e-08 Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 1/166 (0%) Frame = +2 Query: 335 GDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 GD ++ E+A K++VG L +D + L F + G V + + +G+SRGFGF+ Sbjct: 62 GDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFI 121 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAE 691 +K ++ + + GR+++ +A +++ P + + +VG L +A Sbjct: 122 LFKDSSSVEKVLDQ-KEHRLDGRVIDPKKA----MAMKKDPVK-----KIFVGGLNPEAT 171 Query: 692 DSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 + ++ + F + GE+ + D + + RGF F+T ++ + + Sbjct: 172 EEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 217 Score = 53.1 bits (126), Expect = 2e-06 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L W L F++ GEVV+ TI D TGRSRGFGF+ +D S Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF---KDSSSVEKV 132 Query: 836 LDGQE--MDGR 862 LD +E +DGR Sbjct: 133 LDQKEHRLDGR 143 Score = 37.4 bits (85), Expect = 0.13 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 K++VG L + E++ + F Q G +E E+ + + + RGF F+T + K +E Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
>Q8VC70:RBMS2_MOUSE RNA-binding motif, single-stranded-interacting protein 2 - Mus| musculus (Mouse) Length = 383 Score = 59.7 bits (143), Expect = 2e-08 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 2/181 (1%) Frame = +2 Query: 329 SGGDAGYTAEPPEEAK--VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGF 502 SGG G + + +K +Y+ L + L +L G + + I ++ + + +G+ Sbjct: 42 SGGGGGGSGGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGY 101 Query: 503 GFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPW 682 GFV + A KA+ + AQ + E+ P Y+ NLP Sbjct: 102 GFVDFDSPSSAQKAVTALKASGVQ---------AQMAKQQEQDPTNL------YISNLPL 146 Query: 683 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 ++ L M G+V++ I+ D +G SRG GF M S E ++ I+ +G+ + Sbjct: 147 SMDEQELEGMLKPFGQVISTRILRD-TSGASRGVGFARMESTEKCEAIITHFNGKYIKTP 205 Query: 863 P 865 P Sbjct: 206 P 206
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 59.7 bits (143), Expect = 2e-08 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 14/186 (7%) Frame = +2 Query: 329 SGGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRES-------- 484 SG G + V LP + + + LF G +E ++I ++ Sbjct: 135 SGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNP 194 Query: 485 -----GQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFAS 649 GQS G+GFV ++A++A+ N + + + V+ A RP Sbjct: 195 QAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA--------RPSSDAIK 246 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDR-ETGRSRGFGFVTMASKEDLDSA 826 YV LP L +F+ G ++ + I+ + +++G GF+ +E+ A Sbjct: 247 GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRA 306 Query: 827 ISALDG 844 I AL+G Sbjct: 307 IIALNG 312 Score = 50.8 bits (120), Expect = 1e-05 Identities = 26/76 (34%), Positives = 45/76 (59%) Frame = +2 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++ ++ NL + E++ L Q+F G V + IV D T + +G+GFV+M + ++ AI Sbjct: 401 AYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAI 460 Query: 830 SALDGQEMDGRPLRVN 877 AL+G M R L+V+ Sbjct: 461 RALNGYTMGNRVLQVS 476 Score = 50.4 bits (119), Expect = 1e-05 Identities = 23/73 (31%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL + + L QLF G V+ +++ + + Q +G+GFV+M+ +EA AI Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 464 NGYTMGNRVLQVS 476
>Q9JLI8:SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 - Mus| musculus (Mouse) Length = 962 Score = 59.3 bits (142), Expect = 3e-08 Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 6/185 (3%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSE--RLAQLFDQAG-VVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 + V+V NLPY ++ +L LF+ G VV++ + NR G RG+ +V + A Sbjct: 702 DSVTVFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSNR--GDFRGYCYVEFGEEKSA 759 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF---RAYVGNLPWQAEDSRLV 706 +A+E +R + GR + V+ + + +++++ + ++ LP+ L Sbjct: 760 QQALE-LDRKIVEGRPMFVSPCVDKSKNPDFKVFRYSTTLEKHKLFISGLPFSCTKEELE 818 Query: 707 QMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAA 886 + HG V + +V +R G+ +G +V ++ A+ +DG + ++V + + Sbjct: 819 DICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMDGMTIRENVIKVAI-S 876 Query: 887 ERPQR 901 PQR Sbjct: 877 NPPQR 881
>Q15020:SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 - Homo| sapiens (Human) Length = 963 Score = 59.3 bits (142), Expect = 3e-08 Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 6/181 (3%) Frame = +2 Query: 377 VYVGNLPYDVDSE--RLAQLFDQAG-VVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 V+V NLPY + +L LF+ G VV++ + NR G RG+ +V + A +A+ Sbjct: 706 VFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFSNR--GDFRGYCYVEFKEEKSALQAL 763 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF---RAYVGNLPWQAEDSRLVQMFS 718 E +R + GR + V+ + + ++++S + ++ LP+ L ++ Sbjct: 764 E-MDRKSVEGRPMFVSPCVDKSKNPDFKVFRYSTSLEKHKLFISGLPFSCTKEELEEICK 822 Query: 719 EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAERPQ 898 HG V + +V +R G+ +G +V ++ A+ +DG + ++V + + PQ Sbjct: 823 AHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAI-SNPPQ 880 Query: 899 R 901 R Sbjct: 881 R 881
>Q9H0Z9:RBM38_HUMAN RNA-binding protein 38 - Homo sapiens (Human)| Length = 216 Score = 59.3 bits (142), Expect = 3e-08 Identities = 33/76 (43%), Positives = 47/76 (61%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K++VG LPY L + F+ G +E A VI +R++G+SRG+GFVTM+ A++A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 554 FNRYDISGRLLNVNRA 601 N I GR NVN A Sbjct: 72 PNPI-IDGRKANVNLA 86 Score = 58.9 bits (141), Expect = 4e-08 Identities = 29/76 (38%), Positives = 45/76 (59%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG LP+ D+ L + F G++ A ++ DR+TG+SRG+GFVTMA + + A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 836 LDGQEMDGRPLRVNVA 883 +DGR VN+A Sbjct: 72 -PNPIIDGRKANVNLA 86
>O13759:CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 -| Schizosaccharomyces pombe (Fission yeast) Length = 632 Score = 59.3 bits (142), Expect = 3e-08 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSR--GFGFVTMSTIEEADKAIE 550 +++G+L +D+ + QL+ +V+ ++ S + FV S+ A++A+ Sbjct: 87 LWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALM 146 Query: 551 TFNRYDISGR--LLNVNRAA----QRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 +N I G +N A Q + V R P F +VG+L EDS L Sbjct: 147 KYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPE-----FSIFVGDLLPTTEDSDLFMT 201 Query: 713 F-SEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAE 889 F S + +A I+ D TG SR +GFV +S+++ A+ + G GRPLR++VA+ Sbjct: 202 FRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASP 261 Query: 890 R 892 + Sbjct: 262 K 262
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 59.3 bits (142), Expect = 3e-08 Identities = 43/157 (27%), Positives = 75/157 (47%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G +P +++ + L +F+Q G + VI ++ +G +G F+T E A KA Sbjct: 8 KLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALKAQNA 67 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + L +NR Q V+ + + +VG L Q D+ + +MF G + Sbjct: 68 LHE---QKTLPGMNRPIQ----VKPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFGSI 120 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDG 844 T++ + G S+G FV S + +AISAL G Sbjct: 121 EECTVLRGPD-GASKGCAFVKYQSNAEAQAAISALHG 156 Score = 52.0 bits (123), Expect = 5e-06 Identities = 26/79 (32%), Positives = 49/79 (62%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 ++ +LP + DS ++QMF G V++A + DR T +S+ FGFV+ + +AI A++ Sbjct: 370 FIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMN 429 Query: 842 GQEMDGRPLRVNVAAERPQ 898 G ++ + L+V + +RP+ Sbjct: 430 GFQIGMKRLKVQL--KRPK 446 Score = 46.6 bits (109), Expect = 2e-04 Identities = 25/79 (31%), Positives = 40/79 (50%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E PE +++ +LP + + Q+F G V A+V +R + QS+ FGFV+ A Sbjct: 362 EGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASA 421 Query: 536 DKAIETFNRYDISGRLLNV 592 AI+ N + I + L V Sbjct: 422 QAAIQAMNGFQIGMKRLKV 440
>Q56JZ7:ZCRB1_BOVIN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Bos taurus (Bovine) Length = 217 Score = 58.9 bits (141), Expect = 4e-08 Identities = 25/81 (30%), Positives = 50/81 (61%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S YV NLP+ ++ L ++FS++G+VV TI+ D++T RS+G F+ K+ + Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQNC 67 Query: 827 ISALDGQEMDGRPLRVNVAAE 889 A++ +++ GR ++ ++A + Sbjct: 68 TRAINNKQLFGRVIKASIAID 88 Score = 46.2 bits (108), Expect = 3e-04 Identities = 21/88 (23%), Positives = 43/88 (48%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P ++ VYV NLP+ + + L ++F + G V ++ ++++ +S+G F+ + A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRRSKGVAFILFLDKDSAQN 66 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVE 625 N + GR++ + A G E Sbjct: 67 CTRAINNKQLFGRVIKASIAIDNGRAAE 94
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 58.9 bits (141), Expect = 4e-08 Identities = 25/78 (32%), Positives = 46/78 (58%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L + + L +F ++G +V ++ DRET +SRGF FVT+ S D A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 836 LDGQEMDGRPLRVNVAAE 889 ++G+ +DG+ ++V A + Sbjct: 69 MNGKSLDGKAIKVEQATK 86 Score = 46.2 bits (108), Expect = 3e-04 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E K+++G L + + + L +F + G + ++ +RE+ +SRGF FVT+ + +A Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADA 62 Query: 536 DKAIETFNRYDISGRLLNVNRAA----QRGSRVERPP 634 A N + G+ + V +A + G R PP Sbjct: 63 KDAARDMNGKSLDGKAIKVEQATKPFFESGRRGPPPP 99
>Q10572:FOX1_CAEEL Sex determination protein fox-1 - Caenorhabditis elegans| Length = 415 Score = 58.9 bits (141), Expect = 4e-08 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 1/184 (0%) Frame = +2 Query: 338 DAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTM 517 D ++ P +++V N+P+ L +F++ GVV E+I+N S+GFGFVTM Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTM 199 Query: 518 STIEEADKAIETFNRYDISGRLLNVNRAAQR-GSRVERPPRQFASSFRAYVGNLPWQAED 694 ++A++A + + I GR + VN A R S+ +P P A+ Sbjct: 200 ERPQDAERARQELHGSMIEGRKIEVNCATARVHSKKVKPTGGILDQMN------PLMAQS 253 Query: 695 SRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRV 874 + Q ++ + +V GR L +A++ ++ G+PL Sbjct: 254 ALAAQAQMNRALLLRSPLVAQSLLGRGAALIPGMQQPAFQLQAALAGNPLAQLQGQPLLF 313 Query: 875 NVAA 886 N AA Sbjct: 314 NAAA 317 Score = 55.1 bits (131), Expect = 6e-07 Identities = 31/79 (39%), Positives = 46/79 (58%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 R +V N+P++ D L MF + G V + I+++ E G S+GFGFVTM +D + A Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN-ERG-SKGFGFVTMERPQDAERARQE 211 Query: 836 LDGQEMDGRPLRVNVAAER 892 L G ++GR + VN A R Sbjct: 212 LHGSMIEGRKIEVNCATAR 230
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 58.9 bits (141), Expect = 4e-08 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G +P ++D + L LF++ G + V+ +R +G +G F+T E A KA Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 554 FNRYDISGRLLNVNRAAQ--------RG--SRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 + L +NR Q RG S + +PP Q + +VG L Q + + Sbjct: 115 LHE---QKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQ---DRKLFVGMLNKQQSEDDV 168 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE 850 ++F G + TI+ + G S+G FV +S + +AI+AL G + Sbjct: 169 RRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAAINALHGSQ 216 Score = 48.5 bits (114), Expect = 6e-05 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 6/142 (4%) Frame = +2 Query: 506 FVTMSTIE--EADKAIETFNRYDIS-GRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 ++ M+T+ +AD A + N S G ++N + P + + + ++G + Sbjct: 2 YIKMATLANGQADNASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQI 61 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM- 853 P ++ L +F E G++ T++ DR TG +G F+T +E A SAL Q+ Sbjct: 62 PRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTL 121 Query: 854 --DGRPLRVNVAAERPQRGF*C 913 RP++V A + G C Sbjct: 122 PGMNRPIQVKPADSESRGGSSC 143 Score = 35.8 bits (81), Expect = 0.37 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 GG + P ++ K++VG L + + +LF+ G +E ++ + G S+G FV Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFV 197 Query: 512 TMSTIEEADKAIETFN 559 S+ EA AI + Sbjct: 198 KYSSHAEAQAAINALH 213
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 58.9 bits (141), Expect = 4e-08 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G +P ++D + L LF++ G + V+ +R +G +G F+T E A KA Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 554 FNRYDISGRLLNVNRAAQ--------RG--SRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 + L +NR Q RG S + +PP Q + +VG L Q + + Sbjct: 115 LHE---QKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQ---DRKLFVGMLNKQQSEDDV 168 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE 850 ++F G + TI+ + G S+G FV +S + +AI+AL G + Sbjct: 169 RRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAAINALHGSQ 216 Score = 48.5 bits (114), Expect = 6e-05 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 6/142 (4%) Frame = +2 Query: 506 FVTMSTIE--EADKAIETFNRYDIS-GRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 ++ M+T+ +AD A + N S G ++N + P + + + ++G + Sbjct: 2 YIKMATLANGQADNASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQI 61 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM- 853 P ++ L +F E G++ T++ DR TG +G F+T +E A SAL Q+ Sbjct: 62 PRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTL 121 Query: 854 --DGRPLRVNVAAERPQRGF*C 913 RP++V A + G C Sbjct: 122 PGMNRPIQVKPADSESRGGSSC 143 Score = 35.8 bits (81), Expect = 0.37 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 GG + P ++ K++VG L + + +LF+ G +E ++ + G S+G FV Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFV 197 Query: 512 TMSTIEEADKAIETFN 559 S+ EA AI + Sbjct: 198 KYSSHAEAQAAINALH 213
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 58.9 bits (141), Expect = 4e-08 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G +P ++D + L LF++ G + V+ +R +G +G F+T E A KA Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 554 FNRYDISGRLLNVNRAAQ--------RG--SRVERPPRQFASSFRAYVGNLPWQAEDSRL 703 + L +NR Q RG S + +PP Q + +VG L Q + + Sbjct: 115 LHE---QKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQ---DRKLFVGMLNKQQSEDDV 168 Query: 704 VQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE 850 ++F G + TI+ + G S+G FV +S + +AI+AL G + Sbjct: 169 RRLFEAFGNIEECTILRGPD-GNSKGCAFVKYSSHAEAQAAINALHGSQ 216 Score = 48.5 bits (114), Expect = 6e-05 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 6/142 (4%) Frame = +2 Query: 506 FVTMSTIE--EADKAIETFNRYDIS-GRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 ++ M+T+ +AD A + N S G ++N + P + + + ++G + Sbjct: 2 YIKMATLANGQADNASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQI 61 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM- 853 P ++ L +F E G++ T++ DR TG +G F+T +E A SAL Q+ Sbjct: 62 PRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTL 121 Query: 854 --DGRPLRVNVAAERPQRGF*C 913 RP++V A + G C Sbjct: 122 PGMNRPIQVKPADSESRGGSSC 143 Score = 35.8 bits (81), Expect = 0.37 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFV 511 GG + P ++ K++VG L + + +LF+ G +E ++ + G S+G FV Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPD-GNSKGCAFV 197 Query: 512 TMSTIEEADKAIETFN 559 S+ EA AI + Sbjct: 198 KYSSHAEAQAAINALH 213
>Q5YD48:ACF_MOUSE APOBEC1 complementation factor - Mus musculus (Mouse)| Length = 595 Score = 58.9 bits (141), Expect = 4e-08 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 4/162 (2%) Frame = +2 Query: 332 GGDAGYTAEPPEEA-KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGF 508 G G+ + PPE ++++G LP D+ + L L ++ G + ++ + +G +RG+ F Sbjct: 42 GPPPGWDSTPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDF-NGNNRGYAF 100 Query: 509 VTMSTIEEADKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQ 685 VT S +EA AI+ N Y+I +GRLL V + + R + G +P Sbjct: 101 VTFSNKQEAKNAIKQLNNYEIRTGRLLGVCAS--------------VDNCRLFRGGIPKT 146 Query: 686 AEDSRLVQMFSEHGEVVNATIVYD--RETGRSRGFGFVTMAS 805 + ++ + E V IVY + ++RGF FV S Sbjct: 147 KKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYES 188 Score = 38.5 bits (88), Expect = 0.058 Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 6/179 (3%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQA--GVVEVAEVIYNRESGQSRGFGFVTMSTIEEAD 538 + +++ G +P E + + GVV+V + ++RGF FV + A Sbjct: 134 DNCRLFRGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRGFAFVEYESHRAAA 193 Query: 539 KAIETF--NRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 A R + G + V+ A VE +S YV NL + + + Sbjct: 194 MARRRLLPGRIQLWGHPIAVDWAEPE---VEVDEDTMSSVKILYVRNLMLSTSEEMIEKE 250 Query: 713 FS--EHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA 883 F+ + G V + R + FV +++ED A+ AL+G+ +DG P+ V +A Sbjct: 251 FNSIKPGAV--------ERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301 Score = 37.7 bits (86), Expect = 0.099 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 ++G LP + L+ + + G++ ++ D G +RG+ FVT ++K++ +AI L+ Sbjct: 59 FIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDFN-GNNRGYAFVTFSNKQEAKNAIKQLN 117 Query: 842 GQEM-DGRPLRV 874 E+ GR L V Sbjct: 118 NYEIRTGRLLGV 129
>Q9NWB1:A2BP1_HUMAN Ataxin-2-binding protein 1 - Homo sapiens (Human)| Length = 397 Score = 58.9 bits (141), Expect = 4e-08 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 4/131 (3%) Frame = +2 Query: 512 TMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSF----RAYVGNLP 679 T S AD + +T +SG + AA + + P + + R +V N+P Sbjct: 71 THSEQSPADTSAQT-----VSGTATQADDAAPTDGQPQTQPSENTENKSQPKRLHVSNIP 125 Query: 680 WQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDG 859 ++ D L QMF + G++++ I+++ E G S+GFGFVT + D D A L G ++G Sbjct: 126 FRFRDPDLRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREKLHGTVVEG 183 Query: 860 RPLRVNVAAER 892 R + VN A R Sbjct: 184 RKIEVNNATAR 194 Score = 54.3 bits (129), Expect = 1e-06 Identities = 29/87 (33%), Positives = 45/87 (51%) Frame = +2 Query: 350 TAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIE 529 T + +++V N+P+ L Q+F Q G + E+I+N S+GFGFVT Sbjct: 110 TENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSA 167 Query: 530 EADKAIETFNRYDISGRLLNVNRAAQR 610 +AD+A E + + GR + VN A R Sbjct: 168 DADRAREKLHGTVVEGRKIEVNNATAR 194
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 58.5 bits (140), Expect = 5e-08 Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 4/117 (3%) Frame = +2 Query: 593 NRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGR 772 NR GSR P F L + L ++FS +G + +VYD+ TGR Sbjct: 102 NRRRHTGSRANPDPNTCLGVF-----GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGR 156 Query: 773 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA----AERPQRGF*CGAAAES 931 SRGF FV +D A+ +G E+DGR +RV+ + A P G G S Sbjct: 157 SRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHS 213 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/96 (26%), Positives = 47/96 (48%) Frame = +2 Query: 344 GYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMST 523 G A P + V L L ++F + G + V+Y++ +G+SRGF FV Sbjct: 108 GSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 167 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERP 631 I+++ +A+E N ++ GR + V+ + + + P Sbjct: 168 IDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP 203
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 58.5 bits (140), Expect = 5e-08 Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 4/117 (3%) Frame = +2 Query: 593 NRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGR 772 NR GSR P F L + L ++FS +G + +VYD+ TGR Sbjct: 104 NRRRHTGSRANPDPNTCLGVF-----GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGR 158 Query: 773 SRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVA----AERPQRGF*CGAAAES 931 SRGF FV +D A+ +G E+DGR +RV+ + A P G G S Sbjct: 159 SRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHS 215 Score = 47.4 bits (111), Expect = 1e-04 Identities = 25/96 (26%), Positives = 47/96 (48%) Frame = +2 Query: 344 GYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMST 523 G A P + V L L ++F + G + V+Y++ +G+SRGF FV Sbjct: 110 GSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 169 Query: 524 IEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERP 631 I+++ +A+E N ++ GR + V+ + + + P Sbjct: 170 IDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP 205
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 58.5 bits (140), Expect = 5e-08 Identities = 25/78 (32%), Positives = 45/78 (57%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L + + L +F ++G +V ++ DRET +SRGF FVT S D A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 836 LDGQEMDGRPLRVNVAAE 889 ++G+ +DG+ ++V A + Sbjct: 69 MNGKSLDGKAIKVEQATK 86 Score = 45.8 bits (107), Expect = 4e-04 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E K+++G L + + + L +F + G + ++ +RE+ +SRGF FVT + +A Sbjct: 3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62 Query: 536 DKAIETFNRYDISGRLLNVNRAA----QRGSRVERPP 634 A N + G+ + V +A + G R PP Sbjct: 63 KDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPP 99
>Q6DJI9:ZCRB1_XENLA Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Xenopus laevis (African clawed frog) Length = 218 Score = 58.2 bits (139), Expect = 7e-08 Identities = 25/81 (30%), Positives = 50/81 (61%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S YV NLP+ ++ L ++FS++G+VV TI+ D+++ +S+G FV KE + Sbjct: 8 SKSTVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQNC 67 Query: 827 ISALDGQEMDGRPLRVNVAAE 889 + L+ +++ GR ++ ++A + Sbjct: 68 VRGLNNKQLFGRAIKASIAKD 88 Score = 49.3 bits (116), Expect = 3e-05 Identities = 24/88 (27%), Positives = 43/88 (48%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P ++ VYV NLP+ + + L ++F + G V ++ +++S +S+G FV E A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLHRIFSKYGKVVKVTILKDKDSRKSKGVSFVLFLDKESAQN 66 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVE 625 + N + GR + + A G E Sbjct: 67 CVRGLNNKQLFGRAIKASIAKDNGRATE 94
>O13845:RSD1_SCHPO RNA-binding protein rsd1 - Schizosaccharomyces pombe (Fission| yeast) Length = 604 Score = 58.2 bits (139), Expect = 7e-08 Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 11/184 (5%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E + V+V L + S L F+QAG V A+++ ++ SG+S+G +V + Sbjct: 235 EERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSV 294 Query: 536 DKAIETFNRYDISGRLLNV-----------NRAAQRGSRVERPPRQFASSFRAYVGNLPW 682 AI + RLL + NR A+ + + R R V N+ + Sbjct: 295 QAAIALSGK-----RLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPFHRLCVSNIHF 349 Query: 683 QAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGR 862 D + +F G++ + D + RS+GFG++ + +A+ ++G ++ GR Sbjct: 350 NLTDEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGR 408 Query: 863 PLRV 874 +RV Sbjct: 409 NMRV 412
>Q8R0F5:RBMX2_MOUSE RNA-binding motif protein, X-linked 2 - Mus musculus (Mouse)| Length = 326 Score = 58.2 bits (139), Expect = 7e-08 Identities = 25/80 (31%), Positives = 50/80 (62%) Frame = +2 Query: 638 QFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDL 817 ++ S +VG LP++ + ++ +FS++GE+VN +V D++TG+S+GF F+ + Sbjct: 31 EYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRST 90 Query: 818 DSAISALDGQEMDGRPLRVN 877 A+ +G ++ GR +RV+ Sbjct: 91 VLAVDNFNGIKIKGRTIRVD 110 Score = 47.0 bits (110), Expect = 2e-04 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 +E A ++VG LPY++ + +F Q G + ++ ++++G+S+GF F+ Sbjct: 30 SEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89 Query: 533 ADKAIETFNRYDISGRLLNVN-----RAAQRGSRVERPPRQ 640 A++ FN I GR + V+ RA Q V+ R+ Sbjct: 90 TVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRE 130
>Q3ZC34:RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 - Bos| taurus (Bovine) Length = 407 Score = 58.2 bits (139), Expect = 7e-08 Identities = 39/166 (23%), Positives = 71/166 (42%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +Y+ L + L +L G + + I ++ + + +G+GFV + A KA+ Sbjct: 55 KTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV 114 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + AQ + E+ P Y+ NLP ++ L M G Sbjct: 115 TALKASGVQ---------AQMAKQQEQDPTNL------YISNLPLSMDEQELEGMLKPFG 159 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 +V++ I+ D +G SRG GF M S E ++ I+ +G+ + P Sbjct: 160 QVISTRILRD-TSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPP 204
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 58.2 bits (139), Expect = 7e-08 Identities = 45/159 (28%), Positives = 74/159 (46%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + ++++VGNLP D+ E + +LF++ G + EV +++ +GFGF+ + T A+ A Sbjct: 77 QRSRLFVGNLPPDITEEEMRKLFEKYG--KAGEVFIHKD----KGFGFIRLETRTLAEIA 130 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + G+ L V A S R NLP + L + FS Sbjct: 131 KVELDNMPLRGKQLRVRFACHSASLTVR--------------NLPQYVSNELLEEAFSVF 176 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 G+V A ++ D + GR G G V + K +A ALD Sbjct: 177 GQVERAVVIVD-DRGRPSGKGIVEFSGK---PAARKALD 211 Score = 39.7 bits (91), Expect = 0.026 Identities = 23/83 (27%), Positives = 40/83 (48%) Frame = +2 Query: 635 RQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 814 + F R +VGNLP + + ++F ++G+ I D+ GFGF+ + ++ Sbjct: 73 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTL 126 Query: 815 LDSAISALDGQEMDGRPLRVNVA 883 + A LD + G+ LRV A Sbjct: 127 AEIAKVELDNMPLRGKQLRVRFA 149
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 58.2 bits (139), Expect = 7e-08 Identities = 45/159 (28%), Positives = 74/159 (46%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + ++++VGNLP D+ E + +LF++ G + EV +++ +GFGF+ + T A+ A Sbjct: 72 QRSRLFVGNLPPDITEEEMRKLFEKYG--KAGEVFIHKD----KGFGFIRLETRTLAEIA 125 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + G+ L V A S R NLP + L + FS Sbjct: 126 KVELDNMPLRGKQLRVRFACHSASLTVR--------------NLPQYVSNELLEEAFSVF 171 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 G+V A ++ D + GR G G V + K +A ALD Sbjct: 172 GQVERAVVIVD-DRGRPSGKGIVEFSGK---PAARKALD 206 Score = 39.7 bits (91), Expect = 0.026 Identities = 23/83 (27%), Positives = 40/83 (48%) Frame = +2 Query: 635 RQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 814 + F R +VGNLP + + ++F ++G+ I D+ GFGF+ + ++ Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTL 121 Query: 815 LDSAISALDGQEMDGRPLRVNVA 883 + A LD + G+ LRV A Sbjct: 122 AEIAKVELDNMPLRGKQLRVRFA 144
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 58.2 bits (139), Expect = 7e-08 Identities = 45/159 (28%), Positives = 74/159 (46%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + ++++VGNLP D+ E + +LF++ G + EV +++ +GFGF+ + T A+ A Sbjct: 74 QRSRLFVGNLPPDITEEEMRKLFEKYG--KAGEVFIHKD----KGFGFIRLETRTLAEIA 127 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + G+ L V A S R NLP + L + FS Sbjct: 128 KVELDNMPLRGKQLRVRFACHSASLTVR--------------NLPQYVSNELLEEAFSVF 173 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 G+V A ++ D + GR G G V + K +A ALD Sbjct: 174 GQVERAVVIVD-DRGRPSGKGIVEFSGK---PAARKALD 208 Score = 39.7 bits (91), Expect = 0.026 Identities = 23/83 (27%), Positives = 40/83 (48%) Frame = +2 Query: 635 RQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 814 + F R +VGNLP + + ++F ++G+ I D+ GFGF+ + ++ Sbjct: 70 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTL 123 Query: 815 LDSAISALDGQEMDGRPLRVNVA 883 + A LD + G+ LRV A Sbjct: 124 AEIAKVELDNMPLRGKQLRVRFA 146
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 58.2 bits (139), Expect = 7e-08 Identities = 45/159 (28%), Positives = 74/159 (46%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + ++++VGNLP D+ E + +LF++ G + EV +++ +GFGF+ + T A+ A Sbjct: 72 QRSRLFVGNLPPDITEEEMRKLFEKYG--KAGEVFIHKD----KGFGFIRLETRTLAEIA 125 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEH 724 + + G+ L V A S R NLP + L + FS Sbjct: 126 KVELDNMPLRGKQLRVRFACHSASLTVR--------------NLPQYVSNELLEEAFSVF 171 Query: 725 GEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 G+V A ++ D + GR G G V + K +A ALD Sbjct: 172 GQVERAVVIVD-DRGRPSGKGIVEFSGK---PAARKALD 206 Score = 39.7 bits (91), Expect = 0.026 Identities = 23/83 (27%), Positives = 40/83 (48%) Frame = +2 Query: 635 RQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 814 + F R +VGNLP + + ++F ++G+ I D+ GFGF+ + ++ Sbjct: 68 KTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTL 121 Query: 815 LDSAISALDGQEMDGRPLRVNVA 883 + A LD + G+ LRV A Sbjct: 122 AEIAKVELDNMPLRGKQLRVRFA 144
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 58.2 bits (139), Expect = 7e-08 Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 14/185 (7%) Frame = +2 Query: 332 GGDAGYTAEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRES--------- 484 G G + V LP + + + LF G +E ++I ++ Sbjct: 172 GAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQ 231 Query: 485 ----GQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASS 652 GQS G+GFV ++A++A+ N + + + V+ A RP Sbjct: 232 APSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFA--------RPSSDAIKG 283 Query: 653 FRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDR-ETGRSRGFGFVTMASKEDLDSAI 829 YV LP L +F+ G ++ + I+ + +++G GF+ +E+ AI Sbjct: 284 ANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAI 343 Query: 830 SALDG 844 AL+G Sbjct: 344 IALNG 348 Score = 50.8 bits (120), Expect = 1e-05 Identities = 26/76 (34%), Positives = 45/76 (59%) Frame = +2 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 ++ ++ NL + E++ L Q+F G V + IV D T + +G+GFV+M + ++ AI Sbjct: 437 AYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAI 496 Query: 830 SALDGQEMDGRPLRVN 877 AL+G M R L+V+ Sbjct: 497 RALNGYTMGNRVLQVS 512 Score = 50.4 bits (119), Expect = 1e-05 Identities = 23/73 (31%), Positives = 42/73 (57%) Frame = +2 Query: 377 VYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIETF 556 +++ NL + + L QLF G V+ +++ + + Q +G+GFV+M+ +EA AI Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 557 NRYDISGRLLNVN 595 N Y + R+L V+ Sbjct: 500 NGYTMGNRVLQVS 512
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 58.2 bits (139), Expect = 7e-08 Identities = 42/159 (26%), Positives = 76/159 (47%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 K+++G +P ++D + L LF++ G + V+ +R +G +G F+T E A KA Sbjct: 55 KLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 114 Query: 554 FNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEV 733 + L +NR Q V+ + + +VG L Q + + ++F G + Sbjct: 115 LHE---QKTLPGMNRPIQ----VKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNI 167 Query: 734 VNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQE 850 TI+ + G S+G FV +S + +AI+AL G + Sbjct: 168 EECTILRGPD-GNSKGCAFVKYSSHAEAQAAINALHGSQ 205 Score = 46.6 bits (109), Expect = 2e-04 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%) Frame = +2 Query: 506 FVTMSTIE--EADKAIETFNRYDIS-GRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL 676 ++ M+T+ +AD A + N S G ++N + P + + + ++G + Sbjct: 2 YIKMATLANGQADNASLSTNGLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQI 61 Query: 677 PWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEM- 853 P ++ L +F E G++ T++ DR TG +G F+T +E A SAL Q+ Sbjct: 62 PRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTL 121 Query: 854 --DGRPLRVNVA 883 RP++V A Sbjct: 122 PGMNRPIQVKPA 133
>Q8TBF4:ZCRB1_HUMAN Zinc finger CCHC-type and RNA-binding motif-containing protein 1 -| Homo sapiens (Human) Length = 217 Score = 57.8 bits (138), Expect = 9e-08 Identities = 24/81 (29%), Positives = 50/81 (61%) Frame = +2 Query: 647 SSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSA 826 S YV NLP+ ++ L ++FS++G+VV TI+ D++T +S+G F+ K+ + Sbjct: 8 SKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNC 67 Query: 827 ISALDGQEMDGRPLRVNVAAE 889 A++ +++ GR ++ ++A + Sbjct: 68 TRAINNKQLFGRVIKASIAID 88 Score = 46.2 bits (108), Expect = 3e-04 Identities = 21/88 (23%), Positives = 43/88 (48%) Frame = +2 Query: 362 PEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADK 541 P ++ VYV NLP+ + + L ++F + G V ++ ++++ +S+G F+ + A Sbjct: 7 PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQN 66 Query: 542 AIETFNRYDISGRLLNVNRAAQRGSRVE 625 N + GR++ + A G E Sbjct: 67 CTRAINNKQLFGRVIKASIAIDNGRAAE 94
>Q99729:ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B - Homo sapiens (Human)| Length = 331 Score = 57.8 bits (138), Expect = 9e-08 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 1/156 (0%) Frame = +2 Query: 365 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKA 544 + K++VG L +D + L F + G V + + +G+SRGFGF+ +K Sbjct: 66 DAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 125 Query: 545 IETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNL-PWQAEDSRLVQMFSE 721 ++ + + GR+++ +A +++ P + + +VG L P + ++ + F E Sbjct: 126 LDQ-KEHRLDGRVIDPKKA----MAMKKDPVK-----KIFVGGLNPESPTEEKIREYFGE 175 Query: 722 HGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 GE+ + D + + RGF F+T +E + + Sbjct: 176 FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 211 Score = 52.8 bits (125), Expect = 3e-06 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + +VG L W L F++ GEVV+ TI D TGRSRGFGF+ +D S Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF---KDAASVEKV 125 Query: 836 LDGQE--MDGR 862 LD +E +DGR Sbjct: 126 LDQKEHRLDGR 136 Score = 35.0 bits (79), Expect = 0.64 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +2 Query: 374 KVYVGNL-PYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 K++VG L P E++ + F + G +E E+ + + + RGF F+T E K +E Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 212
>O43251:RBM9_HUMAN RNA-binding protein 9 - Homo sapiens (Human)| Length = 390 Score = 57.8 bits (138), Expect = 9e-08 Identities = 31/79 (39%), Positives = 48/79 (60%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 R +V N+P++ D L QMF + G++++ I+++ E G S+GFGFVT + D D A Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN-ERG-SKGFGFVTFENSADADRAREK 179 Query: 836 LDGQEMDGRPLRVNVAAER 892 L G ++GR + VN A R Sbjct: 180 LHGTVVEGRKIEVNNATAR 198 Score = 53.5 bits (127), Expect = 2e-06 Identities = 28/79 (35%), Positives = 43/79 (54%) Frame = +2 Query: 374 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 553 +++V N+P+ L Q+F Q G + E+I+N S+GFGFVT +AD+A E Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 179 Query: 554 FNRYDISGRLLNVNRAAQR 610 + + GR + VN A R Sbjct: 180 LHGTVVEGRKIEVNNATAR 198
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 57.8 bits (138), Expect = 9e-08 Identities = 25/78 (32%), Positives = 46/78 (58%) Frame = +2 Query: 656 RAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 + ++G L + ++ L F ++G +V ++ DRET +SRGF FVT S D +A Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68 Query: 836 LDGQEMDGRPLRVNVAAE 889 ++G+ +DG+ ++V A + Sbjct: 69 MNGKSLDGKAIKVAQATK 86 Score = 45.8 bits (107), Expect = 4e-04 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 E K+++G L + D + L F + G + ++ +RE+ +SRGF FVT + +A Sbjct: 3 EADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62 Query: 536 DKAIETFNRYDISGRLLNVNRAAQRGSRVER----PPR 637 A N + G+ + V +A + R PPR Sbjct: 63 KAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPR 100
>Q9Y388:RBMX2_HUMAN RNA-binding motif protein, X-linked 2 - Homo sapiens (Human)| Length = 322 Score = 57.4 bits (137), Expect = 1e-07 Identities = 24/80 (30%), Positives = 50/80 (62%) Frame = +2 Query: 638 QFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDL 817 ++ S ++G LP++ + ++ +FS++GE+VN +V D++TG+S+GF F+ + Sbjct: 31 EYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRST 90 Query: 818 DSAISALDGQEMDGRPLRVN 877 A+ +G ++ GR +RV+ Sbjct: 91 ILAVDNFNGIKIKGRTIRVD 110 Score = 45.8 bits (107), Expect = 4e-04 Identities = 21/84 (25%), Positives = 45/84 (53%) Frame = +2 Query: 353 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEE 532 +E + A +++G LPY++ + +F Q G + ++ ++++G+S+GF F+ Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89 Query: 533 ADKAIETFNRYDISGRLLNVNRAA 604 A++ FN I GR + V+ + Sbjct: 90 TILAVDNFNGIKIKGRTIRVDHVS 113
>Q15434:RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 - Homo| sapiens (Human) Length = 407 Score = 57.4 bits (137), Expect = 1e-07 Identities = 39/166 (23%), Positives = 71/166 (42%) Frame = +2 Query: 368 EAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAI 547 + +Y+ L + L +L G + + I ++ + + +G+GFV + A KA+ Sbjct: 55 KTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAV 114 Query: 548 ETFNRYDISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHG 727 + AQ + E+ P Y+ NLP ++ L M G Sbjct: 115 TALKASGVQ---------AQMAKQQEQDPTNL------YISNLPLSMDEQELEGMLKPFG 159 Query: 728 EVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRP 865 +V++ I+ D +G SRG GF M S E ++ I+ +G+ + P Sbjct: 160 QVISTRILRD-TSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPP 204
>Q4WJT7:MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 - Aspergillus| fumigatus (Sartorya fumigata) Length = 825 Score = 57.4 bits (137), Expect = 1e-07 Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 13/191 (6%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQ-----SRGFGFVTMS 520 EP + ++V NL + +ER ++F A + + + S GFGFV Sbjct: 592 EPVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFR 651 Query: 521 TIEEADKAIETFNRYDISGRLLNVNR------AAQRGSRVERPPRQFASSFRAYVGNLPW 682 T +A A+ + Y + L V AA+ R + + A + + NLP+ Sbjct: 652 TKAQAQAALAAMDGYKLDQHELVVRASNKAMDAAEERRREDTAKKIAARRTKIIIKNLPF 711 Query: 683 QAEDSRLVQMFSEHGEVVNATIV--YDRETGRSRGFGFVTMASKEDLDSAISALDGQEMD 856 QA + +F +G++ + + +DR +RGFGF S + ++A+ AL + Sbjct: 712 QATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAMDALKNTHLL 768 Query: 857 GRPLRVNVAAE 889 GR L + A E Sbjct: 769 GRRLVLEFANE 779 Score = 48.1 bits (113), Expect = 7e-05 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = +2 Query: 650 SFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAI 829 S R +V NLP+ A +S L +FS+ G++ + +D + S+GF +V + A Sbjct: 300 SSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAY 359 Query: 830 SALDGQEMDGRPLRV 874 LDG+ GR + + Sbjct: 360 KELDGKHFQGRLMHI 374 Score = 43.5 bits (101), Expect = 0.002 Identities = 21/74 (28%), Positives = 39/74 (52%) Frame = +2 Query: 371 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIE 550 ++++V NLPYD L +F + G +E V ++ S S+GF +V + A +A + Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYK 360 Query: 551 TFNRYDISGRLLNV 592 + GRL+++ Sbjct: 361 ELDGKHFQGRLMHI 374
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 57.4 bits (137), Expect = 1e-07 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 1/161 (0%) Frame = +2 Query: 356 EPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEA 535 +P +V+VG +P D+ + L LF++AG + ++ + SGQ+RG+ F+T E A Sbjct: 160 QPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAA 219 Query: 536 DKAIETFNRYDI-SGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQM 712 +A++ + Y+I G+ L V + ++ R +VG++P +++ Sbjct: 220 QEAVKLCDSYEIRPGKHLGVCIS--------------VANNRLFVGSIPKNKTKENILEE 265 Query: 713 FSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISA 835 FS+ E + I+Y + + + GF + ED SA A Sbjct: 266 FSKVTEGLVDVILYHQPDDKKKNRGFCFL-EYEDHKSAAQA 305 Score = 42.7 bits (99), Expect = 0.003 Identities = 18/64 (28%), Positives = 34/64 (53%) Frame = +2 Query: 662 YVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKEDLDSAISALD 841 +VG +P + LV +F + G + + ++ D +G++RG+ F+T KE A+ D Sbjct: 168 FVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCD 227 Query: 842 GQEM 853 E+ Sbjct: 228 SYEI 231 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 179,853,347 Number of extensions: 3708075 Number of successful extensions: 13151 Number of sequences better than 10.0: 620 Number of HSP's gapped: 12604 Number of HSP's successfully gapped: 1241 Length of query: 411 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 295 Effective length of database: 68,868,219 Effective search space: 20316124605 Effective search space used: 20316124605 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
