| Clone Name | FLbaf148h18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein Length = 1139 Score = 1661 bits (838), Expect = 0.0 Identities = 870/883 (98%) Strand = Plus / Plus Query: 246 acgccgctgaggcgggcctcgactgggccgacgcggaggaagctgaagagacggtgacgg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 acgccgctgaggcgggcctcgactgggccgacgcggaggaagctgaagagacggtgacgg 310 Query: 306 aggaggagcccgtggtggcggcctccggtggggacgcggggtacacagcggagccgcccg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 aggaggagcccgtggtggcggcctccggtggggacgcggggtacacagcggagccgcccg 370 Query: 366 aggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgccc 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 aggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgccc 430 Query: 426 agctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcag 485 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 431 agctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacaaagagtcag 490 Query: 486 gccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagcca 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 gccagagccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagcca 550 Query: 546 tcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagctc 605 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 551 tcgagacgtttaaccgctacaacatcagcggaaggcttctgaacgtaaacagggcagctc 610 Query: 606 aaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggcttatg 665 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 agaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggcttatg 670 Query: 666 ttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatg 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 ttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatg 730 Query: 726 gggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttg 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 gggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttg 790 Query: 786 gttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatggac 845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatggac 850 Query: 846 aggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagggt 905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 aggagatggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagggt 910 Query: 906 tctgatgcggcgcagcggcggagagcatggcttggcgtttctcgtggacacatgggaaca 965 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 tctgatgcggtgcagcggcggagagcatggcttggcgtttctcgtggacacatgggaaca 970 Query: 966 ctgctgaaatgttactgcagaagactgaagcatgtcaccacttgaaactcccgcattagc 1025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 ctgctgaaatgttactgcagaagactgaagcatgtcaccacttgaaactcccgcattagc 1030 Query: 1026 ctcctgatgctggctctcctcccatcccatannnnnnncatgctttcgttcgctgctggt 1085 |||| |||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1031 ctcccgatggtggctctcctcccatcccatatttttttcatgctttcgttcgctgctggt 1090 Query: 1086 gtaatcatgttaatttcttgtcaataccatgagttcaactttt 1128 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 gtaatcatgttaatttcttgtcaataccatgagttcaactttt 1133 Score = 289 bits (146), Expect = 1e-74 Identities = 160/167 (95%) Strand = Plus / Plus Query: 13 atcccttcccctgctcgcctgnnnnnnnttatccccttcagtcaccatggccacctccgc 72 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 18 atcccttcccctgctcgcctgcccccccttatccccttcagtcaccatggccacctccgc 77 Query: 73 catgacactcgccatgtctgcggcaacggaggcctcgctcttccaccccgcgttcgccgc 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 catgacactcgccatgtctgcggcaacggaggcctcgctcttccaccccgcgttcgccgc 137 Query: 133 ccaacacaagctcgccccggcgtccgcctccctcccactcattttct 179 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ccaacacaagctcgccccggcgtccgcctccctcccactcattttct 184
>ref|NM_001069016.1| Oryza sativa (japonica cultivar-group) Os08g0557100 (Os08g0557100) mRNA, complete cds Length = 1301 Score = 545 bits (275), Expect = e-151 Identities = 482/551 (87%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 424 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 483 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 484 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 543 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 544 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 603 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgta 592 || ||||| ||||| |||| | |||||||||| || |||| ||||||||||||||||||| Sbjct: 604 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgta 663 Query: 593 aacagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttct 652 |||||||| |||| ||||||||| ||||| ||||||||||| | |||||||| || || Sbjct: 664 aacagggcggctccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgct 723 Query: 653 ttcagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatg 712 ||||||||||||||||| |||||||||||||||| ||| ||||||||| || ||||| || Sbjct: 724 ttcagggcttatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattg 783 Query: 713 ttcagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgt 772 |||||||||||||| || || ||||| ||| || | || || || |||||| |||||||| Sbjct: 784 ttcagcgagcatggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgt 843 Query: 773 tcgcgaggatttggttttgtaactatggcttcaaaggaggatcttgacagtgctatttca 832 || || |||||||||||||| | ||||| || |||||||| || || ||||||||| Sbjct: 844 tctcggggatttggttttgtttccatggcctccaaggaggagctcgatgatgctatttct 903 Query: 833 gcgcttgatggacaggagatggatggccgcccactccgagtgaacgttgcagcagagaga 892 || |||||||||||||| |||||||||||||||| |||||||| || ||||| ||| || Sbjct: 904 gcccttgatggacaggaattggatggccgcccacttcgagtgaatgtggcagctgagcga 963 Query: 893 ccacagcgagg 903 ||||||||||| Sbjct: 964 ccacagcgagg 974
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 545 bits (275), Expect = e-151 Identities = 482/551 (87%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 428 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 487 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 488 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 547 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 548 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 607 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgta 592 || ||||| ||||| |||| | |||||||||| || |||| ||||||||||||||||||| Sbjct: 608 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgta 667 Query: 593 aacagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttct 652 |||||||| |||| ||||||||| ||||| ||||||||||| | |||||||| || || Sbjct: 668 aacagggcggctccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgct 727 Query: 653 ttcagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatg 712 ||||||||||||||||| |||||||||||||||| ||| ||||||||| || ||||| || Sbjct: 728 ttcagggcttatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattg 787 Query: 713 ttcagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgt 772 |||||||||||||| || || ||||| ||| || | || || || |||||| |||||||| Sbjct: 788 ttcagcgagcatggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgt 847 Query: 773 tcgcgaggatttggttttgtaactatggcttcaaaggaggatcttgacagtgctatttca 832 || || |||||||||||||| | ||||| || |||||||| || || ||||||||| Sbjct: 848 tctcggggatttggttttgtttccatggcctccaaggaggagctcgatgatgctatttct 907 Query: 833 gcgcttgatggacaggagatggatggccgcccactccgagtgaacgttgcagcagagaga 892 || |||||||||||||| |||||||||||||||| |||||||| || ||||| ||| || Sbjct: 908 gcccttgatggacaggaattggatggccgcccacttcgagtgaatgtggcagctgagcga 967 Query: 893 ccacagcgagg 903 ||||||||||| Sbjct: 968 ccacagcgagg 978
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 545 bits (275), Expect = e-151 Identities = 482/551 (87%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 425 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 484 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 485 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 544 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 545 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 604 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgta 592 || ||||| ||||| |||| | |||||||||| || |||| ||||||||||||||||||| Sbjct: 605 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgta 664 Query: 593 aacagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttct 652 |||||||| |||| ||||||||| ||||| ||||||||||| | |||||||| || || Sbjct: 665 aacagggcggctccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgct 724 Query: 653 ttcagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatg 712 ||||||||||||||||| |||||||||||||||| ||| ||||||||| || ||||| || Sbjct: 725 ttcagggcttatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattg 784 Query: 713 ttcagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgt 772 |||||||||||||| || || ||||| ||| || | || || || |||||| |||||||| Sbjct: 785 ttcagcgagcatggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgt 844 Query: 773 tcgcgaggatttggttttgtaactatggcttcaaaggaggatcttgacagtgctatttca 832 || || |||||||||||||| | ||||| || |||||||| || || ||||||||| Sbjct: 845 tctcggggatttggttttgtttccatggcctccaaggaggagctcgatgatgctatttct 904 Query: 833 gcgcttgatggacaggagatggatggccgcccactccgagtgaacgttgcagcagagaga 892 || |||||||||||||| |||||||||||||||| |||||||| || ||||| ||| || Sbjct: 905 gcccttgatggacaggaattggatggccgcccacttcgagtgaatgtggcagctgagcga 964 Query: 893 ccacagcgagg 903 ||||||||||| Sbjct: 965 ccacagcgagg 975
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 517 bits (261), Expect = e-143 Identities = 465/533 (87%) Strand = Plus / Plus Query: 371 gccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgcccagctc 430 ||||||||||||||||| ||||||||||| || |||||||||||| | |||||||||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 431 ttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggccag 490 ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 491 agccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcgag 550 |||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattgag 247 Query: 551 acgtttaaccgctacgacatcagcggaaggcttctgaacgtaaacagggcagctcaaagg 610 | | |||||||||| || |||| ||||||||||||||||||||||||||| |||| |||| Sbjct: 248 atgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggctccaagg 307 Query: 611 ggctcccgtgttgagagacctcctcgacagtttgcatcttctttcagggcttatgttggt 670 ||||| ||||| ||||||||||| | |||||||| || ||||||||||||||||||| Sbjct: 308 ggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggcttatgttggc 367 Query: 671 aacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatggggaa 730 |||||||||||||||| ||| ||||||||| || ||||| |||||||||||||||| || Sbjct: 368 aacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagcatggagag 427 Query: 731 gtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttggtttt 790 || ||||| ||| || | || || || |||||| |||||||||| || |||||||||||| Sbjct: 428 gtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatttggtttt 487 Query: 791 gtaactatggcttcaaaggaggatcttgacagtgctatttcagcgcttgatggacaggag 850 || | ||||| || |||||||| || || ||||||||| || |||||||||||||| Sbjct: 488 gtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatggacaggaa 547 Query: 851 atggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 903 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 548 ttggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 600
>gb|AY108263.1| Zea mays PCO100700 mRNA sequence Length = 891 Score = 383 bits (193), Expect = e-102 Identities = 469/561 (83%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| |||||||||||||| ||||| |||||||| || || || ||||||||||| Sbjct: 56 ggagccgccagaggaggccaaggtctacgttgggaaccttccctacgacgtcgacagcga 115 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 | | ||||| ||| |||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 116 gggactcgcgcagatcttcgaccaggccggcgtcgtcgaggtcgccgaggttatctacaa 175 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| | |||||||||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct: 176 cagagaaactggccagagccgtgggtttggttttgttaccatgagcactgttgaggaagc 235 Query: 535 tgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaa 594 |||||||||||| |||| ||| | |||||| || || ||||| ||||||||||| ||||| Sbjct: 236 tgacaaagccattgagatgttcagccgctatgatattagcgggaggcttctgaatgtaaa 295 Query: 595 cagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttcttt 654 ||||||| || |||||| | || | || ||||||| |||| |||||| | |||| Sbjct: 296 cagggcatcttctaggggcactcgcatggaaagacctcagagacaatttgcaccagcttt 355 Query: 655 cagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgtt 714 ||| ||||||||||| ||| |||||||||||| || ||||||||| ||||||| |||| Sbjct: 356 cagagcttatgttggcaacttgccatggcaagttgatgactctaggctggtgcagttgtt 415 Query: 715 cagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttc 774 |||||||||||| ||||| ||| |||||| | | || || ||||||||||||||||| || Sbjct: 416 cagcgagcatggagaagttgttgatgctaaggttgtctacgacagagaaactgggcgctc 475 Query: 775 gcgaggatttggttttgtaactatggcttcaaaggaggatcttgacagtgctatttcagc 834 |||||||| ||||||||| | |||| ||||||||||| || | ||||||||| || Sbjct: 476 acgaggattcggttttgtatcaatggtgtcaaaggaggaactcaatgatgctatttcggc 535 Query: 835 gcttgatggacaggagatggatggccgcccactccgagtgaacgttgcagcagagagacc 894 || ||||||||||| |||| |||||||| || |||||||| |||||||||||| | || Sbjct: 536 cctagatggacaggaattggacggccgccctcttcgagtgaatgttgcagcagagcggcc 595 Query: 895 acagcgagggttctgatgcgg 915 |||| | || || |||||||| Sbjct: 596 acagaggggcttttgatgcgg 616
>ref|NM_001070481.1| Oryza sativa (japonica cultivar-group) Os09g0565200 (Os09g0565200) mRNA, complete cds Length = 1288 Score = 260 bits (131), Expect = 1e-65 Identities = 368/447 (82%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 437 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 496 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||| Sbjct: 497 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaa 556 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| ||| | ||| ||||||||||||||||| |||||||| || ||||||| || Sbjct: 557 cagagaaacagatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggc 616 Query: 535 tgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaa 594 ||| || || | |||| ||| | |||||||| | || |||||||||| ||||| Sbjct: 617 tgagaaggctgtggagatgttccatcgctacgatgttgatgggaggcttctgactgtaaa 676 Query: 595 cagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttcttt 654 || |||||||| || ||| | || || || |||||||| || ||||||| ||||||| Sbjct: 677 caaggcagctcctagaggcgctcgggtggaaagacctccccgtcagtttgggccttcttt 736 Query: 655 cagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgtt 714 |||| |||||| || || || || ||||||| ||| |||||||||||||| || |||| Sbjct: 737 caggatttatgtgggcaatctcccttggcaagtggatgactctaggttggtacagctgtt 796 Query: 715 cagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttc 774 |||||||||||| ||||||| | || | | |||||||||||||||||||||||||| Sbjct: 797 cagcgagcatggcaaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttc 856 Query: 775 gcgaggatttggttttgtaactatggc 801 |||||||||||||||||||| ||||| Sbjct: 857 acgaggatttggttttgtaacaatggc 883
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 260 bits (131), Expect = 1e-65 Identities = 368/447 (82%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 437 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 496 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||| Sbjct: 497 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaa 556 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| ||| | ||| ||||||||||||||||| |||||||| || ||||||| || Sbjct: 557 cagagaaacagatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggc 616 Query: 535 tgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaa 594 ||| || || | |||| ||| | |||||||| | || |||||||||| ||||| Sbjct: 617 tgagaaggctgtggagatgttccatcgctacgatgttgatgggaggcttctgactgtaaa 676 Query: 595 cagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttcttt 654 || |||||||| || ||| | || || || |||||||| || ||||||| ||||||| Sbjct: 677 caaggcagctcctagaggcgctcgggtggaaagacctccccgtcagtttgggccttcttt 736 Query: 655 cagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgtt 714 |||| |||||| || || || || ||||||| ||| |||||||||||||| || |||| Sbjct: 737 caggatttatgtgggcaatctcccttggcaagtggatgactctaggttggtacagctgtt 796 Query: 715 cagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttc 774 |||||||||||| ||||||| | || | | |||||||||||||||||||||||||| Sbjct: 797 cagcgagcatggcaaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttc 856 Query: 775 gcgaggatttggttttgtaactatggc 801 |||||||||||||||||||| ||||| Sbjct: 857 acgaggatttggttttgtaacaatggc 883
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 260 bits (131), Expect = 1e-65 Identities = 368/447 (82%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 438 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 497 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||| Sbjct: 498 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaa 557 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| ||| | ||| ||||||||||||||||| |||||||| || ||||||| || Sbjct: 558 cagagaaacagatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggc 617 Query: 535 tgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaa 594 ||| || || | |||| ||| | |||||||| | || |||||||||| ||||| Sbjct: 618 tgagaaggctgtggagatgttccatcgctacgatgttgatgggaggcttctgactgtaaa 677 Query: 595 cagggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttcttt 654 || |||||||| || ||| | || || || |||||||| || ||||||| ||||||| Sbjct: 678 caaggcagctcctagaggcgctcgggtggaaagacctccccgtcagtttgggccttcttt 737 Query: 655 cagggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgtt 714 |||| |||||| || || || || ||||||| ||| |||||||||||||| || |||| Sbjct: 738 caggatttatgtgggcaatctcccttggcaagtggatgactctaggttggtacagctgtt 797 Query: 715 cagcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttc 774 |||||||||||| ||||||| | || | | |||||||||||||||||||||||||| Sbjct: 798 cagcgagcatggcaaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttc 857 Query: 775 gcgaggatttggttttgtaactatggc 801 |||||||||||||||||||| ||||| Sbjct: 858 acgaggatttggttttgtaacaatggc 884
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 258 bits (130), Expect = 4e-65 Identities = 367/446 (82%) Strand = Plus / Plus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 481 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 540 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaac 475 || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 541 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaac 600 Query: 476 agagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagct 535 ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||||||| ||| Sbjct: 601 agagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggct 660 Query: 536 gacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaac 595 || || || | |||| ||| | ||||| || ||| ||||||||||||| ||||| Sbjct: 661 gagaaggctgtggagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaat 720 Query: 596 agggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttc 655 | ||||||| || ||||| ||||| || |||||||| |||| | || ||||| || Sbjct: 721 aaagcagctcctagaggctctcgtgtggacagacctcccagacaatctgggccttctctc 780 Query: 656 agggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttc 715 || ||||||||| |||||||| ||||||| ||| || ||||| |||||| | ||||| Sbjct: 781 agaatttatgttggcaacctgccttggcaagtggatgattctagattggtggagttgttc 840 Query: 716 agcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcg 775 ||||||||||| |||||||| |||| | | || |||||| ||||||||||||||||| Sbjct: 841 agcgagcatggtaaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcg 900 Query: 776 cgaggatttggttttgtaactatggc 801 || |||||||||||||| |||||||| Sbjct: 901 cggggatttggttttgttactatggc 926
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) Length = 1251 Score = 250 bits (126), Expect = 1e-62 Identities = 366/446 (82%) Strand = Plus / Plus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 481 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 540 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaac 475 || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 541 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaac 600 Query: 476 agagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagct 535 ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||||||| ||| Sbjct: 601 agagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggct 660 Query: 536 gacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaac 595 || || || | |||| ||| | ||||| || ||| ||||||||||||| ||||| Sbjct: 661 gagaaggctgtggagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaat 720 Query: 596 agggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttc 655 | ||||||| || ||||| ||||| || |||||||| |||| | || ||||| || Sbjct: 721 aaagcagctcctagaggctctcgtgtggacagacctcccagacaatctgggccttctctc 780 Query: 656 agggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttc 715 || ||||||||| |||||||| ||||||| ||| || ||||| |||||| | ||||| Sbjct: 781 agaatttatgttggcaacctgccttggcaagtggatgattctagattggtggagttgttc 840 Query: 716 agcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcg 775 ||||||||||| |||||||| |||| | | || |||||| |||||||||||||||| Sbjct: 841 agcgagcatggtaaagtagttgatgccagagttgtctatgaccgagaaactgggcgttca 900 Query: 776 cgaggatttggttttgtaactatggc 801 || |||||||||||||| |||||||| Sbjct: 901 cggggatttggttttgttactatggc 926
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence Length = 1108 Score = 234 bits (118), Expect = 6e-58 Identities = 364/446 (81%) Strand = Plus / Minus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 737 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 678 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaac 475 || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 677 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaac 618 Query: 476 agagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagct 535 ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||||||| ||| Sbjct: 617 agagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggct 558 Query: 536 gacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgtaaac 595 || || || | |||| ||| | ||||| || ||| ||||||||||||| ||||| Sbjct: 557 gagaaggctgtggagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaat 498 Query: 596 agggcagctcaaaggggctcccgtgttgagagacctcctcgacagtttgcatcttctttc 655 | ||||||| || ||||| ||||| || |||||||| |||| | || ||||| || Sbjct: 497 aaagcagctcctagaggctctcgtgtggacagacctcccagacaatctgggccttctctc 438 Query: 656 agggcttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttc 715 || ||||||||| |||||||| ||||||| ||| || ||||| |||||| ||||| Sbjct: 437 agaatttatgttggcaacctgccttggcaagtggatgattctagattggtggggttgttc 378 Query: 716 agcgagcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcg 775 ||||||||||| |||||||| |||| | | || |||||| ||||||||||| |||| Sbjct: 377 agcgagcatggtaaagtagttgatgccagagttgtctatgacggagaaactgggggttca 318 Query: 776 cgaggatttggttttgtaactatggc 801 || |||||||||||||| |||||||| Sbjct: 317 cggggatttggttttgttactatggc 292
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 222 bits (112), Expect = 2e-54 Identities = 238/280 (85%) Strand = Plus / Minus Query: 569 atcagcggaaggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagaga 628 |||| ||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||| Sbjct: 27873827 atcaacggaaggcttctgaacgtaaacagggcggctccaaggggctctcgtgtggagaga 27873768 Query: 629 cctcctcgacagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcg 688 ||||| | |||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 27873767 cctccaaggcagtttgctcctgctttcagggcttatgttggcaacctgccatggcaagtg 27873708 Query: 689 gaagactctaggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatc 748 || ||||||||| || ||||| |||||||||||||||| || || ||||| ||| || | Sbjct: 27873707 gatgactctaggctgctgcaattgttcagcgagcatggagaggtggttaacgcttcggtt 27873648 Query: 749 gtgtatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggcttcaaag 808 || || || |||||| |||||||||| || |||||||||||||| | ||||| || ||| Sbjct: 27873647 gtctacgatagagaatctgggcgttctcggggatttggttttgtttccatggcctccaag 27873588 Query: 809 gaggatcttgacagtgctatttcagcgcttgatggacagg 848 ||||| || || ||||||||| || ||||||||||||| Sbjct: 27873587 gaggagctcgatgatgctatttctgcccttgatggacagg 27873548 Score = 161 bits (81), Expect = 7e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 27874512 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 27874453 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| | ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 27874452 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 27874400 Score = 125 bits (63), Expect = 4e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 |||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||| Sbjct: 27874265 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 27874206 Query: 522 ctattgaggaagctgacaaagccatcgagacgtttaaccgcta 564 | ||||||||||| ||||| ||||| |||| | |||||||||| Sbjct: 27874205 cgattgaggaagccgacaaggccattgagatgcttaaccgcta 27874163 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 852 tggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 903 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 27873403 tggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 27873352
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 222 bits (112), Expect = 2e-54 Identities = 238/280 (85%) Strand = Plus / Minus Query: 569 atcagcggaaggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagaga 628 |||| ||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||| Sbjct: 81905 atcaacggaaggcttctgaacgtaaacagggcggctccaaggggctctcgtgtggagaga 81846 Query: 629 cctcctcgacagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcg 688 ||||| | |||||||| || ||||||||||||||||||| |||||||||||||||| | Sbjct: 81845 cctccaaggcagtttgctcctgctttcagggcttatgttggcaacctgccatggcaagtg 81786 Query: 689 gaagactctaggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatc 748 || ||||||||| || ||||| |||||||||||||||| || || ||||| ||| || | Sbjct: 81785 gatgactctaggctgctgcaattgttcagcgagcatggagaggtggttaacgcttcggtt 81726 Query: 749 gtgtatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggcttcaaag 808 || || || |||||| |||||||||| || |||||||||||||| | ||||| || ||| Sbjct: 81725 gtctacgatagagaatctgggcgttctcggggatttggttttgtttccatggcctccaag 81666 Query: 809 gaggatcttgacagtgctatttcagcgcttgatggacagg 848 ||||| || || ||||||||| || ||||||||||||| Sbjct: 81665 gaggagctcgatgatgctatttctgcccttgatggacagg 81626 Score = 161 bits (81), Expect = 7e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 82590 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 82531 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| | ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 82530 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 82478 Score = 125 bits (63), Expect = 4e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 |||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||| Sbjct: 82343 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 82284 Query: 522 ctattgaggaagctgacaaagccatcgagacgtttaaccgcta 564 | ||||||||||| ||||| ||||| |||| | |||||||||| Sbjct: 82283 cgattgaggaagccgacaaggccattgagatgcttaaccgcta 82241 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 852 tggatggccgcccactccgagtgaacgttgcagcagagagaccacagcgagg 903 |||||||||||||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 81481 tggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgagg 81430
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 Score = 204 bits (103), Expect = 5e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| ||||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 490 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 549 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 550 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttacaa 609 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 | |||| | | ||||||||||||||| || ||||| ||||||||||| |||||||| || Sbjct: 610 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggaggc 669 Query: 535 tga 537 ||| Sbjct: 670 tga 672 Score = 79.8 bits (40), Expect = 2e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 662 tatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgag 721 ||||| || |||||||||||||||| ||| ||||||||||||||| | ||||||||||| Sbjct: 797 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagcgag 856 Query: 722 catggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgagga 781 ||||| |||| || |||| | | |||| || |||||||| |||||||| || ||||| Sbjct: 857 catggcaaagtggtcgatgccaaggtcgtctacgacagagacactgggcgctcacgaggc 916 Query: 782 tttggttt 789 || ||||| Sbjct: 917 ttcggttt 924
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds Length = 1161 Score = 204 bits (103), Expect = 5e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| ||||||||||||||||||||||| |||||||| || || || |||||||| Sbjct: 365 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtggacagcga 424 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||| ||||||||||| |||||||| |||||||||||| ||||||||||||| || Sbjct: 425 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttataa 484 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 ||| || ||| |||||||||||||||||| ||||| ||||||||||| |||||||| || Sbjct: 485 cagggaaacagaccagagccgtggatttgggtttgtcaccatgagtaccattgaggaggc 544 Query: 535 tga 537 ||| Sbjct: 545 tga 547 Score = 61.9 bits (31), Expect = 5e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 671 aacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgagcatggggaa 730 |||||||||||||||| ||| |||||||||||||| | ||||||||||||| || || Sbjct: 681 aacctgccatggcaagtggacgactctaggttggtagagctgttcagcgagcacggcaaa 740 Query: 731 gtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgaggatttggttt 789 || || |||| | | | || || |||||||| |||||||| || || ||||||||||| Sbjct: 741 gttgtcgatgccagggttgtctacgacagagacactgggcgctcacggggatttggttt 799
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 147 bits (74), Expect = 1e-31 Identities = 101/110 (91%) Strand = Plus / Plus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 694 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 753 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 || ||||| |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 754 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggt 803 Score = 113 bits (57), Expect = 2e-21 Identities = 120/141 (85%) Strand = Plus / Plus Query: 661 ttatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcga 720 ||||||||| |||||||| ||||||| ||| || ||||| |||||| | |||||||||| Sbjct: 2275 ttatgttggcaacctgccttggcaagtggatgattctagattggtggagttgttcagcga 2334 Query: 721 gcatggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgagg 780 |||||| |||||||| |||| | | || |||||| ||||||||||||||||||| || Sbjct: 2335 gcatggtaaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcgcgggg 2394 Query: 781 atttggttttgtaactatggc 801 |||||||||||| |||||||| Sbjct: 2395 atttggttttgttactatggc 2415
>gb|EF057185.1| Panicum virgatum microsatellite PVSSR036 sequence Length = 526 Score = 139 bits (70), Expect = 3e-29 Identities = 94/102 (92%) Strand = Plus / Minus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 271 gagccgcccgaggaggccaaggtctacgtcggcaacctgccctacgacgtcgacagcgag 212 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtc 457 || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 211 cgcctcgcgcagctcttcgagcaggccggtgtcgtcgaggtc 170
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 133 bits (67), Expect = 2e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 22205695 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 22205636 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| ||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 22205635 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 22205585 Score = 127 bits (64), Expect = 1e-25 Identities = 184/224 (82%) Strand = Plus / Minus Query: 578 aggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagagacctcctcga 637 |||||||||| ||||||| |||||||| || ||| | || || || |||||||| || Sbjct: 22204474 aggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccccgt 22204415 Query: 638 cagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcggaagactct 697 ||||||| ||||||||||| |||||| || || || || ||||||| ||| |||||| Sbjct: 22204414 cagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgactct 22204355 Query: 698 aggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatcgtgtatgac 757 |||||||| || |||||||||||||||| ||||||| | || | | ||||||||| Sbjct: 22204354 aggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtatgac 22204295 Query: 758 agagaaactgggcgttcgcgaggatttggttttgtaactatggc 801 ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 22204294 agagaaactgggcgttcacgaggatttggttttgtaacaatggc 22204251 Score = 93.7 bits (47), Expect = 1e-15 Identities = 95/111 (85%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 570766 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 570707 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| |||||||| |||||||| |||| || |||||||||||| ||||||| Sbjct: 570706 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggt 570656 Score = 56.0 bits (28), Expect = 3e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 22205108 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 22205049 Query: 522 ctattgaggaagctga 537 | ||||||| ||||| Sbjct: 22205048 ccgttgaggaggctga 22205033
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 133 bits (67), Expect = 2e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 25593 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 25534 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| ||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 25533 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 25483 Score = 127 bits (64), Expect = 1e-25 Identities = 184/224 (82%) Strand = Plus / Minus Query: 578 aggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagagacctcctcga 637 |||||||||| ||||||| |||||||| || ||| | || || || |||||||| || Sbjct: 24372 aggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccccgt 24313 Query: 638 cagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcggaagactct 697 ||||||| ||||||||||| |||||| || || || || ||||||| ||| |||||| Sbjct: 24312 cagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgactct 24253 Query: 698 aggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatcgtgtatgac 757 |||||||| || |||||||||||||||| ||||||| | || | | ||||||||| Sbjct: 24252 aggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtatgac 24193 Query: 758 agagaaactgggcgttcgcgaggatttggttttgtaactatggc 801 ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 24192 agagaaactgggcgttcacgaggatttggttttgtaacaatggc 24149 Score = 56.0 bits (28), Expect = 3e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 25006 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 24947 Query: 522 ctattgaggaagctga 537 | ||||||| ||||| Sbjct: 24946 ccgttgaggaggctga 24931
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 133 bits (67), Expect = 2e-27 Identities = 100/111 (90%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 127188 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 127129 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| ||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 127128 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 127078 Score = 127 bits (64), Expect = 1e-25 Identities = 184/224 (82%) Strand = Plus / Minus Query: 578 aggcttctgaacgtaaacagggcagctcaaaggggctcccgtgttgagagacctcctcga 637 |||||||||| ||||||| |||||||| || ||| | || || || |||||||| || Sbjct: 125967 aggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctccccgt 125908 Query: 638 cagtttgcatcttctttcagggcttatgttggtaacctgccatggcaagcggaagactct 697 ||||||| ||||||||||| |||||| || || || || ||||||| ||| |||||| Sbjct: 125907 cagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatgactct 125848 Query: 698 aggttggtgcaaatgttcagcgagcatggggaagtagttaatgctacgatcgtgtatgac 757 |||||||| || |||||||||||||||| ||||||| | || | | ||||||||| Sbjct: 125847 aggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgtatgac 125788 Query: 758 agagaaactgggcgttcgcgaggatttggttttgtaactatggc 801 ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 125787 agagaaactgggcgttcacgaggatttggttttgtaacaatggc 125744 Score = 56.0 bits (28), Expect = 3e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 126601 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 126542 Query: 522 ctattgaggaagctga 537 | ||||||| ||||| Sbjct: 126541 ccgttgaggaggctga 126526
>emb|CT832751.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA052J01, full insert sequence Length = 815 Score = 131 bits (66), Expect = 7e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 425 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 484 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgagg 464 ||| ||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 485 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgagg 534
>emb|CT832750.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA014L14, full insert sequence Length = 529 Score = 131 bits (66), Expect = 7e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 419 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 478 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgagg 464 ||| ||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 479 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgagg 528
>emb|CT832453.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN029E15, full insert sequence Length = 724 Score = 97.6 bits (49), Expect = 9e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 430 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 489 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtca 467 ||| |||||||| |||||||| |||| || |||||||||||| ||||||||| Sbjct: 490 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggtca 542
>ref|NM_001069096.1| Oryza sativa (japonica cultivar-group) Os09g0106200 (Os09g0106200) mRNA, partial cds Length = 741 Score = 97.6 bits (49), Expect = 9e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 405 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 464 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtca 467 ||| |||||||| |||||||| |||| || |||||||||||| ||||||||| Sbjct: 465 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggtca 517
>dbj|AK070749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064A16, full insert sequence Length = 742 Score = 97.6 bits (49), Expect = 9e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 406 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 465 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtca 467 ||| |||||||| |||||||| |||| || |||||||||||| ||||||||| Sbjct: 466 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggtca 518
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 93.7 bits (47), Expect = 1e-15 Identities = 95/111 (85%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 23776 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 23717 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| |||||||| |||||||| |||| || |||||||||||| ||||||| Sbjct: 23716 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggt 23666
>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781 Length = 350 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 662 tatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgag 721 ||||| || |||||||||||||||| ||| ||||||||||||||| | ||||||||||| Sbjct: 304 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagcgag 245 Query: 722 catggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcg 771 ||||| |||| || |||| | | |||| || |||||||| |||||||| Sbjct: 244 catggcaaagtggtcgatgccagggtcgtctacgacagagacactgggcg 195
>gb|DQ507850.1| Lilium longiflorum GRSF (GRSF) mRNA, complete cds Length = 1101 Score = 63.9 bits (32), Expect = 1e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 438 aggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggccagagccgtg 497 ||||||| || |||||||| ||||||||||||||||| || ||| | | |||||||| | Sbjct: 375 aggccggagtggtcgaggtagccgaggtcatttacaatagggagactgatcagagccggg 434 Query: 498 gatttggatttgttaccatgagtactattgaggaagctga 537 | ||||| ||||| |||||||| ||| | || |||||||| Sbjct: 435 ggtttgggtttgtgaccatgagcactgtcgaagaagctga 474 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 648 cttctttcagggcttatgttggtaacctgccatggcaag 686 ||||||| |||| ||||| ||||||||||||||||||| Sbjct: 582 cttctttgagggtctatgtcggtaacctgccatggcaag 620
>gb|AC189407.1| Brassica rapa subsp. pekinensis clone KBrB059G16, complete sequence Length = 99503 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Minus Query: 470 tacaacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgag 529 |||||||||||| ||| |||||| ||||| ||||||||||| || |||||||| | ||| Sbjct: 28326 tacaacagagagacagaccagagtcgtgggtttggatttgtgacaatgagtacggtggag 28267 Query: 530 gaagctga 537 |||||||| Sbjct: 28266 gaagctga 28259
>emb|X57079.1|NSCHRIB N.sylvestris DNA for 31kD chloroplast ribonucleoprotein Length = 5040 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 752 tatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggc 801 ||||||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct: 3632 tatgacagagaaactggccggtcgcgaggttttggttttgttacgatggc 3681
>emb|X53942.1|NSRNP31 Tobacco mRNA for 31 kDa chloroplast ribonucleoprotein Length = 1201 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 752 tatgacagagaaactgggcgttcgcgaggatttggttttgtaactatggc 801 ||||||||||||||||| || |||||||| ||||||||||| || ||||| Sbjct: 903 tatgacagagaaactggccggtcgcgaggttttggttttgttacgatggc 952
>ref|NM_129093.2| Arabidopsis thaliana RNA binding / nucleic acid binding (AT2G35410) mRNA, complete cds Length = 1100 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 776 cgaggatttggttttgtaactatggcttc 804 |||||||||| |||||||||||||||||| Sbjct: 416 cgaggatttgcttttgtaactatggcttc 444
>gb|BT000365.1| Arabidopsis thaliana putative chloroplast RNA binding protein precursor (At2g35410) mRNA, complete cds Length = 963 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 776 cgaggatttggttttgtaactatggcttc 804 |||||||||| |||||||||||||||||| Sbjct: 403 cgaggatttgcttttgtaactatggcttc 431
>gb|AC005314.3| Arabidopsis thaliana chromosome 2 clone T32F12 map ve016, complete sequence Length = 79881 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Minus Query: 776 cgaggatttggttttgtaactatggcttc 804 |||||||||| |||||||||||||||||| Sbjct: 50017 cgaggatttgcttttgtaactatggcttc 49989
>gb|AY042799.1| Arabidopsis thaliana putative chloroplast RNA binding protein precursor (At2g35410; T32F12.21) mRNA, complete cds Length = 1062 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 776 cgaggatttggttttgtaactatggcttc 804 |||||||||| |||||||||||||||||| Sbjct: 417 cgaggatttgcttttgtaactatggcttc 445
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 422 gcccagctcttcgaccaggccggtgtc 448 ||||||||| ||||||||||||||||| Sbjct: 2646751 gcccagctcatcgaccaggccggtgtc 2646777
>gb|DQ520158.1| Uncultured bacterium clone ML-3-12.2 16S ribosomal RNA gene, partial sequence Length = 1476 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 549 agacgtttaaccgctacgacatc 571 ||||||||||||||||||||||| Sbjct: 1005 agacgtttaaccgctacgacatc 983
>emb|Y14557.1|PSY14557 Pisum sativum mRNA for ribonucleoprotein Length = 1187 Score = 46.1 bits (23), Expect = 0.30 Identities = 44/51 (86%) Strand = Plus / Plus Query: 487 ccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 537 |||||| || || ||||||||||| ||||||||||| |||| |||||||| Sbjct: 445 ccagagtcgcggctttggatttgtaaccatgagtaccgttgaagaagctga 495
>gb|AF255058.1|AF255058 Pisum sativum 33 kDa ribonucleoprotein gene, complete cds Length = 2056 Score = 46.1 bits (23), Expect = 0.30 Identities = 44/51 (86%) Strand = Plus / Plus Query: 487 ccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 537 |||||| || || ||||||||||| ||||||||||| |||| |||||||| Sbjct: 544 ccagagtcgcggctttggatttgtaaccatgagtaccgttgaagaagctga 594
>gb|AY752097.1| Uncultured lake bacterium P38.30 16S ribosomal RNA gene, partial sequence Length = 1364 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 549 agacgtttaaccgctacgacatc 571 ||||||||||||||||||||||| Sbjct: 893 agacgtttaaccgctacgacatc 871
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 247 cgccgctgaggcgggcctcgactggg 272 ||||||| |||||||||||||||||| Sbjct: 1111270 cgccgctcaggcgggcctcgactggg 1111295
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 411 gcgagcggctcgcccagctcttcgaccagg 440 |||||||||||| |||| |||||||||||| Sbjct: 4840150 gcgagcggctcggccagatcttcgaccagg 4840179
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 438 aggccggtgtcgtcgaggtcgccgag 463 ||||||||| |||||||||||||||| Sbjct: 4212132 aggccggtggcgtcgaggtcgccgag 4212157
>ref|NM_115437.1| Arabidopsis thaliana unknown protein (AT3G55790) mRNA, complete cds Length = 312 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 174 cggtggcggaggaggaggccgtggtggcgg 203
>gb|DQ316359.1| Uncultured actinobacterium clone ST11-14 16S ribosomal RNA gene, partial sequence Length = 1492 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 agacgtttaaccgctacgacat 570 |||||||||||||||||||||| Sbjct: 1014 agacgtttaaccgctacgacat 993
>emb|X53933.1|NSRNP28 Tobacco mRNA for 28 kDa chloroplast ribonucleoprotein Length = 1079 Score = 44.1 bits (22), Expect = 1.2 Identities = 43/50 (86%) Strand = Plus / Plus Query: 494 cgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 543 ||||||||||| ||||| || ||||| ||| | || |||||||||||||| Sbjct: 436 cgtggatttgggtttgtgacgatgagcactgtggaagaagctgacaaagc 485
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 96541 cggtggcggaggaggaggccgtggtggcgg 96570
>emb|AJ010443.1|HSA010443 Homo sapiens mRNA for immunoglobulin IgG3 heavy chain, anti-RhD, therad 7 Length = 529 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgacg 304 |||||||||||||||||||||| Sbjct: 511 ggaagctgaagagacggtgacg 490
>gb|L31376.1|SALGRP1C Sinapis alba RNA-binding protein homologue (grp1c) mRNA, unspliced intron Length = 930 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 559 cggtggcggaggaggaggccgtggtggcgg 588
>gb|L31375.1|SALGRP1B Sinapis alba RNA-binding protein homologue (grp1b) mRNA, unspliced intron Length = 811 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 413 cggtggcggaggaggaggccgtggtggcgg 442
>gb|L31374.1|SALGRP1A Sinapis alba RNA-binding protein homologue (grp1a) mRNA, complete cds Length = 683 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 285 cggtggcggaggaggaggccgtggtggcgg 314
>gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding protein mRNA, complete cds Length = 1264 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 500 tttggatttgttaccatgagtactattgaggaagctga 537 ||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 473 tttgggtttgtgaccatgagcactgttgaggaagctga 510
>gb|DQ926277.1| Homo sapiens clone IM1 4y36 immunoglobulin heavy chain variable region mRNA, partial cds Length = 380 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 372 ggaagctgaagagacggtgac 352
>gb|DQ926114.1| Homo sapiens clone H2 1y16 immunoglobulin heavy chain variable region mRNA, partial cds Length = 370 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 366 ggaagctgaagagacggtgac 346
>emb|CT832922.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN029F21, full insert sequence Length = 1571 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 361 ggatttggatttgttaccatg 381
>ref|NM_001056185.1| Oryza sativa (japonica cultivar-group) Os03g0265600 (Os03g0265600) mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 344 ggatttggatttgttaccatg 364
>ref|NM_001052857.1| Oryza sativa (japonica cultivar-group) Os02g0221500 (Os02g0221500) mRNA, complete cds Length = 1925 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 764 actgggcgttcgcgaggatttggttttgt 792 ||||||||||| |||||||||||||||| Sbjct: 790 actgggcgttctagaggatttggttttgt 818
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 aggaggagcccgtggtggcgg 326 ||||||||||||||||||||| Sbjct: 1833059 aggaggagcccgtggtggcgg 1833039
>ref|NM_112902.2| Arabidopsis thaliana CYP705A20; heme binding / iron ion binding / monooxygenase/ oxygen binding (CYP705A20) mRNA, complete cds Length = 1862 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1172 cgaagaaggttttgttggtaa 1192 ||||||||||||||||||||| Sbjct: 825 cgaagaaggttttgttggtaa 845
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gcgggcctcgactgggccgacgcgg 281 ||||||||||||||| ||||||||| Sbjct: 817328 gcgggcctcgactggcccgacgcgg 817352
>gb|AY393102.1| Homo sapiens clone RA702-G6-29.fa immunoglobulin heavy chain mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 434 ggaagctgaagagacggtgac 414
>gb|AY393025.1| Homo sapiens clone RA702-G2-11.fa immunoglobulin heavy chain mRNA, partial cds Length = 308 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 142 ggaagctgaagagacggtgac 122
>gb|AY393471.1| Homo sapiens isolate RA129-G5-8.fa immunoglobulin heavy chain variable region mRNA, partial cds Length = 444 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 348 ggaagctgaagagacggtgac 328
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 tcgctcttccaccccgcgttc 127 ||||||||||||||||||||| Sbjct: 15707986 tcgctcttccaccccgcgttc 15707966
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 764 actgggcgttcgcgaggatttggttttgt 792 ||||||||||| |||||||||||||||| Sbjct: 6784916 actgggcgttctagaggatttggttttgt 6784888 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 31982226 ggaggaggagcccgtggtggc 31982206
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 8739191 ggatttggatttgttaccatg 8739171
>emb|AL121908.16|HSDJ719C8 Human DNA sequence from clone RP4-719C8 on chromosome 20 Contains three different 5' ends of the C20orf101 gene and three CpG islands, complete sequence Length = 150985 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 107639 ggaggaggagcccgtggtggc 107659
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 85007 ggatttggatttgttaccatg 84987
>gb|BT006102.1| Arabidopsis thaliana clone U51190 putative cytochrome P450 (At3g20110) mRNA, complete cds Length = 1564 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1172 cgaagaaggttttgttggtaa 1192 ||||||||||||||||||||| Sbjct: 662 cgaagaaggttttgttggtaa 682
>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds Length = 1217 Score = 42.1 bits (21), Expect = 4.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatgagtactattgaggaagctga 537 |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 551 ggatttgggtttgtaaccatgagcacagttgaggaagctga 591
>gb|AC013410.5| Homo sapiens BAC clone RP11-495I2 from 2, complete sequence Length = 200900 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1134 aggctactgtaatgatgccctagtgttct 1162 |||||||||||||| ||||||||||||| Sbjct: 170154 aggctactgtaatgcagccctagtgttct 170126
>gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complete sequence Length = 106992 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1094 gttaatttcttgtcaataccatgag 1118 |||||||||||||||| |||||||| Sbjct: 5887 gttaatttcttgtcaaaaccatgag 5863
>gb|AC092380.4| Homo sapiens chromosome 16 clone RP11-727M7, complete sequence Length = 167071 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1115 tgagttcaacttttcaagtag 1135 ||||||||||||||||||||| Sbjct: 141190 tgagttcaacttttcaagtag 141210
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 143227 ggaggaggagcccgtggtggc 143207
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 2601 ggaggaggagcccgtggtggc 2581
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 764 actgggcgttcgcgaggatttggttttgt 792 ||||||||||| |||||||||||||||| Sbjct: 2642 actgggcgttctagaggatttggttttgt 2614
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 764 actgggcgttcgcgaggatttggttttgt 792 ||||||||||| |||||||||||||||| Sbjct: 105969 actgggcgttctagaggatttggttttgt 105941
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21 Length = 83253 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1172 cgaagaaggttttgttggtaa 1192 ||||||||||||||||||||| Sbjct: 42374 cgaagaaggttttgttggtaa 42394
>dbj|AK118830.1| Arabidopsis thaliana At3g20110 mRNA for putative cytochrome P450, complete cds, clone: RAFL21-16-G19 Length = 1862 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1172 cgaagaaggttttgttggtaa 1192 ||||||||||||||||||||| Sbjct: 825 cgaagaaggttttgttggtaa 845
>dbj|AK120313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055L11, full insert sequence Length = 2473 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 764 actgggcgttcgcgaggatttggttttgt 792 ||||||||||| |||||||||||||||| Sbjct: 1565 actgggcgttctagaggatttggttttgt 1593
>dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A08, full insert sequence Length = 1926 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 764 actgggcgttcgcgaggatttggttttgt 792 ||||||||||| |||||||||||||||| Sbjct: 791 actgggcgttctagaggatttggttttgt 819
>dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026M08, full insert sequence Length = 1438 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 345 ggatttggatttgttaccatg 365
>emb|AJ305231.1|HSA305231 Homo sapiens mRNA for immunoglobulin heavy chain variable region V(D)J-rearrangement (IGHV gene), patient 10 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 320 ggaagctgaagagacggtgac 300
>gb|AY107260.1| Zea mays PCO071008 mRNA sequence Length = 737 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 916 cgcagcggcggagagcatggc 936 ||||||||||||||||||||| Sbjct: 82 cgcagcggcggagagcatggc 62
>gb|AF103133.1|AF103133 Homo sapiens clone N136 immunoglobulin heavy chain variable region mRNA, partial cds Length = 402 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 372 ggaagctgaagagacggtgac 352
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tcgctcttccaccccgcgttc 127 ||||||||||||||||||||| Sbjct: 117669 tcgctcttccaccccgcgttc 117689
>emb|AJ002775.1|HSAJ2775 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain Patient 2, 4 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002774.1|HSAJ2774 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain Patient 2, 3 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002773.1|HSAJ2773 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 2,2 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002772.1|HSAJ2772 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 2,1 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002770.1|HSAJ2770 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 1,3 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002769.1|HSAJ2769 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 1,2 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002768.1|HSAJ2768 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 1,1 Length = 407 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ222559.1|HSAJ22559 Homo sapiens mRNA for IgG, clone GD2 Length = 390 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 363 ggaagctgaagagacggtgac 343 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 179,813,206 Number of extensions: 9731742 Number of successful extensions: 191828 Number of sequences better than 10.0: 95 Number of HSP's gapped: 191816 Number of HSP's successfully gapped: 127 Length of query: 1235 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1212 Effective length of database: 18,503,978,556 Effective search space: 22426822009872 Effective search space used: 22426822009872 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)