| Clone Name | FLbaf146b15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 50.1 bits (25), Expect = 0.037 Identities = 43/49 (87%) Strand = Plus / Plus Query: 708 tgtcctactctggaccacatggacaaaacgccttgcatgtcgcagtgct 756 |||||||||||||||| || || | |||||| ||||||||||| ||||| Sbjct: 6991878 tgtcctactctggacctcaaggccgaaacgctttgcatgtcgcggtgct 6991926 Score = 44.1 bits (22), Expect = 2.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1579 cttccacgcgttcatcatcgccaacacactggcg 1612 |||| ||| |||||||||||||||||| |||||| Sbjct: 9858333 cttcgacgtgttcatcatcgccaacacgctggcg 9858300
>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01 Length = 160643 Score = 50.1 bits (25), Expect = 0.037 Identities = 43/49 (87%) Strand = Plus / Plus Query: 708 tgtcctactctggaccacatggacaaaacgccttgcatgtcgcagtgct 756 |||||||||||||||| || || | |||||| ||||||||||| ||||| Sbjct: 63049 tgtcctactctggacctcaaggccgaaacgctttgcatgtcgcggtgct 63097
>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence Length = 181261 Score = 46.1 bits (23), Expect = 0.58 Identities = 23/23 (100%) Strand = Plus / Minus Query: 22 gagaacacatatacatacacata 44 ||||||||||||||||||||||| Sbjct: 39086 gagaacacatatacatacacata 39064
>gb|AC021660.16| Homo sapiens 3 BAC RP11-227H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164567 Score = 46.1 bits (23), Expect = 0.58 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 642 tgtacctggcag-tctcactgggacatgatg 671 |||||||||||| |||||||||||||||||| Sbjct: 47182 tgtacctggcagctctcactgggacatgatg 47152
>gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence Length = 41334 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2265 tatttaaatttgaaataaattt 2286 |||||||||||||||||||||| Sbjct: 31968 tatttaaatttgaaataaattt 31989
>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence Length = 249301 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 acacatatacatacacatagtt 47 |||||||||||||||||||||| Sbjct: 163271 acacatatacatacacatagtt 163292
>gb|AC154547.3| Mus musculus BAC clone RP23-433L1 from chromosome 13, complete sequence Length = 211599 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 gaacacatatacatacacatag 45 |||||||||||||||||||||| Sbjct: 94480 gaacacatatacatacacatag 94501
>dbj|AK142121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230044C04 product:unclassifiable, full insert sequence Length = 3026 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 acacatatacatacacatagtt 47 |||||||||||||||||||||| Sbjct: 2482 acacatatacatacacatagtt 2503
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 710 tcctactctggaccacatggacaaaa 735 |||||||| ||||||||||||||||| Sbjct: 10741626 tcctactccggaccacatggacaaaa 10741601
>gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, complete sequence Length = 207883 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2264 atatttaaatttgaaataaatt 2285 |||||||||||||||||||||| Sbjct: 129772 atatttaaatttgaaataaatt 129751
>emb|AL391216.10| Human DNA sequence from clone RP11-241C9 on chromosome 1 Contains the 5' end of the ESSRG gene for estrogen-related receptor gamma and two CpG islands, complete sequence Length = 101542 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 663 gacatgatgatattgcatactt 684 |||||||||||||||||||||| Sbjct: 64274 gacatgatgatattgcatactt 64253
>emb|AL356098.10| Human DNA sequence from clone RP11-457L23 on chromosome 13 Contains an Alport syndrome mental retardation midface hypoplasia and elliptocytosis chromosomal region gene 1 (AMMECR1) pseudogene, complete sequence Length = 186305 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1362 gctgtgatttgttcctcaaaaa 1383 |||||||||||||||||||||| Sbjct: 169636 gctgtgatttgttcctcaaaaa 169657
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1280 caaggccttaatttcttgctga 1301 |||||||||||||||||||||| Sbjct: 42130 caaggccttaatttcttgctga 42109
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 44.1 bits (22), Expect = 2.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1579 cttccacgcgttcatcatcgccaacacactggcg 1612 |||| ||| |||||||||||||||||| |||||| Sbjct: 13780 cttcgacgtgttcatcatcgccaacacgctggcg 13747
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 44.1 bits (22), Expect = 2.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1579 cttccacgcgttcatcatcgccaacacactggcg 1612 |||| ||| |||||||||||||||||| |||||| Sbjct: 41020 cttcgacgtgttcatcatcgccaacacgctggcg 40987
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 710 tcctactctggaccacatggacaaaa 735 |||||||| ||||||||||||||||| Sbjct: 106473 tcctactccggaccacatggacaaaa 106448
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 44.1 bits (22), Expect = 2.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 710 tcctactctggaccacatggacaaaa 735 |||||||| ||||||||||||||||| Sbjct: 7975 tcctactccggaccacatggacaaaa 7950
>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence Length = 236806 Score = 44.1 bits (22), Expect = 2.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 acacatatacatacacatagtt 47 |||||||||||||||||||||| Sbjct: 52146 acacatatacatacacatagtt 52167
>gb|AC191645.2| Gallus gallus BAC clone CH261-144L11 from chromosome z, complete sequence Length = 207583 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1958 atttctggatagtaatttcaaattc 1982 |||||||||||| |||||||||||| Sbjct: 173024 atttctggataggaatttcaaattc 173048
>gb|AC186988.2| Canis Familiaris chromosome 29, clone XX-319E23, complete sequence Length = 185140 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1545 cagctggaatagctatgcttg 1565 ||||||||||||||||||||| Sbjct: 87296 cagctggaatagctatgcttg 87276
>gb|BC123210.1| Xenopus laevis hypothetical protein MGC154449, mRNA (cDNA clone MGC:154449 IMAGE:8078294), complete cds Length = 1377 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 ctgccagagctggaggggtga 428 ||||||||||||||||||||| Sbjct: 192 ctgccagagctggaggggtga 172
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2151 tgtatattccatatttcatat 2171 ||||||||||||||||||||| Sbjct: 4131880 tgtatattccatatttcatat 4131860
>ref|XM_395991.3| PREDICTED: Apis mellifera similar to Serine protease inhibitor 4 CG9453-PB, isoform B (LOC412536), mRNA Length = 1423 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1839 atgttgtttggtttatattca 1859 ||||||||||||||||||||| Sbjct: 947 atgttgtttggtttatattca 927
>emb|CR974585.16| Mouse DNA sequence from clone RP23-107N10 on chromosome 12, complete sequence Length = 177782 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1745 gcatttgtgtttggactctacgtggtgct 1773 |||||| |||||||||||||| ||||||| Sbjct: 54175 gcatttctgtttggactctacatggtgct 54203
>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome Length = 7750108 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1339 tggagctaaaactgctgctta 1359 ||||||||||||||||||||| Sbjct: 7171251 tggagctaaaactgctgctta 7171231
>ref|NM_121163.1| Arabidopsis thaliana ATP binding / transmembrane receptor (AT5G11250) mRNA, complete cds Length = 3570 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1694 ttcatcatctccatcgtctttgtct 1718 ||||||||||||||| ||||||||| Sbjct: 117 ttcatcatctccatcttctttgtct 141
>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0058P12, complete sequence Length = 173073 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 635 tcgcccttgtacctggcagtctcactggg 663 ||||| ||||||||||| ||||||||||| Sbjct: 83195 tcgccgttgtacctggcggtctcactggg 83167
>gb|BC073130.1| Xenopus laevis cDNA clone IMAGE:5073834 Length = 1532 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 ctgccagagctggaggggtga 428 ||||||||||||||||||||| Sbjct: 209 ctgccagagctggaggggtga 189
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence Length = 112873 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2159 ccatatttcatatgttcacag 2179 ||||||||||||||||||||| Sbjct: 55106 ccatatttcatatgttcacag 55086
>gb|AC121996.3| Mus musculus BAC clone RP24-312F5 from chromosome 3, complete sequence Length = 169912 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 548 gctgacaaggaaattatgaag 568 ||||||||||||||||||||| Sbjct: 126279 gctgacaaggaaattatgaag 126259
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1532 ggtaagcatggaacagctgga 1552 ||||||||||||||||||||| Sbjct: 9589 ggtaagcatggaacagctgga 9609
>gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, complete sequence Length = 211123 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2080 tatatatatcaagaagaaactacac 2104 ||||||||| ||||||||||||||| Sbjct: 119365 tatatatataaagaagaaactacac 119341
>dbj|AP001916.1| Mus musculus genomic DNA, chromosome 7, clone:B131C, complete sequence Length = 40333 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2080 tatatatatcaagaagaaactacac 2104 ||||||||| ||||||||||||||| Sbjct: 21112 tatatatataaagaagaaactacac 21088
>gb|AC104296.4| Mus Musculus Strain 129S6/SvEvTac chromosome 2 BAC, RP22-161J17, complete sequence Length = 161984 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gaacacatatacatacacata 44 ||||||||||||||||||||| Sbjct: 61795 gaacacatatacatacacata 61815
>ref|XM_626772.1| Cryptosporidium parvum Iowa II putative choline kinase (cgd3_2030), partial mRNA Length = 1218 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2261 ttcatatttaaatttgaaata 2281 ||||||||||||||||||||| Sbjct: 909 ttcatatttaaatttgaaata 889
>ref|XM_663590.1| Cryptosporidium hominis TU502 choline kinase GmCK2p-like protein (Chro.30240) partial mRNA Length = 1203 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2261 ttcatatttaaatttgaaata 2281 ||||||||||||||||||||| Sbjct: 894 ttcatatttaaatttgaaata 874
>gb|AC104113.3| Homo sapiens chromosome 5 clone RP11-231G3, complete sequence Length = 105743 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 acacatatacatacacatagt 46 ||||||||||||||||||||| Sbjct: 15701 acacatatacatacacatagt 15721
>ref|NM_175211.2| Mus musculus Ral GEF with PH domain and SH3 binding motif 1 (Ralgps1), mRNA dbj|AK076767.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930441N24 product:similar to RAL GUANINE NUCLEOTIDE EXCHANGE FACTOR RALGPS1A [Homo sapiens], full insert sequence Length = 2740 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 gagaaggccaagcacctgctggacg 371 |||||||||| |||||||||||||| Sbjct: 1364 gagaaggccaggcacctgctggacg 1388
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 9.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 635 tcgcccttgtacctggcagtctcactggg 663 ||||| ||||||||||| ||||||||||| Sbjct: 4911698 tcgccgttgtacctggcggtctcactggg 4911726
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2264 atatttaaatttgaaataaat 2284 ||||||||||||||||||||| Sbjct: 3822978 atatttaaatttgaaataaat 3822958
>gb|AC108099.2| Homo sapiens chromosome 5 clone RP11-112L7, complete sequence Length = 172945 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2249 atacacgtgagtttcatatttaaat 2273 |||||||||||||| |||||||||| Sbjct: 41032 atacacgtgagtttaatatttaaat 41008
>gb|AC079301.6| Homo sapiens BAC clone RP11-184F13 from 4, complete sequence Length = 153736 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2265 tatttaaatttgaaataaatt 2285 ||||||||||||||||||||| Sbjct: 142626 tatttaaatttgaaataaatt 142646
>gb|AC024243.8| Homo sapiens BAC clone RP11-528I4 from 4, complete sequence Length = 163857 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 952 acatgtggcagcaatgagaag 972 ||||||||||||||||||||| Sbjct: 49214 acatgtggcagcaatgagaag 49234
>gb|AC022445.6| Homo sapiens chromosome 5 clone RP11-489L13, complete sequence Length = 180807 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 acacatatacatacacatagt 46 ||||||||||||||||||||| Sbjct: 154803 acacatatacatacacatagt 154823
>emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0080E14, complete sequence Length = 148064 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2264 atatttaaatttgaaataaat 2284 ||||||||||||||||||||| Sbjct: 49959 atatttaaatttgaaataaat 49939
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project) Length = 110992 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1694 ttcatcatctccatcgtctttgtct 1718 ||||||||||||||| ||||||||| Sbjct: 54605 ttcatcatctccatcttctttgtct 54581
>emb|AL645842.15| Mouse DNA sequence from clone RP23-20A9 on chromosome 11 Contains two novel genes and the 3' end of the Accn1 gene for neuronal amiloride-sensitive cation channel 1 (degenerin), complete sequence Length = 114190 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gagaacacatatacatacaca 42 ||||||||||||||||||||| Sbjct: 101637 gagaacacatatacatacaca 101617
>gb|AC007317.3| Homo sapiens BAC clone RP11-414K7 from 2, complete sequence Length = 200709 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2265 tatttaaatttgaaataaatt 2285 ||||||||||||||||||||| Sbjct: 6576 tatttaaatttgaaataaatt 6556
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2151 tgtatattccatatttcatat 2171 ||||||||||||||||||||| Sbjct: 154891 tgtatattccatatttcatat 154911
>gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, complete sequence Length = 219399 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gagaacacatatacatacaca 42 ||||||||||||||||||||| Sbjct: 27597 gagaacacatatacatacaca 27577
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1585 cgcgttcatcatcgccaacac 1605 ||||||||||||||||||||| Sbjct: 462587 cgcgttcatcatcgccaacac 462567
>gb|AY213194.1| Homo sapiens Cockayne syndrome 1 (classical) (CKN1) gene, complete cds Length = 74023 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 acacatatacatacacatagt 46 ||||||||||||||||||||| Sbjct: 62523 acacatatacatacacatagt 62543
>gb|AC137551.1| Homo sapiens chromosome 5 clone RP11-867C24, complete sequence Length = 183535 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2249 atacacgtgagtttcatatttaaat 2273 |||||||||||||| |||||||||| Sbjct: 134813 atacacgtgagtttaatatttaaat 134789
>emb|AL672306.11| Mouse DNA sequence from clone RP23-149O3 on chromosome X, complete sequence Length = 211871 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 710 tcctactctggaccacatgga 730 ||||||||||||||||||||| Sbjct: 52252 tcctactctggaccacatgga 52232
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1185 ttttctatcttctaattcagaaccc 1209 |||| |||||||||||||||||||| Sbjct: 2130267 ttttttatcttctaattcagaaccc 2130291
>gb|AC126692.4| Mus musculus BAC clone RP23-246J18 from 6, complete sequence Length = 195236 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1532 ggtaagcatggaacagctgga 1552 ||||||||||||||||||||| Sbjct: 116133 ggtaagcatggaacagctgga 116153
>gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complete sequence Length = 169769 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gaacacatatacatacacata 44 ||||||||||||||||||||| Sbjct: 105889 gaacacatatacatacacata 105909
>emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chromosome 2, complete sequence Length = 46845 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 gagaaggccaagcacctgctggacg 371 |||||||||| |||||||||||||| Sbjct: 30081 gagaaggccaggcacctgctggacg 30057
>emb|AJ271885.2|MMU271885 Mus musculus partial Kcnq1 gene for potassium channel protein and associated 187740 bp genomic fragment Length = 187740 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2080 tatatatatcaagaagaaactacac 2104 ||||||||| ||||||||||||||| Sbjct: 30761 tatatatataaagaagaaactacac 30737
>gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human ortholog 4q31.21, complete sequence Length = 142956 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1817 gtagcccctttcctttttctc 1837 ||||||||||||||||||||| Sbjct: 38887 gtagcccctttcctttttctc 38907
>dbj|AP001293.1| Mus musculus genomic DNA, chromosome 7, clone:B131, complete sequence Length = 108333 Score = 42.1 bits (21), Expect = 9.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2080 tatatatatcaagaagaaactacac 2104 ||||||||| ||||||||||||||| Sbjct: 89112 tatatatataaagaagaaactacac 89088
>emb|AL844481.5| Mouse DNA sequence from clone RP23-44H23 on chromosome 2, complete sequence Length = 109532 Score = 42.1 bits (21), Expect = 9.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gaacacatatacatacacata 44 ||||||||||||||||||||| Sbjct: 45594 gaacacatatacatacacata 45614 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 426,831,750 Number of extensions: 22248021 Number of successful extensions: 175619 Number of sequences better than 10.0: 62 Number of HSP's gapped: 175619 Number of HSP's successfully gapped: 63 Length of query: 2352 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2329 Effective length of database: 18,503,978,556 Effective search space: 43095766056924 Effective search space used: 43095766056924 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)