ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf146b15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.037
2dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.037
3gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome... 46 0.58
4gb|AC021660.16| Homo sapiens 3 BAC RP11-227H4 (Roswell Park Canc... 46 0.58
5gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence 44 2.3
6gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome... 44 2.3
7gb|AC154547.3| Mus musculus BAC clone RP23-433L1 from chromosome... 44 2.3
8dbj|AK142121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 44 2.3
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 2.3
10gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, comple... 44 2.3
11emb|AL391216.10| Human DNA sequence from clone RP11-241C9 on chr... 44 2.3
12emb|AL356098.10| Human DNA sequence from clone RP11-457L23 on ch... 44 2.3
13emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on ch... 44 2.3
14dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.3
15dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic D... 44 2.3
16emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb... 44 2.3
17emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194... 44 2.3
18gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complet... 44 2.3
19gb|AC191645.2| Gallus gallus BAC clone CH261-144L11 from chromos... 42 9.0
20gb|AC186988.2| Canis Familiaris chromosome 29, clone XX-319E23, ... 42 9.0
21gb|BC123210.1| Xenopus laevis hypothetical protein MGC154449, mR... 42 9.0
22gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s... 42 9.0
23ref|XM_395991.3| PREDICTED: Apis mellifera similar to Serine pro... 42 9.0
24emb|CR974585.16| Mouse DNA sequence from clone RP23-107N10 on ch... 42 9.0
25gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome 42 9.0
26ref|NM_121163.1| Arabidopsis thaliana ATP binding / transmembran... 42 9.0
27gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome... 42 9.0
28gb|BC073130.1| Xenopus laevis cDNA clone IMAGE:5073834 42 9.0
29gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete se... 42 9.0
30gb|AC121996.3| Mus musculus BAC clone RP24-312F5 from chromosome... 42 9.0
31gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cance... 42 9.0
32gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, com... 42 9.0
33dbj|AP001916.1| Mus musculus genomic DNA, chromosome 7, clone:B1... 42 9.0
34gb|AC104296.4| Mus Musculus Strain 129S6/SvEvTac chromosome 2 BA... 42 9.0
35ref|XM_626772.1| Cryptosporidium parvum Iowa II putative choline... 42 9.0
36ref|XM_663590.1| Cryptosporidium hominis TU502 choline kinase Gm... 42 9.0
37gb|AC104113.3| Homo sapiens chromosome 5 clone RP11-231G3, compl... 42 9.0
38ref|NM_175211.2| Mus musculus Ral GEF with PH domain and SH3 bin... 42 9.0
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 9.0
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 9.0
41gb|AC108099.2| Homo sapiens chromosome 5 clone RP11-112L7, compl... 42 9.0
42gb|AC079301.6| Homo sapiens BAC clone RP11-184F13 from 4, comple... 42 9.0
43gb|AC024243.8| Homo sapiens BAC clone RP11-528I4 from 4, complet... 42 9.0
44gb|AC022445.6| Homo sapiens chromosome 5 clone RP11-489L13, comp... 42 9.0
45emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4,... 42 9.0
46emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BA... 42 9.0
47emb|AL645842.15| Mouse DNA sequence from clone RP23-20A9 on chro... 42 9.0
48gb|AC007317.3| Homo sapiens BAC clone RP11-414K7 from 2, complet... 42 9.0
49gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, r... 42 9.0
50gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, comple... 42 9.0
51dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 9.0
52gb|AY213194.1| Homo sapiens Cockayne syndrome 1 (classical) (CKN... 42 9.0
53gb|AC137551.1| Homo sapiens chromosome 5 clone RP11-867C24, comp... 42 9.0
54emb|AL672306.11| Mouse DNA sequence from clone RP23-149O3 on chr... 42 9.0
55gb|AE015927.1| Clostridium tetani E88, complete genome 42 9.0
56gb|AC126692.4| Mus musculus BAC clone RP23-246J18 from 6, comple... 42 9.0
57gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complet... 42 9.0
58emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chro... 42 9.0
59emb|AJ271885.2|MMU271885 Mus musculus partial Kcnq1 gene for pot... 42 9.0
60gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human... 42 9.0
61dbj|AP001293.1| Mus musculus genomic DNA, chromosome 7, clone:B1... 42 9.0
62emb|AL844481.5| Mouse DNA sequence from clone RP23-44H23 on chro... 42 9.0

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651
 Score = 50.1 bits (25), Expect = 0.037
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                
Query: 708     tgtcctactctggaccacatggacaaaacgccttgcatgtcgcagtgct 756
               |||||||||||||||| || || | |||||| ||||||||||| |||||
Sbjct: 6991878 tgtcctactctggacctcaaggccgaaacgctttgcatgtcgcggtgct 6991926



 Score = 44.1 bits (22), Expect = 2.3
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 1579    cttccacgcgttcatcatcgccaacacactggcg 1612
               |||| ||| |||||||||||||||||| ||||||
Sbjct: 9858333 cttcgacgtgttcatcatcgccaacacgctggcg 9858300



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>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0044K01
          Length = 160643

 Score = 50.1 bits (25), Expect = 0.037
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 708   tgtcctactctggaccacatggacaaaacgccttgcatgtcgcagtgct 756
             |||||||||||||||| || || | |||||| ||||||||||| |||||
Sbjct: 63049 tgtcctactctggacctcaaggccgaaacgctttgcatgtcgcggtgct 63097



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>gb|AC132346.3| Mus musculus BAC clone RP24-179K8 from chromosome 3, complete sequence
          Length = 181261

 Score = 46.1 bits (23), Expect = 0.58
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 22    gagaacacatatacatacacata 44
             |||||||||||||||||||||||
Sbjct: 39086 gagaacacatatacatacacata 39064



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>gb|AC021660.16| Homo sapiens 3 BAC RP11-227H4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 164567

 Score = 46.1 bits (23), Expect = 0.58
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                            
Query: 642   tgtacctggcag-tctcactgggacatgatg 671
             |||||||||||| ||||||||||||||||||
Sbjct: 47182 tgtacctggcagctctcactgggacatgatg 47152



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>gb|U23450.1| Caenorhabditis elegans cosmid C30B5, complete sequence
          Length = 41334

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2265  tatttaaatttgaaataaattt 2286
             ||||||||||||||||||||||
Sbjct: 31968 tatttaaatttgaaataaattt 31989



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>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence
          Length = 249301

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 26     acacatatacatacacatagtt 47
              ||||||||||||||||||||||
Sbjct: 163271 acacatatacatacacatagtt 163292



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>gb|AC154547.3| Mus musculus BAC clone RP23-433L1 from chromosome 13, complete sequence
          Length = 211599

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    gaacacatatacatacacatag 45
             ||||||||||||||||||||||
Sbjct: 94480 gaacacatatacatacacatag 94501



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>dbj|AK142121.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230044C04 product:unclassifiable, full
            insert sequence
          Length = 3026

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 26   acacatatacatacacatagtt 47
            ||||||||||||||||||||||
Sbjct: 2482 acacatatacatacacatagtt 2503



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 710      tcctactctggaccacatggacaaaa 735
                |||||||| |||||||||||||||||
Sbjct: 10741626 tcctactccggaccacatggacaaaa 10741601



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>gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, complete sequence
          Length = 207883

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2264   atatttaaatttgaaataaatt 2285
              ||||||||||||||||||||||
Sbjct: 129772 atatttaaatttgaaataaatt 129751



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>emb|AL391216.10| Human DNA sequence from clone RP11-241C9 on chromosome 1 Contains the
             5' end of the ESSRG gene for estrogen-related receptor
             gamma and two CpG islands, complete sequence
          Length = 101542

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 663   gacatgatgatattgcatactt 684
             ||||||||||||||||||||||
Sbjct: 64274 gacatgatgatattgcatactt 64253



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>emb|AL356098.10| Human DNA sequence from clone RP11-457L23 on chromosome 13 Contains an
              Alport syndrome mental retardation midface hypoplasia and
              elliptocytosis chromosomal region gene 1 (AMMECR1)
              pseudogene, complete sequence
          Length = 186305

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1362   gctgtgatttgttcctcaaaaa 1383
              ||||||||||||||||||||||
Sbjct: 169636 gctgtgatttgttcctcaaaaa 169657



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>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete
             sequence
          Length = 192919

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1280  caaggccttaatttcttgctga 1301
             ||||||||||||||||||||||
Sbjct: 42130 caaggccttaatttcttgctga 42109



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>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0017I18
          Length = 146304

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 1579  cttccacgcgttcatcatcgccaacacactggcg 1612
             |||| ||| |||||||||||||||||| ||||||
Sbjct: 13780 cttcgacgtgttcatcatcgccaacacgctggcg 13747



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>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0095I04
          Length = 138924

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 1579  cttccacgcgttcatcatcgccaacacactggcg 1612
             |||| ||| |||||||||||||||||| ||||||
Sbjct: 41020 cttcgacgtgttcatcatcgccaacacgctggcg 40987



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>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 135105

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 710    tcctactctggaccacatggacaaaa 735
              |||||||| |||||||||||||||||
Sbjct: 106473 tcctactccggaccacatggacaaaa 106448



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>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 119388

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 710  tcctactctggaccacatggacaaaa 735
            |||||||| |||||||||||||||||
Sbjct: 7975 tcctactccggaccacatggacaaaa 7950



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>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence
          Length = 236806

 Score = 44.1 bits (22), Expect = 2.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 26    acacatatacatacacatagtt 47
             ||||||||||||||||||||||
Sbjct: 52146 acacatatacatacacatagtt 52167



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>gb|AC191645.2| Gallus gallus BAC clone CH261-144L11 from chromosome z, complete sequence
          Length = 207583

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1958   atttctggatagtaatttcaaattc 1982
              |||||||||||| ||||||||||||
Sbjct: 173024 atttctggataggaatttcaaattc 173048



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>gb|AC186988.2| Canis Familiaris chromosome 29, clone XX-319E23, complete sequence
          Length = 185140

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1545  cagctggaatagctatgcttg 1565
             |||||||||||||||||||||
Sbjct: 87296 cagctggaatagctatgcttg 87276



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>gb|BC123210.1| Xenopus laevis hypothetical protein MGC154449, mRNA (cDNA clone
           MGC:154449 IMAGE:8078294), complete cds
          Length = 1377

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 408 ctgccagagctggaggggtga 428
           |||||||||||||||||||||
Sbjct: 192 ctgccagagctggaggggtga 172



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>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence
          Length = 27905053

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 2151    tgtatattccatatttcatat 2171
               |||||||||||||||||||||
Sbjct: 4131880 tgtatattccatatttcatat 4131860



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>ref|XM_395991.3| PREDICTED: Apis mellifera similar to Serine protease inhibitor 4
            CG9453-PB, isoform B (LOC412536), mRNA
          Length = 1423

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1839 atgttgtttggtttatattca 1859
            |||||||||||||||||||||
Sbjct: 947  atgttgtttggtttatattca 927



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>emb|CR974585.16| Mouse DNA sequence from clone RP23-107N10 on chromosome 12, complete
             sequence
          Length = 177782

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1745  gcatttgtgtttggactctacgtggtgct 1773
             |||||| |||||||||||||| |||||||
Sbjct: 54175 gcatttctgtttggactctacatggtgct 54203



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>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome
          Length = 7750108

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1339    tggagctaaaactgctgctta 1359
               |||||||||||||||||||||
Sbjct: 7171251 tggagctaaaactgctgctta 7171231



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>ref|NM_121163.1| Arabidopsis thaliana ATP binding / transmembrane receptor (AT5G11250)
            mRNA, complete cds
          Length = 3570

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1694 ttcatcatctccatcgtctttgtct 1718
            ||||||||||||||| |||||||||
Sbjct: 117  ttcatcatctccatcttctttgtct 141



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>gb|AC139170.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0058P12, complete sequence
          Length = 173073

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 635   tcgcccttgtacctggcagtctcactggg 663
             ||||| ||||||||||| |||||||||||
Sbjct: 83195 tcgccgttgtacctggcggtctcactggg 83167



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>gb|BC073130.1| Xenopus laevis cDNA clone IMAGE:5073834
          Length = 1532

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 408 ctgccagagctggaggggtga 428
           |||||||||||||||||||||
Sbjct: 209 ctgccagagctggaggggtga 189



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>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence
          Length = 112873

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2159  ccatatttcatatgttcacag 2179
             |||||||||||||||||||||
Sbjct: 55106 ccatatttcatatgttcacag 55086



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>gb|AC121996.3| Mus musculus BAC clone RP24-312F5 from chromosome 3, complete sequence
          Length = 169912

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 548    gctgacaaggaaattatgaag 568
              |||||||||||||||||||||
Sbjct: 126279 gctgacaaggaaattatgaag 126259



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>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 188300

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1532 ggtaagcatggaacagctgga 1552
            |||||||||||||||||||||
Sbjct: 9589 ggtaagcatggaacagctgga 9609



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>gb|AC023248.20| Mus musculus chromosome 7, clone RP23-124B2, complete sequence
          Length = 211123

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2080   tatatatatcaagaagaaactacac 2104
              ||||||||| |||||||||||||||
Sbjct: 119365 tatatatataaagaagaaactacac 119341



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>dbj|AP001916.1| Mus musculus genomic DNA, chromosome 7, clone:B131C, complete sequence
          Length = 40333

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2080  tatatatatcaagaagaaactacac 2104
             ||||||||| |||||||||||||||
Sbjct: 21112 tatatatataaagaagaaactacac 21088



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>gb|AC104296.4| Mus Musculus Strain 129S6/SvEvTac chromosome 2 BAC, RP22-161J17,
             complete sequence
          Length = 161984

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    gaacacatatacatacacata 44
             |||||||||||||||||||||
Sbjct: 61795 gaacacatatacatacacata 61815



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>ref|XM_626772.1| Cryptosporidium parvum Iowa II putative choline kinase (cgd3_2030),
            partial mRNA
          Length = 1218

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 2261 ttcatatttaaatttgaaata 2281
            |||||||||||||||||||||
Sbjct: 909  ttcatatttaaatttgaaata 889



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>ref|XM_663590.1| Cryptosporidium hominis TU502 choline kinase GmCK2p-like protein
            (Chro.30240) partial mRNA
          Length = 1203

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 2261 ttcatatttaaatttgaaata 2281
            |||||||||||||||||||||
Sbjct: 894  ttcatatttaaatttgaaata 874



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>gb|AC104113.3| Homo sapiens chromosome 5 clone RP11-231G3, complete sequence
          Length = 105743

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    acacatatacatacacatagt 46
             |||||||||||||||||||||
Sbjct: 15701 acacatatacatacacatagt 15721



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>ref|NM_175211.2| Mus musculus Ral GEF with PH domain and SH3 binding motif 1
            (Ralgps1), mRNA
 dbj|AK076767.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930441N24 product:similar to RAL GUANINE
            NUCLEOTIDE EXCHANGE FACTOR RALGPS1A [Homo sapiens], full
            insert sequence
          Length = 2740

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 347  gagaaggccaagcacctgctggacg 371
            |||||||||| ||||||||||||||
Sbjct: 1364 gagaaggccaggcacctgctggacg 1388



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 635     tcgcccttgtacctggcagtctcactggg 663
               ||||| ||||||||||| |||||||||||
Sbjct: 4911698 tcgccgttgtacctggcggtctcactggg 4911726



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 2264    atatttaaatttgaaataaat 2284
               |||||||||||||||||||||
Sbjct: 3822978 atatttaaatttgaaataaat 3822958



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>gb|AC108099.2| Homo sapiens chromosome 5 clone RP11-112L7, complete sequence
          Length = 172945

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2249  atacacgtgagtttcatatttaaat 2273
             |||||||||||||| ||||||||||
Sbjct: 41032 atacacgtgagtttaatatttaaat 41008



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>gb|AC079301.6| Homo sapiens BAC clone RP11-184F13 from 4, complete sequence
          Length = 153736

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2265   tatttaaatttgaaataaatt 2285
              |||||||||||||||||||||
Sbjct: 142626 tatttaaatttgaaataaatt 142646



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>gb|AC024243.8| Homo sapiens BAC clone RP11-528I4 from 4, complete sequence
          Length = 163857

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 952   acatgtggcagcaatgagaag 972
             |||||||||||||||||||||
Sbjct: 49214 acatgtggcagcaatgagaag 49234



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>gb|AC022445.6| Homo sapiens chromosome 5 clone RP11-489L13, complete sequence
          Length = 180807

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     acacatatacatacacatagt 46
              |||||||||||||||||||||
Sbjct: 154803 acacatatacatacacatagt 154823



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>emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0080E14,
             complete sequence
          Length = 148064

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2264  atatttaaatttgaaataaat 2284
             |||||||||||||||||||||
Sbjct: 49959 atatttaaatttgaaataaat 49939



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>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project)
          Length = 110992

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1694  ttcatcatctccatcgtctttgtct 1718
             ||||||||||||||| |||||||||
Sbjct: 54605 ttcatcatctccatcttctttgtct 54581



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>emb|AL645842.15| Mouse DNA sequence from clone RP23-20A9 on chromosome 11 Contains two
              novel genes and the 3' end of the Accn1 gene for neuronal
              amiloride-sensitive cation channel 1 (degenerin), complete
              sequence
          Length = 114190

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     gagaacacatatacatacaca 42
              |||||||||||||||||||||
Sbjct: 101637 gagaacacatatacatacaca 101617



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>gb|AC007317.3| Homo sapiens BAC clone RP11-414K7 from 2, complete sequence
          Length = 200709

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 2265 tatttaaatttgaaataaatt 2285
            |||||||||||||||||||||
Sbjct: 6576 tatttaaatttgaaataaatt 6556



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>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone
              BACR33N15, complete sequence
          Length = 187701

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2151   tgtatattccatatttcatat 2171
              |||||||||||||||||||||
Sbjct: 154891 tgtatattccatatttcatat 154911



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>gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, complete sequence
          Length = 219399

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    gagaacacatatacatacaca 42
             |||||||||||||||||||||
Sbjct: 27597 gagaacacatatacatacaca 27577



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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1585   cgcgttcatcatcgccaacac 1605
              |||||||||||||||||||||
Sbjct: 462587 cgcgttcatcatcgccaacac 462567



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>gb|AY213194.1| Homo sapiens Cockayne syndrome 1 (classical) (CKN1) gene, complete cds
          Length = 74023

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    acacatatacatacacatagt 46
             |||||||||||||||||||||
Sbjct: 62523 acacatatacatacacatagt 62543



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>gb|AC137551.1| Homo sapiens chromosome 5 clone RP11-867C24, complete sequence
          Length = 183535

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2249   atacacgtgagtttcatatttaaat 2273
              |||||||||||||| ||||||||||
Sbjct: 134813 atacacgtgagtttaatatttaaat 134789



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>emb|AL672306.11| Mouse DNA sequence from clone RP23-149O3 on chromosome X, complete
             sequence
          Length = 211871

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 710   tcctactctggaccacatgga 730
             |||||||||||||||||||||
Sbjct: 52252 tcctactctggaccacatgga 52232



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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 1185    ttttctatcttctaattcagaaccc 1209
               |||| ||||||||||||||||||||
Sbjct: 2130267 ttttttatcttctaattcagaaccc 2130291



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>gb|AC126692.4| Mus musculus BAC clone RP23-246J18 from 6, complete sequence
          Length = 195236

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1532   ggtaagcatggaacagctgga 1552
              |||||||||||||||||||||
Sbjct: 116133 ggtaagcatggaacagctgga 116153



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>gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complete sequence
          Length = 169769

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     gaacacatatacatacacata 44
              |||||||||||||||||||||
Sbjct: 105889 gaacacatatacatacacata 105909



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>emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chromosome 2, complete
             sequence
          Length = 46845

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 347   gagaaggccaagcacctgctggacg 371
             |||||||||| ||||||||||||||
Sbjct: 30081 gagaaggccaggcacctgctggacg 30057



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>emb|AJ271885.2|MMU271885 Mus musculus partial Kcnq1 gene for potassium channel protein and
             associated 187740 bp genomic fragment
          Length = 187740

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2080  tatatatatcaagaagaaactacac 2104
             ||||||||| |||||||||||||||
Sbjct: 30761 tatatatataaagaagaaactacac 30737



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>gb|AC171738.2| Monodelphis domestica clone VMRC6-66F14 map human ortholog 4q31.21,
             complete sequence
          Length = 142956

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1817  gtagcccctttcctttttctc 1837
             |||||||||||||||||||||
Sbjct: 38887 gtagcccctttcctttttctc 38907



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>dbj|AP001293.1| Mus musculus genomic DNA, chromosome 7, clone:B131, complete sequence
          Length = 108333

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2080  tatatatatcaagaagaaactacac 2104
             ||||||||| |||||||||||||||
Sbjct: 89112 tatatatataaagaagaaactacac 89088



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>emb|AL844481.5| Mouse DNA sequence from clone RP23-44H23 on chromosome 2, complete
             sequence
          Length = 109532

 Score = 42.1 bits (21), Expect = 9.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    gaacacatatacatacacata 44
             |||||||||||||||||||||
Sbjct: 45594 gaacacatatacatacacata 45614


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 426,831,750
Number of extensions: 22248021
Number of successful extensions: 175619
Number of sequences better than 10.0: 62
Number of HSP's gapped: 175619
Number of HSP's successfully gapped: 63
Length of query: 2352
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2329
Effective length of database: 18,503,978,556
Effective search space: 43095766056924
Effective search space used: 43095766056924
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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