ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf148h14 |
|---|---|
| Clone Library Name | barley_pub |
>Q86YJ5:MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 - Homo sapiens (Human)| Length = 346 Score = 57.0 bits (136), Expect = 2e-07 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Frame = +1 Query: 265 GLANTKDDGVAEKPSEAVLV---AAVDMVEDGGEDEPLIPAAECRICQEEDSIKNLEKPC 435 GLA K+ P A + A+D + + + +CRIC + L PC Sbjct: 67 GLAGDKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPC 126 Query: 436 TCNGSLKYAHRACVQRWCNEKGDITCEICHEQYK 537 C+GS++ H+ C+ RW +E+G +CE+C+ +Y+ Sbjct: 127 RCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160
>Q3TZ87:MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 - Mus musculus (Mouse)| Length = 348 Score = 56.2 bits (134), Expect = 3e-07 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Frame = +1 Query: 265 GLANTKDDGVAEKPSEAVLV---AAVDMVEDGGEDEPLIPAAECRICQEEDSIKNLEKPC 435 GLA K+ P A A+D + + + +CRIC + L PC Sbjct: 67 GLAGDKEPRAGPPPPPAPPPPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPC 126 Query: 436 TCNGSLKYAHRACVQRWCNEKGDITCEICHEQYK 537 C+GS++ H+ C+ RW +E+G +CE+C+ +Y+ Sbjct: 127 RCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQ 160
>Q9P2E8:MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 precursor - Homo sapiens (Human)| Length = 410 Score = 55.1 bits (131), Expect = 7e-07 Identities = 32/116 (27%), Positives = 52/116 (44%) Frame = +1 Query: 187 LPPSPARSSIC*GEFWMGDHVVVNVDGLANTKDDGVAEKPSEAVLVAAVDMVEDGGEDEP 366 +PP P + W G L++ D ++ +E + D G P Sbjct: 104 VPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSL--DSGMRTP 161 Query: 367 LIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 L CRIC + L PC C+GS+K H+ C+ +W +E+G +CE+C+ +Y Sbjct: 162 L-----CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 212
>Q0P496:MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 precursor - Danio rerio| (Zebrafish) (Brachydanio rerio) Length = 421 Score = 55.1 bits (131), Expect = 7e-07 Identities = 27/88 (30%), Positives = 47/88 (53%) Frame = +1 Query: 274 NTKDDGVAEKPSEAVLVAAVDMVEDGGEDEPLIPAAECRICQEEDSIKNLEKPCTCNGSL 453 ++ +D EK E + +++ D G PL CRIC + L PC C+GS+ Sbjct: 114 SSSEDCSKEKLDERL---SLNSCTDSGVRTPL-----CRICFQGPEQGELLSPCRCSGSV 165 Query: 454 KYAHRACVQRWCNEKGDITCEICHEQYK 537 + H C+ +W +E+G +CE+C+ +Y+ Sbjct: 166 RCTHEPCLIKWISERGSWSCELCYYKYQ 193
>Q5I0I2:MARH2_RAT E3 ubiquitin-protein ligase MARCH2 - Rattus norvegicus (Rat)| Length = 246 Score = 55.1 bits (131), Expect = 7e-07 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + +NL PC C G+L H++C+++W + CE+CH ++ Sbjct: 64 CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>Q99M02:MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 - Mus musculus (Mouse)| Length = 246 Score = 55.1 bits (131), Expect = 7e-07 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + +NL PC C G+L H++C+++W + CE+CH ++ Sbjct: 64 CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>Q5XIE5:MARH3_RAT E3 ubiquitin-protein ligase MARCH3 - Rattus norvegicus (Rat)| Length = 253 Score = 54.7 bits (130), Expect = 9e-07 Identities = 20/50 (40%), Positives = 30/50 (60%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E S ++L PC C G+L HR+C++ W + CE+CH ++ Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
>Q8BRX9:MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 - Mus musculus (Mouse)| Length = 218 Score = 54.7 bits (130), Expect = 9e-07 Identities = 20/50 (40%), Positives = 30/50 (60%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E S ++L PC C G+L HR+C++ W + CE+CH ++ Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
>Q86UD3:MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 - Homo sapiens (Human)| Length = 253 Score = 54.7 bits (130), Expect = 9e-07 Identities = 20/50 (40%), Positives = 30/50 (60%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E S ++L PC C G+L HR+C++ W + CE+CH ++ Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
>A0JN69:MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 - Bos taurus (Bovine)| Length = 253 Score = 54.7 bits (130), Expect = 9e-07 Identities = 20/50 (40%), Positives = 30/50 (60%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E S ++L PC C G+L HR+C++ W + CE+CH ++ Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF 120
>Q32L65:MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 - Bos taurus (Bovine)| Length = 245 Score = 54.7 bits (130), Expect = 9e-07 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + ++L PC C+G+L H++C++RW + CE+CH ++ Sbjct: 64 CRICHEGANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEF 113
>Q80TE3:MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 precursor - Mus musculus (Mouse)| Length = 409 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = +1 Query: 346 DGGEDEPLIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICH 525 D G PL CRIC + L PC C+GS+K H+ C+ +W +E+G +CE+C+ Sbjct: 154 DSGMRTPL-----CRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCY 208 Query: 526 EQY 534 +Y Sbjct: 209 YKY 211
>Q68FA7:MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 251 Score = 54.3 bits (129), Expect = 1e-06 Identities = 25/92 (27%), Positives = 42/92 (45%) Frame = +1 Query: 292 VAEKPSEAVLVAAVDMVEDGGEDEPLIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRA 471 V+ K + + + D P+ CRIC E + ++L PC C G+L HR+ Sbjct: 43 VSAKDGQLLSTVVRTLTTQSFNDRPM-----CRICHEGSTQEDLLSPCECTGTLGTIHRS 97 Query: 472 CVQRWCNEKGDITCEICHEQYKPGYTAPPRVQ 567 C++ W + CE+CH ++ P V+ Sbjct: 98 CLEHWLSSSNTSYCELCHFRFSVERKPRPLVE 129
>Q0IH10:MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 - Xenopus laevis (African clawed| frog) Length = 252 Score = 53.9 bits (128), Expect = 1e-06 Identities = 21/61 (34%), Positives = 33/61 (54%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQYKPGYTAPPRV 564 CRIC E + ++L PC C G+L HR+C++ W + CE+CH ++ P V Sbjct: 70 CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFSVERKPRPLV 129 Query: 565 Q 567 + Sbjct: 130 E 130
>Q28EX7:MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 246 Score = 53.1 bits (126), Expect = 3e-06 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + + L PC C G+L H+ C+++W + CE+CH ++ Sbjct: 64 CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEF 113
>Q5PQ35:MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 - Xenopus laevis (African clawed| frog) Length = 246 Score = 53.1 bits (126), Expect = 3e-06 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + + L PC C G+L H+ C+++W + CE+CH ++ Sbjct: 64 CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEF 113
>Q5XI50:MARH7_RAT E3 ubiquitin-protein ligase MARCH7 - Rattus norvegicus (Rat)| Length = 692 Score = 52.4 bits (124), Expect = 4e-06 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 20/117 (17%) Frame = +1 Query: 241 DHVVVNVDGLAN--TKDDGVAEK--------PSEAVLVAAVDMVEDGGEDEPLIPAAECR 390 D+V + VD + + + DG +EK P + + ++ED E+E CR Sbjct: 498 DNVTITVDIIPSGWSSADGKSEKAKSAPSRDPEKLQKIKESLLLEDSDEEEE---GDLCR 554 Query: 391 ICQ--EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK--------GDITCEICHEQ 531 ICQ S L +PC C GSL+Y H+ C+++W K TCE+C E+ Sbjct: 555 ICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEK 611
>Q1LVZ2:MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 249 Score = 52.4 bits (124), Expect = 4e-06 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Frame = +1 Query: 385 CRICQEEDSIKNLE---KPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + N E PC C G+L H++C+++W + CE+CH ++ Sbjct: 64 CRICHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEF 116
>Q9P0N8:MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 - Homo sapiens (Human)| Length = 246 Score = 51.6 bits (122), Expect = 7e-06 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E + + L PC C G+L H++C+++W + CE+CH ++ Sbjct: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>P40318:SSM4_YEAST E3 ubiquitin-protein ligase Doa10 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1319 Score = 51.2 bits (121), Expect = 1e-05 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%) Frame = +1 Query: 379 AECRICQEEDSIKN-LEKPCTCNGSLKYAHRACVQRWCNEK--------GDITCEICH 525 A CRIC+ E + N L PC C GS+KY H +C+ W K D+ C+ICH Sbjct: 37 ATCRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCDICH 94
>Q5R9W2:MARH7_PONPY E3 ubiquitin-protein ligase MARCH7 - Pongo pygmaeus (Orangutan)| Length = 707 Score = 50.8 bits (120), Expect = 1e-05 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%) Frame = +1 Query: 256 NVDGLANTKDDGVAEKPSEAVLVAAVDMVEDGGEDEPLIPAAECRICQ--EEDSIKNLEK 429 + DG ++ + P + ++ED E+E + CRICQ S L + Sbjct: 513 SADGKSDKTKSAPSRDPERLQKIKESLLLEDSEEEEGDL----CRICQMAAASSSNLLIE 568 Query: 430 PCTCNGSLKYAHRACVQRWCNEK--------GDITCEICHEQ 531 PC C GSL+Y H+ C+++W K TCE+C E+ Sbjct: 569 PCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEK 610
>Q9H992:MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 - Homo sapiens (Human)| Length = 704 Score = 50.8 bits (120), Expect = 1e-05 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%) Frame = +1 Query: 256 NVDGLANTKDDGVAEKPSEAVLVAAVDMVEDGGEDEPLIPAAECRICQ--EEDSIKNLEK 429 + DG ++ + P + ++ED E+E + CRICQ S L + Sbjct: 513 SADGKSDKTKSAPSRDPERLQKIKESLLLEDSEEEEGDL----CRICQMAAASSSNLLIE 568 Query: 430 PCTCNGSLKYAHRACVQRWCNEK--------GDITCEICHEQ 531 PC C GSL+Y H+ C+++W K TCE+C E+ Sbjct: 569 PCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEK 610
>Q6NYK8:MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 289 Score = 50.4 bits (119), Expect = 2e-05 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%) Frame = +1 Query: 358 DEPLIPAAECRIC---QEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK------GDIT 510 DEP P C +C ++ED PC C G K+ H++C+QRW +EK G ++ Sbjct: 5 DEP--PEKHCWVCFATEKEDRAAEWVSPCRCKGCTKWIHQSCLQRWLDEKQKGNSGGAVS 62 Query: 511 CEICHEQYK 537 C C +Y+ Sbjct: 63 CPQCGTEYR 71
>Q9DBD2:MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 - Mus musculus (Mouse)| Length = 286 Score = 50.1 bits (118), Expect = 2e-05 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E D L PC C GSL + H+AC+Q+W CE+C ++ Sbjct: 76 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 126
>Q5T0T0:MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 - Homo sapiens (Human)| Length = 291 Score = 50.1 bits (118), Expect = 2e-05 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E D L PC C GSL + H+AC+Q+W CE+C ++ Sbjct: 80 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
>Q9WV66:MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 - Mus musculus (Mouse)| Length = 693 Score = 50.1 bits (118), Expect = 2e-05 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 20/119 (16%) Frame = +1 Query: 235 MGDHVVVNVDGLAN--TKDDGVAEK--------PSEAVLVAAVDMVEDGGEDEPLIPAAE 384 + D+V++ VD + + DG +K P + + ++ED ++E Sbjct: 497 LADNVMITVDIIPSGWNSTDGKNDKAKSAPSRDPEKLQKIKESLLLEDSDDEEE---GDL 553 Query: 385 CRICQ--EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK--------GDITCEICHEQ 531 CRICQ S L +PC C GSL+Y H+ C+++W K TCE+C E+ Sbjct: 554 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEK 612
>Q28IK8:MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 264 Score = 49.7 bits (117), Expect = 3e-05 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E D L PC C GSL + H+AC+Q+W CE+C ++ Sbjct: 53 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103
>Q5XH39:MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 - Xenopus laevis (African clawed| frog) Length = 264 Score = 49.7 bits (117), Expect = 3e-05 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E D L PC C GSL + H+AC+Q+W CE+C ++ Sbjct: 53 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103
>Q20977:STATB_CAEEL Signal transducer and activator of transcription b - Caenorhabditis| elegans Length = 966 Score = 49.3 bits (116), Expect = 4e-05 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRICQ + ++ +PC C G++ H C+ +W N TCEIC +Y Sbjct: 52 CRICQMHEG--DMVRPCDCAGTMGDVHEECLTKWVNMSNKKTCEICKSEY 99
>Q0VD59:MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 - Bos taurus (Bovine)| Length = 289 Score = 48.9 bits (115), Expect = 5e-05 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CRIC E D L PC C GSL + H+ C+Q+W CE+C ++ Sbjct: 78 CRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEF 128
>Q6GM44:MARH5_XENLA E3 ubiquitin-protein ligase MARCH5 - Xenopus laevis (African clawed| frog) Length = 283 Score = 48.1 bits (113), Expect = 8e-05 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK------GDITCEICHEQY 534 C E+D +PC C GS K+ H+AC+QRW +EK + C C+ +Y Sbjct: 20 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 75
>Q3KNM2:MARH5_MOUSE E3 ubiquitin-protein ligase MARCH5 - Mus musculus (Mouse)| Length = 278 Score = 48.1 bits (113), Expect = 8e-05 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK------GDITCEICHEQY 534 C E+D +PC C GS K+ H+AC+QRW +EK + C C+ +Y Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>Q9NX47:MARH5_HUMAN E3 ubiquitin-protein ligase MARCH5 - Homo sapiens (Human)| Length = 278 Score = 48.1 bits (113), Expect = 8e-05 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK------GDITCEICHEQY 534 C E+D +PC C GS K+ H+AC+QRW +EK + C C+ +Y Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>Q0X0A5:MARH5_CERAE E3 ubiquitin-protein ligase MARCH5 - Cercopithecus aethiops (Green| monkey) (Grivet) Length = 278 Score = 48.1 bits (113), Expect = 8e-05 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK------GDITCEICHEQY 534 C E+D +PC C GS K+ H+AC+QRW +EK + C C+ +Y Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>Q3ZC24:MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5 - Bos taurus (Bovine)| Length = 278 Score = 48.1 bits (113), Expect = 8e-05 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK------GDITCEICHEQY 534 C E+D +PC C GS K+ H+AC+QRW +EK + C C+ +Y Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>Q5R9W1:MARH6_PONPY E3 ubiquitin-protein ligase MARCH6 - Pongo pygmaeus (Orangutan)| Length = 910 Score = 47.8 bits (112), Expect = 1e-04 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQEEDSI-KNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CR+C+ E + K L PC C GS+K+ H+ C+ +W CE+C ++ Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF 59
>Q6ZQ89:MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 - Mus musculus (Mouse)| Length = 909 Score = 47.8 bits (112), Expect = 1e-04 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQEEDSI-KNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CR+C+ E + K L PC C GS+K+ H+ C+ +W CE+C ++ Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF 59
>O60337:MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 - Homo sapiens (Human)| Length = 910 Score = 47.8 bits (112), Expect = 1e-04 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +1 Query: 385 CRICQEEDSI-KNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 CR+C+ E + K L PC C GS+K+ H+ C+ +W CE+C ++ Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF 59
>Q5ZJ41:MARH5_CHICK E3 ubiquitin-protein ligase MARCH5 - Gallus gallus (Chicken)| Length = 281 Score = 47.8 bits (112), Expect = 1e-04 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%) Frame = +1 Query: 337 MVEDGGEDEPLIPAAECRIC---QEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEK--- 498 M E G P C +C E+D +PC C GS K+ H+ C+QRW +EK Sbjct: 1 MSEQTGLALPQTMDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQTCLQRWVDEKQRG 60 Query: 499 ---GDITCEICHEQY 534 + C C+ +Y Sbjct: 61 NSTARVACPQCNAEY 75
>Q6NZQ8:MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 - Mus musculus (Mouse)| Length = 289 Score = 46.6 bits (109), Expect = 2e-04 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEIC 522 CRIC E D L PC C G+L++ H++C+ +W CE+C Sbjct: 80 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 126
>Q8TCQ1:MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 - Homo sapiens (Human)| Length = 289 Score = 46.6 bits (109), Expect = 2e-04 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 385 CRICQ-EEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEIC 522 CRIC E D L PC C G+L++ H++C+ +W CE+C Sbjct: 80 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 126
>P27426:VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 - Bovine herpesvirus 4| (strain DN-599) (BoHV-4) (Movar virus) Length = 285 Score = 46.2 bits (108), Expect = 3e-04 Identities = 17/52 (32%), Positives = 29/52 (55%) Frame = +1 Query: 382 ECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQYK 537 +C IC++ +S+ + C C G L+Y H C++ W + G+ C+ C YK Sbjct: 131 QCWICRDGESLPEA-RYCNCYGDLQYCHEECLKTWISMSGEKKCKFCQTPYK 181
>Q5XIV2:RN190_RAT Probable E3 ubiquitin-protein ligase RNF190 - Rattus norvegicus| (Rat) Length = 790 Score = 44.3 bits (103), Expect = 0.001 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%) Frame = +1 Query: 253 VNVDGLANTKDDGVAEKPSEAVLVAAVDMVEDGGEDEPLIPAAECRICQEEDS--IKNLE 426 V V G+ + K + P + + + ED E+ L CRICQ L Sbjct: 602 VRVSGVMDEKATEIKADPEKLRKLQESLLEEDSEEEGDL-----CRICQIAGGSPANPLL 656 Query: 427 KPCTCNGSLKYAHRACVQRWCNEK----GDI----TCEICHE 528 +PC C GSL++ H+ C+++W K D+ TCE+C + Sbjct: 657 EPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMCKQ 698
>Q8NA82:RN190_HUMAN Probable E3 ubiquitin-protein ligase RNF190 - Homo sapiens (Human)| Length = 808 Score = 43.1 bits (100), Expect = 0.003 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 10/98 (10%) Frame = +1 Query: 265 GLANTKDDGVAEKPSEAVLVAAVDMVEDGGEDEPLIPAAECRICQEEDSIKN--LEKPCT 438 G + K+ + E + ++E+ E+E + CRICQ + L +PC Sbjct: 623 GFTDEKETSKIKADPEKLKKLQESLLEEDSEEEGDL----CRICQIAGGSPSNPLLEPCG 678 Query: 439 CNGSLKYAHRACVQRWCNEK----GDI----TCEICHE 528 C GSL++ H+ C+++W K D+ TCE+C + Sbjct: 679 CVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
>P90489:MIR2_HHV8 E3 ubiquitin-protein ligase MIR2 - Human herpesvirus 8 (HHV-8)| (Kaposi's sarcoma-associated herpesvirus) Length = 256 Score = 40.4 bits (93), Expect = 0.017 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQYK 537 C IC+EE + + PC C G L H C+ W + C++C Y+ Sbjct: 15 CWICREEVGNEGIH-PCACTGELDVVHPQCLSTWLTVSRNTACQMCRVIYR 64
>P32225:VC07_SWPVK Probable E3 ubiquitin-protein ligase C7 - Swinepox virus (strain| Kasza) (SWPV) Length = 155 Score = 40.0 bits (92), Expect = 0.022 Identities = 14/50 (28%), Positives = 29/50 (58%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 C IC+++ SI+ + C C K H C+++W + +C++C+++Y Sbjct: 5 CWICKDDYSIE--KNYCNCKNEYKVVHDECMKKWIQYSRERSCKLCNKEY 52
>P90495:MIR1_HHV8 E3 ubiquitin-protein ligase MIR1 - Human herpesvirus 8 (HHV-8)| (Kaposi's sarcoma-associated herpesvirus) Length = 333 Score = 39.7 bits (91), Expect = 0.029 Identities = 20/60 (33%), Positives = 28/60 (46%) Frame = +1 Query: 355 EDEPLIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQY 534 ED P+ C IC EE + + C C G L+ HR+C+ W + C+IC Y Sbjct: 4 EDVPV-----CWICNEELGNERF-RACGCTGELENVHRSCLSTWLTISRNTACQICGVVY 57
>O41933:MIR1_MHV68 E3 ubiquitin-protein ligase MIR1 - Murid herpesvirus 4 (MuHV-4)| (Murine gammaherpesvirus 68) Length = 201 Score = 36.2 bits (82), Expect = 0.32 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQYKPGYTAPP 558 C IC + + L++ C C GS +H+ C++ W TC +C Y + P Sbjct: 8 CWICHQPEG--PLKRFCGCKGSCAVSHQDCLRGWLETSRRQTCALCGTPYSMKWKTKP 63
>Q687E1:NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase - Hordeum vulgare| (Barley) Length = 368 Score = 33.1 bits (74), Expect = 2.7 Identities = 20/44 (45%), Positives = 28/44 (63%) Frame = -3 Query: 299 SATPSSLVFAKPSTFTTTWSPIQNSPQQIELLAGDGGNVEDDCS 168 +A+ S+V+AKP TF +P QNS Q+I ++ GD G E D S Sbjct: 17 TASDGSVVWAKPYTFRAPPTPGQNSLQRI-IVFGDMGKAERDGS 59
>P32302:CXCR5_HUMAN C-X-C chemokine receptor type 5 - Homo sapiens (Human)| Length = 372 Score = 33.1 bits (74), Expect = 2.7 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +1 Query: 829 SLFLLRAAGFLLPCYIMAWIF-SILHRRRQ 915 S FL AGFLLP +M W + ++HR RQ Sbjct: 218 SRFLYHVAGFLLPMLVMGWCYVGVVHRLRQ 247
>Q7YR32:TRI10_PANTR Tripartite motif-containing protein 10 - Pan troglodytes| (Chimpanzee) Length = 481 Score = 32.7 bits (73), Expect = 3.6 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Frame = +1 Query: 367 LIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKG-----DITCEICHEQ 531 L C ICQ L +P T + + RAC+ R+C G TC +C E Sbjct: 10 LADEVNCPICQG-----TLREPVTIDCGHNFC-RACLTRYCEIPGPDLEESPTCPLCKEP 63 Query: 532 YKPGYTAP 555 ++PG P Sbjct: 64 FRPGSFRP 71
>Q9UDY6:TRI10_HUMAN Tripartite motif-containing protein 10 - Homo sapiens (Human)| Length = 481 Score = 32.7 bits (73), Expect = 3.6 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Frame = +1 Query: 367 LIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKG-----DITCEICHEQ 531 L C ICQ L +P T + + RAC+ R+C G TC +C E Sbjct: 10 LADEVNCPICQG-----TLREPVTIDCGHNFC-RACLTRYCEIPGPDLEESPTCPLCKEP 63 Query: 532 YKPGYTAP 555 ++PG P Sbjct: 64 FRPGSFRP 71
>P15362:P69_MYCHR ABC transport system permease protein p69 - Mycoplasma hyorhinis| Length = 580 Score = 32.3 bits (72), Expect = 4.6 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -3 Query: 158 IRWTKSRNVLLLSNAQFVGVGLLVKSTRDFSLGFA 54 IRWT +++ A +G+GLL+ RDFSLG++ Sbjct: 216 IRWTT-----IINAAGVIGIGLLLNDARDFSLGWS 245
>Q867Z4:LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T - Drosophila| melanogaster (Fruit fly) Length = 970 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = -1 Query: 811 HHLLHCPRSTMHVSEATEPLE*VQQNGRMQHHLHQYHRIRRTLLQEDDAVQLLQQEFLG 635 HH+ T H+ + +G+ QH Q+H+ LQ+DD V+ + E LG Sbjct: 802 HHIHAGQLQTHHIQTVVQ-----SSSGQQQHDQQQHHQHHSIELQDDDGVETITPEELG 855
>P34997:CXCR5_RAT C-X-C chemokine receptor type 5 - Rattus norvegicus (Rat)| Length = 374 Score = 32.3 bits (72), Expect = 4.7 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Frame = +1 Query: 787 ISDNEGDDDASTMF-SLFLLRAAGFLLPCYIMAWIF-SILH------RRRQNEEAASIAT 942 I E + + F S FL GFLLP +MAW + ++H RR Q ++A +A Sbjct: 205 IFSQENEAETRAWFASRFLYHTGGFLLPMLVMAWCYVGVVHRLLQAQRRPQRQKAVRVAI 264 Query: 943 AEVAFIL 963 + L Sbjct: 265 LVTSIFL 271
>Q63364:PJA2_RAT E3 ubiquitin-protein ligase Praja2 - Rattus norvegicus (Rat)| Length = 707 Score = 32.0 bits (71), Expect = 6.1 Identities = 17/70 (24%), Positives = 27/70 (38%) Frame = +1 Query: 385 CRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQYKPGYTAPPRV 564 C IC E ++ C+ + H+ CV W + G TC +C + P Sbjct: 633 CPICCSEYIKDDIATELPCH---HFFHKPCVSIWLQKSG--TCPVCRRHFPPAVIDASAA 687 Query: 565 QPDETNIDIS 594 E ++D S Sbjct: 688 ASSEPDLDAS 697
>Q9WUH5:TRI10_MOUSE Tripartite motif-containing protein 10 - Mus musculus (Mouse)| Length = 489 Score = 31.6 bits (70), Expect = 7.9 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Frame = +1 Query: 367 LIPAAECRICQEEDSIKNLEKPCTCNGSLKYAHRACVQRWCNEKG-----DITCEICHEQ 531 L C ICQ L +P T + + R C+ R+C G ++C +C E Sbjct: 10 LADEVNCPICQG-----TLREPVTIDCGHNFC-RGCLTRYCEIPGPESEESLSCPLCKEP 63 Query: 532 YKPGYTAP 555 ++PG P Sbjct: 64 FRPGSFRP 71
>Q9SUS5:RHA1B_ARATH RING-H2 zinc finger protein RHA1b - Arabidopsis thaliana (Mouse-ear| cress) Length = 157 Score = 31.6 bits (70), Expect = 7.9 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = +1 Query: 385 CRICQEE----DSIKNLEKPCTCNGSLKYAHRACVQRWCNEKGDITCEICHEQYKPGYTA 552 C +C + D I+ L K C H C+ RW + ITC IC ++ P + Sbjct: 85 CTVCLSDFVSDDKIRQLPK---CGHVF---HHRCLDRWIVDCNKITCPICRNRFLPEEKS 138 Query: 553 PP 558 P Sbjct: 139 TP 140 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 237,739,315 Number of extensions: 5427183 Number of successful extensions: 16440 Number of sequences better than 10.0: 58 Number of HSP's gapped: 16426 Number of HSP's successfully gapped: 58 Length of query: 447 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 331 Effective length of database: 68,868,219 Effective search space: 22795380489 Effective search space used: 22795380489 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
