ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf140k04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111407:Os06g0273800 | 338 | 2e-93 | 2 | AK106215:Os06g0273800 | 338 | 2e-93 | 3 | AK102635:Os06g0273800 | 338 | 2e-93 | 4 | AK058911:Os06g0273800 | 338 | 2e-93 | 5 | AK071238:Os05g0297900 | 336 | 1e-92 | 6 | AK099911:Os02g0827900 | 231 | 4e-61 | 7 | Os06g0729500:Os06g0729500 | 29 | 4.8 | 8 | Os01g0928700:Os01g0928700 | 28 | 6.3 | 9 | Os12g0621000:Os12g0621000 | 28 | 6.3 | 10 | AK072311:Os04g0527800 | 28 | 6.3 | 11 | AK072798:Os12g0257000 | 28 | 8.2 | 12 | AK064874:Os12g0257000 | 28 | 8.2 | 13 | AK111161: | 28 | 8.2 |
|---|
>AK111407:Os06g0273800 | Length = 180 Score = 338 bits (868), Expect = 2e-93 Identities = 168/180 (93%), Positives = 175/180 (97%) Frame = +1 Query: 112 MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 291 MGFIGD +ESIRSMQVRQVL QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 292 GFKRGDILFLHMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNF 471 GFKRGDILFLHMS+DPIRTGEIVVFN+DGREIPIVHRVIKVHERQES EVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 472 GDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKPIIKYLLIGALGLLVITSKE Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK106215:Os06g0273800 | Length = 180 Score = 338 bits (868), Expect = 2e-93 Identities = 168/180 (93%), Positives = 175/180 (97%) Frame = +1 Query: 112 MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 291 MGFIGD +ESIRSMQVRQVL QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 292 GFKRGDILFLHMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNF 471 GFKRGDILFLHMS+DPIRTGEIVVFN+DGREIPIVHRVIKVHERQES EVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 472 GDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKPIIKYLLIGALGLLVITSKE Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK102635:Os06g0273800 | Length = 180 Score = 338 bits (868), Expect = 2e-93 Identities = 168/180 (93%), Positives = 175/180 (97%) Frame = +1 Query: 112 MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 291 MGFIGD +ESIRSMQVRQVL QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 292 GFKRGDILFLHMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNF 471 GFKRGDILFLHMS+DPIRTGEIVVFN+DGREIPIVHRVIKVHERQES EVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 472 GDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKPIIKYLLIGALGLLVITSKE Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK058911:Os06g0273800 | Length = 180 Score = 338 bits (868), Expect = 2e-93 Identities = 168/180 (93%), Positives = 175/180 (97%) Frame = +1 Query: 112 MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 291 MGFIGD +ESIRSMQVRQVL QIISLGMIVTSALIIWKGL+V TGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTIESIRSMQVRQVLAQIISLGMIVTSALIIWKGLIVVTGSESPVVVVLSGSMEP 60 Query: 292 GFKRGDILFLHMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNF 471 GFKRGDILFLHMS+DPIRTGEIVVFN+DGREIPIVHRVIKVHERQES EVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQESAEVDILTKGDNNF 120 Query: 472 GDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 GDDRLLYA GQLWLQ+HHIMGRAVG+LPYVGWVTI+MTEKPIIKYLLIGALGLLVITSKE Sbjct: 121 GDDRLLYAHGQLWLQQHHIMGRAVGFLPYVGWVTIIMTEKPIIKYLLIGALGLLVITSKE 180
>AK071238:Os05g0297900 | Length = 180 Score = 336 bits (861), Expect = 1e-92 Identities = 167/180 (92%), Positives = 174/180 (96%) Frame = +1 Query: 112 MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 291 MGFIGD VESIRS+Q+RQVL QIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP Sbjct: 1 MGFIGDTVESIRSIQIRQVLAQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEP 60 Query: 292 GFKRGDILFLHMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNF 471 GFKRGDILFLHMS+DPIRTGEIVVFNIDGREIPIVHRVIKVHER+ES EVDILTKGDNNF Sbjct: 61 GFKRGDILFLHMSKDPIRTGEIVVFNIDGREIPIVHRVIKVHEREESAEVDILTKGDNNF 120 Query: 472 GDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 GDDRLLYA GQLWL +HHIMGRAVG+LPYVGWVTI+MTEKP IKYLLIGALGLLVITSKE Sbjct: 121 GDDRLLYAHGQLWLHQHHIMGRAVGFLPYVGWVTIIMTEKPFIKYLLIGALGLLVITSKE 180
>AK099911:Os02g0827900 | Length = 191 Score = 231 bits (590), Expect = 4e-61 Identities = 110/151 (72%), Positives = 133/151 (88%) Frame = +1 Query: 151 MQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLHMS 330 MQ+R L +I+LGM+++SAL+IWKGL++ TGSESP+VVVLS SME GF+RGDILFL MS Sbjct: 1 MQIRHALVHLITLGMVISSALMIWKGLIIMTGSESPLVVVLSESMELGFERGDILFLQMS 60 Query: 331 QDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLW 510 + PIRTG+IVVFN DGREIPIVHRVI+VHER+++ +VD LTKGDNN DDR+LY GQLW Sbjct: 61 KHPIRTGDIVVFN-DGREIPIVHRVIEVHERRDNAQVDFLTKGDNNPMDDRILYTHGQLW 119 Query: 511 LQKHHIMGRAVGYLPYVGWVTIVMTEKPIIK 603 LQ+HHIMGRA+GYLP GWVT+VMTEKP+IK Sbjct: 120 LQQHHIMGRAIGYLPKAGWVTLVMTEKPVIK 150
>Os06g0729500:Os06g0729500 | Length = 1573 Score = 28.9 bits (63), Expect = 4.8 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = +1 Query: 385 IPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLY 492 +PI+ +++ R+ D+ TKGD FG+ L++ Sbjct: 1351 LPILTKLLPQQLRETISSSDLYTKGDQQFGNGELIF 1386
>Os01g0928700:Os01g0928700 | Length = 497 Score = 28.5 bits (62), Expect = 6.3 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +2 Query: 671 AWFDLVVQM*SRAEQVLLRRVPTGRCIFICSYSCL 775 AWFD+V + + + + L R T RC+ + SY+ L Sbjct: 85 AWFDVVERYSNDSNKTLHRTTKTSRCLNLGSYNYL 119
>Os12g0621000:Os12g0621000 | Length = 893 Score = 28.5 bits (62), Expect = 6.3 Identities = 20/62 (32%), Positives = 28/62 (45%) Frame = +1 Query: 313 LFLHMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLY 492 L L + +RT I VFN DG P + V +D L+ + GD+RLL Sbjct: 453 LSLPLPSTTMRTMTITVFNTDGTTGPSPYTVSVPKSGDTKTLIDALSIACSLKGDERLLV 512 Query: 493 AQ 498 A+ Sbjct: 513 AE 514
>AK072311:Os04g0527800 | Length = 338 Score = 28.5 bits (62), Expect = 6.3 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Frame = +1 Query: 250 ESPVVVVLSGSMEPGFKR--------GDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHR 402 + PVV+ L+G E GFKR G IL+L + + R G +VV I G Sbjct: 247 KGPVVMDLAGFTEQGFKRKLAVQTLFGKILYLSELPEFCSRDGSLVVKEIFGVTDEDADS 306 Query: 403 VIKVHERQESGEVDILTK 456 I++H E+ +++ L K Sbjct: 307 -IRIHILSETSDIESLEK 323
>AK072798:Os12g0257000 | Length = 366 Score = 28.1 bits (61), Expect = 8.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 341 IGSWLMCKNRISPLLNPGSMLPERTTTTG 255 IGSWL+C N + + + GSM+ TG Sbjct: 249 IGSWLICTNVLDFIHDAGSMISYHKNLTG 277
>AK064874:Os12g0257000 | Length = 510 Score = 28.1 bits (61), Expect = 8.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 341 IGSWLMCKNRISPLLNPGSMLPERTTTTG 255 IGSWL+C N + + + GSM+ TG Sbjct: 393 IGSWLICTNVLDFIHDAGSMISYHKNLTG 421
>AK111161: | Length = 1076 Score = 28.1 bits (61), Expect = 8.2 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Frame = +1 Query: 304 GDILFLHMSQDPIRTGEIVVFNIDGREIPIV--HRVIKVHERQESGEVDILTKGDNNFGD 477 GD L + QDP+ G+ V I R PI+ +V+ +H+ E+ T FG Sbjct: 998 GDALLRELMQDPLALGDFTVLMISHRFGPILACDKVLLLHKHGEAS-----TGPSYEFGP 1052 Query: 478 DRLLY 492 R L+ Sbjct: 1053 PRDLF 1057 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,425,307 Number of extensions: 545435 Number of successful extensions: 1461 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1460 Number of HSP's successfully gapped: 13 Length of query: 288 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 188 Effective length of database: 11,395,755 Effective search space: 2142401940 Effective search space used: 2142401940 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
