ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf140k04 |
|---|---|
| Clone Library Name | barley_pub |
>Q9R0P6:SC11A_MOUSE Signal peptidase complex catalytic subunit SEC11A - Mus musculus| (Mouse) Length = 179 Score = 214 bits (544), Expect = 5e-55 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +1 Query: 127 DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 306 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 307 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 483 D+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q+ G + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123 Query: 484 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 LY QGQ WL+K ++GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>Q5R9C7:SC11A_PONPY Signal peptidase complex catalytic subunit SEC11A - Pongo pygmaeus| (Orangutan) Length = 179 Score = 213 bits (543), Expect = 6e-55 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +1 Query: 127 DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 306 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 307 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 483 D+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 484 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 LY QGQ WL+K ++GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>P67812:SC11A_HUMAN Signal peptidase complex catalytic subunit SEC11A - Homo sapiens| (Human) Length = 179 Score = 213 bits (543), Expect = 6e-55 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +1 Query: 127 DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 306 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 307 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 483 D+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 484 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 LY QGQ WL+K ++GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>P67811:SC11A_CANFA Signal peptidase complex catalytic subunit SEC11A - Canis| familiaris (Dog) Length = 179 Score = 213 bits (543), Expect = 6e-55 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +1 Query: 127 DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 306 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 307 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 483 D+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 484 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 LY QGQ WL+K ++GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>P67810:SC11A_BOVIN Signal peptidase complex catalytic subunit SEC11A - Bos taurus| (Bovine) Length = 179 Score = 213 bits (543), Expect = 6e-55 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +1 Query: 127 DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 306 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64 Query: 307 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 483 D+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123 Query: 484 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 LY QGQ WL+K ++GRA G++PY+G VTI+M + P KY ++ LGL V+ +E Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179
>P42667:SC11A_RAT Signal peptidase complex catalytic subunit SEC11A - Rattus| norvegicus (Rat) Length = 179 Score = 211 bits (536), Expect = 4e-54 Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%) Frame = +1 Query: 127 DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 306 D ++ +R M RQ+ Q+++ GMIV+SAL+IWKGLM+ TGSESP+VVVLSGSMEP F RG Sbjct: 5 DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMLITGSESPIVVVLSGSMEPAFHRG 64 Query: 307 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 483 D+LFL + +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q+ G + LTKGDNN DDR Sbjct: 65 DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123 Query: 484 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 LY QGQ WL+K ++GRA G++PY+G VTI+M + P Y ++ LGL V+ +E Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFSYAVLFLLGLFVLVHRE 179
>P13679:SC11C_CANFA Signal peptidase complex catalytic subunit SEC11C - Canis| familiaris (Dog) Length = 192 Score = 210 bits (534), Expect = 7e-54 Identities = 107/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = +1 Query: 91 GREIPAE-MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 267 G +PA + GD +R M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VV Sbjct: 8 GTHLPASGLDIFGD----LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 63 Query: 268 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 444 VLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ Sbjct: 64 VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 122 Query: 445 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 624 LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG VTI+M + P KY L+ + Sbjct: 123 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 182 Query: 625 GLLVITSKE 651 G V+ +E Sbjct: 183 GAYVLLKRE 191
>Q9WTR7:SC11C_RAT Signal peptidase complex catalytic subunit SEC11C - Rattus| norvegicus (Rat) Length = 192 Score = 209 bits (532), Expect = 1e-53 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = +1 Query: 91 GREIP-AEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 267 G +P + + GD +R M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VV Sbjct: 8 GTHLPTSSLDIFGD----LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 63 Query: 268 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 444 VLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ Sbjct: 64 VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 122 Query: 445 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 624 LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG VTI+M + P KY L+ + Sbjct: 123 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALVAVM 182 Query: 625 GLLVITSKE 651 G V+ +E Sbjct: 183 GAYVLLKRE 191
>Q5RC30:SC11C_PONPY Signal peptidase complex catalytic subunit SEC11C - Pongo pygmaeus| (Orangutan) Length = 192 Score = 209 bits (531), Expect = 1e-53 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = +1 Query: 91 GREIPAE-MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 267 G +PA + GD ++ M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VV Sbjct: 8 GAHLPASGLDIFGD----LKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 63 Query: 268 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 444 VLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ Sbjct: 64 VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 122 Query: 445 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 624 LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG VTI+M + P KY L+ + Sbjct: 123 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 182 Query: 625 GLLVITSKE 651 G V+ +E Sbjct: 183 GAYVLLKRE 191
>Q9D8V7:SC11C_MOUSE Signal peptidase complex catalytic subunit SEC11C - Mus musculus| (Mouse) Length = 192 Score = 209 bits (531), Expect = 1e-53 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = +1 Query: 91 GREIP-AEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 267 G +P + + GD +R M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VV Sbjct: 8 GTHLPTSSLDIFGD----LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 63 Query: 268 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 444 VLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ Sbjct: 64 VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 122 Query: 445 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 624 LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG VTI+M + P KY L+ + Sbjct: 123 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 182 Query: 625 GLLVITSKE 651 G V+ +E Sbjct: 183 GAYVLLKRE 191
>Q9BY50:SC11C_HUMAN Signal peptidase complex catalytic subunit SEC11C - Homo sapiens| (Human) Length = 192 Score = 209 bits (531), Expect = 1e-53 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%) Frame = +1 Query: 91 GREIPAE-MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 267 G +PA + GD ++ M RQ+ Q+++ MIV+SAL+IWKGL+V TGSESP+VV Sbjct: 8 GAHLPASGLDIFGD----LKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 63 Query: 268 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 444 VLSGSMEP F RGD+LFL + +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ Sbjct: 64 VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 122 Query: 445 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 624 LTKGDNN DDR LY +GQ WL+K ++GRA G+LPYVG VTI+M + P KY L+ + Sbjct: 123 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 182 Query: 625 GLLVITSKE 651 G V+ +E Sbjct: 183 GAYVLLKRE 191
>P15367:SEC11_YEAST Signal peptidase complex catalytic subunit SEC11 - Saccharomyces| cerevisiae (Baker's yeast) Length = 167 Score = 143 bits (361), Expect = 8e-34 Identities = 73/168 (43%), Positives = 110/168 (65%), Gaps = 1/168 (0%) Frame = +1 Query: 151 MQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLHMS 330 M +R L +++++ + SA + W+GL +AT S SP+VVVLSGSMEP F+RGDILFL Sbjct: 1 MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNR 60 Query: 331 QDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLW 510 + G++VV+ ++G++IPIVHRV++ H + +LTKGDNN G+D LYA +++ Sbjct: 61 NTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHADKQF-LLTKGDNNAGNDISLYANKKIY 119 Query: 511 LQK-HHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 651 L K I+G GY P +G++TI ++E K+ L+G LGL + E Sbjct: 120 LNKSKEIVGTVKGYFPQLGYITIWISENKYAKFALLGMLGLSALLGGE 167
>P54506:LEPW_BACSU Signal peptidase I W - Bacillus subtilis| Length = 190 Score = 43.1 bits (100), Expect = 0.001 Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 11/162 (6%) Frame = +1 Query: 187 LGMIVTSALIIWKGLMVATGSES--PVVV------VLSGSMEPGFKRGDILFLHMSQD-- 336 L +I+ + +I+ ++++T S P V VLSGSMEP F G ++ + D Sbjct: 8 LYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSGSMEPEFNTGSLILVKEITDVK 67 Query: 337 PIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQ 516 ++ G+++ F D + HR++ + ++ + TKGDNN D + Sbjct: 68 ELQKGDVITFMQDA-NTAVTHRIVDI--TKQGDHLLFKTKGDNNAAAD-------SAPVS 117 Query: 517 KHHIMGRAVGY-LPYVGWVTIVMTEKPIIKYLLIGALGLLVI 639 ++ + G+ LPY G++ + +PI +L+ G++++ Sbjct: 118 DENVRAQYTGFQLPYAGYM-LHFASQPIGTAVLLIVPGVMLL 158
>P48915:NU4M_CHOCR NADH-ubiquinone oxidoreductase chain 4 - Chondrus crispus| (Carragheen) Length = 492 Score = 36.6 bits (83), Expect = 0.13 Identities = 20/56 (35%), Positives = 28/56 (50%) Frame = +1 Query: 82 SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGS 249 +FA P FIG+ + + S Q+ + LT SLGMI +A IW + GS Sbjct: 382 TFANLGFPGTSSFIGEVLVLLSSFQINKTLTLFASLGMIFGAAYSIWLFNRIIFGS 437
>Q5RDA9:FBX42_PONPY F-box only protein 42 - Pongo pygmaeus (Orangutan)| Length = 717 Score = 32.3 bits (72), Expect = 2.5 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = -2 Query: 389 GISRPSILKTTISPVRIGSWLMCKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 225 G RP + T S R GS + SP+LN GS+ P G SL PV I+P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465
>Q6P3S6:FBX42_HUMAN F-box only protein 42 - Homo sapiens (Human)| Length = 717 Score = 32.3 bits (72), Expect = 2.5 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = -2 Query: 389 GISRPSILKTTISPVRIGSWLMCKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 225 G RP + T S R GS + SP+LN GS+ P G SL PV I+P Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465
>Q9UK32:KS6A6_HUMAN Ribosomal protein S6 kinase alpha-6 - Homo sapiens (Human)| Length = 745 Score = 32.3 bits (72), Expect = 2.5 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Frame = +1 Query: 292 GFKRGDILFLHMSQDPIRTGEIVVFNIDG--REIPIVHRVIKVHERQESGEVDIL-TKGD 462 G G++ L M +P+ GE + +G +EIPI H V + +E+ + + ++L G Sbjct: 22 GASSGEVNGLKMVDEPMEEGEADSCHDEGVVKEIPITHHVKEGYEKADPAQFELLKVLGQ 81 Query: 463 NNFGDDRLLYAQ-----GQLWLQK 519 +FG L+ + GQL+ K Sbjct: 82 GSFGKVFLVRKKTGPDAGQLYAMK 105
>Q8N5H7:SH2D3_HUMAN SH2 domain-containing protein 3C - Homo sapiens (Human)| Length = 860 Score = 31.6 bits (70), Expect = 4.3 Identities = 23/75 (30%), Positives = 33/75 (44%) Frame = -2 Query: 311 ISPLLNPGSMLPERTTTTGDSLPVATINPFHMINAEVTIIPRLMICVRTWRTCIDRIDST 132 +SP GS + R+ T D L + T +PR +R+ +D+I Sbjct: 345 VSPSGPKGSHMKRRSVTMTDGLTADKVTRSDGCPTS-TSLPRPRDSIRSCALSMDQIPDL 403 Query: 131 WSPMNPISAGISLPA 87 SPM+PIS S PA Sbjct: 404 HSPMSPISESPSSPA 418
>Q9M0R4:ATL4D_ARATH Putative RING-H2 finger protein ATL4D precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 357 Score = 31.2 bits (69), Expect = 5.6 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = -3 Query: 742 SSWYTAQQNLFCPRLHL--HYKIKPCTKVDSFTLSM 641 SSW+ + LF PR H H ++PC +D FTL + Sbjct: 223 SSWHVPE--LFLPRSHSTGHSLVQPCQNIDRFTLQL 256
>Q6DN56:RMAR_KLULA Mitochondrial ribosomal protein VAR1 - Kluyveromyces lactis (Yeast)| (Candida sphaerica) Length = 388 Score = 31.2 bits (69), Expect = 5.6 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Frame = -1 Query: 492 IQKSVIPKIIITF---REDINFSTFLAFMNLNHTVNNWNFTAINIKNNYFSSADRILAHV 322 I K +I K I + +I F +L++ N+N +NN N NI +NY + + L ++ Sbjct: 110 IYKLIISKPIFEHSINKVNIKFFYYLSYKNINKNINNNNNLINNIYSNYKFNINSKLINL 169 Query: 321 QKQNITPFKSRL 286 NI + L Sbjct: 170 LNNNINSISNIL 181
>P93313:NU4M_ARATH NADH-ubiquinone oxidoreductase chain 4 - Arabidopsis thaliana| (Mouse-ear cress) Length = 495 Score = 31.2 bits (69), Expect = 5.6 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = +1 Query: 82 SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESP 258 + A +P FIG+ + + + Q ++ + +LGMI+ +A +W V +G+ P Sbjct: 385 TLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLKP 443
>Q7TSX5:SMS1_RAT Phosphatidylcholine:ceramide cholinephosphotransferase 1 - Rattus| norvegicus (Rat) Length = 419 Score = 30.8 bits (68), Expect = 7.3 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +2 Query: 233 WLRQGASRRLWWFFLVAWSLDLKGVIFC 316 ++++ + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>A0AAS4:SMS1_PIG Phosphatidylcholine:ceramide cholinephosphotransferase 1 - Sus| scrofa (Pig) Length = 413 Score = 30.8 bits (68), Expect = 7.3 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +2 Query: 233 WLRQGASRRLWWFFLVAWSLDLKGVIFC 316 ++++ + RRLWW+ + W L + G IFC Sbjct: 295 FIKEYSPRRLWWYHWICWLLSVVG-IFC 321
>Q8VCQ6:SMS1_MOUSE Phosphatidylcholine:ceramide cholinephosphotransferase 1 - Mus| musculus (Mouse) Length = 419 Score = 30.8 bits (68), Expect = 7.3 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +2 Query: 233 WLRQGASRRLWWFFLVAWSLDLKGVIFC 316 ++++ + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>Q86VZ5:SMS1_HUMAN Phosphatidylcholine:ceramide cholinephosphotransferase 1 - Homo| sapiens (Human) Length = 419 Score = 30.8 bits (68), Expect = 7.3 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +2 Query: 233 WLRQGASRRLWWFFLVAWSLDLKGVIFC 316 ++++ + RRLWW+ + W L + G IFC Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327
>Q7T3T4:SMS1_CHICK Phosphatidylcholine:ceramide cholinephosphotransferase 1 - Gallus| gallus (Chicken) Length = 417 Score = 30.4 bits (67), Expect = 9.5 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = +2 Query: 233 WLRQGASRRLWWFFLVAWSLDLKGVIFC 316 ++++ + RRLWW+ + W+L + G +FC Sbjct: 299 FIKEYSPRRLWWYHWLCWTLSMVG-MFC 325
>P27572:NU4M_WHEAT NADH-ubiquinone oxidoreductase chain 4 - Triticum aestivum (Wheat)| Length = 495 Score = 30.4 bits (67), Expect = 9.5 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = +1 Query: 82 SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESP 258 + A +P FIG+ + + + Q ++ + +LGMI+ +A +W V +G+ P Sbjct: 385 TLANMSLPGTSSFIGEFLILVGAFQRNSLVATLRALGMILGAAYSLWLYNRVVSGNLKP 443 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 151,023,871 Number of extensions: 3322790 Number of successful extensions: 8683 Number of sequences better than 10.0: 27 Number of HSP's gapped: 8656 Number of HSP's successfully gapped: 27 Length of query: 288 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 176 Effective length of database: 69,965,399 Effective search space: 12313910224 Effective search space used: 12313910224 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
