ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf143i24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK241349.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065148F23, full insert sequence Length = 1290 Score = 900 bits (454), Expect = 0.0 Identities = 772/878 (87%) Strand = Plus / Plus Query: 2101 tagtagctgcactccccaaacaacgtcaaacactcctattttctgctacagttccagatg 2160 |||| ||||||||||| || || ||||||||||| ||||||||||| || ||||| |||| Sbjct: 1 tagtggctgcactcccaaagcagcgtcaaacacttctattttctgcaactgttcctgatg 60 Query: 2161 aggttcgtcaagtatgtcatgttgccatgaaaagagatcttgaatttgtgaacactgttc 2220 |||| || |||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 61 aggtacgccaagtatgccacattgccatgaaaagagatcttgaatttgtgaacaccgttg 120 Query: 2221 aagaaggaagtgaggaaacacattcacaggtgaaacaaatgcatttggttgcaccactcg 2280 |||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||||| | Sbjct: 121 aagaaggaagtgaggaaacacactcacaggtgaagcaaatgcatgtagttgcaccactag 180 Query: 2281 acaaacaattctctatcctatatggtcttctaacggaccatatttcggaaaatgttgact 2340 ||||||| || |||||||| |||||||||||||| || |||||||| ||||||||||||| Sbjct: 181 acaaacagttttctatcctgtatggtcttctaactgatcatatttcagaaaatgttgact 240 Query: 2341 acaaggtgattgtgttttgtacaacagcaaaagtaacaagtcttgttgctgaactcctgt 2400 |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 241 acaaggtgatcgtgttttgtacaactgcaaaggtaacaagtcttgttgctgaacttctgt 300 Query: 2401 ctgaactgaagttgaacgtacgtgagatccactccagaaagccacaaagttacagaacca 2460 ||||| |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 301 ctgaattgaagttgaatgtacgcgagattcactccagaaagccacaaagttacagaacca 360 Query: 2461 ggatatcaaaagaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctg 2520 | ||||| |||||||||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 361 gaatatccaaagaatttaaggaatcaaaaggtcttattcttgttagctccgatgtatctg 420 Query: 2521 ctagaggtgttgattatcctaatgtcacactagttctgcagttgggagttcctagtgaca 2580 |||| || ||||||||||| |||||||||||||| | ||| ||||||| |||| ||||| Sbjct: 421 ctaggggcgttgattatcccaatgtcacactagtcgtccagatgggagtgcctactgaca 480 Query: 2581 gggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagcggtg 2640 | || |||||||| ||||| ||||||||||||||||||| ||| || |||||||| || Sbjct: 481 gagaacaatatattcatcgacttggtagaactggccgcagaggaaacgaggggagtggaa 540 Query: 2641 tcttattgttggcaccatgggaagaatacttcttgagaagtatcaaagatttgcctatta 2700 ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 541 tcttattattggcaccgtgggaagaatacttcttgagaagtatcaaagatctgcctatta 600 Query: 2701 cagaggcaacactaccactaattgatttggacactaaacggaaggttgagaaagcgcttg 2760 ||||||||||| |||| |||||||| ||||||||||| | |||||||| || || |||| Sbjct: 601 cagaggcaacattacctttaattgatctggacactaaaagaaaggttgaaaaggctcttg 660 Query: 2761 cacatgtggaggtgaaagataaggaatctgcttatcaagcatggcttggttactataatt 2820 ||||||||||||| || ||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 661 cacatgtggaggttaaggataaggaacttgcctaccaagcatggctcggttactataatt 720 Query: 2821 cgaataagcaaatcggccgtgataagtaccagcttgtatcgctggctaatgagttcagta 2880 | || ||| || || ||||| || |||||||||||||| || || ||||| ||||| | Sbjct: 721 ctaacaagttcattgggcgtgacaaataccagcttgtatcacttgccaatgaattcagca 780 Query: 2881 gaagtctgggcctcaacaaccctccagcactgactaagcttatccttaaaaagatgggac 2940 ||||||||||| | || |||||||| || || |||||||| |||||| ||||||||||| Sbjct: 781 gaagtctgggcttgaataaccctcctgcggtgcctaagcttgtccttagaaagatgggac 840 Query: 2941 tgagcaacattccaggtctacggtcaaaataatcttcc 2978 ||| ||| || |||||||| || |||||||| |||||| Sbjct: 841 tgaacaatatcccaggtctgcgatcaaaatagtcttcc 878
>ref|NM_001064299.1| Oryza sativa (japonica cultivar-group) Os06g0526600 (Os06g0526600) mRNA, complete cds Length = 2778 Score = 737 bits (372), Expect = 0.0 Identities = 593/669 (88%) Strand = Plus / Plus Query: 1677 aaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttgcttcca 1736 |||||||| || || ||||||| || || ||||||||||||||||||||||||||||| Sbjct: 1477 aaggatgttcttgcaaaagcaaaaactgggactggaaaaactgtagcattcttgcttcct 1536 Query: 1737 gccattgaagttgtctccaaattgccccctcatgaccatgatnnnnnnngaccacccatt 1796 |||||||||||||||||||||||||||||| ||| |||| | || ||||| Sbjct: 1537 gccattgaagttgtctccaaattgccccctattgattgtgataaaaaaaggcctcccatc 1596 Query: 1797 agtgttattgttgtgtgcccgacacgtgagcttgctgatcaggctgctgcagaggctaac 1856 |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 1597 agtgttgttgttgtgtgccctacacgtgagctggctgatcaggctgctgcagaagctaac 1656 Query: 1857 aaacttcttaaattccatccatcaattggagtacaacttgtaattggtggcactaggatg 1916 || || || ||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| Sbjct: 1657 aagctcctgaaatttcatccatcaattggagtgcaacttgtaataggtggcactagaatg 1716 Query: 1917 gctcttgagcagaaacgaatgcacacaaacccttgccagattctggtagctacaccggga 1976 ||||| |||||||| |||||||| || ||||||||||||||||| ||||||||||| ||| Sbjct: 1717 gctctagagcagaagcgaatgcatactaacccttgccagattctagtagctacaccagga 1776 Query: 1977 aggcttaaggatcatatggagaacacaccaggatttgctactagattgatgggcgtcaaa 2036 |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 1777 aggcttaaggatcatatggagaacactccagggtttgctactagattgatgggtgtcaaa 1836 Query: 2037 ttccttattcttgatgaagctgaccgcttgttagatatggggttccgaactgatattgag 2096 ||||||||||||||||||| || ||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1837 gtccttattcttgatgaagcggatcgcttattagatatgggattccggactgatatcgag 1896 Query: 2097 agaatagtagctgcactccccaaacaacgtcaaacactcctattttctgctacagttcca 2156 |||||||| ||||||||||| || || ||||||||||| ||||||||||| || ||||| Sbjct: 1897 agaatagtggctgcactcccaaagcagcgtcaaacacttctattttctgcaactgttcct 1956 Query: 2157 gatgaggttcgtcaagtatgtcatgttgccatgaaaagagatcttgaatttgtgaacact 2216 |||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 1957 gatgaggtacgccaagtatgccacattgccatgaaaagagatcttgaatttgtgaacacc 2016 Query: 2217 gttcaagaaggaagtgaggaaacacattcacaggtgaaacaaatgcatttggttgcacca 2276 ||| |||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||| Sbjct: 2017 gttgaagaaggaagtgaggaaacacactcacaggtgaagcaaatgcatgtagttgcacca 2076 Query: 2277 ctcgacaaacaattctctatcctatatggtcttctaacggaccatatttcggaaaatgtt 2336 || |||||||| || |||||||| |||||||||||||| || |||||||| ||||||||| Sbjct: 2077 ctagacaaacagttttctatcctgtatggtcttctaactgatcatatttcagaaaatgtt 2136 Query: 2337 gactacaag 2345 ||||||||| Sbjct: 2137 gactacaag 2145 Score = 513 bits (259), Expect = e-141 Identities = 466/535 (87%) Strand = Plus / Plus Query: 2409 aagttgaacgtacgtgagatccactccagaaagccacaaagttacagaaccaggatatca 2468 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2143 aagttgaatgtacgcgagattcactccagaaagccacaaagttacagaaccagaatatcc 2202 Query: 2469 aaagaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgctagaggt 2528 |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || Sbjct: 2203 aaagaatttaaggaatcaaaaggtcttattcttgttagctccgatgtatctgctaggggc 2262 Query: 2529 gttgattatcctaatgtcacactagttctgcagttgggagttcctagtgacagggagcaa 2588 ||||||||||| |||||||||||||| | ||| ||||||| |||| |||||| || ||| Sbjct: 2263 gttgattatcccaatgtcacactagtcgtccagatgggagtgcctactgacagagaacaa 2322 Query: 2589 tatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagcggtgtcttattg 2648 ||||| ||||| ||||||||||||||||||| ||| || |||||||| || ||||||| Sbjct: 2323 tatattcatcgacttggtagaactggccgcagaggaaacgaggggagtggaatcttatta 2382 Query: 2649 ttggcaccatgggaagaatacttcttgagaagtatcaaagatttgcctattacagaggca 2708 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2383 ttggcaccgtgggaagaatacttcttgagaagtatcaaagatctgcctattacagaggca 2442 Query: 2709 acactaccactaattgatttggacactaaacggaaggttgagaaagcgcttgcacatgtg 2768 ||| |||| |||||||| ||||||||||| | |||||||| || || |||||||||||| Sbjct: 2443 acattacctttaattgatctggacactaaaagaaaggttgaaaaggctcttgcacatgtg 2502 Query: 2769 gaggtgaaagataaggaatctgcttatcaagcatggcttggttactataattcgaataag 2828 ||||| || ||||||||| ||| || ||||||||||| |||||||||||||| || ||| Sbjct: 2503 gaggttaaggataaggaacttgcctaccaagcatggctcggttactataattctaacaag 2562 Query: 2829 caaatcggccgtgataagtaccagcttgtatcgctggctaatgagttcagtagaagtctg 2888 || || ||||| || |||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 2563 ttcattgggcgtgacaaataccagcttgtatcacttgccaatgaattcagcagaagtctg 2622 Query: 2889 ggcctcaacaaccctccagcactgactaagcttatccttaaaaagatgggactga 2943 ||| | || |||||||| || || |||||||| |||||| |||||||||||||| Sbjct: 2623 ggcttgaataaccctcctgcggtgcctaagcttgtccttagaaagatgggactga 2677 Score = 194 bits (98), Expect = 1e-45 Identities = 182/210 (86%) Strand = Plus / Plus Query: 230 gagcctaatcgaggacgaggccgacctcagcgactgggtcagcgacatcaaggccgactc 289 |||||| ||||||||||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 186 gagcctgatcgaggacgaggccgagctcagcgactggatcagcgacctcaagaccgactc 245 Query: 290 cttcaaccttggcatcagcagcggcgacgagcgcgaggcctccactcgcaaccccgctgc 349 ||| |||| ||| |||||||||||||||| ||||||||||||| ||| || ||||| Sbjct: 246 gttccacctcggcctcagcagcggcgacgaaggcgaggcctccacgcgcgggccggctgc 305 Query: 350 ctccaggggaggccgaagagggagggattcggggggaccgccgacgaggtcgaggtttga 409 ||| ||||||||||| || ||| |||| ||| |||| |||||| |||||||||| || | Sbjct: 306 ctcgaggggaggccggagggggcgggactcgaggggcccgccgccgaggtcgagattcgg 365 Query: 410 tggcggtgatttcggcggcgagaggcgtgg 439 ||||||||||||||||||||| |||||||| Sbjct: 366 tggcggtgatttcggcggcgataggcgtgg 395 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Plus Query: 819 gggaggtatggtgatttggatgatgaagagtctgggtttgggtctcccaggggaagacga 878 |||||||| |||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 739 gggaggtacagtgatttggatgatgatgaaggtgggtttgggtctctgaggggaagacgc 798 Query: 879 ggtcgtggtggaagga 894 ||||| |||||||||| Sbjct: 799 ggtcgcggtggaagga 814 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1385 ggaagttgatgaggatgataggccatcaggttttgaggatgatctct 1431 ||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 1164 ggaagttgatgaggatgatggtccatcaggcttcgaggatgatctct 1210 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Plus Query: 860 gtctcccaggggaagacgaggtcgtggtggaagga 894 |||||| ||||||||||| |||||||||||||||| Sbjct: 891 gtctccaaggggaagacgtggtcgtggtggaagga 925 Score = 46.1 bits (23), Expect = 0.82 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1094 gtctcccaggggaattcgtggccgtggtggaaggatgtc 1132 |||||| ||||||| ||||| ||||||||||||||||| Sbjct: 891 gtctccaaggggaagacgtggtcgtggtggaaggatgtc 929
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 291 bits (147), Expect = 8e-75 Identities = 195/211 (92%) Strand = Plus / Minus Query: 2344 aggtgattgtgttttgtacaacagcaaaagtaacaagtcttgttgctgaactcctgtctg 2403 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 19172096 aggtgatcgtgttttgtacaactgcaaaggtaacaagtcttgttgctgaacttctgtctg 19172037 Query: 2404 aactgaagttgaacgtacgtgagatccactccagaaagccacaaagttacagaaccagga 2463 || |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 19172036 aattgaagttgaatgtacgcgagattcactccagaaagccacaaagttacagaaccagaa 19171977 Query: 2464 tatcaaaagaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgcta 2523 |||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 19171976 tatccaaagaatttaaggaatcaaaaggtcttattcttgttagctccgatgtatctgcta 19171917 Query: 2524 gaggtgttgattatcctaatgtcacactagt 2554 | || ||||||||||| |||||||||||||| Sbjct: 19171916 ggggcgttgattatcccaatgtcacactagt 19171886 Score = 262 bits (132), Expect = 7e-66 Identities = 192/212 (90%) Strand = Plus / Minus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacaccaggattt 2012 |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 19172744 cagattctagtagctacaccaggaaggcttaaggatcatatggagaacactccagggttt 19172685 Query: 2013 gctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgcttgttagat 2072 ||||||||||||||||| |||||| ||||||||||||||||||| || ||||| |||||| Sbjct: 19172684 gctactagattgatgggtgtcaaagtccttattcttgatgaagcggatcgcttattagat 19172625 Query: 2073 atggggttccgaactgatattgagagaatagtagctgcactccccaaacaacgtcaaaca 2132 ||||| ||||| |||||||| ||||||||||| ||||||||||| || || ||||||||| Sbjct: 19172624 atgggattccggactgatatcgagagaatagtggctgcactcccaaagcagcgtcaaaca 19172565 Query: 2133 ctcctattttctgctacagttccagatgaggt 2164 || ||||||||||| || ||||| |||||||| Sbjct: 19172564 cttctattttctgcaactgttcctgatgaggt 19172533 Score = 216 bits (109), Expect = 4e-52 Identities = 195/226 (86%) Strand = Plus / Minus Query: 1730 gcttccagccattgaagttgtctccaaattgccccctcatgaccatgatnnnnnnngacc 1789 |||||| |||||||||||||||||||||||||||||| ||| |||| | || Sbjct: 19173048 gcttcctgccattgaagttgtctccaaattgccccctattgattgtgataaaaaaaggcc 19172989 Query: 1790 acccattagtgttattgttgtgtgcccgacacgtgagcttgctgatcaggctgctgcaga 1849 ||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 19172988 tcccatcagtgttgttgttgtgtgccctacacgtgagctggctgatcaggctgctgcaga 19172929 Query: 1850 ggctaacaaacttcttaaattccatccatcaattggagtacaacttgtaattggtggcac 1909 |||||||| || || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 19172928 agctaacaagctcctgaaatttcatccatcaattggagtgcaacttgtaataggtggcac 19172869 Query: 1910 taggatggctcttgagcagaaacgaatgcacacaaacccttgccag 1955 ||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 19172868 tagaatggctctagagcagaagcgaatgcatactaacccttgccag 19172823 Score = 202 bits (102), Expect = 6e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 2557 tgcagttgggagttcctagtgacagggagcaatatatccatcgtcttggtagaactggcc 2616 ||||| ||||||| |||| |||||| || |||||||| ||||| |||||||||||||||| Sbjct: 19171648 tgcagatgggagtgcctactgacagagaacaatatattcatcgacttggtagaactggcc 19171589 Query: 2617 gcaaaggtaatgaggggagcggtgtcttattgttggcaccatgggaagaatacttcttga 2676 ||| ||| || |||||||| || ||||||| |||||||| ||||||||||||||||||| Sbjct: 19171588 gcagaggaaacgaggggagtggaatcttattattggcaccgtgggaagaatacttcttga 19171529 Query: 2677 gaagtatcaaagatttgcctattacagaggcaacactaccactaattgatttggacacta 2736 |||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||| Sbjct: 19171528 gaagtatcaaagatctgcctattacagaggcaacattacctttaattgatctggacacta 19171469 Query: 2737 aa 2738 || Sbjct: 19171468 aa 19171467 Score = 194 bits (98), Expect = 1e-45 Identities = 182/210 (86%) Strand = Plus / Minus Query: 230 gagcctaatcgaggacgaggccgacctcagcgactgggtcagcgacatcaaggccgactc 289 |||||| ||||||||||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 19176697 gagcctgatcgaggacgaggccgagctcagcgactggatcagcgacctcaagaccgactc 19176638 Query: 290 cttcaaccttggcatcagcagcggcgacgagcgcgaggcctccactcgcaaccccgctgc 349 ||| |||| ||| |||||||||||||||| ||||||||||||| ||| || ||||| Sbjct: 19176637 gttccacctcggcctcagcagcggcgacgaaggcgaggcctccacgcgcgggccggctgc 19176578 Query: 350 ctccaggggaggccgaagagggagggattcggggggaccgccgacgaggtcgaggtttga 409 ||| ||||||||||| || ||| |||| ||| |||| |||||| |||||||||| || | Sbjct: 19176577 ctcgaggggaggccggagggggcgggactcgaggggcccgccgccgaggtcgagattcgg 19176518 Query: 410 tggcggtgatttcggcggcgagaggcgtgg 439 ||||||||||||||||||||| |||||||| Sbjct: 19176517 tggcggtgatttcggcggcgataggcgtgg 19176488 Score = 159 bits (80), Expect = 8e-35 Identities = 197/236 (83%) Strand = Plus / Minus Query: 2743 aggttgagaaagcgcttgcacatgtggaggtgaaagataaggaatctgcttatcaagcat 2802 ||||||| || || ||||||||||||||||| || ||||||||| ||| || ||||||| Sbjct: 19169729 aggttgaaaaggctcttgcacatgtggaggttaaggataaggaacttgcctaccaagcat 19169670 Query: 2803 ggcttggttactataattcgaataagcaaatcggccgtgataagtaccagcttgtatcgc 2862 |||| |||||||||||||| || ||| || || ||||| || |||||||||||||| | Sbjct: 19169669 ggctcggttactataattctaacaagttcattgggcgtgacaaataccagcttgtatcac 19169610 Query: 2863 tggctaatgagttcagtagaagtctgggcctcaacaaccctccagcactgactaagctta 2922 | || ||||| ||||| |||||||||||| | || |||||||| || || |||||||| Sbjct: 19169609 ttgccaatgaattcagcagaagtctgggcttgaataaccctcctgcggtgcctaagcttg 19169550 Query: 2923 tccttaaaaagatgggactgagcaacattccaggtctacggtcaaaataatcttcc 2978 |||||| |||||||||||||| ||| || |||||||| || |||||||| |||||| Sbjct: 19169549 tccttagaaagatgggactgaacaatatcccaggtctgcgatcaaaatagtcttcc 19169494 Score = 147 bits (74), Expect = 3e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1566 aggtttgatgaatgttccctctctcctgcgacgttaaaaggtgttaaagctgctgggtat 1625 |||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 19174982 aggtttgatgaatgctccctgtctcccttgacactaaaaggtgttaaagctgctgggtat 19174923 Query: 1626 gaacggatgactgcggttcaggaggccactcttcctattatacttaaagg 1675 |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 19174922 gaacggatgactgcagtgcaggaggccactcttcctattatacttaaagg 19174873 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Minus Query: 2247 caggtgaaacaaatgcatttggttgcaccactcgacaaacaattctctatcctatatggt 2306 |||||||| ||||||||| | ||||||||||| |||||||| || |||||||| |||||| Sbjct: 19172259 caggtgaagcaaatgcatgtagttgcaccactagacaaacagttttctatcctgtatggt 19172200 Query: 2307 cttctaacggaccatatttcggaaaatgttgactacaaggt 2347 |||||||| || |||||||| |||||||||||||||||||| Sbjct: 19172199 cttctaactgatcatatttcagaaaatgttgactacaaggt 19172159 Score = 117 bits (59), Expect = 3e-22 Identities = 77/83 (92%) Strand = Plus / Minus Query: 2169 caagtatgtcatgttgccatgaaaagagatcttgaatttgtgaacactgttcaagaagga 2228 |||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 19172458 caagtatgccacattgccatgaaaagagatcttgaatttgtgaacaccgttgaagaagga 19172399 Query: 2229 agtgaggaaacacattcacaggt 2251 |||||||||||||| |||||||| Sbjct: 19172398 agtgaggaaacacactcacaggt 19172376 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Minus Query: 819 gggaggtatggtgatttggatgatgaagagtctgggtttgggtctcccaggggaagacga 878 |||||||| |||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 19176144 gggaggtacagtgatttggatgatgatgaaggtgggtttgggtctctgaggggaagacgc 19176085 Query: 879 ggtcgtggtggaagga 894 ||||| |||||||||| Sbjct: 19176084 ggtcgcggtggaagga 19176069 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Minus Query: 1385 ggaagttgatgaggatgataggccatcaggttttgaggatgatctct 1431 ||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 19175719 ggaagttgatgaggatgatggtccatcaggcttcgaggatgatctct 19175673 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 860 gtctcccaggggaagacgaggtcgtggtggaagga 894 |||||| ||||||||||| |||||||||||||||| Sbjct: 19175992 gtctccaaggggaagacgtggtcgtggtggaagga 19175958 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1677 aaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||||||| || || ||||||| || || |||||||||||||||||||||||| Sbjct: 19173203 aaggatgttcttgcaaaagcaaaaactgggactggaaaaactgtagcattcttg 19173150 Score = 46.1 bits (23), Expect = 0.82 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1094 gtctcccaggggaattcgtggccgtggtggaaggatgtc 1132 |||||| ||||||| ||||| ||||||||||||||||| Sbjct: 19175992 gtctccaaggggaagacgtggtcgtggtggaaggatgtc 19175954 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 70 accacctgcttggcttcctccgccgcgccgcggc 103 ||||||| || ||| ||||||||||||||||||| Sbjct: 19181862 accacctcctcggcctcctccgccgcgccgcggc 19181829
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 291 bits (147), Expect = 8e-75 Identities = 195/211 (92%) Strand = Plus / Minus Query: 2344 aggtgattgtgttttgtacaacagcaaaagtaacaagtcttgttgctgaactcctgtctg 2403 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 9860 aggtgatcgtgttttgtacaactgcaaaggtaacaagtcttgttgctgaacttctgtctg 9801 Query: 2404 aactgaagttgaacgtacgtgagatccactccagaaagccacaaagttacagaaccagga 2463 || |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 9800 aattgaagttgaatgtacgcgagattcactccagaaagccacaaagttacagaaccagaa 9741 Query: 2464 tatcaaaagaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgcta 2523 |||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 9740 tatccaaagaatttaaggaatcaaaaggtcttattcttgttagctccgatgtatctgcta 9681 Query: 2524 gaggtgttgattatcctaatgtcacactagt 2554 | || ||||||||||| |||||||||||||| Sbjct: 9680 ggggcgttgattatcccaatgtcacactagt 9650 Score = 262 bits (132), Expect = 7e-66 Identities = 192/212 (90%) Strand = Plus / Minus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacaccaggattt 2012 |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 10508 cagattctagtagctacaccaggaaggcttaaggatcatatggagaacactccagggttt 10449 Query: 2013 gctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgcttgttagat 2072 ||||||||||||||||| |||||| ||||||||||||||||||| || ||||| |||||| Sbjct: 10448 gctactagattgatgggtgtcaaagtccttattcttgatgaagcggatcgcttattagat 10389 Query: 2073 atggggttccgaactgatattgagagaatagtagctgcactccccaaacaacgtcaaaca 2132 ||||| ||||| |||||||| ||||||||||| ||||||||||| || || ||||||||| Sbjct: 10388 atgggattccggactgatatcgagagaatagtggctgcactcccaaagcagcgtcaaaca 10329 Query: 2133 ctcctattttctgctacagttccagatgaggt 2164 || ||||||||||| || ||||| |||||||| Sbjct: 10328 cttctattttctgcaactgttcctgatgaggt 10297 Score = 216 bits (109), Expect = 4e-52 Identities = 195/226 (86%) Strand = Plus / Minus Query: 1730 gcttccagccattgaagttgtctccaaattgccccctcatgaccatgatnnnnnnngacc 1789 |||||| |||||||||||||||||||||||||||||| ||| |||| | || Sbjct: 10812 gcttcctgccattgaagttgtctccaaattgccccctattgattgtgataaaaaaaggcc 10753 Query: 1790 acccattagtgttattgttgtgtgcccgacacgtgagcttgctgatcaggctgctgcaga 1849 ||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 10752 tcccatcagtgttgttgttgtgtgccctacacgtgagctggctgatcaggctgctgcaga 10693 Query: 1850 ggctaacaaacttcttaaattccatccatcaattggagtacaacttgtaattggtggcac 1909 |||||||| || || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 10692 agctaacaagctcctgaaatttcatccatcaattggagtgcaacttgtaataggtggcac 10633 Query: 1910 taggatggctcttgagcagaaacgaatgcacacaaacccttgccag 1955 ||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 10632 tagaatggctctagagcagaagcgaatgcatactaacccttgccag 10587 Score = 202 bits (102), Expect = 6e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 2557 tgcagttgggagttcctagtgacagggagcaatatatccatcgtcttggtagaactggcc 2616 ||||| ||||||| |||| |||||| || |||||||| ||||| |||||||||||||||| Sbjct: 9412 tgcagatgggagtgcctactgacagagaacaatatattcatcgacttggtagaactggcc 9353 Query: 2617 gcaaaggtaatgaggggagcggtgtcttattgttggcaccatgggaagaatacttcttga 2676 ||| ||| || |||||||| || ||||||| |||||||| ||||||||||||||||||| Sbjct: 9352 gcagaggaaacgaggggagtggaatcttattattggcaccgtgggaagaatacttcttga 9293 Query: 2677 gaagtatcaaagatttgcctattacagaggcaacactaccactaattgatttggacacta 2736 |||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||| Sbjct: 9292 gaagtatcaaagatctgcctattacagaggcaacattacctttaattgatctggacacta 9233 Query: 2737 aa 2738 || Sbjct: 9232 aa 9231 Score = 194 bits (98), Expect = 1e-45 Identities = 182/210 (86%) Strand = Plus / Minus Query: 230 gagcctaatcgaggacgaggccgacctcagcgactgggtcagcgacatcaaggccgactc 289 |||||| ||||||||||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 14461 gagcctgatcgaggacgaggccgagctcagcgactggatcagcgacctcaagaccgactc 14402 Query: 290 cttcaaccttggcatcagcagcggcgacgagcgcgaggcctccactcgcaaccccgctgc 349 ||| |||| ||| |||||||||||||||| ||||||||||||| ||| || ||||| Sbjct: 14401 gttccacctcggcctcagcagcggcgacgaaggcgaggcctccacgcgcgggccggctgc 14342 Query: 350 ctccaggggaggccgaagagggagggattcggggggaccgccgacgaggtcgaggtttga 409 ||| ||||||||||| || ||| |||| ||| |||| |||||| |||||||||| || | Sbjct: 14341 ctcgaggggaggccggagggggcgggactcgaggggcccgccgccgaggtcgagattcgg 14282 Query: 410 tggcggtgatttcggcggcgagaggcgtgg 439 ||||||||||||||||||||| |||||||| Sbjct: 14281 tggcggtgatttcggcggcgataggcgtgg 14252 Score = 159 bits (80), Expect = 8e-35 Identities = 197/236 (83%) Strand = Plus / Minus Query: 2743 aggttgagaaagcgcttgcacatgtggaggtgaaagataaggaatctgcttatcaagcat 2802 ||||||| || || ||||||||||||||||| || ||||||||| ||| || ||||||| Sbjct: 7493 aggttgaaaaggctcttgcacatgtggaggttaaggataaggaacttgcctaccaagcat 7434 Query: 2803 ggcttggttactataattcgaataagcaaatcggccgtgataagtaccagcttgtatcgc 2862 |||| |||||||||||||| || ||| || || ||||| || |||||||||||||| | Sbjct: 7433 ggctcggttactataattctaacaagttcattgggcgtgacaaataccagcttgtatcac 7374 Query: 2863 tggctaatgagttcagtagaagtctgggcctcaacaaccctccagcactgactaagctta 2922 | || ||||| ||||| |||||||||||| | || |||||||| || || |||||||| Sbjct: 7373 ttgccaatgaattcagcagaagtctgggcttgaataaccctcctgcggtgcctaagcttg 7314 Query: 2923 tccttaaaaagatgggactgagcaacattccaggtctacggtcaaaataatcttcc 2978 |||||| |||||||||||||| ||| || |||||||| || |||||||| |||||| Sbjct: 7313 tccttagaaagatgggactgaacaatatcccaggtctgcgatcaaaatagtcttcc 7258 Score = 147 bits (74), Expect = 3e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1566 aggtttgatgaatgttccctctctcctgcgacgttaaaaggtgttaaagctgctgggtat 1625 |||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 12746 aggtttgatgaatgctccctgtctcccttgacactaaaaggtgttaaagctgctgggtat 12687 Query: 1626 gaacggatgactgcggttcaggaggccactcttcctattatacttaaagg 1675 |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 12686 gaacggatgactgcagtgcaggaggccactcttcctattatacttaaagg 12637 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Minus Query: 2247 caggtgaaacaaatgcatttggttgcaccactcgacaaacaattctctatcctatatggt 2306 |||||||| ||||||||| | ||||||||||| |||||||| || |||||||| |||||| Sbjct: 10023 caggtgaagcaaatgcatgtagttgcaccactagacaaacagttttctatcctgtatggt 9964 Query: 2307 cttctaacggaccatatttcggaaaatgttgactacaaggt 2347 |||||||| || |||||||| |||||||||||||||||||| Sbjct: 9963 cttctaactgatcatatttcagaaaatgttgactacaaggt 9923 Score = 117 bits (59), Expect = 3e-22 Identities = 77/83 (92%) Strand = Plus / Minus Query: 2169 caagtatgtcatgttgccatgaaaagagatcttgaatttgtgaacactgttcaagaagga 2228 |||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 10222 caagtatgccacattgccatgaaaagagatcttgaatttgtgaacaccgttgaagaagga 10163 Query: 2229 agtgaggaaacacattcacaggt 2251 |||||||||||||| |||||||| Sbjct: 10162 agtgaggaaacacactcacaggt 10140 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Minus Query: 819 gggaggtatggtgatttggatgatgaagagtctgggtttgggtctcccaggggaagacga 878 |||||||| |||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 13908 gggaggtacagtgatttggatgatgatgaaggtgggtttgggtctctgaggggaagacgc 13849 Query: 879 ggtcgtggtggaagga 894 ||||| |||||||||| Sbjct: 13848 ggtcgcggtggaagga 13833 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Minus Query: 1385 ggaagttgatgaggatgataggccatcaggttttgaggatgatctct 1431 ||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 13483 ggaagttgatgaggatgatggtccatcaggcttcgaggatgatctct 13437 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 860 gtctcccaggggaagacgaggtcgtggtggaagga 894 |||||| ||||||||||| |||||||||||||||| Sbjct: 13756 gtctccaaggggaagacgtggtcgtggtggaagga 13722 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1677 aaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||||||| || || ||||||| || || |||||||||||||||||||||||| Sbjct: 10967 aaggatgttcttgcaaaagcaaaaactgggactggaaaaactgtagcattcttg 10914 Score = 46.1 bits (23), Expect = 0.82 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1094 gtctcccaggggaattcgtggccgtggtggaaggatgtc 1132 |||||| ||||||| ||||| ||||||||||||||||| Sbjct: 13756 gtctccaaggggaagacgtggtcgtggtggaaggatgtc 13718 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 70 accacctgcttggcttcctccgccgcgccgcggc 103 ||||||| || ||| ||||||||||||||||||| Sbjct: 19626 accacctcctcggcctcctccgccgcgccgcggc 19593
>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0043B22 Length = 158857 Score = 291 bits (147), Expect = 8e-75 Identities = 195/211 (92%) Strand = Plus / Minus Query: 2344 aggtgattgtgttttgtacaacagcaaaagtaacaagtcttgttgctgaactcctgtctg 2403 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct: 75581 aggtgatcgtgttttgtacaactgcaaaggtaacaagtcttgttgctgaacttctgtctg 75522 Query: 2404 aactgaagttgaacgtacgtgagatccactccagaaagccacaaagttacagaaccagga 2463 || |||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 75521 aattgaagttgaatgtacgcgagattcactccagaaagccacaaagttacagaaccagaa 75462 Query: 2464 tatcaaaagaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgcta 2523 |||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 75461 tatccaaagaatttaaggaatcaaaaggtcttattcttgttagctccgatgtatctgcta 75402 Query: 2524 gaggtgttgattatcctaatgtcacactagt 2554 | || ||||||||||| |||||||||||||| Sbjct: 75401 ggggcgttgattatcccaatgtcacactagt 75371 Score = 262 bits (132), Expect = 7e-66 Identities = 192/212 (90%) Strand = Plus / Minus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacaccaggattt 2012 |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 76229 cagattctagtagctacaccaggaaggcttaaggatcatatggagaacactccagggttt 76170 Query: 2013 gctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgcttgttagat 2072 ||||||||||||||||| |||||| ||||||||||||||||||| || ||||| |||||| Sbjct: 76169 gctactagattgatgggtgtcaaagtccttattcttgatgaagcggatcgcttattagat 76110 Query: 2073 atggggttccgaactgatattgagagaatagtagctgcactccccaaacaacgtcaaaca 2132 ||||| ||||| |||||||| ||||||||||| ||||||||||| || || ||||||||| Sbjct: 76109 atgggattccggactgatatcgagagaatagtggctgcactcccaaagcagcgtcaaaca 76050 Query: 2133 ctcctattttctgctacagttccagatgaggt 2164 || ||||||||||| || ||||| |||||||| Sbjct: 76049 cttctattttctgcaactgttcctgatgaggt 76018 Score = 216 bits (109), Expect = 4e-52 Identities = 195/226 (86%) Strand = Plus / Minus Query: 1730 gcttccagccattgaagttgtctccaaattgccccctcatgaccatgatnnnnnnngacc 1789 |||||| |||||||||||||||||||||||||||||| ||| |||| | || Sbjct: 76533 gcttcctgccattgaagttgtctccaaattgccccctattgattgtgataaaaaaaggcc 76474 Query: 1790 acccattagtgttattgttgtgtgcccgacacgtgagcttgctgatcaggctgctgcaga 1849 ||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 76473 tcccatcagtgttgttgttgtgtgccctacacgtgagctggctgatcaggctgctgcaga 76414 Query: 1850 ggctaacaaacttcttaaattccatccatcaattggagtacaacttgtaattggtggcac 1909 |||||||| || || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 76413 agctaacaagctcctgaaatttcatccatcaattggagtgcaacttgtaataggtggcac 76354 Query: 1910 taggatggctcttgagcagaaacgaatgcacacaaacccttgccag 1955 ||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 76353 tagaatggctctagagcagaagcgaatgcatactaacccttgccag 76308 Score = 202 bits (102), Expect = 6e-48 Identities = 162/182 (89%) Strand = Plus / Minus Query: 2557 tgcagttgggagttcctagtgacagggagcaatatatccatcgtcttggtagaactggcc 2616 ||||| ||||||| |||| |||||| || |||||||| ||||| |||||||||||||||| Sbjct: 75133 tgcagatgggagtgcctactgacagagaacaatatattcatcgacttggtagaactggcc 75074 Query: 2617 gcaaaggtaatgaggggagcggtgtcttattgttggcaccatgggaagaatacttcttga 2676 ||| ||| || |||||||| || ||||||| |||||||| ||||||||||||||||||| Sbjct: 75073 gcagaggaaacgaggggagtggaatcttattattggcaccgtgggaagaatacttcttga 75014 Query: 2677 gaagtatcaaagatttgcctattacagaggcaacactaccactaattgatttggacacta 2736 |||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||| Sbjct: 75013 gaagtatcaaagatctgcctattacagaggcaacattacctttaattgatctggacacta 74954 Query: 2737 aa 2738 || Sbjct: 74953 aa 74952 Score = 194 bits (98), Expect = 1e-45 Identities = 182/210 (86%) Strand = Plus / Minus Query: 230 gagcctaatcgaggacgaggccgacctcagcgactgggtcagcgacatcaaggccgactc 289 |||||| ||||||||||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 80182 gagcctgatcgaggacgaggccgagctcagcgactggatcagcgacctcaagaccgactc 80123 Query: 290 cttcaaccttggcatcagcagcggcgacgagcgcgaggcctccactcgcaaccccgctgc 349 ||| |||| ||| |||||||||||||||| ||||||||||||| ||| || ||||| Sbjct: 80122 gttccacctcggcctcagcagcggcgacgaaggcgaggcctccacgcgcgggccggctgc 80063 Query: 350 ctccaggggaggccgaagagggagggattcggggggaccgccgacgaggtcgaggtttga 409 ||| ||||||||||| || ||| |||| ||| |||| |||||| |||||||||| || | Sbjct: 80062 ctcgaggggaggccggagggggcgggactcgaggggcccgccgccgaggtcgagattcgg 80003 Query: 410 tggcggtgatttcggcggcgagaggcgtgg 439 ||||||||||||||||||||| |||||||| Sbjct: 80002 tggcggtgatttcggcggcgataggcgtgg 79973 Score = 159 bits (80), Expect = 8e-35 Identities = 197/236 (83%) Strand = Plus / Minus Query: 2743 aggttgagaaagcgcttgcacatgtggaggtgaaagataaggaatctgcttatcaagcat 2802 ||||||| || || ||||||||||||||||| || ||||||||| ||| || ||||||| Sbjct: 73214 aggttgaaaaggctcttgcacatgtggaggttaaggataaggaacttgcctaccaagcat 73155 Query: 2803 ggcttggttactataattcgaataagcaaatcggccgtgataagtaccagcttgtatcgc 2862 |||| |||||||||||||| || ||| || || ||||| || |||||||||||||| | Sbjct: 73154 ggctcggttactataattctaacaagttcattgggcgtgacaaataccagcttgtatcac 73095 Query: 2863 tggctaatgagttcagtagaagtctgggcctcaacaaccctccagcactgactaagctta 2922 | || ||||| ||||| |||||||||||| | || |||||||| || || |||||||| Sbjct: 73094 ttgccaatgaattcagcagaagtctgggcttgaataaccctcctgcggtgcctaagcttg 73035 Query: 2923 tccttaaaaagatgggactgagcaacattccaggtctacggtcaaaataatcttcc 2978 |||||| |||||||||||||| ||| || |||||||| || |||||||| |||||| Sbjct: 73034 tccttagaaagatgggactgaacaatatcccaggtctgcgatcaaaatagtcttcc 72979 Score = 147 bits (74), Expect = 3e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1566 aggtttgatgaatgttccctctctcctgcgacgttaaaaggtgttaaagctgctgggtat 1625 |||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||||| Sbjct: 78467 aggtttgatgaatgctccctgtctcccttgacactaaaaggtgttaaagctgctgggtat 78408 Query: 1626 gaacggatgactgcggttcaggaggccactcttcctattatacttaaagg 1675 |||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 78407 gaacggatgactgcagtgcaggaggccactcttcctattatacttaaagg 78358 Score = 121 bits (61), Expect = 2e-23 Identities = 91/101 (90%) Strand = Plus / Minus Query: 2247 caggtgaaacaaatgcatttggttgcaccactcgacaaacaattctctatcctatatggt 2306 |||||||| ||||||||| | ||||||||||| |||||||| || |||||||| |||||| Sbjct: 75744 caggtgaagcaaatgcatgtagttgcaccactagacaaacagttttctatcctgtatggt 75685 Query: 2307 cttctaacggaccatatttcggaaaatgttgactacaaggt 2347 |||||||| || |||||||| |||||||||||||||||||| Sbjct: 75684 cttctaactgatcatatttcagaaaatgttgactacaaggt 75644 Score = 117 bits (59), Expect = 3e-22 Identities = 77/83 (92%) Strand = Plus / Minus Query: 2169 caagtatgtcatgttgccatgaaaagagatcttgaatttgtgaacactgttcaagaagga 2228 |||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 75943 caagtatgccacattgccatgaaaagagatcttgaatttgtgaacaccgttgaagaagga 75884 Query: 2229 agtgaggaaacacattcacaggt 2251 |||||||||||||| |||||||| Sbjct: 75883 agtgaggaaacacactcacaggt 75861 Score = 71.9 bits (36), Expect = 1e-08 Identities = 66/76 (86%) Strand = Plus / Minus Query: 819 gggaggtatggtgatttggatgatgaagagtctgggtttgggtctcccaggggaagacga 878 |||||||| |||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 79629 gggaggtacagtgatttggatgatgatgaaggtgggtttgggtctctgaggggaagacgc 79570 Query: 879 ggtcgtggtggaagga 894 ||||| |||||||||| Sbjct: 79569 ggtcgcggtggaagga 79554 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Minus Query: 1385 ggaagttgatgaggatgataggccatcaggttttgaggatgatctct 1431 ||||||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 79204 ggaagttgatgaggatgatggtccatcaggcttcgaggatgatctct 79158 Score = 54.0 bits (27), Expect = 0.003 Identities = 33/35 (94%) Strand = Plus / Minus Query: 860 gtctcccaggggaagacgaggtcgtggtggaagga 894 |||||| ||||||||||| |||||||||||||||| Sbjct: 79477 gtctccaaggggaagacgtggtcgtggtggaagga 79443 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Minus Query: 1677 aaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||||||| || || ||||||| || || |||||||||||||||||||||||| Sbjct: 76688 aaggatgttcttgcaaaagcaaaaactgggactggaaaaactgtagcattcttg 76635 Score = 46.1 bits (23), Expect = 0.82 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1094 gtctcccaggggaattcgtggccgtggtggaaggatgtc 1132 |||||| ||||||| ||||| ||||||||||||||||| Sbjct: 79477 gtctccaaggggaagacgtggtcgtggtggaaggatgtc 79439 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 70 accacctgcttggcttcctccgccgcgccgcggc 103 ||||||| || ||| ||||||||||||||||||| Sbjct: 85347 accacctcctcggcctcctccgccgcgccgcggc 85314
>ref|NM_001050125.1| Oryza sativa (japonica cultivar-group) Os01g0618400 (Os01g0618400) mRNA, complete cds Length = 2322 Score = 95.6 bits (48), Expect = 1e-15 Identities = 120/144 (83%) Strand = Plus / Plus Query: 1611 aaagctgctgggtatgaacggatgactgcggttcaggaggccactcttcctattatactt 1670 |||| ||||||||||||| ||||||| ||| |||||||| ||||| || | || ||| Sbjct: 490 aaagatgctgggtatgaaaggatgacccaggtgcaggaggcaactctgccagtaatcctt 549 Query: 1671 aaagggaaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||| || ||||| || || ||||||| |||||||||||| |||||||| || || ||| Sbjct: 550 caaggtaaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgcctttttg 609 Query: 1731 cttccagccattgaagttgtctcc 1754 |||||||||||||||||| ||||| Sbjct: 610 cttccagccattgaagttctctcc 633 Score = 61.9 bits (31), Expect = 1e-05 Identities = 127/159 (79%) Strand = Plus / Plus Query: 1944 aacccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacaca 2003 ||||| ||||||||||| || |||||||| ||||||||||| || ||| | ||||||||| Sbjct: 823 aacccatgccagattcttgttgctacacctggaaggcttaaagaccatgttgagaacaca 882 Query: 2004 ccaggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgc 2063 || || ||| |||| || | | || || || | ||| |||||||||||||||| ||| Sbjct: 883 cctggtttttctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgc 942 Query: 2064 ttgttagatatggggttccgaactgatattgagagaata 2102 || | |||||||| ||| ||| || |||||||||||| Sbjct: 943 ctgctggatatgggattcagaagagacattgagagaata 981 Score = 46.1 bits (23), Expect = 0.82 Identities = 41/47 (87%) Strand = Plus / Plus Query: 2502 gttagttctgatgtatctgctagaggtgttgattatcctaatgtcac 2548 |||||||||||||||||||| | || || ||||||||| ||||||| Sbjct: 1381 gttagttctgatgtatctgcccgcggcgtggattatcctgatgtcac 1427
>dbj|AK067570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L15, full insert sequence Length = 2325 Score = 95.6 bits (48), Expect = 1e-15 Identities = 120/144 (83%) Strand = Plus / Plus Query: 1611 aaagctgctgggtatgaacggatgactgcggttcaggaggccactcttcctattatactt 1670 |||| ||||||||||||| ||||||| ||| |||||||| ||||| || | || ||| Sbjct: 491 aaagatgctgggtatgaaaggatgacccaggtgcaggaggcaactctgccagtaatcctt 550 Query: 1671 aaagggaaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||| || ||||| || || ||||||| |||||||||||| |||||||| || || ||| Sbjct: 551 caaggtaaagatgttcttgcaaaagcaaagacaggaactgggaaaactgttgcctttttg 610 Query: 1731 cttccagccattgaagttgtctcc 1754 |||||||||||||||||| ||||| Sbjct: 611 cttccagccattgaagttctctcc 634 Score = 61.9 bits (31), Expect = 1e-05 Identities = 127/159 (79%) Strand = Plus / Plus Query: 1944 aacccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacaca 2003 ||||| ||||||||||| || |||||||| ||||||||||| || ||| | ||||||||| Sbjct: 824 aacccatgccagattcttgttgctacacctggaaggcttaaagaccatgttgagaacaca 883 Query: 2004 ccaggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgc 2063 || || ||| |||| || | | || || || | ||| |||||||||||||||| ||| Sbjct: 884 cctggtttttctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgc 943 Query: 2064 ttgttagatatggggttccgaactgatattgagagaata 2102 || | |||||||| ||| ||| || |||||||||||| Sbjct: 944 ctgctggatatgggattcagaagagacattgagagaata 982 Score = 46.1 bits (23), Expect = 0.82 Identities = 41/47 (87%) Strand = Plus / Plus Query: 2502 gttagttctgatgtatctgctagaggtgttgattatcctaatgtcac 2548 |||||||||||||||||||| | || || ||||||||| ||||||| Sbjct: 1382 gttagttctgatgtatctgcccgcggcgtggattatcctgatgtcac 1428
>ref|NM_001050126.1| Oryza sativa (japonica cultivar-group) Os01g0618500 (Os01g0618500) mRNA, complete cds Length = 2053 Score = 73.8 bits (37), Expect = 4e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 2472 gaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgctagaggtgtt 2531 ||||||| | ||||||||||||| || | || |||||||||||||||||| | |||||| Sbjct: 1199 gaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgtggtgtt 1258 Query: 2532 gattatcctaatgtcac 2548 ||||||||| ||||||| Sbjct: 1259 gattatcctgatgtcac 1275 Score = 69.9 bits (35), Expect = 6e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacc 2005 ||||| |||||||| || ||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 674 ccttgtcagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacc 732 Score = 61.9 bits (31), Expect = 1e-05 Identities = 109/135 (80%) Strand = Plus / Plus Query: 1611 aaagctgctgggtatgaacggatgactgcggttcaggaggccactcttcctattatactt 1670 |||| |||||| |||||| |||||| ||| |||||||| ||||| || || || ||| Sbjct: 356 aaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaataatcctt 415 Query: 1671 aaagggaaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||| | ||||| || || ||||||| |||||| || ||||||||||| || || ||| Sbjct: 416 caaggtgaagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgcctttttg 475 Query: 1731 cttccagccattgaa 1745 ||||||||||||||| Sbjct: 476 cttccagccattgaa 490 Score = 52.0 bits (26), Expect = 0.013 Identities = 38/42 (90%) Strand = Plus / Plus Query: 2130 acactcctattttctgctacagttccagatgaggttcgtcaa 2171 ||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 857 acacttcttttttctgctactgttccagaagaggttcgtcaa 898
>ref|NM_125758.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT5G63630) mRNA, complete cds Length = 1569 Score = 73.8 bits (37), Expect = 4e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 1935 atgcacacaaacccttgccagattctggtagctacaccgggaaggcttaaggatcatatg 1994 ||||| ||||| |||||||||||| | || |||||||| |||||||| || || ||||| Sbjct: 532 atgcaaacaaatccttgccagattttagtggctacacctggaaggctcaaagaccatatc 591 Query: 1995 gagaacacaccaggatttgctactagattgatgggcgtcaaattccttattcttgatgaa 2054 |||||||| ||||| ||||| || || || | ||| || ||| ||||| | ||||||||| Sbjct: 592 gagaacacgccaggctttgcaacgaggttaaagggtgtgaaagtccttgtgcttgatgaa 651 Query: 2055 gctga 2059 ||||| Sbjct: 652 gctga 656 Score = 71.9 bits (36), Expect = 1e-08 Identities = 96/116 (82%) Strand = Plus / Plus Query: 1632 atgactgcggttcaggaggccactcttcctattatacttaaagggaaggatgtcctggcc 1691 ||||||| |||||||| || ||||| ||||| || || ||||| ||||||||||| || Sbjct: 229 atgactgttgttcaggaagctactctccctataattctcaaaggcaaggatgtcctagct 288 Query: 1692 aaagcaaggacaggaactggaaaaactgtagcattcttgcttccagccattgaagt 1747 || || | ||||||||||| ||||||||||| || ||||||||| | |||||||| Sbjct: 289 aaggccaaaacaggaactgggaaaactgtagcgtttttgcttccatcaattgaagt 344 Score = 44.1 bits (22), Expect = 3.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2508 tctgatgtatctgctagaggtgttgattatcctaatgt 2545 ||||||||||||||| |||| |||||||| ||| |||| Sbjct: 1105 tctgatgtatctgctcgaggagttgattaccctgatgt 1142 Score = 44.1 bits (22), Expect = 3.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2646 ttgttggcaccatgggaagaatactt 2671 ||||||||||||||||| |||||||| Sbjct: 1243 ttgttggcaccatgggaggaatactt 1268
>ref|NM_120949.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT5G08620) mRNA, complete cds Length = 1887 Score = 73.8 bits (37), Expect = 4e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 |||||||||||||| || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 705 ccttgccagattctcgtggctacacccggaaggctcaaagaccatatcgacaacacttct 764 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 |||||||| || || |||||||| || ||| ||||| | |||||||||||||| Sbjct: 765 ggatttgcaacaaggttgatgggtgtgaaagtccttgtgcttgatgaagctga 817 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 |||||||| |||||||| ||| | ||||| |||||||| || |||||||| || || Sbjct: 1335 gacagggaacaatatatacatagacttggcagaactgggcggaaaggtaaggaaggagaa 1394 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 ||||| ||||||||||||| |||||||| ||||| Sbjct: 1395 ggtgtactattgttggcaccgtgggaagagtactt 1429
>gb|AY142638.1| Arabidopsis thaliana RNA helicase (At5g08620) mRNA, complete cds Length = 1723 Score = 73.8 bits (37), Expect = 4e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 |||||||||||||| || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 622 ccttgccagattctcgtggctacacccggaaggctcaaagaccatatcgacaacacttct 681 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 |||||||| || || |||||||| || ||| ||||| | |||||||||||||| Sbjct: 682 ggatttgcaacaaggttgatgggtgtgaaagtccttgtgcttgatgaagctga 734 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 |||||||| |||||||| ||| | ||||| |||||||| || |||||||| || || Sbjct: 1252 gacagggaacaatatatacatagacttggcagaactgggcggaaaggtaaggaaggagaa 1311 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 ||||| ||||||||||||| |||||||| ||||| Sbjct: 1312 ggtgtactattgttggcaccgtgggaagagtactt 1346
>gb|AY035114.1| Arabidopsis thaliana putative RNA helicase (At5g08620) mRNA, complete cds Length = 1894 Score = 73.8 bits (37), Expect = 4e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 |||||||||||||| || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 704 ccttgccagattctcgtggctacacccggaaggctcaaagaccatatcgacaacacttct 763 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 |||||||| || || |||||||| || ||| ||||| | |||||||||||||| Sbjct: 764 ggatttgcaacaaggttgatgggtgtgaaagtccttgtccttgatgaagctga 816 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 |||||||| |||||||| ||| | ||||| |||||||| || |||||||| || || Sbjct: 1334 gacagggaacaatatatacatagacttggcagaactgggcggaaaggtaaggaaggagaa 1393 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 ||||| ||||||||||||| |||||||| ||||| Sbjct: 1394 ggtgtactattgttggcaccgtgggaagagtactt 1428
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 73.8 bits (37), Expect = 4e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 2472 gaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgctagaggtgtt 2531 ||||||| | ||||||||||||| || | || |||||||||||||||||| | |||||| Sbjct: 24600532 gaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgtggtgtt 24600591 Query: 2532 gattatcctaatgtcac 2548 ||||||||| ||||||| Sbjct: 24600592 gattatcctgatgtcac 24600608 Score = 65.9 bits (33), Expect = 9e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacc 2005 |||||||| || ||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 24599754 cagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacc 24599806 Score = 52.0 bits (26), Expect = 0.013 Identities = 119/150 (79%) Strand = Plus / Plus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacaccaggattt 2012 |||||||| || |||||||| ||||||||||| || ||| | ||||||||||| || ||| Sbjct: 24595868 cagattcttgttgctacacctggaaggcttaaagaccatgttgagaacacacctggtttt 24595927 Query: 2013 gctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgcttgttagat 2072 |||| || | | || || || | ||| |||||||||||||||| ||| || | ||| Sbjct: 24595928 tctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgcctgctggat 24595987 Query: 2073 atggggttccgaactgatattgagagaata 2102 ||||| ||| ||| || |||||||||||| Sbjct: 24595988 atgggattcagaagagacattgagagaata 24596017 Score = 48.1 bits (24), Expect = 0.21 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1347 tctgattctggttcatcagaggat 1370 |||||||||||||||||||||||| Sbjct: 4230675 tctgattctggttcatcagaggat 4230652 Score = 46.1 bits (23), Expect = 0.82 Identities = 41/47 (87%) Strand = Plus / Plus Query: 2502 gttagttctgatgtatctgctagaggtgttgattatcctaatgtcac 2548 |||||||||||||||||||| | || || ||||||||| ||||||| Sbjct: 24596656 gttagttctgatgtatctgcccgcggcgtggattatcctgatgtcac 24596702 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2044 ttcttgatgaagctgaccgcttgttagatatggg 2077 |||||||||||||||||||| | || |||||||| Sbjct: 24599845 ttcttgatgaagctgaccgcctattggatatggg 24599878
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 73.8 bits (37), Expect = 4e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 2472 gaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgctagaggtgtt 2531 ||||||| | ||||||||||||| || | || |||||||||||||||||| | |||||| Sbjct: 26495 gaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgtggtgtt 26554 Query: 2532 gattatcctaatgtcac 2548 ||||||||| ||||||| Sbjct: 26555 gattatcctgatgtcac 26571 Score = 65.9 bits (33), Expect = 9e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacc 2005 |||||||| || ||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 25717 cagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacc 25769 Score = 52.0 bits (26), Expect = 0.013 Identities = 119/150 (79%) Strand = Plus / Plus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacaccaggattt 2012 |||||||| || |||||||| ||||||||||| || ||| | ||||||||||| || ||| Sbjct: 21831 cagattcttgttgctacacctggaaggcttaaagaccatgttgagaacacacctggtttt 21890 Query: 2013 gctactagattgatgggcgtcaaattccttattcttgatgaagctgaccgcttgttagat 2072 |||| || | | || || || | ||| |||||||||||||||| ||| || | ||| Sbjct: 21891 tctacccgactaaaaggtgtgaaggttcttgttcttgatgaagctgatcgcctgctggat 21950 Query: 2073 atggggttccgaactgatattgagagaata 2102 ||||| ||| ||| || |||||||||||| Sbjct: 21951 atgggattcagaagagacattgagagaata 21980 Score = 46.1 bits (23), Expect = 0.82 Identities = 41/47 (87%) Strand = Plus / Plus Query: 2502 gttagttctgatgtatctgctagaggtgttgattatcctaatgtcac 2548 |||||||||||||||||||| | || || ||||||||| ||||||| Sbjct: 22619 gttagttctgatgtatctgcccgcggcgtggattatcctgatgtcac 22665 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2044 ttcttgatgaagctgaccgcttgttagatatggg 2077 |||||||||||||||||||| | || |||||||| Sbjct: 25808 ttcttgatgaagctgaccgcctattggatatggg 25841
>emb|AJ010477.1|ATH010477 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH31 Length = 885 Score = 73.8 bits (37), Expect = 4e-09 Identities = 103/125 (82%) Strand = Plus / Plus Query: 1935 atgcacacaaacccttgccagattctggtagctacaccgggaaggcttaaggatcatatg 1994 ||||| ||||| |||||||||||| | || |||||||| |||||||| || || ||||| Sbjct: 140 atgcaaacaaatccttgccagattttagtggctacacctggaaggctcaaagaccatatc 199 Query: 1995 gagaacacaccaggatttgctactagattgatgggcgtcaaattccttattcttgatgaa 2054 |||||||| ||||| ||||| || || || | ||| || ||| ||||| | ||||||||| Sbjct: 200 gagaacacgccaggctttgcaacgaggttaaagggtgtgaaagtccttgtgcttgatgaa 259 Query: 2055 gctga 2059 ||||| Sbjct: 260 gctga 264 Score = 44.1 bits (22), Expect = 3.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2508 tctgatgtatctgctagaggtgttgattatcctaatgt 2545 ||||||||||||||| |||| |||||||| ||| |||| Sbjct: 713 tctgatgtatctgctcgaggagttgattaccctgatgt 750 Score = 44.1 bits (22), Expect = 3.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2646 ttgttggcaccatgggaagaatactt 2671 ||||||||||||||||| |||||||| Sbjct: 851 ttgttggcaccatgggaggaatactt 876
>emb|AJ010473.1|ATH010473 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH25 Length = 1830 Score = 73.8 bits (37), Expect = 4e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 |||||||||||||| || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 636 ccttgccagattctcgtggctacacccggaaggctcaaagaccatatcgacaacacttct 695 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 |||||||| || || |||||||| || ||| ||||| | |||||||||||||| Sbjct: 696 ggatttgcaacaaggttgatgggtgtgaaagtccttgtgcttgatgaagctga 748 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 |||||||| |||||||| ||| | ||||| |||||||| || |||||||| || || Sbjct: 1266 gacagggaacaatatatacatagacttggcagaactgggcggaaaggtaaggaaggagaa 1325 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 ||||| ||||||||||||| |||||||| ||||| Sbjct: 1326 ggtgtactattgttggcaccgtgggaagagtactt 1360
>emb|BX829938.1|CNS0A00D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1799 Score = 73.8 bits (37), Expect = 4e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 |||||||||||||| || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 682 ccttgccagattctcgtggctacacccggaaggctcaaagaccatatcgacaacacttct 741 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 |||||||| || || |||||||| || ||| ||||| | |||||||||||||| Sbjct: 742 ggatttgcaacaaggttgatgggtgtgaaaatccttgtgcttgatgaagctga 794 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 |||||||| |||||||| ||| | ||||| |||||||| || |||||||| || || Sbjct: 1312 gacagggaacaatatatacatagacttggcagaactgggcggaaaggtaaggaaggagaa 1371 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 ||||| ||||||||||||| |||||||| ||||| Sbjct: 1372 ggtgtactattgttggcaccgtgggaagagtactt 1406
>dbj|AK067476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107O15, full insert sequence Length = 2054 Score = 73.8 bits (37), Expect = 4e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 2472 gaatttaaggaatcaaagggtcttattcttgttagttctgatgtatctgctagaggtgtt 2531 ||||||| | ||||||||||||| || | || |||||||||||||||||| | |||||| Sbjct: 1200 gaatttaggaaatcaaagggtctgatattagtgagttctgatgtatctgctcgtggtgtt 1259 Query: 2532 gattatcctaatgtcac 2548 ||||||||| ||||||| Sbjct: 1260 gattatcctgatgtcac 1276 Score = 69.9 bits (35), Expect = 6e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacc 2005 ||||| |||||||| || ||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 675 ccttgtcagattcttgttgctacaccgggaaggcttaaggatcatcttgagaatacacc 733 Score = 61.9 bits (31), Expect = 1e-05 Identities = 109/135 (80%) Strand = Plus / Plus Query: 1611 aaagctgctgggtatgaacggatgactgcggttcaggaggccactcttcctattatactt 1670 |||| |||||| |||||| |||||| ||| |||||||| ||||| || || || ||| Sbjct: 357 aaagatgctggatatgaaaagatgacccaggtgcaggaggcaactctgccaataatcctt 416 Query: 1671 aaagggaaggatgtcctggccaaagcaaggacaggaactggaaaaactgtagcattcttg 1730 |||| | ||||| || || ||||||| |||||| || ||||||||||| || || ||| Sbjct: 417 caaggtgaagatgttcttgcaaaagcaaagacagggacaggaaaaactgttgcctttttg 476 Query: 1731 cttccagccattgaa 1745 ||||||||||||||| Sbjct: 477 cttccagccattgaa 491 Score = 52.0 bits (26), Expect = 0.013 Identities = 38/42 (90%) Strand = Plus / Plus Query: 2130 acactcctattttctgctacagttccagatgaggttcgtcaa 2171 ||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 858 acacttcttttttctgctactgttccagaagaggttcgtcaa 899
>ref|NM_120948.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT5G08610) mRNA, complete cds Length = 2755 Score = 61.9 bits (31), Expect = 1e-05 Identities = 85/103 (82%) Strand = Plus / Plus Query: 1644 caggaggccactcttcctattatacttaaagggaaggatgtcctggccaaagcaaggaca 1703 |||||||| ||||||||||| || || |||| || |||||||| ||||| || | ||| Sbjct: 1271 caggaggctactcttcctatcattctccaaggtaaagatgtcctagccaaggccaaaaca 1330 Query: 1704 ggaactggaaaaactgtagcattcttgcttccagccattgaag 1746 || ||||| ||||| || ||||| ||||||||||| ||||||| Sbjct: 1331 ggcactggtaaaaccgttgcatttttgcttccagcaattgaag 1373 Score = 61.9 bits (31), Expect = 1e-05 Identities = 79/95 (83%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 ||||||||||| ||||| ||| | ||||| ||||| || || ||||| || || ||| Sbjct: 2204 gacagggagcagtatatacatagacttggcagaaccgggcggaaagggaaggaaggggaa 2263 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 || |||||||||||||||||||||||||| ||||| Sbjct: 2264 ggagtcttattgttggcaccatgggaagagtactt 2298 Score = 58.0 bits (29), Expect = 2e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 ||||||||||| || || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 1574 ccttgccagatccttgtggctacacctggaaggctcaaagaccatattgaaaacacttct 1633 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 ||||| || || ||||||||||| || ||| ||||| | ||||| |||||||| Sbjct: 1634 ggattcgcaacaagattgatgggtgtgaaagtccttgtgcttgacgaagctga 1686
>emb|AJ010474.1|ATH010474 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH26 Length = 1787 Score = 61.9 bits (31), Expect = 1e-05 Identities = 85/103 (82%) Strand = Plus / Plus Query: 1644 caggaggccactcttcctattatacttaaagggaaggatgtcctggccaaagcaaggaca 1703 |||||||| ||||||||||| || || |||| || |||||||| ||||| || | ||| Sbjct: 959 caggaggctactcttcctatcattctccaaggtaaagatgtcctagccaaggccaaaaca 1018 Query: 1704 ggaactggaaaaactgtagcattcttgcttccagccattgaag 1746 || ||||| ||||| || ||||| ||||||||||| ||||||| Sbjct: 1019 ggcactggtaaaaccgttgcatttttgcttccagcaattgaag 1061 Score = 58.0 bits (29), Expect = 2e-04 Identities = 92/113 (81%) Strand = Plus / Plus Query: 1947 ccttgccagattctggtagctacaccgggaaggcttaaggatcatatggagaacacacca 2006 ||||||||||| || || |||||||| |||||||| || || ||||| || ||||| | Sbjct: 1262 ccttgccagatccttgtggctacacctggaaggctcaaagaccatattgaaaacacttct 1321 Query: 2007 ggatttgctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 ||||| || || ||||||||||| || ||| ||||| | ||||| |||||||| Sbjct: 1322 ggattcgcaacaagattgatgggtgtgaaagtccttgtgcttgacgaagctga 1374
>dbj|AB006697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAH20 Length = 80970 Score = 61.9 bits (31), Expect = 1e-05 Identities = 79/95 (83%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 ||||||||||| ||||| ||| | ||||| ||||| || || ||||| || || ||| Sbjct: 60969 gacagggagcagtatatacatagacttggcagaaccgggcggaaagggaaggaaggggaa 61028 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 || |||||||||||||||||||||||||| ||||| Sbjct: 61029 ggagtcttattgttggcaccatgggaagagtactt 61063 Score = 61.9 bits (31), Expect = 1e-05 Identities = 88/107 (82%) Strand = Plus / Plus Query: 1953 cagattctggtagctacaccgggaaggcttaaggatcatatggagaacacaccaggattt 2012 |||||||| || |||||||| |||||||| || || ||||| || ||||| | |||||| Sbjct: 63400 cagattctcgtggctacacccggaaggctcaaagaccatatcgacaacacttctggattt 63459 Query: 2013 gctactagattgatgggcgtcaaattccttattcttgatgaagctga 2059 || || || |||||||| || ||| ||||| | |||||||||||||| Sbjct: 63460 gcaacaaggttgatgggtgtgaaagtccttgtgcttgatgaagctga 63506 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Plus Query: 2577 gacagggagcaatatatccatcgtcttggtagaactggccgcaaaggtaatgaggggagc 2636 |||||||| |||||||| ||| | ||||| |||||||| || |||||||| || || Sbjct: 64363 gacagggaacaatatatacatagacttggcagaactgggcggaaaggtaaggaaggagaa 64422 Query: 2637 ggtgtcttattgttggcaccatgggaagaatactt 2671 ||||| ||||||||||||| |||||||| ||||| Sbjct: 64423 ggtgtactattgttggcaccgtgggaagagtactt 64457 Score = 46.1 bits (23), Expect = 0.82 Identities = 77/95 (81%) Strand = Plus / Plus Query: 1965 gctacaccgggaaggcttaaggatcatatggagaacacaccaggatttgctactagattg 2024 |||||||| |||||||| || || ||||| || ||||| | ||||| || || |||||| Sbjct: 60032 gctacacctggaaggctcaaagaccatattgaaaacacttctggattcgcaacaagattg 60091 Query: 2025 atgggcgtcaaattccttattcttgatgaagctga 2059 ||||| || ||| ||||| | ||||| |||||||| Sbjct: 60092 atgggtgtgaaagtccttgtgcttgacgaagctga 60126 Score = 44.1 bits (22), Expect = 3.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 2508 tctgatgtatctgctagaggtgttgattatcctaatgt 2545 ||||||||||||||| | ||||||||||| ||| |||| Sbjct: 64192 tctgatgtatctgctcgtggtgttgattaccctgatgt 64229
>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5 Length = 89779 Score = 54.0 bits (27), Expect = 0.003 Identities = 78/95 (82%) Strand = Plus / Minus Query: 1965 gctacaccgggaaggcttaaggatcatatggagaacacaccaggatttgctactagattg 2024 |||||||| |||||||| || || ||||| |||||||| ||||| ||||| || || || Sbjct: 27168 gctacacctggaaggctcaaagaccatatcgagaacacgccaggctttgcaacgaggtta 27109 Query: 2025 atgggcgtcaaattccttattcttgatgaagctga 2059 | ||| || ||| ||||| | |||||||||||||| Sbjct: 27108 aagggtgtgaaagtccttgtgcttgatgaagctga 27074 Score = 44.1 bits (22), Expect = 3.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2646 ttgttggcaccatgggaagaatactt 2671 ||||||||||||||||| |||||||| Sbjct: 26211 ttgttggcaccatgggaggaatactt 26186 Score = 44.1 bits (22), Expect = 3.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 2508 tctgatgtatctgctagaggtgttgattatcctaatgt 2545 ||||||||||||||| |||| |||||||| ||| |||| Sbjct: 26446 tctgatgtatctgctcgaggagttgattaccctgatgt 26409
>emb|BX832919.1|CNS09Z0J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL22ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 557 Score = 54.0 bits (27), Expect = 0.003 Identities = 30/31 (96%) Strand = Plus / Plus Query: 2640 gtcttattgttggcaccatgggaagaatact 2670 |||||||||||||||||||||||||| |||| Sbjct: 64 gtcttattgttggcaccatgggaagagtact 94
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Minus Query: 2039 ccttattcttgatgaagctgaccgcttgttagatatggg 2077 |||||||||||||||||| || ||| ||||||||||||| Sbjct: 474227 ccttattcttgatgaagcagatcgcatgttagatatggg 474189 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2044 ttcttgatgaagctgaccgcttgttagatatggg 2077 ||||||||||||||||||| || |||||||||| Sbjct: 2026137 ttcttgatgaagctgaccgtatgctagatatggg 2026170
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 50.1 bits (25), Expect = 0.053 Identities = 34/37 (91%) Strand = Plus / Plus Query: 2041 ttattcttgatgaagctgaccgcttgttagatatggg 2077 ||||||||||||||||||| || ||||||||||||| Sbjct: 1148238 ttattcttgatgaagctgatcgtatgttagatatggg 1148274
>gb|DQ019638.1| Triticum aestivum DEAD-box ATPase-RNA-helicase (DRH1) mRNA, partial cds Length = 1571 Score = 50.1 bits (25), Expect = 0.053 Identities = 34/37 (91%) Strand = Plus / Plus Query: 2044 ttcttgatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||||||||| || | ||||||||||| Sbjct: 128 ttcttgatgaagctgaccgcatgcttgatatggggtt 164
>ref|NM_010028.2| Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked (Ddx3x), mRNA Length = 3186 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1114 gatgaagctgaccggatgttagatatggggtt 1145
>ref|XM_001060162.1| PREDICTED: Rattus norvegicus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked (Ddx3x), mRNA Length = 4641 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1124 gatgaagctgaccggatgttagatatggggtt 1155
>ref|XM_228701.4| PREDICTED: Rattus norvegicus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked (Ddx3x), mRNA Length = 4641 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1124 gatgaagctgaccggatgttagatatggggtt 1155
>ref|XM_981517.1| PREDICTED: Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked (Ddx3x), mRNA Length = 4309 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 802 gatgaagctgaccggatgttagatatggggtt 833
>ref|NM_126777.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding (AT2G07750) mRNA, complete cds Length = 2685 Score = 48.1 bits (24), Expect = 0.21 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2475 tttaaggaatcaaagggtcttattcttgttagttctgatgtatctgct 2522 |||||||||||||| | ||||||||||| | ||||||||||||||| Sbjct: 2056 tttaaggaatcaaatagacttattcttgtcacatctgatgtatctgct 2103
>gb|BC085914.1| Rattus norvegicus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked, mRNA (cDNA clone IMAGE:7107275) Length = 4652 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1196 gatgaagctgaccggatgttagatatggggtt 1227
>dbj|AK163250.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020006B14 product:DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked, full insert sequence Length = 2954 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1105 gatgaagctgaccggatgttagatatggggtt 1136
>dbj|AK140990.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130093B14 product:DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked, full insert sequence Length = 3203 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1131 gatgaagctgaccggatgttagatatggggtt 1162
>gb|AC004483.3| Arabidopsis thaliana chromosome 2 clone T12J2 map mi421, complete sequence Length = 85463 Score = 48.1 bits (24), Expect = 0.21 Identities = 42/48 (87%) Strand = Plus / Plus Query: 2475 tttaaggaatcaaagggtcttattcttgttagttctgatgtatctgct 2522 |||||||||||||| | ||||||||||| | ||||||||||||||| Sbjct: 57264 tttaaggaatcaaatagacttattcttgtcacatctgatgtatctgct 57311
>gb|AF366447.1|AF366447 Allium cepa clone AGF136 maintainer line sequence Length = 1266 Score = 48.1 bits (24), Expect = 0.21 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 2490 ggtcttattcttgttagttctgatgtatctgctagaggtgttgattatcctaatgt 2545 |||||||| || || ||||||||||| ||||| ||||| |||||||||||| |||| Sbjct: 650 ggtcttatactagtgagttctgatgt-tctgccagaggagttgattatcctgatgt 596
>emb|Z38117.1|MMDBRNAHL M.musculus mRNA for dead-box RNA helicase Length = 3185 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1114 gatgaagctgaccggatgttagatatggggtt 1145
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 48.1 bits (24), Expect = 0.21 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1347 tctgattctggttcatcagaggat 1370 |||||||||||||||||||||||| Sbjct: 68642 tctgattctggttcatcagaggat 68619
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 48.1 bits (24), Expect = 0.21 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1347 tctgattctggttcatcagaggat 1370 |||||||||||||||||||||||| Sbjct: 10445 tctgattctggttcatcagaggat 10422
>dbj|AB080116.1| Mesocricetus auratus DBX mRNA for RNA helicase, complete cds Length = 1989 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1039 gatgaagctgaccggatgttagatatggggtt 1070
>emb|AL833805.11| Mouse DNA sequence from clone RP23-158L19 on chromosome X, complete sequence Length = 118691 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 98834 gatgaagctgaccggatgttagatatggggtt 98865
>gb|L25126.1|MUSRNAHELI Mus musculus RNA helicase mRNA, complete cds Length = 2187 Score = 48.1 bits (24), Expect = 0.21 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2049 gatgaagctgaccgcttgttagatatggggtt 2080 |||||||||||||| |||||||||||||||| Sbjct: 1062 gatgaagctgaccggatgttagatatggggtt 1093
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 46.1 bits (23), Expect = 0.82 Identities = 32/35 (91%) Strand = Plus / Minus Query: 2502 gttagttctgatgtatctgctagaggtgttgatta 2536 |||| ||||||||| |||||||||||||| ||||| Sbjct: 53848 gttacttctgatgtttctgctagaggtgtggatta 53814
>ref|XM_845394.1| PREDICTED: Canis familiaris similar to raptor (LOC608378), mRNA Length = 4403 Score = 46.1 bits (23), Expect = 0.82 Identities = 26/27 (96%) Strand = Plus / Plus Query: 240 gaggacgaggccgacctcagcgactgg 266 ||||||||||||||||||| ||||||| Sbjct: 46 gaggacgaggccgacctcaccgactgg 72
>emb|CR378675.1| Photobacterium profundum SS9 chromosome 2; segment 1/7 Length = 349544 Score = 46.1 bits (23), Expect = 0.82 Identities = 38/43 (88%) Strand = Plus / Plus Query: 2040 cttattcttgatgaagctgaccgcttgttagatatggggttcc 2082 |||||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 238147 cttattctagatgaagctgaccgtatgttagagatgggtttcc 238189
>ref|XM_567279.1| Cryptococcus neoformans var. neoformans JEC21 RNA helicase (CNJ00220) partial mRNA Length = 2562 Score = 46.1 bits (23), Expect = 0.82 Identities = 32/35 (91%) Strand = Plus / Plus Query: 2502 gttagttctgatgtatctgctagaggtgttgatta 2536 |||| ||||||||| |||||||||||||| ||||| Sbjct: 1396 gttacttctgatgtttctgctagaggtgtggatta 1430
>emb|AL116643.1|CNS01DCB Botrytis cinerea strain T4 cDNA library Length = 600 Score = 46.1 bits (23), Expect = 0.82 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1915 tggctcttgagcagaaacgaatg 1937 ||||||||||||||||||||||| Sbjct: 566 tggctcttgagcagaaacgaatg 544
>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence Length = 215303 Score = 46.1 bits (23), Expect = 0.82 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1823 tgagcttgctgatcaggctgctg 1845 ||||||||||||||||||||||| Sbjct: 90289 tgagcttgctgatcaggctgctg 90267
>gb|AF082129.1|AF082129 Zea mays copia-like retrotransposon Sto-12, partial sequence Length = 1704 Score = 46.1 bits (23), Expect = 0.82 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1480 aatctgtctcttctgagtcggttgaacaggagagt 1514 |||||| |||||||||||||||| |||||||||| Sbjct: 813 aatctggctcttctgagtcggttacacaggagagt 847
>emb|CT010478.15| Mouse DNA sequence from clone RP23-356E7 on chromosome 12, complete sequence Length = 190917 Score = 46.1 bits (23), Expect = 0.82 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1823 tgagcttgctgatcaggctgctg 1845 ||||||||||||||||||||||| Sbjct: 118934 tgagcttgctgatcaggctgctg 118912
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 44.1 bits (22), Expect = 3.3 Identities = 34/38 (89%) Strand = Plus / Minus Query: 462 cgtggtggtcgattcggtggcgataggcgtggtggtcg 499 ||||||||||| |||||||| | | ||||||||||||| Sbjct: 720914 cgtggtggtcgtttcggtggtggtcggcgtggtggtcg 720877
>ref|XM_001221639.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05545) mRNA, complete cds Length = 1689 Score = 44.1 bits (22), Expect = 3.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2592 atccatcgtcttggtagaactggccg 2617 ||||||||| |||||||||||||||| Sbjct: 1408 atccatcgtattggtagaactggccg 1433
>ref|NM_001064300.1| Oryza sativa (japonica cultivar-group) Os06g0526700 (Os06g0526700) mRNA, complete cds Length = 936 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 70 accacctgcttggcttcctccgccgcgccgcggc 103 ||||||| || ||| ||||||||||||||||||| Sbjct: 11 accacctcctcggcctcctccgccgcgccgcggc 44
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 44.1 bits (22), Expect = 3.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 237 atcgaggacgaggccgacctcagcgactgg 266 ||||| ||||||||||||||| |||||||| Sbjct: 2521563 atcgacgacgaggccgacctcggcgactgg 2521592
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3219 ttctgtttcagtttcagttcag 3240 |||||||||||||||||||||| Sbjct: 21926 ttctgtttcagtttcagttcag 21905
>gb|AC132685.3| Mus musculus BAC clone RP23-278G24 from chromosome 7, complete sequence Length = 188989 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2133 ctcctattttctgctacagttc 2154 |||||||||||||||||||||| Sbjct: 119550 ctcctattttctgctacagttc 119571
>gb|AY278438.1| Drosophila triauraria internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and 2S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1352 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 124 tataattcgaataagcaaatcg 145
>gb|AY278436.1| Drosophila tani internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and 2S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1325 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 124 tataattcgaataagcaaatcg 145
>gb|AY278433.1| Drosophila subauraria internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and 2S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1326 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 122 tataattcgaataagcaaatcg 143
>gb|AY278429.1| Drosophila quadraria internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and 2S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1325 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 124 tataattcgaataagcaaatcg 145
>gb|AY278413.1| Drosophila biauraria internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and 2S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1326 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 124 tataattcgaataagcaaatcg 145
>gb|AY278411.1| Drosophila auraria internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and 2S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1325 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 124 tataattcgaataagcaaatcg 145
>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 171852 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2965 caaaataatcttccatcaaaat 2986 |||||||||||||||||||||| Sbjct: 5482 caaaataatcttccatcaaaat 5503
>emb|CR378678.1| Photobacterium profundum SS9 chromosome 2; segment 4/7 Length = 349527 Score = 44.1 bits (22), Expect = 3.3 Identities = 31/34 (91%) Strand = Plus / Minus Query: 2044 ttcttgatgaagctgaccgcttgttagatatggg 2077 |||| ||||||||||||||| ||||||| ||||| Sbjct: 340586 ttctggatgaagctgaccgcatgttagacatggg 340553
>gb|AF348900.1|AF348900 Drosophila subauraria strain SP 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 794 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 132 tataattcgaataagcaaatcg 153
>gb|AF348899.1|AF348899 Drosophila triauraria strain KG 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 793 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 135 tataattcgaataagcaaatcg 156
>gb|AF348898.1|AF348898 Drosophila auraria strain YX 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 793 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 135 tataattcgaataagcaaatcg 156
>gb|AF348897.1|AF348897 Drosophila quadraria strain NIG 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 793 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 135 tataattcgaataagcaaatcg 156
>gb|AF348896.1|AF348896 Drosophila triauraria strain YK 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 793 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 135 tataattcgaataagcaaatcg 156
>gb|AF348895.1|AF348895 Drosophila biauraria strain HP 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 793 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2814 tataattcgaataagcaaatcg 2835 |||||||||||||||||||||| Sbjct: 135 tataattcgaataagcaaatcg 156
>gb|AF001548.1|HUAF001548 Human Chromosome 16 BAC clone CIT987SK-A-815A9, complete sequence Length = 145831 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 353 caggggaggccgaagagggagg 374 |||||||||||||||||||||| Sbjct: 30152 caggggaggccgaagagggagg 30173 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 574,926,795 Number of extensions: 30979917 Number of successful extensions: 191820 Number of sequences better than 10.0: 71 Number of HSP's gapped: 191810 Number of HSP's successfully gapped: 172 Length of query: 3350 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 3326 Effective length of database: 18,499,340,271 Effective search space: 61528805741346 Effective search space used: 61528805741346 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
