ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf140j05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059117.1| Oryza sativa (japonica cultivar-group) Os04g0376500 (Os04g0376500) mRNA, complete cds Length = 1288 Score = 1146 bits (578), Expect = 0.0 Identities = 896/1002 (89%) Strand = Plus / Plus Query: 98 gggagggaagtcgttcctgcaggccatgtcgacggtcaccgaagaggcggcggtgccact 157 ||||| || |||||||||||||||| ||||||| |||||||| |||||| || ||| || Sbjct: 119 gggagcgaggtcgttcctgcaggccgtgtcgaccgtcaccgaggaggcgccgtcgccgct 178 Query: 158 ccgcgtcgtccagatggagggactggctgtcctgaagatcattaagcactgtgaggagtt 217 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 179 ccgcgtcgtgcagatggagggcctggctgtcctgaagatcattaagcactgtgaggagtt 238 Query: 218 tgcacctgctctggttacaggtcaactgcttggtttggatgttggtagtgttctggaagt 277 |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 239 tgcacctgctctagttacaggccaactgcttggtttggatgttggcagtgttctggaagt 298 Query: 278 gaccaactgttttcctttccctataagagaggacgacgaggaagctgatgcagatggtgc 337 || ||||||||||||||||| || ||||| || || || || || |||||||||||||| Sbjct: 299 aacgaactgttttcctttcccaatgagagaagatgatgaagaggcagatgcagatggtgc 358 Query: 338 gaactatcagcttgagatgatgaggtgcttgagggaggttaatgttgacaataacactgt 397 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 aaattatcagcttgagatgatgaggtgcttgagggaggttaatgttgacaataacactgt 418 Query: 398 tagatggtaccagtcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatt 457 | ||||||| || ||||||||||||||||||||||| || || || ||||||||||| || Sbjct: 419 tggatggtatcaatcttgcttgcttggatcttttcagactgtggaactgattgaaacgtt 478 Query: 458 tatgaactatcaggagaacatcaggcgatgcgtgtgtatcgtgtatgacccatctaggtc 517 |||||||||||||||||| ||| || |||| ||||| ||||| ||||||||||||||||| Sbjct: 479 tatgaactatcaggagaatatccggagatgtgtgtgcatcgtttatgacccatctaggtc 538 Query: 518 tagtcaaggagtgctagctcttaaagccctgaagctcacagactcttttatggatctgta 577 | ||| || || |||||||| || ||| |||| |||||||| || || |||||||| || Sbjct: 539 aaatcagggggttctagctctcaaggccttgaaactcacagattcattcatggatcttta 598 Query: 578 ccgcaacaatggtttaactggagagaagctaagggaaaagaaattgtcatgggttgatat 637 ||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 599 ccgtaacaatggtttaactggagagaagttaagagagaagaaattgtcatgggttgatat 658 Query: 638 tttcgaggagataccgattaaagtgtccaactcggcgcttgtcagtgccttcatgaagga 697 ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| ||| Sbjct: 659 ttttgaggagataccgattaaagtttccaactctgcacttgtcagtgccttcatgacgga 718 Query: 698 gctggaacctgagtcacctgtttcacagtgtgactttgaccgtcttaaattgtcgactgc 757 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 719 gctggaacctgaatcacctgtttcacagtgtgattttgaccgccttaaattgtcaactgc 778 Query: 758 accctttatggaaaggaacctagaatttatgattgggtgcatggatggtctttcatcaga 817 || || |||||||||||| | |||||| ||||||| |||||||||| |||||||||||| Sbjct: 779 tccattcatggaaaggaacttggaatttctgattggctgcatggatgatctttcatcaga 838 Query: 818 gcaaaacaagttccaatattactatcgcaacctaggaaggcaacagtcacagcaacaggc 877 ||| |||||||||||||||||||||||||| | ||| || ||||||||||| ||||| Sbjct: 839 gcagaacaagttccaatattactatcgcaatgtctcaagacagcagtcacagcagcaggc 898 Query: 878 atggcttcaaaagagaaggcaagagaacatgtcgagaaaggctgctggcgaggagccgtt 937 |||||| |||||||||||||||||||| ||| | ||||| |||||||| |||||||| || Sbjct: 899 atggctccaaaagagaaggcaagagaatatggcaagaaaagctgctggagaggagccatt 958 Query: 938 gccagaagaagatccatccaaccctatcttcaagccgcttcctgagccatcccgcttgga 997 |||||||||||| |||||||| || || ||||||||| |||||||||| || || ||||| Sbjct: 959 gccagaagaagacccatccaatcccattttcaagccgattcctgagccgtcacgtttgga 1018 Query: 998 gggttatctcgtaaccaatcagatctcgagttactgcaaccatatcaatggggttgctgg 1057 ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1019 gggttatcttgtaaccaatcagatctccagttactgcaaccatattaatggggttgctgg 1078 Query: 1058 ccagagtttcaacaggctatacttgatgaaggcgttgcagga 1099 |||| |||||||||||| ||||| |||||||| |||||||| Sbjct: 1079 tcagaatttcaacaggctctacttaatgaaggccttgcagga 1120 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ccgagcagccatggcgaatcc 88 ||||||||||||||||||||| Sbjct: 74 ccgagcagccatggcgaatcc 94
>dbj|AK103713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137H02, full insert sequence Length = 1289 Score = 1146 bits (578), Expect = 0.0 Identities = 896/1002 (89%) Strand = Plus / Plus Query: 98 gggagggaagtcgttcctgcaggccatgtcgacggtcaccgaagaggcggcggtgccact 157 ||||| || |||||||||||||||| ||||||| |||||||| |||||| || ||| || Sbjct: 120 gggagcgaggtcgttcctgcaggccgtgtcgaccgtcaccgaggaggcgccgtcgccgct 179 Query: 158 ccgcgtcgtccagatggagggactggctgtcctgaagatcattaagcactgtgaggagtt 217 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 ccgcgtcgtgcagatggagggcctggctgtcctgaagatcattaagcactgtgaggagtt 239 Query: 218 tgcacctgctctggttacaggtcaactgcttggtttggatgttggtagtgttctggaagt 277 |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 240 tgcacctgctctagttacaggccaactgcttggtttggatgttggcagtgttctggaagt 299 Query: 278 gaccaactgttttcctttccctataagagaggacgacgaggaagctgatgcagatggtgc 337 || ||||||||||||||||| || ||||| || || || || || |||||||||||||| Sbjct: 300 aacgaactgttttcctttcccaatgagagaagatgatgaagaggcagatgcagatggtgc 359 Query: 338 gaactatcagcttgagatgatgaggtgcttgagggaggttaatgttgacaataacactgt 397 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aaattatcagcttgagatgatgaggtgcttgagggaggttaatgttgacaataacactgt 419 Query: 398 tagatggtaccagtcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatt 457 | ||||||| || ||||||||||||||||||||||| || || || ||||||||||| || Sbjct: 420 tggatggtatcaatcttgcttgcttggatcttttcagactgtggaactgattgaaacgtt 479 Query: 458 tatgaactatcaggagaacatcaggcgatgcgtgtgtatcgtgtatgacccatctaggtc 517 |||||||||||||||||| ||| || |||| ||||| ||||| ||||||||||||||||| Sbjct: 480 tatgaactatcaggagaatatccggagatgtgtgtgcatcgtttatgacccatctaggtc 539 Query: 518 tagtcaaggagtgctagctcttaaagccctgaagctcacagactcttttatggatctgta 577 | ||| || || |||||||| || ||| |||| |||||||| || || |||||||| || Sbjct: 540 aaatcagggggttctagctctcaaggccttgaaactcacagattcattcatggatcttta 599 Query: 578 ccgcaacaatggtttaactggagagaagctaagggaaaagaaattgtcatgggttgatat 637 ||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||| Sbjct: 600 ccgtaacaatggtttaactggagagaagttaagagagaagaaattgtcatgggttgatat 659 Query: 638 tttcgaggagataccgattaaagtgtccaactcggcgcttgtcagtgccttcatgaagga 697 ||| |||||||||||||||||||| |||||||| || ||||||||||||||||||| ||| Sbjct: 660 ttttgaggagataccgattaaagtttccaactctgcacttgtcagtgccttcatgacgga 719 Query: 698 gctggaacctgagtcacctgtttcacagtgtgactttgaccgtcttaaattgtcgactgc 757 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 720 gctggaacctgaatcacctgtttcacagtgtgattttgaccgccttaaattgtcaactgc 779 Query: 758 accctttatggaaaggaacctagaatttatgattgggtgcatggatggtctttcatcaga 817 || || |||||||||||| | |||||| ||||||| |||||||||| |||||||||||| Sbjct: 780 tccattcatggaaaggaacttggaatttctgattggctgcatggatgatctttcatcaga 839 Query: 818 gcaaaacaagttccaatattactatcgcaacctaggaaggcaacagtcacagcaacaggc 877 ||| |||||||||||||||||||||||||| | ||| || ||||||||||| ||||| Sbjct: 840 gcagaacaagttccaatattactatcgcaatgtctcaagacagcagtcacagcagcaggc 899 Query: 878 atggcttcaaaagagaaggcaagagaacatgtcgagaaaggctgctggcgaggagccgtt 937 |||||| |||||||||||||||||||| ||| | ||||| |||||||| |||||||| || Sbjct: 900 atggctccaaaagagaaggcaagagaatatggcaagaaaagctgctggagaggagccatt 959 Query: 938 gccagaagaagatccatccaaccctatcttcaagccgcttcctgagccatcccgcttgga 997 |||||||||||| |||||||| || || ||||||||| |||||||||| || || ||||| Sbjct: 960 gccagaagaagacccatccaatcccattttcaagccgattcctgagccgtcacgtttgga 1019 Query: 998 gggttatctcgtaaccaatcagatctcgagttactgcaaccatatcaatggggttgctgg 1057 ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 1020 gggttatcttgtaaccaatcagatctccagttactgcaaccatattaatggggttgctgg 1079 Query: 1058 ccagagtttcaacaggctatacttgatgaaggcgttgcagga 1099 |||| |||||||||||| ||||| |||||||| |||||||| Sbjct: 1080 tcagaatttcaacaggctctacttaatgaaggccttgcagga 1121 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ccgagcagccatggcgaatcc 88 ||||||||||||||||||||| Sbjct: 75 ccgagcagccatggcgaatcc 95
>dbj|AK061349.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F07, full insert sequence Length = 1158 Score = 1134 bits (572), Expect = 0.0 Identities = 884/988 (89%) Strand = Plus / Plus Query: 112 tcctgcaggccatgtcgacggtcaccgaagaggcggcggtgccactccgcgtcgtccaga 171 ||||||||||| ||||||| |||||||| |||||| || ||| ||||||||||| |||| Sbjct: 1 tcctgcaggccgtgtcgaccgtcaccgaggaggcgccgtcgccgctccgcgtcgtgcaga 60 Query: 172 tggagggactggctgtcctgaagatcattaagcactgtgaggagtttgcacctgctctgg 231 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 61 tggagggcctggctgtcctgaagatcattaagcactgtgaggagtttgcacctgctctag 120 Query: 232 ttacaggtcaactgcttggtttggatgttggtagtgttctggaagtgaccaactgttttc 291 ||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||| Sbjct: 121 ttacaggccaactgcttggtttggatgttggcagtgttctggaagtaacgaactgttttc 180 Query: 292 ctttccctataagagaggacgacgaggaagctgatgcagatggtgcgaactatcagcttg 351 ||||||| || ||||| || || || || || |||||||||||||| || |||||||||| Sbjct: 181 ctttcccaatgagagaagatgatgaagaggcagatgcagatggtgcaaattatcagcttg 240 Query: 352 agatgatgaggtgcttgagggaggttaatgttgacaataacactgttagatggtaccagt 411 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | Sbjct: 241 agatgatgaggtgcttgagggaggttaatgttgacaataacactgttggatggtatcaat 300 Query: 412 cttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatttatgaactatcagg 471 |||||||||||||||||||||| || || || ||||||||||| |||||||||||||||| Sbjct: 301 cttgcttgcttggatcttttcagactgtggaactgattgaaacgtttatgaactatcagg 360 Query: 472 agaacatcaggcgatgcgtgtgtatcgtgtatgacccatctaggtctagtcaaggagtgc 531 |||| ||| || |||| ||||| ||||| ||||||||||||||||| | ||| || || | Sbjct: 361 agaatatccggagatgtgtgtgcatcgtttatgacccatctaggtcaaatcagggggttc 420 Query: 532 tagctcttaaagccctgaagctcacagactcttttatggatctgtaccgcaacaatggtt 591 ||||||| || ||| |||| |||||||| || || |||||||| ||||| |||||||||| Sbjct: 421 tagctctcaaggccttgaaactcacagattcattcatggatctttaccgtaacaatggtt 480 Query: 592 taactggagagaagctaagggaaaagaaattgtcatgggttgatattttcgaggagatac 651 |||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 481 taactggagagaagttaagagagaagaaattgtcatgggttgatatttttgaggagatac 540 Query: 652 cgattaaagtgtccaactcggcgcttgtcagtgccttcatgaaggagctggaacctgagt 711 |||||||||| |||||||| || ||||||||||||||||||| ||||||||||||||| | Sbjct: 541 cgattaaagtttccaactctgcacttgtcagtgccttcatgacggagctggaacctgaat 600 Query: 712 cacctgtttcacagtgtgactttgaccgtcttaaattgtcgactgcaccctttatggaaa 771 ||||||||||||||||||| |||||||| ||||||||||| ||||| || || ||||||| Sbjct: 601 cacctgtttcacagtgtgattttgaccgccttaaattgtcaactgctccattcatggaaa 660 Query: 772 ggaacctagaatttatgattgggtgcatggatggtctttcatcagagcaaaacaagttcc 831 ||||| | |||||| ||||||| |||||||||| ||||||||||||||| |||||||||| Sbjct: 661 ggaacttggaatttctgattggctgcatggatgatctttcatcagagcagaacaagttcc 720 Query: 832 aatattactatcgcaacctaggaaggcaacagtcacagcaacaggcatggcttcaaaaga 891 |||||||||||||||| | ||| || ||||||||||| ||||||||||| ||||||| Sbjct: 721 aatattactatcgcaatgtctcaagacagcagtcacagcagcaggcatggctccaaaaga 780 Query: 892 gaaggcaagagaacatgtcgagaaaggctgctggcgaggagccgttgccagaagaagatc 951 ||||||||||||| ||| | ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 781 gaaggcaagagaatatggcaagaaaagctgctggagaggagccattgccagaagaagacc 840 Query: 952 catccaaccctatcttcaagccgcttcctgagccatcccgcttggagggttatctcgtaa 1011 ||||||| || || ||||||||| |||||||||| || || |||||||||||||| |||| Sbjct: 841 catccaatcccattttcaagccgattcctgagccgtcacgtttggagggttatcttgtaa 900 Query: 1012 ccaatcagatctcgagttactgcaaccatatcaatggggttgctggccagagtttcaaca 1071 ||||||||||||| ||||||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 901 ccaatcagatctccagttactgcaaccatattaatggggttgctggtcagaatttcaaca 960 Query: 1072 ggctatacttgatgaaggcgttgcagga 1099 |||| ||||| |||||||| |||||||| Sbjct: 961 ggctctacttaatgaaggccttgcagga 988
>gb|AY109988.1| Zea mays CL3444_1 mRNA sequence Length = 1334 Score = 716 bits (361), Expect = 0.0 Identities = 669/779 (85%) Strand = Plus / Minus Query: 107 gtcgttcctgcaggccatgtcgacggtcaccgaagaggcggcggtgccactccgcgtcgt 166 |||||||||||||||| |||| ||||||||||| ||| || || ||| ||||| ||||| Sbjct: 1208 gtcgttcctgcaggccgtgtctacggtcaccgaggagacgccgacgccgctccgtgtcgt 1149 Query: 167 ccagatggagggactggctgtcctgaagatcattaagcactgtgaggagtttgcacctgc 226 |||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1148 ccagatggagggcctggctgtactgaagatcattaagcactgtgaggagtttgcgcctgc 1089 Query: 227 tctggttacaggtcaactgcttggtttggatgttggtagtgttctggaagtgaccaactg 286 | | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1088 tttagttacaggtcaattgcttggtttggatgtcggtagtgttctggaagtgaccaactg 1029 Query: 287 ttttcctttccctataagagaggacgacgaggaagctgatgcagatggtgcgaactatca 346 |||||| |||||||| || || || || || ||||| |||||||||||||| || ||||| Sbjct: 1028 ttttccattccctatgagggaagaggatgatgaagcagatgcagatggtgccaattatca 969 Query: 347 gcttgagatgatgaggtgcttgagggaggttaatgttgacaataacactgttagatggta 406 |||||||||||||||||| |||||||| |||||||||||||| || ||| || ||||||| Sbjct: 968 gcttgagatgatgaggtgtttgagggaagttaatgttgacaacaatactattggatggta 909 Query: 407 ccagtcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatttatgaacta 466 |||| ||||||||||||| || || ||||||||||||||||||||||| Sbjct: 908 tcagtnnnnnnnnnnnngatcttttcaaactgtggaactgattgaaacatttatgaacta 849 Query: 467 tcaggagaacatcaggcgatgcgtgtgtatcgtgtatgacccatctaggtctagtcaagg 526 |||||||| ||| ||| |||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 848 tcaggagagcataaggagatgtgtgtgcattgtctatgacccatctagatctagtcaagg 789 Query: 527 agtgctagctcttaaagccctgaagctcacagactcttttatggatctgtaccgcaacaa 586 ||||||||||| |||||| | ||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 788 cgtgctagctctcaaagccttaaagcttacagactcgtttatggatctttaccgtaacaa 729 Query: 587 tggtttaactggagagaagctaagggaaaagaaattgtcatgggttgatattttcgagga 646 ||||||||| | | | |||| || ||||||||||| |||||||||| ||||| Sbjct: 728 tggtttaacctgctgcaggttaagagagaagaaattgtcctgggttgatannnnngagga 669 Query: 647 gataccgattaaagtgtccaactcggcgcttgtcagtgccttcatgaaggagctggaacc 706 |||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 668 gataccaataaaagtttccaactcagcgcttgtcagtgccttcatgaaggagctggaacc 609 Query: 707 tgagtcacctgtttcacagtgtgactttgaccgtcttaaattgtcgactgcaccctttat 766 ||| ||||||||| | ||||||||| | ||||| ||||||||||| |||| ||||| Sbjct: 608 tgaatcacctgttacccagtgtgacctggaccgacttaaattgtcaactgnnnnntttat 549 Query: 767 ggaaaggaacctagaatttatgattgggtgcatggatggtctttcatcagagcaaaacaa 826 |||||||||| | |||||| |||||||||||||||||| ||||||||||||||| ||||| Sbjct: 548 ggaaaggaacttggaatttctgattgggtgcatggatgatctttcatcagagcagaacaa 489 Query: 827 gttccaatattactatcgcaacctaggaaggcaacagtcacagcaacaggcatggcttc 885 |||||||||||| | ||||| || ||| |||||||||||||| ||||||||||||| Sbjct: 488 gttccaatattataaccgcaatctctcaagacaacagtcacagcagcaggcatggcttc 430 Score = 170 bits (86), Expect = 8e-39 Identities = 161/186 (86%) Strand = Plus / Minus Query: 921 gctggcgaggagccgttgccagaagaagatccatccaaccctatcttcaagccgcttcct 980 ||||| |||||||| | |||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 394 gctggtgaggagccactaccagaagaagatccatccaatcctatatttaagcctattcct 335 Query: 981 gagccatcccgcttggagggttatctcgtaaccaatcagatctcgagttactgcaaccat 1040 ||||| || || |||||||| ||||| ||||| |||||||||| ||||||||||||||| Sbjct: 334 gagccctcacgattggagggctatctagtaactaatcagatctgcagttactgcaaccat 275 Query: 1041 atcaatggggttgctggccagagtttcaacaggctatacttgatgaaggcgttgcaggaa 1100 ||||| ||||||||||| |||| |||| ||||||||||| |||||||||| ||||| || Sbjct: 274 atcaacggggttgctggtcagaatttcgacaggctatacctgatgaaggccttgcatgag 215 Query: 1101 gattag 1106 |||||| Sbjct: 214 gattag 209
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 192 bits (97), Expect = 2e-45 Identities = 112/117 (95%) Strand = Plus / Minus Query: 182 ggctgtcctgaagatcattaagcactgtgaggagtttgcacctgctctggttacaggtca 241 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 18414794 ggctgtcctgaagatcattaagcactgtgaggagtttgcacctgctctagttacaggcca 18414735 Query: 242 actgcttggtttggatgttggtagtgttctggaagtgaccaactgttttcctttccc 298 ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 18414734 actgcttggtttggatgttggcagtgttctggaagtaacgaactgttttcctttccc 18414678 Score = 174 bits (88), Expect = 5e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 894 aggcaagagaacatgtcgagaaaggctgctggcgaggagccgttgccagaagaagatcca 953 ||||||||||| ||| | ||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 18412174 aggcaagagaatatggcaagaaaagctgctggagaggagccattgccagaagaagaccca 18412115 Query: 954 tccaaccctatcttcaagccgcttcctgagccatcccgcttggagggttatctcgtaacc 1013 ||||| || || ||||||||| |||||||||| || || |||||||||||||| |||||| Sbjct: 18412114 tccaatcccattttcaagccgattcctgagccgtcacgtttggagggttatcttgtaacc 18412055 Query: 1014 aatcagatctcgagttactgcaaccatatcaatggg 1049 ||||||||||| ||||||||||||||||| |||||| Sbjct: 18412054 aatcagatctccagttactgcaaccatattaatggg 18412019 Score = 141 bits (71), Expect = 7e-30 Identities = 80/83 (96%) Strand = Plus / Minus Query: 324 gatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggaggttaatgtt 383 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 18414550 gatgcagatggtgcaaattatcagcttgagatgatgaggtgcttgagggaggttaatgtt 18414491 Query: 384 gacaataacactgttagatggta 406 ||||||||||||||| ||||||| Sbjct: 18414490 gacaataacactgttggatggta 18414468 Score = 115 bits (58), Expect = 4e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 722 acagtgtgactttgaccgtcttaaattgtcgactgcaccctttatggaaaggaacctaga 781 ||||||||| |||||||| ||||||||||| ||||| || || |||||||||||| | || Sbjct: 18412604 acagtgtgattttgaccgccttaaattgtcaactgctccattcatggaaaggaacttgga 18412545 Query: 782 atttatgattgggtgcatggatggtctttcatcagagcaaaacaag 827 |||| ||||||| |||||||||| ||||||||||||||| |||||| Sbjct: 18412544 atttctgattggctgcatggatgatctttcatcagagcagaacaag 18412499 Score = 115 bits (58), Expect = 4e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 468 caggagaacatcaggcgatgcgtgtgtatcgtgtatgacccatctaggtctagtcaagga 527 |||||||| ||| || |||| ||||| ||||| ||||||||||||||||| | ||| || Sbjct: 18413107 caggagaatatccggagatgtgtgtgcatcgtttatgacccatctaggtcaaatcagggg 18413048 Query: 528 gtgctagctcttaaagccctgaagctcacagactcttttatggatctgtaccgcaacaat 587 || |||||||| || ||| |||| |||||||| || || |||||||| ||||| |||||| Sbjct: 18413047 gttctagctctcaaggccttgaaactcacagattcattcatggatctttaccgtaacaat 18412988 Query: 588 ggtttaactggagagaag 605 |||||||||||||||||| Sbjct: 18412987 ggtttaactggagagaag 18412970 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 653 gattaaagtgtccaactcggcgcttgtcagtgccttcatgaaggagctggaacctgagtc 712 ||||||||| |||||||| || ||||||||||||||||||| ||||||||||||||| || Sbjct: 18412767 gattaaagtttccaactctgcacttgtcagtgccttcatgacggagctggaacctgaatc 18412708 Query: 713 acctgtttcacag 725 ||||||||||||| Sbjct: 18412707 acctgtttcacag 18412695 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Minus Query: 98 gggagggaagtcgttcctgcaggccatgtcgacggtcaccgaagaggcggcggtgccact 157 ||||| || |||||||||||||||| ||||||| |||||||| |||||| || ||| || Sbjct: 18415622 gggagcgaggtcgttcctgcaggccgtgtcgaccgtcaccgaggaggcgccgtcgccgct 18415563 Query: 158 ccgcgtcgtccagatggagggactgg 183 ||||||||| ||||||||||| |||| Sbjct: 18415562 ccgcgtcgtgcagatggagggcctgg 18415537 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 411 tcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatttatgaactatcag 470 ||||||||||||||||||||||| || || || ||||||||||| ||||||||||||||| Sbjct: 18413547 tcttgcttgcttggatcttttcagactgtggaactgattgaaacgtttatgaactatcag 18413488 Query: 471 g 471 | Sbjct: 18413487 g 18413487 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 826 agttccaatattactatcgcaacctaggaaggcaacagtcacagcaacaggcatggcttc 885 |||||||||||||||||||||| | ||| || ||||||||||| ||||||||||| | Sbjct: 18412409 agttccaatattactatcgcaatgtctcaagacagcagtcacagcagcaggcatggctcc 18412350 Query: 886 aaaagagaagg 896 ||||||||||| Sbjct: 18412349 aaaagagaagg 18412339 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 615 aagaaattgtcatgggttgatattttcgaggagataccg 653 |||||||||||||||||||||||||| |||||||||||| Sbjct: 18412881 aagaaattgtcatgggttgatatttttgaggagataccg 18412843 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1048 gggttgctggccagagtttcaacaggctatacttgatgaaggcgttgcagga 1099 |||||||||| |||| |||||||||||| ||||| |||||||| |||||||| Sbjct: 18411646 gggttgctggtcagaatttcaacaggctctacttaatgaaggccttgcagga 18411595
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 192 bits (97), Expect = 2e-45 Identities = 112/117 (95%) Strand = Plus / Minus Query: 182 ggctgtcctgaagatcattaagcactgtgaggagtttgcacctgctctggttacaggtca 241 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 116717 ggctgtcctgaagatcattaagcactgtgaggagtttgcacctgctctagttacaggcca 116658 Query: 242 actgcttggtttggatgttggtagtgttctggaagtgaccaactgttttcctttccc 298 ||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 116657 actgcttggtttggatgttggcagtgttctggaagtaacgaactgttttcctttccc 116601 Score = 174 bits (88), Expect = 5e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 894 aggcaagagaacatgtcgagaaaggctgctggcgaggagccgttgccagaagaagatcca 953 ||||||||||| ||| | ||||| |||||||| |||||||| |||||||||||||| ||| Sbjct: 114097 aggcaagagaatatggcaagaaaagctgctggagaggagccattgccagaagaagaccca 114038 Query: 954 tccaaccctatcttcaagccgcttcctgagccatcccgcttggagggttatctcgtaacc 1013 ||||| || || ||||||||| |||||||||| || || |||||||||||||| |||||| Sbjct: 114037 tccaatcccattttcaagccgattcctgagccgtcacgtttggagggttatcttgtaacc 113978 Query: 1014 aatcagatctcgagttactgcaaccatatcaatggg 1049 ||||||||||| ||||||||||||||||| |||||| Sbjct: 113977 aatcagatctccagttactgcaaccatattaatggg 113942 Score = 141 bits (71), Expect = 7e-30 Identities = 80/83 (96%) Strand = Plus / Minus Query: 324 gatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggaggttaatgtt 383 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 116473 gatgcagatggtgcaaattatcagcttgagatgatgaggtgcttgagggaggttaatgtt 116414 Query: 384 gacaataacactgttagatggta 406 ||||||||||||||| ||||||| Sbjct: 116413 gacaataacactgttggatggta 116391 Score = 115 bits (58), Expect = 4e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 722 acagtgtgactttgaccgtcttaaattgtcgactgcaccctttatggaaaggaacctaga 781 ||||||||| |||||||| ||||||||||| ||||| || || |||||||||||| | || Sbjct: 114527 acagtgtgattttgaccgccttaaattgtcaactgctccattcatggaaaggaacttgga 114468 Query: 782 atttatgattgggtgcatggatggtctttcatcagagcaaaacaag 827 |||| ||||||| |||||||||| ||||||||||||||| |||||| Sbjct: 114467 atttctgattggctgcatggatgatctttcatcagagcagaacaag 114422 Score = 115 bits (58), Expect = 4e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 468 caggagaacatcaggcgatgcgtgtgtatcgtgtatgacccatctaggtctagtcaagga 527 |||||||| ||| || |||| ||||| ||||| ||||||||||||||||| | ||| || Sbjct: 115030 caggagaatatccggagatgtgtgtgcatcgtttatgacccatctaggtcaaatcagggg 114971 Query: 528 gtgctagctcttaaagccctgaagctcacagactcttttatggatctgtaccgcaacaat 587 || |||||||| || ||| |||| |||||||| || || |||||||| ||||| |||||| Sbjct: 114970 gttctagctctcaaggccttgaaactcacagattcattcatggatctttaccgtaacaat 114911 Query: 588 ggtttaactggagagaag 605 |||||||||||||||||| Sbjct: 114910 ggtttaactggagagaag 114893 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 653 gattaaagtgtccaactcggcgcttgtcagtgccttcatgaaggagctggaacctgagtc 712 ||||||||| |||||||| || ||||||||||||||||||| ||||||||||||||| || Sbjct: 114690 gattaaagtttccaactctgcacttgtcagtgccttcatgacggagctggaacctgaatc 114631 Query: 713 acctgtttcacag 725 ||||||||||||| Sbjct: 114630 acctgtttcacag 114618 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Minus Query: 98 gggagggaagtcgttcctgcaggccatgtcgacggtcaccgaagaggcggcggtgccact 157 ||||| || |||||||||||||||| ||||||| |||||||| |||||| || ||| || Sbjct: 117545 gggagcgaggtcgttcctgcaggccgtgtcgaccgtcaccgaggaggcgccgtcgccgct 117486 Query: 158 ccgcgtcgtccagatggagggactgg 183 ||||||||| ||||||||||| |||| Sbjct: 117485 ccgcgtcgtgcagatggagggcctgg 117460 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 411 tcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatttatgaactatcag 470 ||||||||||||||||||||||| || || || ||||||||||| ||||||||||||||| Sbjct: 115470 tcttgcttgcttggatcttttcagactgtggaactgattgaaacgtttatgaactatcag 115411 Query: 471 g 471 | Sbjct: 115410 g 115410 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 826 agttccaatattactatcgcaacctaggaaggcaacagtcacagcaacaggcatggcttc 885 |||||||||||||||||||||| | ||| || ||||||||||| ||||||||||| | Sbjct: 114332 agttccaatattactatcgcaatgtctcaagacagcagtcacagcagcaggcatggctcc 114273 Query: 886 aaaagagaagg 896 ||||||||||| Sbjct: 114272 aaaagagaagg 114262 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 615 aagaaattgtcatgggttgatattttcgaggagataccg 653 |||||||||||||||||||||||||| |||||||||||| Sbjct: 114804 aagaaattgtcatgggttgatatttttgaggagataccg 114766 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1048 gggttgctggccagagtttcaacaggctatacttgatgaaggcgttgcagga 1099 |||||||||| |||| |||||||||||| ||||| |||||||| |||||||| Sbjct: 113569 gggttgctggtcagaatttcaacaggctctacttaatgaaggccttgcagga 113518
>ref|NM_202079.1| Arabidopsis thaliana TIF3H1; translation initiation factor (TIF3H1) mRNA, complete cds Length = 1471 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 366 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 425 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 426 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 485 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 486 gttaatgttgacaacaacactgtt 509
>ref|NM_100960.2| Arabidopsis thaliana TIF3H1; translation initiation factor (TIF3H1) mRNA, complete cds Length = 1489 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 384 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 443 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 444 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 503 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 504 gttaatgttgacaacaacactgtt 527
>gb|BT000765.1| Arabidopsis thaliana clone RAFL09-35-P08 (R18748) putative translation initiation factor (At1g10840) mRNA, complete cds Length = 1338 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 259 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 318 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 319 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 378 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 379 gttaatgttgacaacaacactgtt 402
>gb|AY081546.1| Arabidopsis thaliana unknown protein (T16B5.3) mRNA, complete cds Length = 1081 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 163 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 222 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 223 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 282 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 283 gttaatgttgacaacaacactgtt 306
>gb|AY054641.1| Arabidopsis thaliana Unknown protein (T16B5.3) mRNA, complete cds Length = 1352 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 314 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 373 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 374 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 433 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 434 gttaatgttgacaacaacactgtt 457
>gb|AY087338.1| Arabidopsis thaliana clone 34385 mRNA, complete sequence Length = 1428 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 382 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 441 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 442 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 501 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 502 gttaatgttgacaacaacactgtt 525
>gb|AF285833.1|AF285833 Arabidopsis thaliana eukaryotic initiation factor 3H1 subunit (TIF3H1) mRNA, complete cds Length = 1188 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 262 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 321 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 322 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 381 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 382 gttaatgttgacaacaacactgtt 405
>emb|BX815291.1|CNS0ACSB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 306 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 365 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 366 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 425 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 426 gttaatgttgacaacaacactgtt 449
>emb|BX815273.1|CNS0ACUP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 307 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 366 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 367 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 426 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 427 gttaatgttgacaacaacactgtt 450
>emb|BX815197.1|CNS0ACUS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1339 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 307 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 366 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 367 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 426 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 427 gttaatgttgacaacaacactgtt 450
>emb|BX816259.1|CNS0ADBH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1373 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 366 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 425 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 426 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 485 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 486 gttaatgttgacaacaacactgtt 509
>emb|BX815747.1|CNS0ACXZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS8ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 103 bits (52), Expect = 2e-18 Identities = 121/144 (84%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 307 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 366 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 367 gaagaaattgaagctgatggtgctaattatcagcttgagatgatgagatgtctgagggag 426 Query: 375 gttaatgttgacaataacactgtt 398 |||||||||||||| ||||||||| Sbjct: 427 gttaatgttgacaacaacactgtt 450
>gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 sequence, complete sequence Length = 70116 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 330 gatggtgcgaactatcagcttgagatgatgaggtgcttgagggaggttaatgttgacaat 389 |||||||| || |||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 5306 gatggtgctaattatcagcttgagatgatgagatgtctgagggaggttaatgttgacaac 5365 Query: 390 aacactgtt 398 ||||||||| Sbjct: 5366 aacactgtt 5374 Score = 48.1 bits (24), Expect = 0.078 Identities = 39/44 (88%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccc 298 ||||||||||| || || ||||| ||||| |||||||||||||| Sbjct: 5132 gatgttggtagcgtcctcgaagttaccaattgttttcctttccc 5175
>gb|AC146632.23| Medicago truncatula clone mth2-57b3, complete sequence Length = 139216 Score = 87.7 bits (44), Expect = 9e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 312 gacgaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagg 371 ||||||||| ||| || |||||||| || || |||||||| ||||||||||||||||| Sbjct: 130974 gacgaggaaattgaagctgatggtgccaattaccagcttgaaatgatgaggtgcttgaga 130915 Query: 372 gaggttaatgttgacaataacactgttagatggtac 407 ||||| ||||| |||||||| |||||| |||||||| Sbjct: 130914 gaggtcaatgtggacaataatactgttggatggtac 130879 Score = 50.1 bits (25), Expect = 0.020 Identities = 52/61 (85%) Strand = Plus / Minus Query: 403 ggtaccagtcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatttatga 462 ||||||||||| |||||||| || | |||||| || |||||||||||||| ||||||| Sbjct: 130739 ggtaccagtctacattgcttggctcctatcaaactgtggagctgattgaaacctttatga 130680 Query: 463 a 463 | Sbjct: 130679 a 130679 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Minus Query: 240 caactgcttggtttggatgttggtagtgttctggaagtgaccaactgttttccttt 295 ||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||||| Sbjct: 131144 caacttcttggattggatgttggcagtgttcttgaagttactaactgcttcccttt 131089
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 87.7 bits (44), Expect = 9e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 312 gacgaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagg 371 ||||||||| ||| || |||||||| || || |||||||| ||||||||||||||||| Sbjct: 109136 gacgaggaaattgaagctgatggtgccaattaccagcttgaaatgatgaggtgcttgaga 109195 Query: 372 gaggttaatgttgacaataacactgttagatggtac 407 ||||| ||||| |||||||| |||||| |||||||| Sbjct: 109196 gaggtcaatgtggacaataatactgttggatggtac 109231 Score = 50.1 bits (25), Expect = 0.020 Identities = 52/61 (85%) Strand = Plus / Plus Query: 403 ggtaccagtcttgcttgcttggatcttttcaaaccgtcgagctgattgaaacatttatga 462 ||||||||||| |||||||| || | |||||| || |||||||||||||| ||||||| Sbjct: 109371 ggtaccagtctacattgcttggctcctatcaaactgtggagctgattgaaacctttatga 109430 Query: 463 a 463 | Sbjct: 109431 a 109431 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Plus Query: 240 caactgcttggtttggatgttggtagtgttctggaagtgaccaactgttttccttt 295 ||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||||| Sbjct: 108966 caacttcttggattggatgttggcagtgttcttgaagttactaactgcttcccttt 109021
>emb|BX816676.1|CNS0AD3W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1289 Score = 79.8 bits (40), Expect = 2e-11 Identities = 118/144 (81%) Strand = Plus / Plus Query: 255 gatgttggtagtgttctggaagtgaccaactgttttcctttccctataagagaggacgac 314 ||||||||||| || || ||||| ||||| |||||||||||||| | || || || || Sbjct: 307 gatgttggtagcgtcctcgaagttaccaattgttttcctttcccggtcagggatgatgat 366 Query: 315 gaggaagctgatgcagatggtgcgaactatcagcttgagatgatgaggtgcttgagggag 374 || ||| ||| || |||||||| || || |||||||||||||||| || |||||||| Sbjct: 367 gaagaaattgaagctgatggtgctaatgatgagcttgagatgatgagatgtctgagggag 426 Query: 375 gttaatgttgacaataacactgtt 398 ||| |||||||||| ||||||||| Sbjct: 427 gttgatgttgacaacaacactgtt 450
>gb|BT013781.1| Lycopersicon esculentum clone 132671F, mRNA sequence Length = 1237 Score = 65.9 bits (33), Expect = 3e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 342 tatcagcttgagatgatgaggtgcttgagggaggttaatgttgacaataacac 394 ||||||||||| |||||||| ||| | |||||||||||||||||||| ||||| Sbjct: 314 tatcagcttgaaatgatgagatgcctaagggaggttaatgttgacaacaacac 366 Score = 58.0 bits (29), Expect = 8e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 594 actggagagaagctaagggaaaagaaattgtcatgggttgatattttcgaggagataccg 653 |||||||||||| | ||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 566 actggagagaagttgagggaaaagaatctttcatgggtcgacatcttcgaagagatacca 625 Query: 654 attaaagtgtccaactcggcgcttgtcagtgccttcatgaaggagctggaacctgagtca 713 ||||||| || |||||||| || | |||||||| |||| || || |||||||| || Sbjct: 626 tttaaagtttcaaactcggctctcataagtgcctttatgactgaacttgaacctgataca 685 Query: 714 cctgt 718 ||||| Sbjct: 686 cctgt 690 Score = 56.0 bits (28), Expect = 3e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 201 aagcactgtgaggagtttgcacctgctctggttacaggtcaactgcttggtttggatgtt 260 ||||| ||| |||||||| | || ||| |||| || || ||||| ||||| |||||||| Sbjct: 173 aagcattgtaaggagttttccccagctttggtcactgggcaacttcttgggttggatgtc 232 Query: 261 ggtagtgttctggaagtgaccaactgttttcc 292 || |||||||| ||||| || ||||||||||| Sbjct: 233 ggaagtgttcttgaagtcacaaactgttttcc 264
>dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45M12, TM0378b, complete sequence Length = 86433 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 918 gctgctggcgaggagccgttgccagaagaagatccatccaaccctatcttcaagccgctt 977 |||||||| |||||||| ||||| || |||||||| || ||||| || |||||||| || Sbjct: 76370 gctgctggggaggagcctttgcctgaggaagatccttcaaaccccattttcaagccacta 76311 Query: 978 cctgagccatcccgcttggag 998 ||||||||||| || |||||| Sbjct: 76310 cctgagccatcacggttggag 76290
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 918 gctgctggcgaggagccgttgccagaagaagatccatccaaccctatcttcaagccgctt 977 |||||||| |||||||| ||||| || |||||||| || ||||| || |||||||| || Sbjct: 50965 gctgctggggaggagcctttgcctgaggaagatccttcaaaccccattttcaagccacta 50906 Query: 978 cctgagccatcccgcttggag 998 ||||||||||| || |||||| Sbjct: 50905 cctgagccatcacggttggag 50885
>dbj|AP004471.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15H09, TM0005, complete sequence Length = 97710 Score = 65.9 bits (33), Expect = 3e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 918 gctgctggcgaggagccgttgccagaagaagatccatccaaccctatcttcaagccgctt 977 |||||||| |||||||| ||||| || |||||||| || ||||| || |||||||| || Sbjct: 80129 gctgctggggaggagcctttgcctgaggaagatccttcaaaccccattttcaagccacta 80070 Query: 978 cctgagccatcccgcttggag 998 ||||||||||| || |||||| Sbjct: 80069 cctgagccatcacggttggag 80049
>ref|NM_213167.1| Danio rerio zgc:85787 (zgc:85787), mRNA gb|BC068386.1| Danio rerio zgc:85787, mRNA (cDNA clone MGC:85787 IMAGE:6961124), complete cds Length = 3524 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1025 gagttactgcaaccatatcaatg 1047 ||||||||||||||||||||||| Sbjct: 977 gagttactgcaaccatatcaatg 999
>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete sequence Length = 189900 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1128 gagattttaacttaacactgtat 1150 ||||||||||||||||||||||| Sbjct: 122538 gagattttaacttaacactgtat 122516
>gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq23, complete sequence Length = 185893 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1199 ttttgttttgccaaaatgagata 1221 ||||||||||||||||||||||| Sbjct: 25022 ttttgttttgccaaaatgagata 25044
>ref|XM_517086.2| PREDICTED: Pan troglodytes brain neuron cytoplasmic protein 1, transcript variant 8 (LOC461091), mRNA Length = 4447 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 129 ggcagcgggagggaagtcgttc 108
>ref|XM_001154905.1| PREDICTED: Pan troglodytes brain neuron cytoplasmic protein 1, transcript variant 7 (LOC461091), mRNA Length = 4456 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 612 ggcagcgggagggaagtcgttc 591
>ref|XM_001154850.1| PREDICTED: Pan troglodytes brain neuron cytoplasmic protein 1, transcript variant 6 (LOC461091), mRNA Length = 3918 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 129 ggcagcgggagggaagtcgttc 108
>ref|NM_001040101.1| Homo sapiens DNA segment on chromosome 4 (unique) 234 expressed sequence (D4S234E), transcript variant 2, mRNA Length = 2635 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 129 ggcagcgggagggaagtcgttc 108
>ref|NM_014392.3| Homo sapiens DNA segment on chromosome 4 (unique) 234 expressed sequence (D4S234E), transcript variant 1, mRNA Length = 3124 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 129 ggcagcgggagggaagtcgttc 108
>gb|AC102341.10| Mus musculus chromosome 8, clone RP23-214E1, complete sequence Length = 187701 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 870 caacaggcatggcttcaaaagagaaggcaagaga 903 ||||||| |||||||||||||||| |||||||| Sbjct: 138211 caacaggactggcttcaaaagagaatgcaagaga 138178
>gb|AC161202.15| Mus musculus chromosome 8, clone RP23-479K12, complete sequence Length = 175459 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 269 tctggaagtgaccaactgttttcctt 294 ||||||||||||||||| |||||||| Sbjct: 162204 tctggaagtgaccaactcttttcctt 162229
>gb|AC110814.5| Homo sapiens BAC clone RP11-1338A7 from 4, complete sequence Length = 137723 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 39125 ggcagcgggagggaagtcgttc 39104
>dbj|AK125172.1| Homo sapiens cDNA FLJ43182 fis, clone FCBBF3018453, highly similar to NEURON SPECIFIC PROTEIN FAMILY MEMBER 1 Length = 2631 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 129 ggcagcgggagggaagtcgttc 108
>dbj|AK094573.1| Homo sapiens cDNA FLJ37254 fis, clone BRAMY2008583, highly similar to NEURON SPECIFIC PROTEIN FAMILY MEMBER 1 Length = 2988 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 1262 ggcagcgggagggaagtcgttc 1241
>gb|BC034227.1| Homo sapiens DNA segment on chromosome 4 (unique) 234 expressed sequence, mRNA (cDNA clone MGC:39635 IMAGE:5265974), complete cds Length = 3346 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 770 ggcagcgggagggaagtcgttc 749
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 cgccgccgaccaccgagcagcc 77 |||||||||||||||||||||| Sbjct: 5273512 cgccgccgaccaccgagcagcc 5273533
>gb|AC151909.5| Mus musculus BAC clone RP23-60H14 from chromosome 8, complete sequence Length = 208855 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Minus Query: 870 caacaggcatggcttcaaaagagaaggcaagaga 903 ||||||| |||||||||||||||| |||||||| Sbjct: 78084 caacaggactggcttcaaaagagaatgcaagaga 78051
>gb|AC127682.4| Mus musculus BAC clone RP24-170O17 from 8, complete sequence Length = 144298 Score = 44.1 bits (22), Expect = 1.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 870 caacaggcatggcttcaaaagagaaggcaagaga 903 ||||||| |||||||||||||||| |||||||| Sbjct: 15286 caacaggactggcttcaaaagagaatgcaagaga 15319
>gb|M98534.1|HUMNCLPR Human nuclear protein gene Length = 3216 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 ggcagcgggagggaagtcgttc 113 |||||||||||||||||||||| Sbjct: 1092 ggcagcgggagggaagtcgttc 1071
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 ccgcgccgccgaccaccgagcagcc 77 |||||||||||||||||| |||||| Sbjct: 3047784 ccgcgccgccgaccaccgcgcagcc 3047760
>ref|NM_011261.2| Mus musculus reelin (Reln), mRNA Length = 11702 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1016 tcagatctcgagttactgcaa 1036 ||||||||||||||||||||| Sbjct: 4180 tcagatctcgagttactgcaa 4160
>ref|XM_001223855.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_04642) mRNA, complete cds Length = 1692 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 304 gagaggacgacgaggaagctgatgc 328 ||||||||||||| ||||||||||| Sbjct: 197 gagaggacgacgatgaagctgatgc 221
>ref|NM_001053843.1| Oryza sativa (japonica cultivar-group) Os02g0594800 (Os02g0594800) mRNA, complete cds Length = 1845 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 catcctcccctccccgcgccg 29 ||||||||||||||||||||| Sbjct: 154 catcctcccctccccgcgccg 174
>ref|NM_001052610.1| Oryza sativa (japonica cultivar-group) Os02g0178200 (Os02g0178200) mRNA, complete cds Length = 1488 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgcgcctccgcgccgccgacc 66 ||||||||||||||||||||| Sbjct: 35 cgcgcctccgcgccgccgacc 55
>gb|DQ523078.1| Epipedobates hahneli isolate EhahnTCRd1 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 488 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gagaagctaagggaaaagaaattgt 624 |||||||||||||||||| |||||| Sbjct: 228 gagaagctaagggaaaagcaattgt 204
>gb|DQ523051.1| Epipedobates hahneli isolate EhahnChaz2B 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 426 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gagaagctaagggaaaagaaattgt 624 |||||||||||||||||| |||||| Sbjct: 166 gagaagctaagggaaaagcaattgt 142
>gb|DQ523049.1| Epipedobates hahneli isolate EhahnVSAiv3a 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 457 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gagaagctaagggaaaagaaattgt 624 |||||||||||||||||| |||||| Sbjct: 206 gagaagctaagggaaaagcaattgt 182
>gb|DQ523022.1| Epipedobates hahneli isolate EhahnTCRd2 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 489 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gagaagctaagggaaaagaaattgt 624 |||||||||||||||||| |||||| Sbjct: 227 gagaagctaagggaaaagcaattgt 203
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 gtcaactgcttggtttggatg 258 ||||||||||||||||||||| Sbjct: 3681339 gtcaactgcttggtttggatg 3681319
>ref|XM_359934.1| Magnaporthe grisea 70-15 hypothetical protein (MG04843.4) partial mRNA Length = 2178 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 924 ggcgaggagccgttgccagaa 944 ||||||||||||||||||||| Sbjct: 265 ggcgaggagccgttgccagaa 285
>gb|AY704216.1| Mus musculus reelin (Reln) mRNA, partial cds Length = 2241 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1016 tcagatctcgagttactgcaa 1036 ||||||||||||||||||||| Sbjct: 1291 tcagatctcgagttactgcaa 1271
>gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, complete sequence Length = 189619 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 ctggagagaagctaagggaaa 615 ||||||||||||||||||||| Sbjct: 127833 ctggagagaagctaagggaaa 127853
>gb|AF165146.6| Homo sapiens chromosome 8 clone CTA-397H3 map q12.1, complete sequence Length = 110554 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 atttatgaactatcaggagaa 475 ||||||||||||||||||||| Sbjct: 6363 atttatgaactatcaggagaa 6383
>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence Length = 216902 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 412 cttgcttgcttggatcttttcaaac 436 ||||||||||||||| ||||||||| Sbjct: 200918 cttgcttgcttggattttttcaaac 200894
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence Length = 275646 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1016 tcagatctcgagttactgcaa 1036 ||||||||||||||||||||| Sbjct: 211782 tcagatctcgagttactgcaa 211802
>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence Length = 257203 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1016 tcagatctcgagttactgcaa 1036 ||||||||||||||||||||| Sbjct: 53363 tcagatctcgagttactgcaa 53383
>gb|AC122339.3| Mus musculus BAC clone RP23-353L10 from chromosome 5, complete sequence Length = 203685 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 tgttctggaagtgaccaactg 286 ||||||||||||||||||||| Sbjct: 145846 tgttctggaagtgaccaactg 145866
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 acgaggaagctgatgcagatg 333 ||||||||||||||||||||| Sbjct: 77936 acgaggaagctgatgcagatg 77956
>gb|BC102096.1| Bos taurus eukaryotic translation initiation factor 3, subunit 3 (gamma), mRNA (cDNA clone MGC:127242 IMAGE:7946242), complete cds Length = 1223 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 accaactgttttcctttccct 299 ||||||||||||||||||||| Sbjct: 258 accaactgttttcctttccct 278
>gb|AC046176.13| Homo sapiens chromosome 8, clone RP11-446E9, complete sequence Length = 184349 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 atttatgaactatcaggagaa 475 ||||||||||||||||||||| Sbjct: 18723 atttatgaactatcaggagaa 18703
>gb|AC107376.7| Homo sapiens chromosome 8, clone CTA-397H3, complete sequence Length = 110554 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 atttatgaactatcaggagaa 475 ||||||||||||||||||||| Sbjct: 6364 atttatgaactatcaggagaa 6384
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgcgcctccgcgccgccgacc 66 ||||||||||||||||||||| Sbjct: 4320577 cgcgcctccgcgccgccgacc 4320597 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 catcctcccctccccgcgccg 29 ||||||||||||||||||||| Sbjct: 23085784 catcctcccctccccgcgccg 23085764
>emb|X16415.1|PPVCG Plum pox virus RNA genome Length = 9787 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 aagagaggacgacgaggaagctgatgcag 330 |||||||||||| ||||||| |||||||| Sbjct: 8588 aagagaggacgaggaggaagttgatgcag 8616
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 catcctcccctccccgcgccg 29 ||||||||||||||||||||| Sbjct: 52822 catcctcccctccccgcgccg 52802
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgcgcctccgcgccgccgacc 66 ||||||||||||||||||||| Sbjct: 4141 cgcgcctccgcgccgccgacc 4161
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgcgcctccgcgccgccgacc 66 ||||||||||||||||||||| Sbjct: 137391 cgcgcctccgcgccgccgacc 137411
>dbj|AK121953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107L05, full insert sequence Length = 1847 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 catcctcccctccccgcgccg 29 ||||||||||||||||||||| Sbjct: 156 catcctcccctccccgcgccg 176
>emb|BX465860.7| Zebrafish DNA sequence from clone DKEY-29L21 in linkage group 1, complete sequence Length = 153901 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 tttcctttccctataagagag 308 ||||||||||||||||||||| Sbjct: 105698 tttcctttccctataagagag 105678
>ref|NM_001025322.1| Bos taurus eukaryotic translation initiation factor 3, subunit 3 (gamma) (EIF3S3), mRNA gb|AY911332.1| Bos taurus clone IMAGE:7961471 eukaryotic translation initiation factor 3 subunit 3 gamma mRNA, complete cds Length = 1217 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 accaactgttttcctttccct 299 ||||||||||||||||||||| Sbjct: 250 accaactgttttcctttccct 270
>gb|AC011456.2|AC011456 Homo sapiens chromosome 19 clone CTC-360P9, complete sequence Length = 156357 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 ggaagtgaccaactgttttcc 292 ||||||||||||||||||||| Sbjct: 112985 ggaagtgaccaactgttttcc 112965
>dbj|AP003970.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-790I14, complete sequence Length = 168594 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tggagggactggctgtcctga 192 ||||||||||||||||||||| Sbjct: 85979 tggagggactggctgtcctga 85999
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 53 ccgcgccgccgaccaccgagcagcc 77 |||||||||||||||||| |||||| Sbjct: 1593694 ccgcgccgccgaccaccgcgcagcc 1593718
>gb|AC170597.2| Mus musculus BAC clone RP23-391A19 from chromosome 13, complete sequence Length = 223662 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ccagcacatcctcccctcccc 23 ||||||||||||||||||||| Sbjct: 9265 ccagcacatcctcccctcccc 9245
>gb|AC006629.1| Caenorhabditis elegans cosmid F12E12, complete sequence Length = 27659 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 817 agcaaaacaagttccaatatt 837 ||||||||||||||||||||| Sbjct: 24225 agcaaaacaagttccaatatt 24205
>emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chromosome 14, complete sequence Length = 186233 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 ctggagagaagctaagggaaa 615 ||||||||||||||||||||| Sbjct: 39234 ctggagagaagctaagggaaa 39214
>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence Length = 230437 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ccagcacatcctcccctcccc 23 ||||||||||||||||||||| Sbjct: 223777 ccagcacatcctcccctcccc 223757
>gb|U24703.1|MMU24703 Mus musculus reelin mRNA, complete cds Length = 11673 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1016 tcagatctcgagttactgcaa 1036 ||||||||||||||||||||| Sbjct: 4165 tcagatctcgagttactgcaa 4145
>gb|AC073434.42| Mus musculus strain C57BL/6J chromosome 9 clone rp23-159l13, complete sequence Length = 184073 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 aacatttatgaactatcagga 472 ||||||||||||||||||||| Sbjct: 76194 aacatttatgaactatcagga 76174
>dbj|D00298.1|PPVCP Plum pox potyvirus gene for polyprotein, capsid protein region, partial cds Length = 1232 Score = 42.1 bits (21), Expect = 4.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 aagagaggacgacgaggaagctgatgcag 330 |||||||||||| ||||||| |||||||| Sbjct: 33 aagagaggacgaggaggaagttgatgcag 61 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 225,833,081 Number of extensions: 12192002 Number of successful extensions: 234690 Number of sequences better than 10.0: 84 Number of HSP's gapped: 234684 Number of HSP's successfully gapped: 130 Length of query: 1260 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1237 Effective length of database: 18,503,978,556 Effective search space: 22889421473772 Effective search space used: 22889421473772 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
