ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf143h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120090:Os03g0217000 60 1e-09
2Os12g0407900:Os12g0407900 37 0.009
3AK058424:Os06g0294600 32 0.22
4AK106192:Os05g0230700 31 0.63
5AK105936:Os05g0230700 31 0.63
6AK102762:Os05g0230700 31 0.63
7Os06g0187500:Os06g0187500 29 1.8
8AK105309:Os05g0584900 28 5.3
9Os01g0718900:Os01g0718900 27 6.9
10Os12g0125700:Os12g0125700 27 9.0

>AK120090:Os03g0217000 |
          Length = 118
 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
 Frame = -2

Query: 339 MSATSCQSPFCFGLRLSRTSIPAFTAPLRALSAM-VIHHARFF---------XXXXXXXX 190
           MS TS QSPFC GLRLSRT++PAF A    LSAM   HHA FF                 
Sbjct: 1   MSVTSFQSPFCLGLRLSRTALPAFAASPNTLSAMAAAHHALFFPPPPPPPPPPPPPPPPA 60

Query: 189 XPIGGSVGRRFWQQK 145
              GGS+G   WQ+K
Sbjct: 61  GDPGGSLGELLWQRK 75



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>Os12g0407900:Os12g0407900 |
          Length = 459

 Score = 37.0 bits (84), Expect = 0.009
 Identities = 26/57 (45%), Positives = 28/57 (49%)
 Frame = -1

Query: 328 VLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAV 158
           V  VPLLLR +  PHV    H  A R L     P PLL       VAA  RLRR A+
Sbjct: 55  VAAVPLLLRRR--PHVALSFHLFATRRLLPSGSPPPLLLSVSAAHVAAASRLRRAAI 109



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>AK058424:Os06g0294600 |
          Length = 213

 Score = 32.3 bits (72), Expect = 0.22
 Identities = 25/63 (39%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = -1

Query: 298 QALPHVHPR---LHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAVLAAEGGSSPW 128
           QA PHV P    L R    PL HG P   L        V   RR RR+     EGG   W
Sbjct: 44  QAAPHVPPPRRPLRRPHVPPLRHGAPRDRLHPGRPARGVRRRRRRRRRRRGRQEGG---W 100

Query: 127 HGG 119
           H G
Sbjct: 101 HRG 103



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>AK106192:Os05g0230700 |
          Length = 128

 Score = 30.8 bits (68), Expect = 0.63
 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 15/52 (28%)
 Frame = -1

Query: 331 HVLPVPLLLRAQALPHVHP---RLHRAAA------------RPLGHGDPPRP 221
           H LP  L     A PHV P   RLHR  A            RP GH  PPRP
Sbjct: 20  HPLPHSLSGSCPAAPHVAPTRARLHRPLAAGARRRRCRRRQRPEGHRAPPRP 71



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>AK105936:Os05g0230700 |
          Length = 126

 Score = 30.8 bits (68), Expect = 0.63
 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 15/52 (28%)
 Frame = -1

Query: 331 HVLPVPLLLRAQALPHVHP---RLHRAAA------------RPLGHGDPPRP 221
           H LP  L     A PHV P   RLHR  A            RP GH  PPRP
Sbjct: 18  HPLPHSLSGSCPAAPHVAPTRARLHRPLAAGARRRRCRRRQRPEGHRAPPRP 69



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>AK102762:Os05g0230700 |
          Length = 118

 Score = 30.8 bits (68), Expect = 0.63
 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 15/52 (28%)
 Frame = -1

Query: 331 HVLPVPLLLRAQALPHVHP---RLHRAAA------------RPLGHGDPPRP 221
           H LP  L     A PHV P   RLHR  A            RP GH  PPRP
Sbjct: 10  HPLPHSLSGSCPAAPHVAPTRARLHRPLAAGARRRRCRRRQRPEGHRAPPRP 61



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>Os06g0187500:Os06g0187500 |
          Length = 548

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -1

Query: 331 HVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRL 173
           HV+  PL+ +     H+ P LH AAA  + HGD  R  L         A RRL
Sbjct: 62  HVVVFPLMSKG----HMIPLLHFAAALAVHHGDHLRVTLVTTPANLAFARRRL 110



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>AK105309:Os05g0584900 |
          Length = 377

 Score = 27.7 bits (60), Expect = 5.3
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = +2

Query: 230 WITMAERARSGAVKAGMDVRESLSPKQKGDWQDVALMSLSFAVYVYISQKIVCTYCAWVS 409
           W T+A    +  +   +DV   L       W  VALM+L  A+Y+    K+V  + A   
Sbjct: 12  WKTLASEPSTAFLHISLDVNHVLW------WVSVALMALVSAIYLL---KVVFYFEAVRR 62

Query: 410 MINH*LRINSY 442
             +H +R+N +
Sbjct: 63  EFHHPIRVNFF 73



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>Os01g0718900:Os01g0718900 |
          Length = 351

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 152 CQNRLPTEPPIXXXXXXXXXXKKRAWWITMAERARSGAVKAGMDVRESLSPKQKGDWQ 325
           C   LP +PP+           +++W +  AE    G   AG   R+S S  + G+ Q
Sbjct: 198 CPPPLPLQPPVVTRRRDTQPVPRQSWGLDAAEYVLGGCENAG--TRDSGSGAELGEEQ 253



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>Os12g0125700:Os12g0125700 |
          Length = 694

 Score = 26.9 bits (58), Expect = 9.0
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -1

Query: 325 LPVPLLLRAQALPHVHPR---LHRAAARPLGHGDPP 227
           LP P LL + + PH+ PR   L   +A P G   PP
Sbjct: 410 LPTPSLLPSCSSPHISPRSTPLPLTSATPCGVPHPP 445


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,561,021
Number of extensions: 253081
Number of successful extensions: 639
Number of sequences better than 10.0: 10
Number of HSP's gapped: 638
Number of HSP's successfully gapped: 10
Length of query: 186
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 91
Effective length of database: 11,595,960
Effective search space: 1055232360
Effective search space used: 1055232360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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