| Clone Name | FLbaf143h22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120090:Os03g0217000 | 60 | 1e-09 | 2 | Os12g0407900:Os12g0407900 | 37 | 0.009 | 3 | AK058424:Os06g0294600 | 32 | 0.22 | 4 | AK106192:Os05g0230700 | 31 | 0.63 | 5 | AK105936:Os05g0230700 | 31 | 0.63 | 6 | AK102762:Os05g0230700 | 31 | 0.63 | 7 | Os06g0187500:Os06g0187500 | 29 | 1.8 | 8 | AK105309:Os05g0584900 | 28 | 5.3 | 9 | Os01g0718900:Os01g0718900 | 27 | 6.9 | 10 | Os12g0125700:Os12g0125700 | 27 | 9.0 |
|---|
>AK120090:Os03g0217000 | Length = 118 Score = 60.1 bits (144), Expect = 1e-09 Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 10/75 (13%) Frame = -2 Query: 339 MSATSCQSPFCFGLRLSRTSIPAFTAPLRALSAM-VIHHARFF---------XXXXXXXX 190 MS TS QSPFC GLRLSRT++PAF A LSAM HHA FF Sbjct: 1 MSVTSFQSPFCLGLRLSRTALPAFAASPNTLSAMAAAHHALFFPPPPPPPPPPPPPPPPA 60 Query: 189 XPIGGSVGRRFWQQK 145 GGS+G WQ+K Sbjct: 61 GDPGGSLGELLWQRK 75
>Os12g0407900:Os12g0407900 | Length = 459 Score = 37.0 bits (84), Expect = 0.009 Identities = 26/57 (45%), Positives = 28/57 (49%) Frame = -1 Query: 328 VLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAV 158 V VPLLLR + PHV H A R L P PLL VAA RLRR A+ Sbjct: 55 VAAVPLLLRRR--PHVALSFHLFATRRLLPSGSPPPLLLSVSAAHVAAASRLRRAAI 109
>AK058424:Os06g0294600 | Length = 213 Score = 32.3 bits (72), Expect = 0.22 Identities = 25/63 (39%), Positives = 26/63 (41%), Gaps = 3/63 (4%) Frame = -1 Query: 298 QALPHVHPR---LHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAVLAAEGGSSPW 128 QA PHV P L R PL HG P L V RR RR+ EGG W Sbjct: 44 QAAPHVPPPRRPLRRPHVPPLRHGAPRDRLHPGRPARGVRRRRRRRRRRRGRQEGG---W 100 Query: 127 HGG 119 H G Sbjct: 101 HRG 103
>AK106192:Os05g0230700 | Length = 128 Score = 30.8 bits (68), Expect = 0.63 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 15/52 (28%) Frame = -1 Query: 331 HVLPVPLLLRAQALPHVHP---RLHRAAA------------RPLGHGDPPRP 221 H LP L A PHV P RLHR A RP GH PPRP Sbjct: 20 HPLPHSLSGSCPAAPHVAPTRARLHRPLAAGARRRRCRRRQRPEGHRAPPRP 71
>AK105936:Os05g0230700 | Length = 126 Score = 30.8 bits (68), Expect = 0.63 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 15/52 (28%) Frame = -1 Query: 331 HVLPVPLLLRAQALPHVHP---RLHRAAA------------RPLGHGDPPRP 221 H LP L A PHV P RLHR A RP GH PPRP Sbjct: 18 HPLPHSLSGSCPAAPHVAPTRARLHRPLAAGARRRRCRRRQRPEGHRAPPRP 69
>AK102762:Os05g0230700 | Length = 118 Score = 30.8 bits (68), Expect = 0.63 Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 15/52 (28%) Frame = -1 Query: 331 HVLPVPLLLRAQALPHVHP---RLHRAAA------------RPLGHGDPPRP 221 H LP L A PHV P RLHR A RP GH PPRP Sbjct: 10 HPLPHSLSGSCPAAPHVAPTRARLHRPLAAGARRRRCRRRQRPEGHRAPPRP 61
>Os06g0187500:Os06g0187500 | Length = 548 Score = 29.3 bits (64), Expect = 1.8 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = -1 Query: 331 HVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRL 173 HV+ PL+ + H+ P LH AAA + HGD R L A RRL Sbjct: 62 HVVVFPLMSKG----HMIPLLHFAAALAVHHGDHLRVTLVTTPANLAFARRRL 110
>AK105309:Os05g0584900 | Length = 377 Score = 27.7 bits (60), Expect = 5.3 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = +2 Query: 230 WITMAERARSGAVKAGMDVRESLSPKQKGDWQDVALMSLSFAVYVYISQKIVCTYCAWVS 409 W T+A + + +DV L W VALM+L A+Y+ K+V + A Sbjct: 12 WKTLASEPSTAFLHISLDVNHVLW------WVSVALMALVSAIYLL---KVVFYFEAVRR 62 Query: 410 MINH*LRINSY 442 +H +R+N + Sbjct: 63 EFHHPIRVNFF 73
>Os01g0718900:Os01g0718900 | Length = 351 Score = 27.3 bits (59), Expect = 6.9 Identities = 16/58 (27%), Positives = 25/58 (43%) Frame = +2 Query: 152 CQNRLPTEPPIXXXXXXXXXXKKRAWWITMAERARSGAVKAGMDVRESLSPKQKGDWQ 325 C LP +PP+ +++W + AE G AG R+S S + G+ Q Sbjct: 198 CPPPLPLQPPVVTRRRDTQPVPRQSWGLDAAEYVLGGCENAG--TRDSGSGAELGEEQ 253
>Os12g0125700:Os12g0125700 | Length = 694 Score = 26.9 bits (58), Expect = 9.0 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Frame = -1 Query: 325 LPVPLLLRAQALPHVHPR---LHRAAARPLGHGDPP 227 LP P LL + + PH+ PR L +A P G PP Sbjct: 410 LPTPSLLPSCSSPHISPRSTPLPLTSATPCGVPHPP 445 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 12,561,021 Number of extensions: 253081 Number of successful extensions: 639 Number of sequences better than 10.0: 10 Number of HSP's gapped: 638 Number of HSP's successfully gapped: 10 Length of query: 186 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 91 Effective length of database: 11,595,960 Effective search space: 1055232360 Effective search space used: 1055232360 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)