ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf143h22 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g11780:12003.t00979:unspliced-genomic expressed protein| Length = 607 Score = 129 bits (276), Expect(2) = 2e-30 Identities = 54/71 (76%), Positives = 56/71 (78%) Frame = +2 / +1 Query: 215 KKRAWWITMAERARSGAVKAGMDVRESLSPKQKGDWQDVALMSLSFAVYVYISQKIVCTY 394 K W MAER A KAG VRESLSPKQKGDW+DV LMS SFAVYVYISQKIVCTY Sbjct: 295 KSAWWAAAMAERVFGDAAKAGRAVRESLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTY 474 Query: 395 CAWVSMINH*L 427 CAW+SMINH*L Sbjct: 475 CAWISMINH*L 507 Score = 23.1 bits (44), Expect(2) = 2e-30 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +2 / +1 Query: 146 FCCQNRLPTEPP 181 F CQ+ P+EPP Sbjct: 196 FLCQSSSPSEPP 231 Score = 111 bits (238), Expect(2) = 3e-25 Identities = 55/83 (66%), Positives = 60/83 (72%) Frame = -2 / -3 Query: 462 KYM*LYM*ELILS**LIMETQAQYVHTIFWEM*T*TAKERLMSATSCQSPFCFGLRLSRT 283 +YM L + S**LIME QAQYVHTIF EM*T*TAKE+LMS TS QSPFC GLRLSRT Sbjct: 542 EYMQLLERYTVSS**LIMEIQAQYVHTIF*EM*T*TAKEKLMSVTSFQSPFCLGLRLSRT 363 Query: 282 SIPAFTAPLRALSAMVIHHARFF 214 ++PAF A LSAM H F Sbjct: 362 ALPAFAASPNTLSAMAAAHHALF 294 Score = 22.6 bits (43), Expect(2) = 3e-25 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = -2 / -3 Query: 180 GGSVGRRFWQQK 145 GGS+G WQ+K Sbjct: 230 GGSLGELLWQRK 195 Score = 57.4 bits (119), Expect(2) = 3e-12 Identities = 25/36 (69%), Positives = 25/36 (69%) Frame = -1 / -2 Query: 334 RHVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPP 227 R VLPVPLLL AQALPH P L R A PLGHG P Sbjct: 414 RDVLPVPLLLGAQALPHRPPGLRRVAEHPLGHGGGP 307 Score = 33.6 bits (67), Expect(2) = 3e-12 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = -1 / -2 Query: 424 LVIDHGDPGAVC 389 LVIDHGDPGA+C Sbjct: 504 LVIDHGDPGAIC 469 Score = 38.6 bits (78), Expect = 0.034 Identities = 18/27 (66%), Positives = 20/27 (74%) Frame = +1 / +3 Query: 379 DRVHILRLGLHDQSLAQN*FLHV*SHI 459 DRVHILRL LHDQSLA++ * HI Sbjct: 459 DRVHILRLDLHDQSLARHSISFQ*LHI 539 Score = 34.5 bits (69), Expect = 0.59 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +3 / +2 Query: 384 CAHTAPGSP*SITSSELILTCIVTY 458 CAH APGSP*SITS + +V Y Sbjct: 464 CAHIAPGSP*SITS*TQYIFPVVAY 538 Score = 32.2 bits (64), Expect = 2.9 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 / -1 Query: 425 ASD*SWRPRRSMCT 384 ASD*SWR RR+MCT Sbjct: 505 ASD*SWRSRRNMCT 464
>LOC_Os06g42770:12006.t03968:unspliced-genomic RNA binding protein, putative, expressed| Length = 2814 Score = 40.5 bits (82), Expect = 0.010 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = -1 / -2 Query: 316 PLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLL 215 P+ A+ LP HPRLHRA + P G PR LL Sbjct: 521 PVAAAARRLPPPHPRLHRARSAPCTAGSTPRSLL 420
>LOC_Os04g21060:12004.t01840:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2643 Score = 28.6 bits (56), Expect(2) = 0.033 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 / -2 Query: 61 PYHHRRRSTSLPSLETTSQ 117 P HHRRRST PS +T++ Sbjct: 2150 PPHHRRRSTPKPSPTSTAK 2094 Score = 27.6 bits (54), Expect(2) = 0.033 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +2 / -1 Query: 26 PPQDLSIHAMTSLTTTAAAP 85 PP+ L++ A S+TTT AAP Sbjct: 2247 PPEILALLARLSITTTPAAP 2188
>LOC_Os09g25540:12009.t02233:unspliced-genomic receptor-like protein kinase precursor, putative, expressed| Length = 3592 Score = 35.4 bits (71), Expect = 0.31 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = -1 / +3 Query: 304 RAQALPHVHPRLHRAAARPLGHGDPPRPL 218 R AL H H RLH A ARP PRP+ Sbjct: 288 RPSALQHEHQRLHPAGARPAAAPPVPRPV 374
>LOC_Os01g55410:12001.t04953:unspliced-genomic expressed protein| Length = 2898 Score = 35.4 bits (71), Expect = 0.31 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 / -3 Query: 7 RSHLEYPPSRSQHPCNDLPYHHRR 78 ++HL Y QHPCN YHH R Sbjct: 1666 KTHLPYSMMTGQHPCNRETYHHLR 1595
>LOC_Os12g05709:12012.t00459:unspliced-genomic F-box domain containing protein| Length = 1260 Score = 35.0 bits (70), Expect = 0.43 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = -1 / +3 Query: 334 RHVLPVPLLLRAQALPHVHPRLHRAAAR 251 RH P PLL RA ALP +H R R A R Sbjct: 132 RHTPPRPLLPRADALPPLHHRRRRPARR 215
>LOC_Os12g05609:12012.t00449:unspliced-genomic F-box domain containing protein| Length = 1260 Score = 35.0 bits (70), Expect = 0.43 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = -1 / +3 Query: 334 RHVLPVPLLLRAQALPHVHPRLHRAAAR 251 RH P PLL RA ALP +H R R A R Sbjct: 132 RHTPPRPLLPRADALPPLHHRRRRPARR 215
>LOC_Os11g06670:12011.t00559:unspliced-genomic expressed protein| Length = 3414 Score = 35.0 bits (70), Expect = 0.43 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = -1 / +2 Query: 316 PLLLRAQALPHVHPRLHRAAARPLGHGDPPRP 221 P RA LPH+ RL RA RPL PP P Sbjct: 146 PRAPRALQLPHLRRRLRRARRRPLPPPPPPTP 241
>LOC_Os11g35050:12011.t03054:unspliced-genomic expressed protein| Length = 5154 Score = 26.3 bits (51), Expect(2) = 0.47 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -1 / -3 Query: 292 LPHVHPRLHRAAAR 251 LPH HPR R+A R Sbjct: 406 LPHTHPRRRRSAPR 365 Score = 25.8 bits (50), Expect(2) = 0.47 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -1 / -1 Query: 328 VLPVPLLLRAQALPHV 281 VL +PL+LR + LPH+ Sbjct: 489 VLAIPLVLRLKQLPHL 442
>LOC_Os06g12580:12006.t01134:unspliced-genomic pro-resilin precursor, putative, expressed| Length = 3460 Score = 34.5 bits (69), Expect = 0.59 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -1 / +2 Query: 304 RAQALPHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAVL 155 RA+ L V P R RPL H PP P L + + LRR A+L Sbjct: 317 RARRLRRVRPHAVRRRLRPLHHLRPPAPALRRDLLPLLRSLHLLRRPALL 466
>LOC_Os05g42250:12005.t03761:unspliced-genomic cyclic nucleotide-gated ion channel 2, putative, expressed| Length = 4637 Score = 34.5 bits (69), Expect = 0.59 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 / -2 Query: 4 HRSHLEYPPSRSQHPCNDLPYHHRRRSTSLPSL 102 H + L+ PP QHP + +P+ H T+ P L Sbjct: 3925 HLAALQVPPHYEQHPLHRVPFSHNLHKTNQPHL 3827
>LOC_Os12g21930:12012.t01932:unspliced-genomic expressed protein| Length = 4191 Score = 33.6 bits (67), Expect = 1.1 Identities = 19/44 (43%), Positives = 20/44 (45%) Frame = -1 / +2 Query: 289 PHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAV 158 PHV H A R L P PLL VAA RLRR A+ Sbjct: 242 PHVALSFHLFATRRLLPSGSPPPLLLSVSAAHVAAASRLRRAAI 373
>LOC_Os11g33190:12011.t02913:unspliced-genomic F-box domain containing protein, expressed| Length = 2897 Score = 33.6 bits (67), Expect = 1.1 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -1 / -1 Query: 331 HVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPP 227 HV+P P +LR V +LH A R HG+PP Sbjct: 1277 HVVPPPPVLRVAVQERVGRQLHGEALRLHVHGEPP 1173
>LOC_Os03g13010:12003.t01097:unspliced-genomic ubiquitin-protein ligase, putative, expressed| Length = 2498 Score = 30.9 bits (61), Expect(2) = 1.4 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 271 LHRAAARPLGHGDPPR 224 LHR ARP+ G+PPR Sbjct: 860 LHRGGARPVAEGEPPR 813 Score = 23.1 bits (44), Expect(2) = 1.4 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -3 / -1 Query: 95 GRDVERRRWW*GRSLH 48 GR RR WW G L+ Sbjct: 110 GRGRGRREWWRGEKLN 63
>LOC_Os05g01380:12005.t00040:unspliced-genomic polygalacturonase inhibitor precursor, putative, expressed| Length = 1207 Score = 33.1 bits (66), Expect = 1.5 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = +2 / +3 Query: 263 AVKAGMDVRESLSPKQKGDWQDVALMSLSFAVYVYISQKIVCTYCAWVSMINH*LRINSY 442 A + +VR L Q+ + A SL + + I+ +V Y + S IN *+ I Y Sbjct: 894 AARRRREVRSVLLLPQQVPLRTAAPYSLQLSSHYLITSYVVKLYISNASKINK*IYIYIY 1073 Query: 443 MYSHIYL 463 +Y +IY+ Sbjct: 1074 IYIYIYI 1094
>LOC_Os05g10410:12005.t00876:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2917 Score = 32.7 bits (65), Expect = 2.1 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 / -3 Query: 356 VYVYISQKIVCTYCAWVSMINH*LRINSYMYSHIY 460 +Y+YI I+C Y + + H N+Y+Y +IY Sbjct: 2411 MYIYILYYIICIYMHNIYVFIHICYANAYVYRYIY 2307
>LOC_Os04g30200:12004.t02707:unspliced-genomic ubiquitin-protein ligase, putative, expressed| Length = 2335 Score = 32.7 bits (65), Expect = 2.1 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = -1 / +3 Query: 280 HPRLHRAAARPLGHGDPPRPLL 215 HPR+ RA A H DPPRP L Sbjct: 3 HPRIDRARAGAFLHRDPPRPHL 68
>LOC_Os01g28500:12001.t02544:unspliced-genomic pathogenesis-related protein PRMS precursor, putative, expressed| Length = 766 Score = 32.7 bits (65), Expect = 2.1 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 / -3 Query: 283 VHPRLHRAAARPLGHGDPPRPLL 215 VHPR HR RP+G G P +L Sbjct: 353 VHPRPHRVRGRPVGAGGAPEDVL 285
>LOC_Os12g37290:12012.t03409:unspliced-genomic resistance protein T10rga2-1A, putative| Length = 4143 Score = 32.2 bits (64), Expect = 2.9 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = -2 / +2 Query: 381 IFWEM*T*TAKERLMSATSCQSPFCFGLRLSRTSIPAFTAPLRALSAMVIHHARF 217 IFWE+ +*T ++ S C L TS+PA A LR LS + AR+ Sbjct: 1883 IFWEIKS*THARDASVPSAIISACCVSLPTRDTSLPARDASLRYLSVPRLAAARW 2047
>LOC_Os07g25810:12007.t02277:unspliced-genomic expressed protein| Length = 1681 Score = 32.2 bits (64), Expect = 2.9 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 / -1 Query: 310 LLRAQALPHVHPRLHRAAARPLGH 239 L R Q L H+H RLH+ RP GH Sbjct: 1258 LHRHQILHHLHHRLHQVRHRPQGH 1187
>LOC_Os02g08100:12002.t00706:unspliced-genomic 4-coumarate--CoA ligase 1, putative, expressed| Length = 5433 Score = 32.2 bits (64), Expect = 2.9 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +1 / +2 Query: 1 DHRSHLEYPPSRSQHPCNDLPYHHR 75 DHR H E R++ PC +HHR Sbjct: 1373 DHRDHAEV*SWRARRPCAQAQHHHR 1447
>LOC_Os01g26039:12001.t02313:unspliced-genomic acyltransferase/ catalytic, putative, expressed| Length = 9735 Score = 32.2 bits (64), Expect = 2.9 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -1 / -2 Query: 319 VPLLLRAQALPHVHPRLHRAAARPLGHGDPPRP 221 +PLLLR + H H R A RP G PP P Sbjct: 236 LPLLLRLRIHGHRHRRRPHGARRP*RRGGPPPP 138
>LOC_Os05g10990:12005.t00932:unspliced-genomic expressed protein| Length = 621 Score = 29.0 bits (57), Expect(2) = 3.2 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -1 / +2 Query: 274 RLHRAAARPLGHGDPPRPLL 215 R RAAARP G PP PLL Sbjct: 65 RRPRAAARPSPRGRPPPPLL 124 Score = 21.7 bits (41), Expect(2) = 3.2 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -1 / +3 Query: 172 RRKAVLAAEGGSSPWHGG 119 RR+ EGG HGG Sbjct: 363 RRRVHAGGEGGQHQQHGG 416
>LOC_Os06g19300:12006.t01751:unspliced-genomic cadmium tolerance factor, putative| Length = 3289 Score = 25.8 bits (50), Expect(2) = 3.8 Identities = 14/36 (38%), Positives = 14/36 (38%) Frame = +2 / +1 Query: 152 CQNRLPTEPPIXXXXXXXXXXKKRAWWITMAERARS 259 CQ PTEP I K R ERARS Sbjct: 1210 CQGEQPTEPSIATGSRRNPASKNREDSTDPVERARS 1317 Score = 23.1 bits (44), Expect(2) = 3.8 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +3 / +1 Query: 105 DDVATPPCQGEDP 143 D V PCQGE P Sbjct: 1189 DPVMPGPCQGEQP 1227
>LOC_Os07g24090:12007.t02106:unspliced-genomic mTERF family protein, expressed| Length = 1827 Score = 31.8 bits (63), Expect = 4.0 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -1 / +1 Query: 334 RHVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPP 227 RH+ PV LL + PH R+ ARP DPP Sbjct: 442 RHLEPVLALLPGRRHPHAQDRVLPPRARPHRRRDPP 549
>LOC_Os07g01214:12007.t00021:unspliced-genomic potassium transporter 16, putative, expressed| Length = 5776 Score = 31.8 bits (63), Expect = 4.0 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -1 / +3 Query: 277 PRLHRAAARPLGHGDP 230 PRLHR ARP+G G P Sbjct: 648 PRLHRRGARPVGQGPP 695
>LOC_Os06g02370:12006.t00130:unspliced-genomic expressed protein| Length = 4497 Score = 31.8 bits (63), Expect = 4.0 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 / -1 Query: 313 LLLRAQALPHVHPRLHRAAARPLGHGDPPRPL 218 L+L Q LPH PRL + R PP PL Sbjct: 462 LVLLLQRLPHAAPRLRQWLLRHCASSSPPPPL 367
>LOC_Os03g31700:12003.t02769:unspliced-genomic conserved hypothetical protein| Length = 1036 Score = 31.8 bits (63), Expect = 4.0 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = -1 / -3 Query: 325 LPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLL 215 LP P H+HPR R L H PP PLL Sbjct: 260 LPSPSSTTFHPRRHLHPRRRWPGLRRLHHHSPPPPLL 150
>LOC_Os03g28100:12003.t02483:unspliced-genomic conserved hypothetical protein| Length = 1396 Score = 24.9 bits (48), Expect(2) = 4.0 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -1 / -3 Query: 268 HRAAARPLGHGDPPR 224 HR AA HG PPR Sbjct: 1124 HRRAAMSSSHGTPPR 1080 Score = 24.0 bits (46), Expect(2) = 4.0 Identities = 7/10 (70%), Positives = 7/10 (70%) Frame = -3 / -2 Query: 95 GRDVERRRWW 66 GR RRRWW Sbjct: 981 GRKAARRRWW 952
>LOC_Os08g43410:12008.t04066:unspliced-genomic SHI, putative, expressed| Length = 1628 Score = 29.5 bits (58), Expect(2) = 4.3 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = -1 / -2 Query: 274 RLHRAAARPLGHGDPPRPLL 215 R HRAA RP PPRP L Sbjct: 1177 RRHRAAPRPCSGRSPPRPRL 1118 Score = 22.1 bits (42), Expect(2) = 4.3 Identities = 6/11 (54%), Positives = 8/11 (72%) Frame = -3 / -3 Query: 98 LGRDVERRRWW 66 +GR + RRWW Sbjct: 828 IGRSMYLRRWW 796
>LOC_Os12g03630:12012.t00255:unspliced-genomic expressed protein| Length = 4110 Score = 31.3 bits (62), Expect = 5.5 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +1 / +3 Query: 16 LEYPPSRSQHPCNDLPYHHRRRSTSLP 96 L +PP RS HPC HRRR P Sbjct: 75 LRWPPERSLHPCLPRHRLHRRRPGRRP 155
>LOC_Os11g44500:12011.t03978:unspliced-genomic ATP binding protein, putative, expressed| Length = 1894 Score = 31.3 bits (62), Expect = 5.5 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -1 / -1 Query: 304 RAQALPHVHPRLHRAAARPLGHGDPPRP 221 RA+A P H R RAAA P PP P Sbjct: 253 RARAPPGAHRRARRAAAGPPAAASPPGP 170
>LOC_Os11g15050:12011.t01335:unspliced-genomic hypothetical protein| Length = 1243 Score = 31.3 bits (62), Expect = 5.5 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 / +2 Query: 4 HRSHLEYPPSRSQHPCNDLPYHHRRRSTSLPSLETTS 114 H + L +HPC YHHRR +P TT+ Sbjct: 491 HVAILTVTSCHCRHPCAASSYHHRRS*PRVPPTSTTT 601
>LOC_Os11g03810:12011.t00271:unspliced-genomic secreted protein, putative| Length = 4009 Score = 31.3 bits (62), Expect = 5.5 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +1 / +1 Query: 16 LEYPPSRSQHPCNDLPYHHRRRSTSLP 96 L +PP RS HPC HRRR P Sbjct: 3805 LRWPPERSLHPCLPRHRLHRRRPGRRP 3885
>LOC_Os07g48910:12007.t04519:unspliced-genomic collagen-like protein 2, putative, expressed| Length = 1705 Score = 31.3 bits (62), Expect = 5.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -1 / -3 Query: 286 HVHPRLHRAAARPLGHGDPPRPLL 215 H+H HR +RP G P RPLL Sbjct: 194 HLHQSRHRRLSRPCPSGAPRRPLL 123
>LOC_Os03g40700:12003.t03493:unspliced-genomic presenilin, putative, expressed| Length = 2842 Score = 31.3 bits (62), Expect = 5.5 Identities = 17/42 (40%), Positives = 19/42 (45%) Frame = -1 / +3 Query: 289 PHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRK 164 PH HPRLH A R P PLL + RR RR+ Sbjct: 159 PHRHPRLHLHAPRRPPRLPPLLPLLPFPLHRRLLRRRRPRRR 284
>LOC_Os01g28450:12001.t02540:unspliced-genomic pathogenesis-related protein PRB1-2 precursor, putative, expressed| Length = 829 Score = 31.3 bits (62), Expect = 5.5 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -1 / -1 Query: 280 HPRLHRAAARPLGHGDPPRPLL 215 HPRLHRA RP+ G P +L Sbjct: 385 HPRLHRARRRPVPAGRTPEEVL 320
>LOC_Os04g35739:12004.t03244:unspliced-genomic glycine-rich protein, putative| Length = 603 Score = 24.9 bits (48), Expect(2) = 5.8 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -3 / +3 Query: 113 DVVSRLGRDVERRRWW 66 DVV R R RRRWW Sbjct: 318 DVVRRRRRRRWRRRWW 365 Score = 23.5 bits (45), Expect(2) = 5.8 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = -1 / +3 Query: 286 HVHPRLHRAAARPLGHGDPPRP 221 HV LHR R L PPRP Sbjct: 180 HVVHLLHRLLLRRLRPPPPPRP 245
>LOC_Os01g43140:12001.t03830:unspliced-genomic triacylglycerol lipase, putative, expressed| Length = 3798 Score = 24.0 bits (46), Expect(2) = 6.8 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -1 / -3 Query: 277 PRLHRAAARPLGHGDPPRPLL 215 P HR R G GDP P+L Sbjct: 3418 PDRHRRRRREHGAGDPRPPIL 3356 Score = 24.0 bits (46), Expect(2) = 6.8 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -1 / -2 Query: 190 AADRRLRRKAVLAAEGGSSPW 128 AA RR AA GG++PW Sbjct: 3350 AARRRAAATRSPAASGGAAPW 3288
>LOC_Os10g42770:12010.t03501:unspliced-genomic expressed protein| Length = 2215 Score = 30.9 bits (61), Expect = 7.5 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 / +2 Query: 301 AQALPHVHPRLHRAAARPLGHGDPPRP 221 A LP +HPR+HR AA G P P Sbjct: 140 AVPLPPLHPRIHRTAAPLAGGAPGPGP 220
>LOC_Os05g14300:12005.t01204:unspliced-genomic ubiquitin-conjugating enzyme E2, putative, expressed| Length = 5575 Score = 30.9 bits (61), Expect = 7.5 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +1 / -2 Query: 25 PPSRSQHPCNDLPYHHRRRSTSL 93 P RS HP N PYH STS+ Sbjct: 732 PNPRSNHPQNPKPYHQHDDSTSM 664
>LOC_Os04g40130:12004.t05429:unspliced-genomic rf1 protein, mitochondrial precursor, putative, expressed| Length = 2567 Score = 30.9 bits (61), Expect = 7.5 Identities = 15/36 (41%), Positives = 15/36 (41%) Frame = -1 / +3 Query: 334 RHVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPP 227 RHV P P L H P L R ARP PP Sbjct: 309 RHVPPPPPALHHHLQHHAPPPLLRREARPRARAPPP 416
>LOC_Os03g17900:12003.t01564:unspliced-genomic catalytic/ hydrolase, putative, expressed| Length = 5270 Score = 30.9 bits (61), Expect = 7.5 Identities = 19/61 (31%), Positives = 23/61 (37%) Frame = -1 / -2 Query: 331 HVLPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPRPLLXXXXXXSVAADRRLRRKAVLA 152 H P+P+LL P H R H P G+P + V RR RR A Sbjct: 334 HRPPLPILLLPPVPPAPHRRRHIRRRSPARAGEPHARVAHQRGQLLVPRHRRRRRHHAAA 155 Query: 151 A 149 A Sbjct: 154 A 152
>LOC_Os02g39220:12002.t03560:unspliced-genomic transposon protein, putative, unclassified| Length = 9597 Score = 30.9 bits (61), Expect = 7.5 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -1 / -3 Query: 169 RKAVLAAEGGSSPWHGG 119 R AA GSSPWHGG Sbjct: 364 RSTATAAPRGSSPWHGG 314
>LOC_Os01g55600:12001.t04970:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 2323 Score = 30.9 bits (61), Expect = 7.5 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = -1 / -2 Query: 325 LPVPLLLRAQALPHVHPRLHRAAARPLGHGDPPR 224 LP P L H H+A A PL HG PPR Sbjct: 1776 LPAPRGLHHGGRGHRRGAEHQAPADPLLHGQPPR 1675
>LOC_Os11g32240:12011.t02821:unspliced-genomic cytochrome P450 51, putative, expressed| Length = 4570 Score = 24.9 bits (48), Expect(3) = 7.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 / +2 Query: 322 PVPLLLRAQALPHVHPRLHRAAA 254 P P R + HPRLH+AAA Sbjct: 860 PKPPAHRRRGAAGGHPRLHQAAA 928 Score = 23.5 bits (45), Expect(3) = 7.7 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = -3 / +3 Query: 557 FFFFWTRTVFLYHLE 513 FFFF+ + F+ H+E Sbjct: 597 FFFFFQKVTFVCHVE 641 Score = 22.1 bits (42), Expect(3) = 7.7 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -3 / +1 Query: 92 RDVERRRWW*GRS 54 R RRRWW G S Sbjct: 964 RPSRRRRWWAGCS 1002 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 180,507,416 Number of extensions: 2690760 Number of successful extensions: 13804 Number of sequences better than 10.0: 46 Length of query: 186 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 138 Effective length of database: 52,912,542 Effective search space: 7301930796 Effective search space used: 7301930796 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
